HEADER TRANSFERASE/DNA 12-JUL-11 3SV3 TITLE CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM TITLE 2 THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH THE ARTIFICIAL TITLE 3 BASE PAIR DNAM-D5SICSTP COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE I, THERMOSTABLE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KLENOW FRAGMENT, UNP RESIDUES 293-832; COMPND 5 SYNONYM: TAQ POLYMERASE 1; COMPND 6 EC: 2.7.7.7; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3'); COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: (5'-D(*AP*AP*AP*(BMN)P*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)- COMPND 14 3'); COMPND 15 CHAIN: C; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS AQUATICUS; SOURCE 3 ORGANISM_TAXID: 271; SOURCE 4 GENE: POL I, POL1, POLA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PET-21B; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 OTHER_DETAILS: DNA SYNTHESIZER; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 OTHER_DETAILS: DNA SYNTHESIZER KEYWDS DNA POLYMERASE, ARTIFICIAL BASE PAIR, TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.BETZ,K.DIEDERICHS,A.MARX REVDAT 3 12-SEP-12 3SV3 1 JRNL REVDAT 2 04-JUL-12 3SV3 1 JRNL REVDAT 1 06-JUN-12 3SV3 0 JRNL AUTH K.BETZ,D.A.MALYSHEV,T.LAVERGNE,W.WELTE,K.DIEDERICHS, JRNL AUTH 2 T.J.DWYER,P.ORDOUKHANIAN,F.E.ROMESBERG,A.MARX JRNL TITL KLENTAQ POLYMERASE REPLICATES UNNATURAL BASE PAIRS BY JRNL TITL 2 INDUCING A WATSON-CRICK GEOMETRY. JRNL REF NAT.CHEM.BIOL. V. 8 612 2012 JRNL REFN ISSN 1552-4450 JRNL PMID 22660438 JRNL DOI 10.1038/NCHEMBIO.966 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.200 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 69989 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 3511 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.0131 - 6.1363 1.00 2655 155 0.1815 0.2055 REMARK 3 2 6.1363 - 4.8722 1.00 2645 146 0.1717 0.1934 REMARK 3 3 4.8722 - 4.2567 1.00 2686 120 0.1239 0.1919 REMARK 3 4 4.2567 - 3.8678 1.00 2623 169 0.1263 0.1591 REMARK 3 5 3.8678 - 3.5906 1.00 2620 171 0.1355 0.2051 REMARK 3 6 3.5906 - 3.3790 1.00 2664 153 0.1367 0.1857 REMARK 3 7 3.3790 - 3.2098 1.00 2659 138 0.1488 0.1774 REMARK 3 8 3.2098 - 3.0701 1.00 2627 150 0.1513 0.1964 REMARK 3 9 3.0701 - 2.9520 1.00 2695 125 0.1508 0.1923 REMARK 3 10 2.9520 - 2.8501 1.00 2648 153 0.1586 0.2548 REMARK 3 11 2.8501 - 2.7610 1.00 2660 154 0.1717 0.2614 REMARK 3 12 2.7610 - 2.6821 1.00 2644 144 0.1803 0.2103 REMARK 3 13 2.6821 - 2.6115 1.00 2655 139 0.1709 0.2322 REMARK 3 14 2.6115 - 2.5478 1.00 2692 145 0.1899 0.2538 REMARK 3 15 2.5478 - 2.4899 1.00 2591 167 0.2075 0.2867 REMARK 3 16 2.4899 - 2.4369 1.00 2680 127 0.2223 0.3176 REMARK 3 17 2.4369 - 2.3881 1.00 