HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 23-MAY-11 3S5T TITLE CRYSTAL STRUCTURE OF A MEMBER OF DUF3298 FAMILY (BF2082) FROM TITLE 2 BACTEROIDES FRAGILIS NCTC 9343 AT 2.30 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: DUF3298 FAMILY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES FRAGILIS; SOURCE 3 ORGANISM_TAXID: 272559; SOURCE 4 STRAIN: NCTC 9343; SOURCE 5 GENE: BF2082; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PEPTIDOGLYCAN DEACETYLASE N-TERMINAL NONCATALYTIC REGION, STRUCTURAL KEYWDS 2 GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, PSI-BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 24-JAN-18 3S5T 1 JRNL REVDAT 4 25-OCT-17 3S5T 1 REMARK REVDAT 3 16-NOV-11 3S5T 1 TITLE REVDAT 2 20-JUL-11 3S5T 1 TITLE REVDAT 1 29-JUN-11 3S5T 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A MEMBER OF DUF3298 FAMILY (BF2082) JRNL TITL 2 FROM BACTEROIDES FRAGILIS NCTC 9343 AT 2.30 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 15929 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 794 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.46 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2822 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2067 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2690 REMARK 3 BIN R VALUE (WORKING SET) : 0.2060 REMARK 3 BIN FREE R VALUE : 0.2201 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.68 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 132 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2027 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 55 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.88100 REMARK 3 B22 (A**2) : -0.88100 REMARK 3 B33 (A**2) : 1.76200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2144 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2920 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 966 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 60 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 306 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2144 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 1 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 278 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2476 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.06 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.34 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.82 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|28 - 284 } REMARK 3 ORIGIN FOR THE GROUP (A): -14.4734 77.2567 7.4522 REMARK 3 T TENSOR REMARK 3 T11: -0.2316 T22: 0.0716 REMARK 3 T33: -0.1524 T12: 0.0312 REMARK 3 T13: -0.0173 T23: -0.0260 REMARK 3 L TENSOR REMARK 3 L11: 2.5648 L22: 1.3425 REMARK 3 L33: 1.8410 L12: 0.7705 REMARK 3 L13: 0.8604 L23: 0.2924 REMARK 3 S TENSOR REMARK 3 S11: 0.0621 S12: 0.0310 S13: -0.2061 REMARK 3 S21: -0.0601 S22: 0.1102 S23: -0.3203 REMARK 3 S31: 0.0725 S32: 0.6375 S33: -0.1723 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 3. MPD,CL, PO4 MODELED ARE PRESENT IN PROTEIN/ REMARK 3 CRYSTALLIZATION/ CRYO CONDITIONS. 4. ATOM RECORD CONTAINS SUM OF REMARK 3 TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS REMARK 3 AND RESIDUAL U FACTORS. REMARK 4 REMARK 4 3S5T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000065797. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97915,0.97892 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15972 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 29.298 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06500 REMARK 200 FOR THE DATA SET : 16.