HEADER PROTEIN BINDING 03-JUN-11 3SB4 TITLE CRYSTAL STRUCTURE OF A LEUCINE-RICH REPEAT PROTEIN (BT_1240) FROM TITLE 2 BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 1.99 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL LEUCINE RICH REPEAT PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 22-349; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON; SOURCE 3 ORGANISM_TAXID: 818; SOURCE 4 GENE: BT_1240; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS LRR, RIGHT-HANDED BETA-ALPHA SUPERHELIX, LEUCINE-RICH REPEAT, KEYWDS 2 STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 3 PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 25-OCT-17 3SB4 1 REMARK REVDAT 4 24-DEC-14 3SB4 1 TITLE REVDAT 3 23-NOV-11 3SB4 1 TITLE REVDAT 2 13-JUL-11 3SB4 1 TITLE REVDAT 1 22-JUN-11 3SB4 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL LEUCINE RICH REPEAT JRNL TITL 2 PROTEIN (BT_1240) FROM BACTEROIDES THETAIOTAOMICRON VPI-5482 JRNL TITL 3 AT 1.99 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.82 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 52044 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2653 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.04 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3635 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1795 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3476 REMARK 3 BIN R VALUE (WORKING SET) : 0.1777 REMARK 3 BIN FREE R VALUE : 0.2198 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.37 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 159 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5110 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 91 REMARK 3 SOLVENT ATOMS : 417 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.98 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.28620 REMARK 3 B22 (A**2) : 1.61670 REMARK 3 B33 (A**2) : -5.90290 REMARK 3 B12 (A**2) : 5.67070 REMARK 3 B13 (A**2) : -2.63920 REMARK 3 B23 (A**2) : -8.62830 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5420 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7314 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2568 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 125 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 779 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5420 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 725 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6931 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.09 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.05 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.73 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|0 - A|196} REMARK 3 ORIGIN FOR THE GROUP (A): 25.4759 -7.9592 21.4514 REMARK 3 T TENSOR REMARK 3 T11: -0.0206 T22: -0.0230 REMARK 3 T33: -0.1435 T12: -0.0393 REMARK 3 T13: -0.0106 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 1.7527 L22: 2.3397 REMARK 3 L33: 1.8827 L12: 0.5720 REMARK 3 L13: -0.7684 L23: -0.5999 REMARK 3 S TENSOR REMARK 3 S11: -0.0824 S12: 0.0554 S13: -0.0770 REMARK 3 S21: -0.1944 S22: -0.0009 S23: -0.0875 REMARK 3 S31: 0.1875 S32: 0.0199 S33: 0.0833 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|197 - A|349} REMARK 3 ORIGIN FOR THE GROUP (A): 8.9466 0.3513 46.7279 REMARK 3 T TENSOR REMARK 3 T11: -0.1095 T22: -0.0917 REMARK 3 T33: 0.0339 T12: -0.0100 REMARK 3 T13: 0.0105 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 1.4405 L22: 1.2987 REMARK 3 L33: 2.5985 L12: 0.2741 REMARK 3 L13: -0.0688 L23: -0.0290 REMARK 3 S TENSOR REMARK 3 S11: -0.0762 S12: 0.1764 S13: 0.0612 REMARK 3 S21: -0.1046 S22: 0.0135 S23: 0.0733 REMARK 3 S31: -0.1166 S32: -0.1592 S33: 0.0627 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {B|22 - B|196} REMARK 3 ORIGIN FOR THE GROUP (A): 29.7218 -34.0463 43.2766 REMARK 3 T TENSOR REMARK 3 T11: -0.0176 T22: -0.0955 REMARK 3 T33: -0.0604 T12: -0.0007 REMARK 3 T13: 0.0367 T23: -0.0287 REMARK 3 L TENSOR REMARK 3 L11: 2.0975 L22: 2.2723 REMARK 3 L33: 1.3550 L12: 1.1105 REMARK 3 L13: -0.0197 L23: -0.4498 REMARK 3 S TENSOR REMARK 3 S11: -0.1516 S12: 0.1810 S13: -0.0173 REMARK 3 S21: -0.2228 S22: 0.0990 S23: 0.0217 REMARK 3 S31: 0.1139 S32: -0.0120 S33: 0.0526 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {B|197 - B|349} REMARK 3 ORIGIN FOR THE GROUP (A): 42.2721 -14.3019 62.9648 REMARK 3 T TENSOR REMARK 3 T11: -0.0763 T22: -0.0339 REMARK 3 T33: -0.0332 T12: -0.0180 REMARK 3 T13: 0.0051 T23: 0.0275 REMARK 3 L TENSOR REMARK 3 L11: 1.4282 L22: 2.0738 REMARK 3 L33: 1.3035 L12: -0.3347 REMARK 3 L13: -0.0902 L23: 0.1984 REMARK 3 S TENSOR REMARK 3 S11: -0.0178 S12: -0.1172 S13: -0.0845 REMARK 3 S21: 0.2006 S22: 0.0168 S23: -0.1429 REMARK 3 S31: 0.0836 S32: 0.0379 S33: 0.0010 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. ATOM RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL U FACTORS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL REMARK 3 S-MET INCORPORATION. 3. GLYCEROL (GOL) AND PEG (PG4) FROM THE REMARK 3 CRYSTALLIZATION CONDITIONS HAVE BEEN MODELED IN THE STRUCTURE. REMARK 3 4. THE REFINEMENT WAS RESTRAINED AGAINST MAD PHASES. 5. NCS REMARK 3 RESTRAINTS WERE APPLIED USING BUSTER'S LSSR RESTRAINT REMARK 3 REPRESENTATION (-AUTONCS). REMARK 4 REMARK 4 3SB4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000065987. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91162,0.97999,0.97959 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HO RIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE DECEMBER 6, 2010 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52132 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 27.817 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.1300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 72.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.27800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: DATA WERE SCALED USING XSCALE WITH FRIEDEL PAIRS KEPT AS REMARK 200 SEPARATE WHEN COMPUTING R MERGE, COMPLETENESS AND REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20.00% GLYCEROL, 0.0400M KH2PO4, REMARK 280 16.00% PEG-8000, NO BUFFER, PH NONE, NANODROP, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY PROVIDES REMARK 300 SUPPORTING EVIDENCE THAT THE MONOMER IS A SIGNIFICANT REMARK 300 OLIGOMERIZATION STATE IN SOLUTION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 31 CD CE NZ REMARK 470 LYS A 87 NZ REMARK 470 LYS A 95 CG CD CE NZ REMARK 470 ASN A 114 CB CG OD1 ND2 REMARK 470 LYS A 131 CD CE NZ REMARK 470 GLN A 268 CD OE1 NE2 REMARK 470 LYS A 270 CE NZ REMARK 470 LYS A 348 CD CE NZ REMARK 470 LYS B 131 CE NZ REMARK 470 LYS B 154 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 22 -75.43 -38.49 REMARK 500 GLU A 67 -149.75 -112.58 REMARK 500 ASP A 137 127.79 -39.50 REMARK 500 ARG A 186 -6.98 81.48 REMARK 500 LYS A 255 42.17 -87.27 REMARK 500 LYS A 255 43.34 -88.16 REMARK 500 GLN A 268 55.99 -100.21 REMARK 500 PHE A 310 125.24 -31.45 REMARK 500 GLU A 335 47.23 37.13 REMARK 500 GLU B 67 -147.12 -111.98 REMARK 500 ASP B 137 128.09 -39.89 REMARK 500 VAL B 168 -50.31 -121.98 REMARK 500 ARG B 186 -5.15 78.93 REMARK 500 LYS B 255 43.46 -90.35 REMARK 500 PHE B 310 125.90 -30.38 REMARK 500 GLU B 335 47.75 38.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 351 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 353 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 354 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 355 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 357 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 358 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 359 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 361 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 362 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 350 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 352 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 356 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 360 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 B 363 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 417241 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH AN N-TERMINAL PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 