2665 128 0.2241 0.2914 REMARK 3 18 2.3881 - 2.3431 1.00 2709 116 0.2227 0.3044 REMARK 3 19 2.3431 - 2.3012 1.00 2652 130 0.2155 0.2564 REMARK 3 20 2.3012 - 2.2622 1.00 2615 148 0.2276 0.2787 REMARK 3 21 2.2622 - 2.2257 1.00 2708 135 0.2252 0.2852 REMARK 3 22 2.2257 - 2.1915 1.00 2712 104 0.2452 0.2821 REMARK 3 23 2.1915 - 2.1592 1.00 2627 139 0.2461 0.3046 REMARK 3 24 2.1592 - 2.1288 1.00 2687 132 0.2475 0.2914 REMARK 3 25 2.1288 - 2.1001 0.99 2659 123 0.2655 0.3058 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.65 REMARK 3 K_SOL : 0.41 REMARK 3 B_SOL : 47.72 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.550 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.090 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.21900 REMARK 3 B22 (A**2) : 2.21900 REMARK 3 B33 (A**2) : -4.43810 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5123 REMARK 3 ANGLE : 1.144 7034 REMARK 3 CHIRALITY : 0.057 762 REMARK 3 PLANARITY : 0.005 813 REMARK 3 DIHEDRAL : 17.480 1969 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (chain A and resid 293:433) REMARK 3 ORIGIN FOR THE GROUP (A): 39.7265 -43.1657 -17.7760 REMARK 3 T TENSOR REMARK 3 T11: 0.2944 T22: 0.1905 REMARK 3 T33: 0.2329 T12: -0.0353 REMARK 3 T13: 0.0289 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 3.7850 L22: 2.8593 REMARK 3 L33: 1.9876 L12: -0.1503 REMARK 3 L13: -0.7656 L23: -0.1330 REMARK 3 S TENSOR REMARK 3 S11: -0.0978 S12: 0.1085 S13: -0.3765 REMARK 3 S21: -0.2755 S22: 0.0207 S23: -0.2586 REMARK 3 S31: 0.2676 S32: 0.1956 S33: 0.0602 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (chain A and resid 434:603) REMARK 3 ORIGIN FOR THE GROUP (A): 35.8455 -12.5877 -0.7615 REMARK 3 T TENSOR REMARK 3 T11: 0.1873 T22: 0.1367 REMARK 3 T33: 0.2154 T12: 0.0031 REMARK 3 T13: 0.0024 T23: 0.0232 REMARK 3 L TENSOR REMARK 3 L11: 0.8653 L22: 1.6462 REMARK 3 L33: 2.9146 L12: 0.6759 REMARK 3 L13: 0.5351 L23: 1.2257 REMARK 3 S TENSOR REMARK 3 S11: -0.0415 S12: -0.0425 S13: 0.1397 REMARK 3 S21: -0.1226 S22: -0.0079 S23: 0.0527 REMARK 3 S31: -0.4408 S32: -0.0430 S33: 0.0456 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (chain A and resid 604:687) REMARK 3 ORIGIN FOR THE GROUP (A): 11.1774 -14.0605 -7.9487 REMARK 3 T TENSOR REMARK 3 T11: 0.6892 T22: 0.5565 REMARK 3 T33: 0.0254 T12: 0.2553 REMARK 3 T13: -0.0570 T23: -0.1153 REMARK 3 L TENSOR REMARK 3 L11: 1.3111 L22: 0.6569 REMARK 3 L33: 2.4713 L12: 0.1699 REMARK 3 L13: 0.3117 L23: -0.5769 REMARK 3 S TENSOR REMARK 3 S11: -0.1524 S12: -0.8719 S13: 0.5696 REMARK 3 S21: 0.4553 S22: 0.2324 S23: 0.0165 REMARK 3 S31: -1.4093 S32: -0.8883 S33: 0.0377 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (chain A and resid 688:832) REMARK 3 ORIGIN FOR THE