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.73100 REMARK 200 R SYM FOR SHELL (I) : 0.73100 REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10.0% 2-METHYL-2,4-PENTANEDIOL, 0.2M REMARK 280 LITHIUM SULFATE, 0.1M PHOSPHATE-CITRATE PH 4.2, NANODROP, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.75333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.37667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 60.56500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 20.18833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 100.94167 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 80.75333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 40.37667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 20.18833 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 60.56500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 100.94167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A REMARK 300 DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -83.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 170.31256 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 SER A 21 REMARK 465 CYS A 22 REMARK 465 GLY A 23 REMARK 465 ASP A 24 REMARK 465 LYS A 25 REMARK 465 MSE A 26 REMARK 465 ASN A 27 REMARK 465 GLU A 125 REMARK 465 SER A 126 REMARK 465 GLU A 127 REMARK 465 GLY A 128 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 28 CG CD CE NZ REMARK 470 LYS A 71 CD CE NZ REMARK 470 LYS A 122 CE NZ REMARK 470 LYS A 124 CG CD CE NZ REMARK 470 ASP A 193 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 149 -110.70 47.95 REMARK 500 TYR A 249 -27.05 85.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 285 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 286 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 287 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 288 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 289 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 290 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 390146 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (RESIDUES 21-284) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3S5T A 21 284 UNP Q5LDM9 Q5LDM9_BACFN 21 284 SEQADV 3S5T GLY A 0 UNP Q5LDM9 LEADER SEQUENCE SEQRES 1 A 265 GLY SER CYS GLY ASP LYS MSE ASN LYS ASN THR GLY ALA SEQRES 2 A 265 LEU GLU PHE ASP SER ILE GLN VAL ASN GLU THR ALA HIS SEQRES 3 A 265 LEU PHE GLY ASP THR ALA LYS PRO ALA CYS ASN LEU THR SEQRES 4 A 265 ILE ASN PHE ALA TYR PRO VAL LYS SER THR ASP ASN LYS SEQRES 5 A 265 LEU LYS ASP SER LEU ASN SER TYR PHE ILE ALA ALA CYS SEQRES 6 A 265 PHE GLY GLU GLY TYR ILE GLY GLU LYS PRO ALA GLN VAL SEQRES 7 A 265 VAL LYS GLU TYR THR GLU HIS TYR VAL LYS GLU TYR ARG SEQRES 8 A 265 THR ASP LEU GLU PRO MSE TYR ALA GLU ASP GLU LYS ASN SEQRES 9 A 265 LYS GLU SER GLU GLY SER ILE GLY ALA TRP TYR SER TYR SEQRES 10 A 265 TYR LYS GLY ILE GLU SER HIS VAL GLN LEU TYR TYR LYS SEQRES 11 A 265 ASN LEU LEU VAL TYR ARG ILE ASN TYR ASN GLU TYR THR SEQRES 12 A 265 GLY GLY ALA HIS GLY ILE TYR MSE THR THR PHE LEU ASN SEQRES 13 A 265 MSE ASP LEU ILE ASN LEU ARG PRO LEU LYS LEU ASP ASP SEQRES 14 A 265 ILE PHE THR GLY ASP TYR LYS GLU ALA LEU THR ASP LEU SEQRES 15 A 265 LEU TRP ASN GLN LEU MSE ALA ASP LYS LYS VAL THR THR SEQRES 16 A 265 HIS GLU ALA LEU GLU ASP MSE GLY TYR GLY SER THR GLY SEQRES 17 A 265 