HEADER METAL BINDING PROTEIN 10-MAR-11 3R1M TITLE STRUCTURE OF BIFUNCTIONAL FRUCTOSE 1,6-BISPHOSPHATE TITLE 2 ALDOLASE/PHOSPHATASE (ALDOLASE FORM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN ST0318; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS TOKODAII; SOURCE 3 ORGANISM_TAXID: 273063; SOURCE 4 STRAIN: 7; SOURCE 5 GENE: ST0318; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET17B KEYWDS SULFOLOBUS FRUCTOSE-1,6-BISPHOSPHATASE-LIKE FOLD, HYDROLASE/ALDOLASE, KEYWDS 2 MG BINDING, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.FUSHINOBU,H.NISHIMASU,D.HATTORI,H.-J.SONG,T.WAKAGI REVDAT 4 08-FEB-17 3R1M 1 TITLE REVDAT 3 09-NOV-11 3R1M 1 JRNL REVDAT 2 26-OCT-11 3R1M 1 TITLE REVDAT 1 12-OCT-11 3R1M 0 JRNL AUTH S.FUSHINOBU,H.NISHIMASU,D.HATTORI,H.-J.SONG,T.WAKAGI JRNL TITL STRUCTURAL BASIS FOR THE BIFUNCTIONALITY OF JRNL TITL 2 FRUCTOSE-1,6-BISPHOSPHATE ALDOLASE/PHOSPHATASE. JRNL REF NATURE V. 478 538 2011 JRNL REFN ISSN 0028-0836 JRNL PMID 21983966 JRNL DOI 10.1038/NATURE10457 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0066 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.22 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 74120 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3922 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5434 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 294 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2770 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 264 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.067 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.067 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.042 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.116 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2876 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3907 ; 1.431 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 362 ; 6.214 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 127 ;34.045 ;23.543 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 476 ;12.153 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;15.400 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 430 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2193 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1787 ; 0.786 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2878 ; 1.367 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1089 ; 2.185 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1026 ; 3.454 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3R1M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-MAR-11. REMARK 100 THE RCSB ID CODE IS RCSB064375. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NUMERICAL LINK TYPE SI(111) REMARK 200 DOUBLE CRYSTAL MONOCHROMATOR, REMARK 200 LIQUID NITROGEN COOLING REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78613 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 14.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06400 REMARK 200 FOR THE DATA SET : 51.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.53100 REMARK 200 FOR SHELL : 5.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1UMG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 20000, 0.1M BICINE PH 9.0, 2% REMARK 280 DIOXANE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 56.27150 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 56.27150 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 76.80400 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 56.27150 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 56.27150 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 76.80400 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 56.27150 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 56.27150 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 76.80400 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 56.27150 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 56.27150 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 76.80400 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 56.27150 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 56.27150 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 76.80400 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 56.27150 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 56.27150 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 76.80400 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 56.27150 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 56.27150 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 76.80400 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 56.27150 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 56.27150 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 76.80400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 55340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 74490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -612.