GROUP (A): 17.4324 -25.3356 -13.6300 REMARK 3 T TENSOR REMARK 3 T11: 0.2033 T22: 0.2388 REMARK 3 T33: 0.1826 T12: 0.0216 REMARK 3 T13: -0.0320 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 1.5743 L22: 1.7939 REMARK 3 L33: 3.8575 L12: 0.3617 REMARK 3 L13: -0.0001 L23: -0.6858 REMARK 3 S TENSOR REMARK 3 S11: -0.0419 S12: -0.0677 S13: -0.0153 REMARK 3 S21: 0.0054 S22: 0.0521 S23: 0.1566 REMARK 3 S31: -0.3888 S32: -0.5426 S33: -0.0435 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (chain B and resid 101:112) REMARK 3 ORIGIN FOR THE GROUP (A): 36.8617 -22.9107 4.4011 REMARK 3 T TENSOR REMARK 3 T11: 0.2218 T22: 0.3106 REMARK 3 T33: 0.3427 T12: 0.0487 REMARK 3 T13: -0.0220 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 3.0232 L22: 1.2598 REMARK 3 L33: 1.6189 L12: 1.7948 REMARK 3 L13: -0.0479 L23: 0.3166 REMARK 3 S TENSOR REMARK 3 S11: 0.0270 S12: 0.1758 S13: -0.2274 REMARK 3 S21: 0.1068 S22: -0.2148 S23: -0.3170 REMARK 3 S31: -0.0456 S32: 0.6830 S33: 0.1211 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (chain C and resid 204:216) REMARK 3 ORIGIN FOR THE GROUP (A): 35.8528 -23.8130 5.3030 REMARK 3 T TENSOR REMARK 3 T11: 0.2154 T22: 0.2465 REMARK 3 T33: 0.1603 T12: 0.0860 REMARK 3 T13: 0.0135 T23: -0.0184 REMARK 3 L TENSOR REMARK 3 L11: 0.8591 L22: 4.2353 REMARK 3 L33: 3.2258 L12: 1.7937 REMARK 3 L13: -0.5210 L23: 0.1696 REMARK 3 S TENSOR REMARK 3 S11: -0.2855 S12: -0.0847 S13: 0.1080 REMARK 3 S21: 0.2351 S22: 0.0955 S23: -0.1588 REMARK 3 S31: -0.0160 S32: -0.0121 S33: 0.2227 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3SV3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-AUG-11. REMARK 100 THE RCSB ID CODE IS RCSB066688. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9999 REMARK 200 MONOCHROMATOR : LN2 COOLED FIXED-EXIT SI(111) REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 47.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.980 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.330 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 200 STARTING MODEL: PDB ENTRY 3M8S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13% PEG 8000, 100MM NH4CL, 0.1M REMARK 280 MGFORMATE, 0.1M TRIS, PH 8.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.32600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 60.65200 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 60.65200 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 30.32600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DA C 201 REMARK 465 DA C 202 REMARK 465 DA C 203 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS A 804 O1G 5SI A 1 1.49 REMARK 500 HG SER A 612 OE1 GLN A 613 1.50 REMARK 500 O3G 5SI A 1 O HOH A 905 2.00 REMARK 500 OD2 ASP A 732 