GLY 0 FOLLOWED BY RESIDUES 22-349 OF THE TARGET SEQUENCE. DBREF 3SB4 A 22 349 UNP Q8A8C7 Q8A8C7_BACTN 22 349 DBREF 3SB4 B 22 349 UNP Q8A8C7 Q8A8C7_BACTN 22 349 SEQADV 3SB4 GLY A 0 UNP Q8A8C7 LEADER SEQUENCE SEQADV 3SB4 GLY B 0 UNP Q8A8C7 LEADER SEQUENCE SEQRES 1 A 329 GLY GLN VAL SER LYS THR TYR TYR VAL SER LYS PRO GLY SEQRES 2 A 329 THR LEU ILE SER MSE MSE THR GLU GLU GLU ALA ASN SER SEQRES 3 A 329 ILE THR HIS LEU THR LEU THR GLY LYS LEU ASN ALA GLU SEQRES 4 A 329 ASP PHE ARG HIS LEU ARG ASP GLU PHE PRO SER LEU LYS SEQRES 5 A 329 VAL LEU ASP ILE SER ASN ALA GLU ILE LYS MSE TYR SER SEQRES 6 A 329 GLY LYS ALA GLY THR TYR PRO ASN GLY LYS PHE TYR ILE SEQRES 7 A 329 TYR MSE ALA ASN PHE VAL PRO ALA TYR ALA PHE SER ASN SEQRES 8 A 329 VAL VAL ASN GLY VAL THR LYS GLY LYS GLN THR LEU GLU SEQRES 9 A 329 LYS VAL ILE LEU SER GLU LYS ILE LYS ASN ILE GLU ASP SEQRES 10 A 329 ALA ALA PHE LYS GLY CYS ASP ASN LEU LYS ILE CYS GLN SEQRES 11 A 329 ILE ARG LYS LYS THR ALA PRO ASN LEU LEU PRO GLU ALA SEQRES 12 A 329 LEU ALA ASP SER VAL THR ALA ILE PHE ILE PRO LEU GLY SEQRES 13 A 329 SER SER ASP ALA TYR ARG PHE LYS ASN ARG TRP GLU HIS SEQRES 14 A 329 PHE ALA PHE ILE GLU GLY GLU PRO LEU GLU THR THR ILE SEQRES 15 A 329 GLN VAL GLY ALA MSE GLY LYS LEU GLU ASP GLU ILE MSE SEQRES 16 A 329 LYS ALA GLY LEU GLN PRO ARG ASP ILE ASN PHE LEU THR SEQRES 17 A 329 ILE GLU GLY LYS LEU ASP ASN ALA ASP PHE LYS LEU ILE SEQRES 18 A 329 ARG ASP TYR MSE PRO ASN LEU VAL SER LEU ASP ILE SER SEQRES 19 A 329 LYS THR ASN ALA THR THR ILE PRO ASP PHE THR PHE ALA SEQRES 20 A 329 GLN LYS LYS TYR LEU LEU LYS ILE LYS LEU PRO HIS ASN SEQRES 21 A 329 LEU LYS THR ILE GLY GLN ARG VAL PHE SER ASN CYS GLY SEQRES 22 A 329 ARG LEU ALA GLY THR LEU GLU LEU PRO ALA SER VAL THR SEQRES 23 A 329 ALA ILE GLU PHE GLY ALA PHE MSE GLY CYS ASP ASN LEU SEQRES 24 A 329 ARG TYR VAL LEU ALA THR GLY ASP LYS ILE THR THR LEU SEQRES 25 A 329 GLY ASP GLU LEU PHE GLY ASN GLY VAL PRO SER LYS LEU SEQRES 26 A 329 ILE TYR LYS LYS SEQRES 1 B 329 GLY GLN VAL SER LYS THR TYR TYR VAL SER LYS PRO GLY SEQRES 2 B 329 THR LEU ILE SER MSE MSE THR GLU GLU GLU ALA ASN SER SEQRES 3 B 329 ILE THR HIS LEU THR LEU THR GLY LYS LEU ASN ALA GLU SEQRES 4 B 329 ASP PHE ARG HIS LEU ARG ASP GLU PHE PRO SER LEU LYS SEQRES 5 B 329 VAL LEU ASP ILE SER ASN ALA GLU ILE LYS MSE TYR SER SEQRES 6 B 329 GLY LYS ALA GLY THR TYR PRO ASN GLY LYS PHE TYR ILE SEQRES 7 B 329 TYR MSE ALA ASN PHE VAL PRO ALA TYR ALA PHE SER ASN SEQRES 8 B 329 VAL VAL ASN GLY VAL THR LYS GLY LYS GLN THR LEU GLU SEQRES 9 B 329 LYS VAL ILE LEU SER GLU LYS ILE LYS ASN ILE GLU ASP SEQRES 10 B 329 ALA ALA PHE LYS GLY CYS ASP ASN LEU LYS ILE CYS GLN SEQRES 11 B 329 ILE ARG LYS LYS THR ALA PRO ASN LEU LEU