ASP ILE ALA PRO THR GLU ASN PHE TYR LEU ASP LYS ASP SEQRES 18 A 265 GLY ILE THR PHE TYR TYR ASN VAL TYR ASP ILE THR PRO SEQRES 19 A 265 TYR ALA MSE GLY PRO VAL GLU ILE LYS ILE PRO TYR GLU SEQRES 20 A 265 MSE MSE GLU HIS MSE LEU GLY SER ASN PRO ILE ILE GLY SEQRES 21 A 265 GLU MSE LYS SER LYS MODRES 3S5T MSE A 116 MET SELENOMETHIONINE MODRES 3S5T MSE A 170 MET SELENOMETHIONINE MODRES 3S5T MSE A 176 MET SELENOMETHIONINE MODRES 3S5T MSE A 207 MET SELENOMETHIONINE MODRES 3S5T MSE A 221 MET SELENOMETHIONINE MODRES 3S5T MSE A 256 MET SELENOMETHIONINE MODRES 3S5T MSE A 267 MET SELENOMETHIONINE MODRES 3S5T MSE A 268 MET SELENOMETHIONINE MODRES 3S5T MSE A 271 MET SELENOMETHIONINE MODRES 3S5T MSE A 281 MET SELENOMETHIONINE HET MSE A 116 13 HET MSE A 170 8 HET MSE A 176 8 HET MSE A 207 8 HET MSE A 221 8 HET MSE A 256 8 HET MSE A 267 8 HET MSE A 268 8 HET MSE A 271 8 HET MSE A 281 8 HET PO4 A 285 5 HET PO4 A 286 5 HET MPD A 287 8 HET MPD A 288 8 HET MPD A 289 8 HET CL A 290 1 HETNAM MSE SELENOMETHIONINE HETNAM PO4 PHOSPHATE ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM CL CHLORIDE ION FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 2 PO4 2(O4 P 3-) FORMUL 4 MPD 3(C6 H14 O2) FORMUL 7 CL CL 1- FORMUL 8 HOH *55(H2 O) HELIX 1 1 PHE A 47 ASP A 49 5 3 HELIX 2 2 ASP A 69 PHE A 85 1 17 HELIX 3 3 GLY A 86 ILE A 90 5 5 HELIX 4 4 LYS A 93 LYS A 124 1 32 HELIX 5 5 LYS A 185 PHE A 190 1 6 HELIX 6 6 TYR A 194 LYS A 210 1 17 HELIX 7 7 THR A 214 MSE A 221 1 8 HELIX 8 8 PRO A 253 GLY A 257 5 5 HELIX 9 9 GLU A 266 MSE A 268 5 3 HELIX 10 10 ASN A 275 LYS A 284 1 10 SHEET 1 A 6 GLU A 34 HIS A 45 0 SHEET 2 A 6 ALA A 54 LYS A 66 -1 O ILE A 59 N VAL A 40 SHEET 3 A 6 TYR A 136 TYR A 148 1 O SER A 142 N ASN A 60 SHEET 4 A 6 LEU A 151 TYR A 161 -1 O ASN A 157 N GLU A 141 SHEET 5 A 6 ILE A 168 ASP A 177 -1 O MSE A 170 N TYR A 158 SHEET 6 A 6 ARG A 182 PRO A 183 -1 O ARG A 182 N ASP A 177 SHEET 1 B 3 PHE A 235 LEU A 237 0 SHEET 2 B 3 GLY A 241 TYR A 246 -1 O THR A 243 N TYR A 236 SHEET 3 B 3 VAL A 259 PRO A 264 -1 O VAL A 259 N TYR A 246 LINK C PRO A 115 N MSE A 116 1555 1555 1.34 LINK C MSE A 116 N TYR A 117 1555 1555 1.35 LINK C TYR A 169 N MSE A 170 1555 1555 1.32 LINK C MSE A 170 N THR A 171 1555 1555 1.33 LINK C ASN A 175 N MSE A 176 1555 1555 1.34 LINK C MSE A 176 N ASP A 177 1555 1555 1.34 LINK C LEU A 206 N MSE A 207 1555 1555 1.35 LINK C MSE A 207 N ALA A 208 1555 1555 1.35 LINK C ASP A 220 N MSE A 221 1555 1555 1.34 LINK C MSE A 221 N GLY A 222 1555 1555 1.34 LINK C ALA A 255 N MSE A 256 1555 1555 1.34 LINK C MSE A 256 N GLY A 257 1555 1555 1.32 LINK C GLU A 266 N MSE A 267 1555 1555 1.32 LINK C MSE A 267 N MSE A 268 1555 1555 1.34 LINK C MSE A 268 N GLU A 269 1555 1555 1.35 LINK C HIS A 270 N MSE A 271 1555 1555 1.32 LINK C MSE A 271 N LEU A 272 1555 1555 1.35 LINK C GLU A 280 N MSE A 281 1555 1555 1.35 LINK C MSE A 281 N LYS A 282 1555 1555 1.35 SITE 1 AC1 3 SER A 78 TYR A 79 GLU A 87 SITE 1 AC2 1 LYS A 73 SITE 1 AC3 4 GLU A 108 TYR A 136 MPD A 288 HOH A 339 SITE 1 AC4 6 ASP A 112 LEU A 113 TYR A 136 HIS A 166 SITE 2 AC4 6 TYR A 249 MPD A 287 SITE 1 AC5 6 PHE A 47 GLY A 48 ARG A 110 GLU A 114 SITE 2 AC5 6 GLU A 119 ASN A 123 SITE 1 AC6 2 HIS A 45 ARG A 110 CRYST1 98.330 98.330 121.130 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010170 0.005872 0.000000 0.00000 SCALE2 0.000000 0.011743 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008256 0.00000 MASTER 360 0 16 10 9 0 8 6 0 0 0 21 END