O HOH A 876 2.15 REMARK 500 OE2 GLU A 615 O HOH A 112 2.17 REMARK 500 OE1 GLU A 466 NH1 ARG A 469 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC B 103 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DA B 105 O4' - C1' - N9 ANGL. DEV. = -4.7 DEGREES REMARK 500 DG B 108 C1' - O4' - C4' ANGL. DEV. = -6.2 DEGREES REMARK 500 DG B 108 O4' - C1' - N9 ANGL. DEV. = 4.0 DEGREES REMARK 500 DC B 109 O4' - C1' - N1 ANGL. DEV. = 4.2 DEGREES REMARK 500 DG C 206 O4' - C4' - C3' ANGL. DEV. = -3.3 DEGREES REMARK 500 DT C 212 O4' - C1' - N1 ANGL. DEV. = -6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 381 106.61 -165.49 REMARK 500 PRO A 382 1.67 -68.22 REMARK 500 THR A 399 -164.36 -110.80 REMARK 500 VAL A 433 -69.85 -127.18 REMARK 500 TYR A 545 -56.79 -124.61 REMARK 500 VAL A 586 -16.45 -158.53 REMARK 500 GLU A 687 -31.46 78.64 REMARK 500 HIS A 784 -62.85 77.34 REMARK 500 TYR A 811 89.44 -167.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 836 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 5SI A 833 O2G REMARK 620 2 TYR A 611 O 101.3 REMARK 620 3 ASP A 610 OD2 107.3 86.0 REMARK 620 4 5SI A 833 O1A 89.5 162.3 104.3 REMARK 620 5 ASP A 785 OD2 169.1 86.4 80.9 81.3 REMARK 620 6 5SI A 833 O1B 82.7 91.3 170.0 76.0 89.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 834 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 5SI A 1 O2G REMARK 620 2 5SI A 1 O1A 67.5 REMARK 620 3 5SI A 1 O1B 62.5 66.1 REMARK 620 4 HOH A 153 O 154.7 89.2 99.8 REMARK 620 5 HOH A 154 O 96.0 148.8 82.8 99.7 REMARK 620 6 HOH A 170 O 93.2 91.9 151.6 97.6 116.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 837 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 785 OD1 REMARK 620 2 5SI A 833 O1A 83.8 REMARK 620 3 ASP A 610 OD1 131.2 107.8 REMARK 620 4 ASP A 610 OD2 89.4 84.8 46.9 REMARK 620 5 HOH A 855 O 83.9 152.1 99.2 120.1 REMARK 620 6 HOH A 163 O 154.8 100.2 71.5 115.6 81.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 842 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 5SI A 1 O1G REMARK 620 2 HOH A 903 O 166.7 REMARK 620 3 HOH A 905 O 85.2 87.9 REMARK 620 4 HOH A 902 O 101.1 90.4 90.4 REMARK 620 5 HOH A 901 O 77.5 91.1 90.0 178.5 REMARK 620 6 HOH A 904 O 96.2 90.6 178.6 89.7 90.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 1 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 2 O REMARK 620 2 HOH B 6 O 90.3 REMARK 620 3 HOH B 5 O 89.5 177.8 REMARK 620 4 HOH C 222 O 179.7 90.0 90.1 REMARK 620 5 HOH B 4 O 90.5 90.8 87.1 89.5 REMARK 620 6 HOH B 3 O 88.8 89.5 92.6 91.1 179.