PRO GLU ALA SEQRES 12 B 329 LEU ALA ASP SER VAL THR ALA ILE PHE ILE PRO LEU GLY SEQRES 13 B 329 SER SER ASP ALA TYR ARG PHE LYS ASN ARG TRP GLU HIS SEQRES 14 B 329 PHE ALA PHE ILE GLU GLY GLU PRO LEU GLU THR THR ILE SEQRES 15 B 329 GLN VAL GLY ALA MSE GLY LYS LEU GLU ASP GLU ILE MSE SEQRES 16 B 329 LYS ALA GLY LEU GLN PRO ARG ASP ILE ASN PHE LEU THR SEQRES 17 B 329 ILE GLU GLY LYS LEU ASP ASN ALA ASP PHE LYS LEU ILE SEQRES 18 B 329 ARG ASP TYR MSE PRO ASN LEU VAL SER LEU ASP ILE SER SEQRES 19 B 329 LYS THR ASN ALA THR THR ILE PRO ASP PHE THR PHE ALA SEQRES 20 B 329 GLN LYS LYS TYR LEU LEU LYS ILE LYS LEU PRO HIS ASN SEQRES 21 B 329 LEU LYS THR ILE GLY GLN ARG VAL PHE SER ASN CYS GLY SEQRES 22 B 329 ARG LEU ALA GLY THR LEU GLU LEU PRO ALA SER VAL THR SEQRES 23 B 329 ALA ILE GLU PHE GLY ALA PHE MSE GLY CYS ASP ASN LEU SEQRES 24 B 329 ARG TYR VAL LEU ALA THR GLY ASP LYS ILE THR THR LEU SEQRES 25 B 329 GLY ASP GLU LEU PHE GLY ASN GLY VAL PRO SER LYS LEU SEQRES 26 B 329 ILE TYR LYS LYS MODRES 3SB4 MSE A 38 MET SELENOMETHIONINE MODRES 3SB4 MSE A 39 MET SELENOMETHIONINE MODRES 3SB4 MSE A 83 MET SELENOMETHIONINE MODRES 3SB4 MSE A 100 MET SELENOMETHIONINE MODRES 3SB4 MSE A 207 MET SELENOMETHIONINE MODRES 3SB4 MSE A 215 MET SELENOMETHIONINE MODRES 3SB4 MSE A 245 MET SELENOMETHIONINE MODRES 3SB4 MSE A 314 MET SELENOMETHIONINE MODRES 3SB4 MSE B 38 MET SELENOMETHIONINE MODRES 3SB4 MSE B 39 MET SELENOMETHIONINE MODRES 3SB4 MSE B 83 MET SELENOMETHIONINE MODRES 3SB4 MSE B 100 MET SELENOMETHIONINE MODRES 3SB4 MSE B 207 MET SELENOMETHIONINE MODRES 3SB4 MSE B 215 MET SELENOMETHIONINE MODRES 3SB4 MSE B 245 MET SELENOMETHIONINE MODRES 3SB4 MSE B 314 MET SELENOMETHIONINE HET MSE A 38 8 HET MSE A 39 16 HET MSE A 83 8 HET MSE A 100 8 HET MSE A 207 8 HET MSE A 215 16 HET MSE A 245 13 HET MSE A 314 8 HET MSE B 38 8 HET MSE B 39 16 HET MSE B 83 8 HET MSE B 100 13 HET MSE B 207 8 HET MSE B 215 13 HET MSE B 245 16 HET MSE B 314 16 HET GOL A 351 6 HET GOL A 353 6 HET GOL A 354 6 HET GOL A 355 6 HET GOL A 357 6 HET GOL A 358 6 HET GOL A 359 6 HET GOL A 361 6 HET GOL A 362 6 HET GOL B 350 6 HET GOL B 352 6 HET GOL B 356 6 HET GOL B 360 6 HET PG4 B 363 13 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 3 GOL 13(C3 H8 O3) FORMUL 16 PG4 C8 H18 O5 FORMUL 17 HOH *417(H2 O) HELIX 1 1 THR A 34 MSE A 39 5 6 HELIX 2 2 THR A 40 ILE A 47 1 8 HELIX 3 3 ASN A 57 GLU A 67 1 11 HELIX 4 4 TYR A 91 LYS A 95 5 5 HELIX 5 5 SER A 178 PHE A 183 1 6 HELIX 6 6 LYS A 209 ALA A 217 1 9 HELIX 7 7 GLN A 220 ILE A 224 5 5 HELIX 8 8 ASP A 234 MSE A 245 1 12 HELIX 9 9 THR B 34 MSE B 39 5 6 HELIX 10 10 THR B 40 ILE B 47 1 8 HELIX 11 11 ASN B 57 GLU B 67 1 11 HELIX 12 12 TYR B 91 LYS B 95 5 5 HELIX 13 13 SER B 178 PHE B 183 1 6 HELIX 14 14 