HEADER TRANSFERASE 29-JUN-11 3SNO TITLE CRYSTAL STRUCTURE OF A PUTATIVE AMINOTRANSFERASE (NCGL2491) FROM TITLE 2 CORYNEBACTERIUM GLUTAMICUM ATCC 13032 AT 1.60 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL AMINOTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE/4-AMINO-4- COMPND 5 DEOXYCHORISMATE LYASE; COMPND 6 EC: 2.6.1.42; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM GLUTAMICUM; SOURCE 3 ORGANISM_TAXID: 196627; SOURCE 4 STRAIN: ATCC 13032 KITASATO; SOURCE 5 GENE: CGL2580; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS D-AMINOACID AMINOTRANSFERASE-LIKE PLP-DEPENDENT ENZYMES, STRUCTURAL KEYWDS 2 GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, PSI-BIOLOGY, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 24-JAN-18 3SNO 1 JRNL REVDAT 3 25-OCT-17 3SNO 1 REMARK REVDAT 2 24-DEC-14 3SNO 1 TITLE REVDAT 1 20-JUL-11 3SNO 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL AMINOTRANSFERASE JRNL TITL 2 (NCGL2491) FROM CORYNEBACTERIUM GLUTAMICUM ATCC 13032 JRNL TITL 3 KITASATO AT 1.60 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 34490 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1737 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 17 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.65 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2646 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2340 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2535 REMARK 3 BIN R VALUE (WORKING SET) : 0.2342 REMARK 3 BIN FREE R VALUE : 0.2314 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 111 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1834 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 187 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.71 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.67660 REMARK 3 B22 (A**2) : -7.17970 REMARK 3 B33 (A**2) : 0.50310 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.36610 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1996 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2729 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 956 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 41 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 315 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1996 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 274 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2391 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.03 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.33 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.52 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|10 - A|314 } REMARK 3 ORIGIN FOR THE GROUP (A): 51.3026 35.0874 -3.3230 REMARK 3 T TENSOR REMARK 3 T11: -0.1001 T22: -0.0982 REMARK 3 T33: -0.0445 T12: 0.0040 REMARK 3 T13: 0.0097 T23: 0.0178 REMARK 3 L TENSOR REMARK 3 L11: 1.7657 L22: 1.6581 REMARK 3 L33: 0.5035 L12: 1.0792 REMARK 3 L13: -0.1063 L23: -0.0924 REMARK 3 S TENSOR REMARK 3 S11: -0.1551 S12: 0.0186 S13: -0.1213 REMARK 3 S21: -0.2014 S22: 0.0473 S23: -0.0408 REMARK 3 S31: 0.0754 S32: -0.0052 S33: 0.1078 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3. 1,2 ETHANEDIOL (EDO) FROM THE CRYOPROTECTANT HAS REMARK 3 BEEN MODELED IN THE SOLVENT STRUCTURE. 4. RAMACHANDRAN OUTLIER REMARK 3 AT RESIDUE 294 IS IN A REGION OF SUB-OPTIMAL ELECTRON DENSITY. REMARK 3 5. THE STRUCTURE HAS SEVERAL UNMODELED REGIONS WHICH HAVE REMARK 3 ELECTRON DENSITY THAT COULD NOT BE RELIABLY INTERPRETED. IN REMARK 3 ADDITION, THERE ARE THREE REGIONS OF SUB-OPTIMAL MODEL FIT IN REMARK 3 WHICH THE MOST STRUCTURALLY SIMILAR PROTEIN (AS DETERMINED BY REMARK 3 THE PROGRAM SSM), PDB ID 5DAA, WAS USED TO GUIDE THE MODELING. REMARK 3 THESE INCLUDE RESIDUES 143-150, 204-221 AND 291-295. 