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 5SI A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 5SI A 833 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 834 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 835 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 836 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 837 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 838 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 839 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 840 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 841 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 842 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 843 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 844 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 845 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 846 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 847 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT C 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT C 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT C 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT C 217 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT C 219 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3RTV RELATED DB: PDB REMARK 900 RELATED ID: 3KTQ RELATED DB: PDB REMARK 900 RELATED ID: 3SV4 RELATED DB: PDB REMARK 900 RELATED ID: 3SYZ RELATED DB: PDB REMARK 900 RELATED ID: 3SZ2 RELATED DB: PDB DBREF 3SV3 A 293 832 UNP P19821 DPO1_THEAQ 293 832 DBREF 3SV3 B 101 112 PDB 3SV3 3SV3 101 112 DBREF 3SV3 C 201 216 PDB 3SV3 3SV3 201 216 SEQRES 1 A 540 ALA LEU GLU GLU ALA PRO TRP PRO PRO PRO GLU GLY ALA SEQRES 2 A 540 PHE VAL GLY PHE VAL LEU SER ARG LYS GLU PRO MET TRP SEQRES 3 A 540 ALA ASP LEU LEU ALA LEU ALA ALA ALA ARG GLY GLY ARG SEQRES 4 A 540 VAL HIS ARG ALA PRO GLU PRO TYR LYS ALA LEU ARG ASP SEQRES 5 A 540 LEU LYS GLU ALA ARG GLY LEU LEU ALA LYS ASP LEU SER SEQRES 6 A 540 VAL LEU ALA LEU ARG GLU GLY LEU GLY LEU PRO PRO GLY SEQRES 7 A 540 ASP ASP PRO MET LEU LEU ALA TYR LEU LEU ASP PRO SER SEQRES 8 A 540 ASN THR THR PRO GLU GLY VAL ALA ARG ARG TYR GLY GLY SEQRES 9 A 540 GLU TRP THR GLU GLU ALA GLY GLU ARG ALA ALA LEU SER SEQRES 10 A 540 GLU ARG LEU PHE ALA ASN LEU TRP GLY ARG LEU GLU GLY SEQRES 11 A 540 GLU GLU ARG LEU LEU TRP LEU TYR ARG GLU VAL GLU ARG SEQRES 12 A 540 PRO LEU SER ALA VAL LEU ALA HIS MET GLU ALA THR GLY SEQRES 13 A 540 VAL ARG LEU ASP VAL ALA TYR LEU ARG ALA LEU SER LEU SEQRES 14 A 540 GLU VAL ALA GLU GLU ILE ALA ARG LEU GLU ALA GLU VAL SEQRES 15 A 540 PHE ARG LEU ALA GLY HIS PRO PHE ASN LEU ASN SER ARG SEQRES 16 A 540 ASP GLN LEU GLU ARG VAL LEU PHE ASP GLU LEU GLY LEU SEQRES 17 A 540 PRO ALA ILE GLY LYS THR GLU LYS THR GLY LYS ARG SER SEQRES 18 A 540 THR SER ALA ALA VAL LEU GLU ALA LEU ARG GLU ALA HIS SEQRES 19 A 540 PRO ILE VAL GLU LYS ILE LEU GLN TYR ARG GLU