LYS B 209 ALA B 217 1 9 HELIX 15 15 GLN B 220 ILE B 224 5 5 HELIX 16 16 ASP B 234 MSE B 245 1 12 SHEET 1 A 7 SER A 24 VAL A 29 0 SHEET 2 A 7 HIS A 49 LEU A 56 1 O LYS A 55 N VAL A 29 SHEET 3 A 7 VAL A 73 ILE A 81 1 O GLU A 80 N LEU A 56 SHEET 4 A 7 LYS A 125 LEU A 128 1 O ILE A 127 N ILE A 76 SHEET 5 A 7 ILE A 148 ILE A 151 1 O GLN A 150 N VAL A 126 SHEET 6 A 7 ALA A 170 ILE A 173 1 O PHE A 172 N ILE A 151 SHEET 7 A 7 PHE A 192 GLU A 194 1 O ILE A 193 N ILE A 171 SHEET 1 B 2 TYR A 84 GLY A 86 0 SHEET 2 B 2 TYR A 97 TYR A 99 -1 O TYR A 99 N TYR A 84 SHEET 1 C 3 PHE A 103 VAL A 104 0 SHEET 2 C 3 ASN A 134 ILE A 135 1 O ASN A 134 N VAL A 104 SHEET 3 C 3 ASN A 158 LEU A 159 1 O ASN A 158 N ILE A 135 SHEET 1 D 2 SER A 110 VAL A 113 0 SHEET 2 D 2 VAL A 116 GLY A 119 -1 O VAL A 116 N VAL A 113 SHEET 1 E 4 GLU A 199 VAL A 204 0 SHEET 2 E 4 PHE A 226 GLY A 231 1 O THR A 228 N ILE A 202 SHEET 3 E 4 SER A 250 ASP A 252 1 O ASP A 252 N LEU A 227 SHEET 4 E 4 LYS A 274 LYS A 276 1 O LYS A 274 N LEU A 251 SHEET 1 F 4 THR A 260 ILE A 261 0 SHEET 2 F 4 THR A 283 ILE A 284 1 O THR A 283 N ILE A 261 SHEET 3 F 4 ALA A 307 ILE A 308 1 O ALA A 307 N ILE A 284 SHEET 4 F 4 THR A 331 LEU A 332 1 O THR A 331 N ILE A 308 SHEET 1 G 3 GLY A 297 LEU A 301 0 SHEET 2 G 3 LEU A 319 ALA A 324 1 O LEU A 323 N LEU A 301 SHEET 3 G 3 LEU A 345 TYR A 347 1 O ILE A 346 N ALA A 324 SHEET 1 H 7 SER B 24 VAL B 29 0 SHEET 2 H 7 HIS B 49 LEU B 56 1 O LYS B 55 N VAL B 29 SHEET 3 H 7 VAL B 73 ILE B 81 1 O GLU B 80 N GLY B 54 SHEET 4 H 7 LYS B 125 LEU B 128 1 O ILE B 127 N ILE B 76 SHEET 5 H 7 ILE B 148 ILE B 151 1 O GLN B 150 N VAL B 126 SHEET 6 H 7 ALA B 170 ILE B 173 1 O PHE B 172 N ILE B 151 SHEET 7 H 7 PHE B 192 GLU B 194 1 O ILE B 193 N ILE B 171 SHEET 1 I 2 TYR B 84 GLY B 86 0 SHEET 2 I 2 TYR B 97 TYR B 99 -1 O TYR B 99 N TYR B 84 SHEET 1 J 3 PHE B 103 VAL B 104 0 SHEET 2 J 3 ASN B 134 ILE B 135 1 O ASN B 134 N VAL B 104 SHEET 3 J 3 ASN B 158 LEU B 159 1 O ASN B 158 N ILE B 135 SHEET 1 K 2 SER B 110 VAL B 113 0 SHEET 2 K 2 VAL B 116 GLY B 119 -1 O VAL B 116 N VAL B 113 SHEET 1 L 4 GLU B 199 VAL B 204 0 SHEET 2 L 4 PHE B 226 GLY B 231 1 O THR B 228 N ILE B 202 SHEET 3 L 4 SER B 250 ASP B 252 1 O ASP B 252 N LEU B 227 SHEET 4 L 4 LYS B 274 LYS B 276 1 O LYS B 276 N LEU B 251 SHEET 1 M 4 THR B 260 ILE B 261 0 SHEET 2 M 4 THR B 283 ILE B 284 1 O THR B 283 N ILE B 261 SHEET 3 M 4 ALA B 307 ILE B 308 1 O ALA B 307 N ILE B 284 SHEET 4 M 4 THR B 331 LEU B 332 1 O THR B 331 N ILE B 308 SHEET 1 N 3 GLY B 297 LEU B 301 0 SHEET 2 N 3 LEU B 319 ALA B 324 1 O LEU B 323 N LEU B 301 SHEET 3 N 3 LEU B 345 TYR B 347 1 O ILE B 346 N ALA B 324 LINK C SER A 37 N MSE A 38 1555 1555 1.34 LINK C MSE A 38 N AMSE A 39 1555 1555 1.34 LINK C MSE A 