6. THE REMARK 3 REFINEMENT WAS RESTRAINED WITH THE MAD PHASES. REMARK 4 REMARK 4 3SNO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000066426. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.64 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97949,0.97932 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE JANUARY 30, 2009 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34491 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 28.757 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.02700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.45600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: DATA WERE SCALED USING XSCALE WITH FRIEDEL PAIRS KEPT AS REMARK 200 SEPARATE WHEN COMPUTING R MERGE, COMPLETENESS AND REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10.0% 2-METHYL-2,4-PENTANEDIOL, 0.1M REMARK 280 CITRIC ACID PH 3.64, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 69.94950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.29300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 69.94950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 26.29300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS AND SIZE-EXCLUSION CHROMATOGRAPHY REMARK 300 IN COMBINATION WITH STATIC LIGHT SCATTERING SUPPORT THE ASSIGNMENT REMARK 300 OF A DIMER AS THE SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 139.89900 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 ALA A 2 REMARK 465 LEU A 3 REMARK 465 GLU A 4 REMARK 465 PRO A 5 REMARK 465 GLN A 6 REMARK 465 ILE A 7 REMARK 465 LYS A 8 REMARK 465 SER A 9 REMARK 465 ASN A 102 REMARK 465 GLY A 151 REMARK 465 TYR A 152 REMARK 465 SER A 153 REMARK 465 ILE A 154 REMARK 465 ASP A 155 REMARK 465 THR A 156 REMARK 465 GLY A 157 REMARK 465 LEU A 158 REMARK 465 PRO A 159 REMARK 465 GLY A 160 REMARK 465 ILE A 161 REMARK 465 GLY A 162 REMARK 465 LYS A 163 REMARK 465 ALA A 164 REMARK 465 THR A 165 REMARK 465 ARG A 166 REMARK 465 GLY A 167 REMARK 465 GLU A 168 REMARK 465 LEU A 169 REMARK 465 SER A 170 REMARK 465 LYS A 171 REMARK 465 VAL A 172 REMARK 465 GLU A 173 REMARK 465 ARG A 174 REMARK 465 THR A 175 REMARK 465 PRO A 176 REMARK 465 ALA A 177 REMARK 465 PRO A 178 REMARK 465 TRP A 179 REMARK 465 LEU A 180 REMARK 465 THR A 181 REMARK 465 VAL A 182 REMARK 465 GLY A 183 REMARK 465 ALA A 184 REMARK 465 LYS A 185 REMARK 465 THR A 186 REMARK 465 LEU A 187 REMARK 465 ALA A 188 REMARK 465 TYR A 189 REMARK 465 ALA A 190 REMARK 465 ALA A 191 REMARK 465 ASN A 192 REMARK 465 MSE A 193 REMARK 465 ALA A 194 REMARK 465 ALA A 195 REMARK 465 LEU A 196 REMARK 465 ARG A 197 REMARK 465 TYR A 198 REMARK 465 ALA A 199 REMARK 465 LYS A 200 REMARK 465 SER A 201 REMARK 465 ASN A 202 REMARK 465 GLY A 203 REMARK 465 GLY A 237 REMARK 465 GLY A 238 REMARK 465 ASP A 239 REMARK 465 ILE A 240 REMARK 465 LEU A 241 REMARK 465 PRO A 242 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 101 C O REMARK 470 SER A 144 OG REMARK 470 VAL A 145 CG1 CG2 REMARK 470 ARG A 150 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 204 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 205 CG OD1 OD2 REMARK 470 PHE A 209 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 213 CG OD1 OD2 REMARK 470 GLU A 217 CG CD OE1 OE2 REMARK 470 HIS A 294 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 295 CG CD CE NZ REMARK 470 ARG A 297 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 303 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MSE A 34 -36.97 -130.55 REMARK 500 ASP A 56 59.42 39.68 REMARK 500 ASP A 205 82.49 -157.13 REMARK 500 LEU A 216 -82.81 -103.44 REMARK 500 THR A 220 31.82 -143.09 REMARK 500 ASP A 292 -17.56 66.93 REMARK 500 HIS A 294 137.01 61.67 REMARK 500 LEU A 296 39.90 -85.39 REMARK 500 ARG A 297 -159.56 56.03 REMARK 500 LYS A 298 116.63 -160.