LEU THR SEQRES 20 A 540 LYS LEU LYS SER THR TYR ILE ASP PRO LEU PRO ASP LEU SEQRES 21 A 540 ILE HIS PRO ARG THR GLY ARG LEU HIS THR ARG PHE ASN SEQRES 22 A 540 GLN THR ALA THR ALA THR GLY ARG LEU SER SER SER ASP SEQRES 23 A 540 PRO ASN LEU GLN ASN ILE PRO VAL ARG THR PRO LEU GLY SEQRES 24 A 540 GLN ARG ILE ARG ARG ALA PHE ILE ALA GLU GLU GLY TRP SEQRES 25 A 540 LEU LEU VAL ALA LEU ASP TYR SER GLN ILE GLU LEU ARG SEQRES 26 A 540 VAL LEU ALA HIS LEU SER GLY ASP GLU ASN LEU ILE ARG SEQRES 27 A 540 VAL PHE GLN GLU GLY ARG ASP ILE HIS THR GLU THR ALA SEQRES 28 A 540 SER TRP MET PHE GLY VAL PRO ARG GLU ALA VAL ASP PRO SEQRES 29 A 540 LEU MET ARG ARG ALA ALA LYS THR ILE ASN PHE GLY VAL SEQRES 30 A 540 LEU TYR GLY MET SER ALA HIS ARG LEU SER GLN GLU LEU SEQRES 31 A 540 ALA ILE PRO TYR GLU GLU ALA GLN ALA PHE ILE GLU ARG SEQRES 32 A 540 TYR PHE GLN SER PHE PRO LYS VAL ARG ALA TRP ILE GLU SEQRES 33 A 540 LYS THR LEU GLU GLU GLY ARG ARG ARG GLY TYR VAL GLU SEQRES 34 A 540 THR LEU PHE GLY ARG ARG ARG TYR VAL PRO ASP LEU GLU SEQRES 35 A 540 ALA ARG VAL LYS SER VAL ARG GLU ALA ALA GLU ARG MET SEQRES 36 A 540 ALA PHE ASN MET PRO VAL GLN GLY THR ALA ALA ASP LEU SEQRES 37 A 540 MET LYS LEU ALA MET VAL LYS LEU PHE PRO ARG LEU GLU SEQRES 38 A 540 GLU MET GLY ALA ARG MET LEU LEU GLN VAL HIS ASP GLU SEQRES 39 A 540 LEU VAL LEU GLU ALA PRO LYS GLU ARG ALA GLU ALA VAL SEQRES 40 A 540 ALA ARG LEU ALA LYS GLU VAL MET GLU GLY VAL TYR PRO SEQRES 41 A 540 LEU ALA VAL PRO LEU GLU VAL GLU VAL GLY ILE GLY GLU SEQRES 42 A 540 ASP TRP LEU SER ALA LYS GLU SEQRES 1 B 12 DG DA DC DC DA DC DG DG DC DG DC DOC SEQRES 1 C 16 DA DA DA BMN DG DG DC DG DC DC DG DT DG SEQRES 2 C 16 DG DT DC MODRES 3SV3 DOC B 112 DC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE HET DOC B 112 18 HET BMN C 204 23 HET 5SI A 1 32 HET 5SI A 833 32 HET MG A 834 1 HET GOL A 835 6 HET GOL A 2 6 HET FMT A 8 3 HET FMT A 9 3 HET MG A 836 1 HET MG A 837 1 HET FMT A 838 3 HET FMT A 839 3 HET FMT A 840 3 HET FMT A 841 3 HET MG A 842 1 HET FMT A 843 3 HET FMT A 844 3 HET FMT A 845 3 HET FMT A 846 3 HET FMT A 847 3 HET MG B 1 1 HET GOL C 3 6 HET FMT C 4 3 HET FMT C 6 3 HET FMT C 1 3 HET FMT C 217 3 HET GOL C 218 6 HET FMT C 219 3 HETNAM DOC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE HETNAM BMN (1R)-1,4-ANHYDRO-2-DEOXY-1-(3-METHOXYNAPHTHALEN-2-YL)- HETNAM 2 BMN 5-O-PHOSPHONO-D-ERYTHRO-PENTITOL HETNAM 5SI 2-{2-DEOXY-5-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOOXY) HETNAM 2 5SI PHOSPHORYL]OXY}PHOSPHORYL]-BETA-D-ERYTHRO- HETNAM 3 5SI PENTOFURANOSYL}-6-METHYLISOQUINOLINE-1(2H)-THIONE HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETNAM FMT FORMIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 DOC C9 H14 N3 