38 N BMSE A 39 1555 1555 1.33 LINK C AMSE A 39 N THR A 40 1555 1555 1.33 LINK C BMSE A 39 N THR A 40 1555 1555 1.33 LINK C LYS A 82 N MSE A 83 1555 1555 1.32 LINK C MSE A 83 N TYR A 84 1555 1555 1.32 LINK C TYR A 99 N MSE A 100 1555 1555 1.34 LINK C MSE A 100 N ALA A 101 1555 1555 1.33 LINK C ALA A 206 N MSE A 207 1555 1555 1.34 LINK C MSE A 207 N GLY A 208 1555 1555 1.33 LINK C ILE A 214 N AMSE A 215 1555 1555 1.35 LINK C ILE A 214 N BMSE A 215 1555 1555 1.35 LINK C AMSE A 215 N LYS A 216 1555 1555 1.35 LINK C BMSE A 215 N LYS A 216 1555 1555 1.35 LINK C TYR A 244 N MSE A 245 1555 1555 1.35 LINK C MSE A 245 N PRO A 246 1555 1555 1.36 LINK C PHE A 313 N MSE A 314 1555 1555 1.34 LINK C MSE A 314 N GLY A 315 1555 1555 1.32 LINK C SER B 37 N MSE B 38 1555 1555 1.34 LINK C MSE B 38 N AMSE B 39 1555 1555 1.32 LINK C MSE B 38 N BMSE B 39 1555 1555 1.32 LINK C AMSE B 39 N THR B 40 1555 1555 1.34 LINK C BMSE B 39 N THR B 40 1555 1555 1.34 LINK C LYS B 82 N MSE B 83 1555 1555 1.33 LINK C MSE B 83 N TYR B 84 1555 1555 1.32 LINK C TYR B 99 N MSE B 100 1555 1555 1.34 LINK C MSE B 100 N ALA B 101 1555 1555 1.33 LINK C ALA B 206 N MSE B 207 1555 1555 1.34 LINK C MSE B 207 N GLY B 208 1555 1555 1.33 LINK C ILE B 214 N MSE B 215 1555 1555 1.35 LINK C MSE B 215 N LYS B 216 1555 1555 1.36 LINK C TYR B 244 N AMSE B 245 1555 1555 1.32 LINK C TYR B 244 N BMSE B 245 1555 1555 1.32 LINK C AMSE B 245 N PRO B 246 1555 1555 1.36 LINK C BMSE B 245 N PRO B 246 1555 1555 1.34 LINK C PHE B 313 N AMSE B 314 1555 1555 1.35 LINK C PHE B 313 N BMSE B 314 1555 1555 1.35 LINK C AMSE B 314 N GLY B 315 1555 1555 1.34 LINK C BMSE B 314 N GLY B 315 1555 1555 1.34 SITE 1 AC1 3 SER A 30 LYS A 55 HOH A 586 SITE 1 AC2 3 TYR A 91 TYR A 107 ASN B 185 SITE 1 AC3 6 LYS A 274 ILE A 275 LEU A 295 ALA A 296 SITE 2 AC3 6 THR A 298 LEU A 299 SITE 1 AC4 4 GLY A 115 THR A 117 LYS A 141 HIS B 189 SITE 1 AC5 2 GLU A 211 TYR A 244 SITE 1 AC6 3 GLU A 124 LYS A 147 GLU A 199 SITE 1 AC7 5 LYS A 125 ILE A 148 PRO A 197 LEU A 198 SITE 2 AC7 5 GLU A 199 SITE 1 AC8 4 ARG A 320 TYR A 321 HOH A 635 HOH A 767 SITE 1 AC9 4 ASP A 234 ASN A 235 ALA A 236 HOH A 686 SITE 1 BC1 4 GLU B 211 PRO B 221 TYR B 244 HOH B 756 SITE 1 BC2 4 LYS B 147 LEU B 227 SER B 250 ASP B 252 SITE 1 BC3 2 MSE B 100 PHE B 103 SITE 1 BC4 4 LYS B 270 TYR B 271 ARG B 294 HOH B 592 SITE 1 BC5 11 GLU A 41 GLU A 59 ARG A 62 HIS A 63 SITE 2 BC5 11 HOH A 666 LYS B 255 THR B 256 ASN B 257 SITE 3 BC5 11 THR B 259 HIS B 279 ASN B 280 CRYST1 52.210 62.130 66.860 109.80 93.75 91.05 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019153 0.000351 0.001463 0.00000 SCALE2 0.000000 0.016098 0.005834 0.00000 SCALE3 0.000000 0.000000 0.015943 0.00000 MASTER 421 0 30 16 50 0 18 6 0 0 0 52 END