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 394391 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3SNO A 1 314 UNP Q8NMJ3 Q8NMJ3_CORGL 1 314 SEQADV 3SNO GLY A 0 UNP Q8NMJ3 LEADER SEQUENCE SEQRES 1 A 315 GLY MSE ALA LEU GLU PRO GLN ILE LYS SER ALA PRO THR SEQRES 2 A 315 PRO VAL ILE LEU ILE VAL GLU PRO TYR GLY GLY SER ILE SEQRES 3 A 315 ARG GLN GLN ASN PRO ASN LEU PRO MSE VAL PHE TRP ASP SEQRES 4 A 315 ASP ALA ALA LEU THR ARG GLY ASP GLY ILE PHE GLU THR SEQRES 5 A 315 LEU LEU ILE ARG ASP GLY HIS ALA CYS ASN VAL ARG ARG SEQRES 6 A 315 HIS GLY GLU ARG PHE LYS ALA SER ALA ALA LEU LEU GLY SEQRES 7 A 315 LEU PRO GLU PRO ILE LEU GLU ASP TRP GLU LYS ALA THR SEQRES 8 A 315 GLN MSE GLY ILE GLU SER TRP TYR SER HIS PRO ASN ALA SEQRES 9 A 315 GLY GLU ALA SER CYS THR TRP THR LEU SER ARG GLY ARG SEQRES 10 A 315 SER SER THR GLY LEU ALA SER GLY TRP LEU THR ILE THR SEQRES 11 A 315 PRO VAL SER SER ASP LYS LEU ALA GLN ARG GLU HIS GLY SEQRES 12 A 315 VAL SER VAL MSE THR SER SER ARG GLY TYR SER ILE ASP SEQRES 13 A 315 THR GLY LEU PRO GLY ILE GLY LYS ALA THR ARG GLY GLU SEQRES 14 A 315 LEU SER LYS VAL GLU ARG THR PRO ALA PRO TRP LEU THR SEQRES 15 A 315 VAL GLY ALA LYS THR LEU ALA TYR ALA ALA ASN MSE ALA SEQRES 16 A 315 ALA LEU ARG TYR ALA LYS SER ASN GLY PHE ASP ASP VAL SEQRES 17 A 315 ILE PHE THR ASP GLY ASP ARG VAL LEU GLU GLY ALA THR SEQRES 18 A 315 SER THR VAL VAL SER PHE LYS GLY ASP LYS ILE ARG THR SEQRES 19 A 315 PRO SER PRO GLY GLY ASP ILE LEU PRO GLY THR THR GLN SEQRES 20 A 315 ALA ALA LEU PHE ALA HIS ALA THR GLU LYS GLY TRP ARG SEQRES 21 A 315 CYS LYS GLU LYS ASP LEU SER ILE ASP ASP LEU PHE GLY SEQRES 22 A 315 ALA ASP SER VAL TRP LEU VAL SER SER VAL ARG GLY PRO SEQRES 23 A 315 VAL ARG VAL THR ARG LEU ASP GLY HIS LYS LEU ARG LYS SEQRES 24 A 315 PRO ASP ASN GLU LYS GLU ILE LYS ALA LEU ILE THR LYS SEQRES 25 A 315 ALA LEU GLY MODRES 3SNO MSE A 34 MET SELENOMETHIONINE MODRES 3SNO MSE A 92 MET SELENOMETHIONINE MODRES 3SNO MSE A 146 MET SELENOMETHIONINE HET MSE A 34 8 HET MSE A 92 8 HET MSE A 146 13 HET EDO A 500 4 HET EDO A 501 4 HET EDO A 502 4 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 EDO 3(C2 H6 O2) FORMUL 5 HOH *187(H2 O) HELIX 1 1 ASN A 61 GLY A 77 1 17 HELIX 2 2 ILE A 82 SER A 99 1 18 HELIX 3 3 SER A 132 GLY A 142 1 11 HELIX 4 4 GLY A 243 LYS A 256 1 14 HELIX 5 5 SER A 266 ALA A 273 1 8 HELIX 6 6 ASN A 301 LEU A 313 1 13 SHEET 1 A 6 ILE A 25 GLN A 28 0 SHEET 2 A 6 VAL A 14 VAL A 18 -1 N ILE A 17 O ARG A 26 SHEET 3 A 6 SER A 123 PRO A 130 -1 O ILE A 128 N VAL A 14 SHEET 4 A 6 ALA A 106 SER A 113 -1 N SER A 107 O THR A 129 SHEET 5 A 6 GLY A 47 ARG A 55 -1 N LEU A 52 O CYS A 108 SHEET 6 A 6 HIS A 58 ALA A 59 -1 O HIS A 58 N ARG A 55 SHEET 1 B 8 ARG A 214 GLY A 218 0 SHEET 2 B 8 ASP A 205 ASP A 211 -1 N PHE A 209 O LEU A 216 SHEET 3 B 8 VAL A 143 SER A 149 1 N MSE A 146 O ILE A 208 SHEET 4 B 8 GLY A 284 LEU A 291 1 O ARG A 290 N VAL A 145 SHEET 5 B 8 SER A 275 SER A 280 -1 N VAL A 276 O VAL A 288 SHEET 6 B 8 THR A 222 LYS A 227 -1 N VAL A 224 O TRP A 277 SHEET 7 B 8 LYS A 230 PRO A 234 -1 O ARG A 232 N SER A 225 SHEET 8 B 8 ARG A 259 LYS A 263 1 O LYS A 263 N THR A 233 LINK C PRO A 33 N MSE A 34 1555 1555 1.32 LINK C MSE A 34 N VAL A 35 1555 1555 1.34 LINK C GLN A 91 N MSE A 92 1555 1555 1.34 LINK C MSE A 92 N GLY A 93 1555 1555 1.34 LINK C VAL A 145 N MSE A 146 1555 1555 1.35 LINK C MSE A 146 N THR A 147 1555 1555 1.33 CISPEP 1 PHE A 204 ASP A 205 0 -0.72 SITE 1 AC1 6 ASP A 229 LYS A 256 GLY A 257 TRP A 258 SITE 2 AC1 6 EDO A 501 HOH A 669 SITE 1 AC2 4 GLU A 87 LYS A 88 GLN A 91 EDO A 500 SITE 1 AC3 2 MSE A 34 HOH A 516 CRYST1 139.899 52.586 37.350 90.00 98.92 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007148 0.000000 0.001122 0.00000 SCALE2 0.000000 0.019016 0.000000 0.00000 SCALE3 0.000000 0.000000 0.027102 0.00000 MASTER 399 0 6 6 14 0 4 6 0 0 0 25 END