O6 P FORMUL 3 BMN C16 H19 O7 P FORMUL 4 5SI 2(C15 H20 N O12 P3 S) FORMUL 6 MG 5(MG 2+) FORMUL 7 GOL 4(C3 H8 O3) FORMUL 9 FMT 16(C H2 O2) FORMUL 31 HOH *241(H2 O) HELIX 1 1 GLU A 337 ARG A 343 1 7 HELIX 2 2 LEU A 352 GLU A 363 1 12 HELIX 3 3 ASP A 372 ASP A 381 1 10 HELIX 4 4 THR A 386 GLY A 395 1 10 HELIX 5 5 GLU A 401 GLY A 422 1 22 HELIX 6 6 GLU A 423 VAL A 433 1 11 HELIX 7 7 VAL A 433 GLY A 448 1 16 HELIX 8 8 ASP A 452 GLY A 479 1 28 HELIX 9 9 SER A 486 ASP A 496 1 11 HELIX 10 10 SER A 515 LEU A 522 1 8 HELIX 11 11 PRO A 527 TYR A 545 1 19 HELIX 12 12 PRO A 548 ILE A 553 5 6 HELIX 13 13 THR A 588 ARG A 596 1 9 HELIX 14 14 GLN A 613 GLY A 624 1 12 HELIX 15 15 ASP A 625 GLU A 634 1 10 HELIX 16 16 ASP A 637 GLY A 648 1 12 HELIX 17 17 PRO A 650 VAL A 654 5 5 HELIX 18 18 ASP A 655 TYR A 671 1 17 HELIX 19 19 SER A 674 ALA A 683 1 10 HELIX 20 20 GLU A 687 SER A 699 1 13 HELIX 21 21 PHE A 700 GLY A 718 1 19 HELIX 22 22 PRO A 731 ALA A 735 5 5 HELIX 23 23 VAL A 737 GLY A 776 1 40 HELIX 24 24 ARG A 795 GLY A 809 1 15 SHEET 1 A 4 GLU A 295 ALA A 297 0 SHEET 2 A 4 ARG A 331 ARG A 334 1 O VAL A 332 N ALA A 297 SHEET 3 A 4 LEU A 321 ALA A 327 -1 N ALA A 326 O HIS A 333 SHEET 4 A 4 PHE A 306 LEU A 311 -1 N PHE A 306 O ALA A 327 SHEET 1 B 2 ARG A 450 LEU A 451 0 SHEET 2 B 2 PHE A 598 ILE A 599 -1 O ILE A 599 N ARG A 450 SHEET 1 C 2 ARG A 563 ASN A 565 0 SHEET 2 C 2 SER A 575 SER A 577 -1 O SER A 575 N ASN A 565 SHEET 1 D 4 ARG A 778 GLN A 782 0 SHEET 2 D 4 GLU A 786 PRO A 792 -1 O GLU A 790 N ARG A 778 SHEET 3 D 4 TRP A 604 TYR A 611 -1 N LEU A 609 O LEU A 787 SHEET 4 D 4 VAL A 819 GLY A 824 -1 O GLY A 824 N LEU A 606 SHEET 1 E 2 TYR A 719 GLU A 721 0 SHEET 2 E 2 ARG A 727 TYR A 729 -1 O ARG A 728 N VAL A 720 LINK O3' DC B 111 P DOC B 112 1555 1555 1.60 LINK O2G 5SI A 833 MG MG A 836 1555 1555 2.12 LINK O2G 5SI A 1 MG MG A 834 1555 1555 2.14 LINK O TYR A 611 MG MG A 836 1555 1555 2.23 LINK OD2 ASP A 610 MG MG A 836 1555 1555 2.24 LINK O1A 5SI A 833 MG MG A 836 1555 1555 2.28 LINK O1A 5SI A 1 MG MG A 834 1555 1555 2.28 LINK OD2 ASP A 785 MG MG A 836 1555 1555 2.29 LINK O1B 5SI A 833 MG MG A 836 1555 1555 2.36 LINK O1B 5SI A 1 MG MG A 834 1555 1555 2.37 LINK OD1 ASP A 785 MG MG A 837 1555 1555 2.47 LINK O1A 5SI A 833 MG MG A 837 1555 1555 2.48 LINK O1G 5SI A 1 MG MG A 842 1555 1555 2.68 LINK OD1 ASP A 610 MG MG A 837 1555 1555 2.69 LINK OD2 ASP A 610 MG MG A 837 1555 1555 2.80 LINK MG MG A 834 O HOH A 153 1555 1555 2.05 LINK MG MG A 834 O HOH A 154 1555 1555 2.07 LINK MG MG A 834 O HOH A 170 1555 1555 2.07 LINK MG MG A 837 O HOH A 855 1555 1555 2.11 LINK MG MG A 837 O HOH A 163 1555 1555 2.13 LINK MG MG B 1 O HOH B 2 1555 1555 2.17 LINK MG MG A 842 O HOH A 903 1555 1555 2.18 LINK MG MG A 842 O HOH A 905 1555 1555 2.18 LINK MG MG A 842 O HOH A 902 1555 1555 2.18 LINK MG MG B 1 O HOH B 6 1555 1555 2.18 LINK MG MG B 1 O HOH B 5 1555 1555 2.18 LINK MG MG A 842 O HOH A 901 1555 1555 2.18 LINK MG MG B 1 O HOH C 222 1555 1555 2.18 LINK MG MG A 842 O HOH A 904 1555 1555 2.18 LINK MG MG B 1 O HOH B 4 1555 1555 2.19 LINK MG MG B 1 O HOH B 3 1555 1555 2.19 CISPEP 1 TRP A 299 PRO A 300 0 7.81 CISPEP 2 ASP A 578 PRO A 579 0 1.48 CISPEP 3 LEU A 682 ALA A 683 0 -1.41 CISPEP 4 LYS A 831 GLU A 832 0 -1.03 SITE 1 AC1 15 HOH A 153 HOH A 154 HOH A 170 GLN A 633 SITE 2 AC1 15 ARG A 801 LYS A 804 GLU A 805 LEU A 813 SITE 3 AC1 15 ALA A 814 PRO A 816 MG A 834 MG A 842 SITE 4 AC1 15 HOH A 901 HOH A 905 HOH A 906 SITE 1 AC2 20 HOH A 169 HOH A 191 ARG A 573 ASP A 610 SITE 2 AC2 20 TYR A 611 GLN A 613 ILE A 614 GLU A 615 SITE 3 AC2 20 HIS A 639 ARG A 659 LYS A 663 THR A 664 SITE 4 AC2 20 PHE A 667 ASP A 785 MG A 836 MG A 837 SITE 5 AC2 20 HOH A 893 HOH B 49 DOC B 112 DG C 205 SITE 1 AC3 4 5SI A 1 HOH A 153 HOH A 154 HOH A 170 SITE 1 AC4 10 THR A 544 TYR A 545 PRO A 579 ASN A 580 SITE 2 AC4 10 ASN A 583 HOH A 871 HOH A 882 HOH C 95 SITE 3 AC4 10 DC C 209 DC C 210 SITE 1 AC5 5 HOH A 155 ARG A 313 TRP A 318 ASP A 551 SITE 2 AC5 5 LEU A 552 SITE 1 AC6 2 GLU A 337 LYS A 340 SITE 1 AC7 2 HIS A 443 THR A 447 SITE 1 AC8 5 ASP A 610 TYR A 611 ASP A 785 5SI A 833 SITE 2 AC8 5 MG A 837 SITE 1 AC9 7 HOH A 163 ASP A 610 ASP A 785 5SI A 833 SITE 2 AC9 7 MG A 836 HOH A 855 DOC B 112 SITE 1 BC1 4 ILE A 823 GLY A 824 GLU A 825 SER A 829 SITE 1 BC2 4 PRO A 792 LYS A 793 GLU A 794 ARG A 795 SITE 1 BC3 1 HOH A 42 SITE 1 BC4 3 LEU A 311 GLU A 400 ARG A 405 SITE 1 BC5 6 5SI A 1 HOH A 901 HOH A 902 HOH A 903 SITE 2 BC5 6 HOH A 904 HOH A 905 SITE 1 BC6 6 ASP A 488 LYS A 511 HOH A 852 DC B 106 SITE 2 BC6 6 DT C 212 FMT C 217 SITE 1 BC7 3 GLU A 708 ARG A 715 HOH A 908 SITE 1 BC8 5 HOH A 89 HOH A 90 HOH A 106 ASN A 485 SITE 2 BC8 5 DG B 107 SITE 1 BC9 1 ARG A 746 SITE 1 CC1 2 TYR A 455 ARG A 596 SITE 1 CC2 6 HOH B 2 HOH B 3 HOH B 4 HOH B 5 SITE 2 CC2 6 HOH B 6 HOH C 222 SITE 1 CC3 3 HOH C 41 DG C 205 DG C 206 SITE 1 CC4 3 ARG A 728 DG C 206 DC C 207 SITE 1 CC5 3 HOH C 135 DC C 207 DG C 208 SITE 1 CC6 3 HOH C 35 DG C 213 DG C 214 SITE 1 CC7 8 HOH A 90 HOH A 121 ARG A 487 FMT A 843 SITE 2 CC7 8 HOH A 852 HOH C 8 DG C 211 DT C 212 SITE 1 CC8 5 DC B 104 HOH C 36 DC C 210 DG C 211 SITE 2 CC8 5 DT C 212 SITE 1 CC9 4 ARG A 556 DC B 103 DT C 215 DC C 216 CRYST1 108.545 108.545 90.978 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009213 0.005319 0.000000 0.00000 SCALE2 0.000000 0.010638 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010992 0.00000 MASTER 568 0 29 24 14 0 45 6 0 0 0 45 END