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 112.54300 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 112.54300 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 112.54300 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 112.54300 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 112.54300 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 112.54300 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 8 0.000000 -1.000000 0.000000 112.54300 REMARK 350 BIOMT2 8 -1.000000 0.000000 0.000000 112.54300 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 630 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ILE A 354 REMARK 465 LEU A 355 REMARK 465 GLU A 356 REMARK 465 LYS A 357 REMARK 465 LEU A 358 REMARK 465 LYS A 359 REMARK 465 ASP A 360 REMARK 465 GLU A 365 REMARK 465 SER A 366 REMARK 465 ASP A 367 REMARK 465 VAL A 368 REMARK 465 TYR A 369 REMARK 465 LYS A 370 REMARK 465 ALA A 371 REMARK 465 LYS A 372 REMARK 465 GLU A 373 REMARK 465 SER A 374 REMARK 465 ILE A 375 REMARK 465 TYR A 376 REMARK 465 ALA A 377 REMARK 465 LYS A 378 REMARK 465 GLU A 379 REMARK 465 GLU A 380 REMARK 465 SER A 381 REMARK 465 GLN A 382 REMARK 465 GLY A 383 REMARK 465 HIS A 384 REMARK 465 ASP A 385 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 135 O HOH A 575 1.95 REMARK 500 O HOH A 496 O HOH A 653 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 291 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 19 45.71 -87.18 REMARK 500 LYS A 133 32.44 75.40 REMARK 500 ASP A 234 81.53 61.76 REMARK 500 GLN A 242 178.36 69.00 REMARK 500 TRP A 264 -147.58 52.65 REMARK 500 THR A 284 -98.62 -130.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 404 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 13P A 401 O3P REMARK 620 2 ASP A 53 OD2 87.6 REMARK 620 3 HOH A 387 O 171.3 99.9 REMARK 620 4 ASP A 12 OD2 89.4 85.2 87.0 REMARK 620 5 GLN A 95 OE1 92.5 165.6 79.1 80.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 13P A 401 O2P REMARK 620 2 ASP A 53 OD1 87.3 REMARK 620 3 ASP A 132 OD1 94.9 97.2 REMARK 620 4 ASP A 54 OD2 176.3 89.4 87.1 REMARK 620 5 HOH A 386 O 90.5 92.7 168.9 88.1 REMARK 620 6 ASP A 234 OD2 92.4 166.5 96.3 90.5 73.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 232 O REMARK 620 2 HOH A 389 O 81.7 REMARK 620 3 HOH A 388 O 104.2 89.1 REMARK 620 4 13P A 401 O1P 97.9 173.1 84.3 REMARK 620 5 ASP A 234 OD2 91.4 96.1 164.1 90.9 REMARK 620 6 HOH A 386 O 158.8 88.1 94.1 94.4 71.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 13P A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1UMG RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN A FBPASE MODE DBREF 3R1M A 1 385 UNP Q975V5 Q975V5_SULTO 1 385 SEQRES 1 A 385 MET MET LYS THR THR ILE SER VAL ILE LYS ALA ASP ILE SEQRES 2 A 385 GLY SER LEU ALA GLY HIS HIS ILE VAL HIS PRO ASP THR SEQRES 3 A 385 MET ALA ALA ALA ASN LYS VAL LEU ALA SER ALA LYS GLU SEQRES 4 A 385 GLN GLY ILE ILE LEU ASP TYR TYR ILE THR HIS VAL GLY SEQRES 5 A 385 ASP ASP LEU GLN LEU ILE MET THR HIS THR ARG GLY GLU SEQRES 6 A 385 LEU ASP THR LYS VAL HIS GLU THR ALA TRP ASN ALA PHE SEQRES 7 A 385 LYS GLU ALA ALA LYS VAL ALA LYS ASP LEU GLY LEU TYR SEQRES 8 A 385 ALA ALA GLY GLN ASP LEU LEU SER ASP SER PHE SER GLY SEQRES 9 A 385 ASN VAL ARG GLY LEU GLY PRO GLY VAL ALA GLU MET GLU SEQRES 10 A 385 ILE GLU GLU ARG ALA SER GLU PRO ILE ALA ILE PHE MET SEQRES 11 A 385 ALA ASP LYS THR GLU PRO GLY ALA TYR ASN LEU PRO LEU SEQRES 12 A 385 TYR LYS MET PHE ALA ASP PRO PHE ASN THR PRO GLY LEU SEQRES 13 A 385 VAL ILE ASP PRO THR MET HIS GLY GLY PHE LYS PHE GLU SEQRES 14 A 385 VAL LEU ASP VAL TYR GLN GLY GLU ALA VAL MET LEU SER SEQRES 15 A 385 ALA PRO GLN GLU ILE TYR ASP LEU LEU ALA LEU ILE GLY SEQRES 16 A 385 THR PRO ALA ARG TYR VAL ILE ARG ARG VAL TYR ARG ASN SEQRES 17 A 385 GLU ASP ASN LEU LEU ALA ALA VAL VAL SER ILE GLU ARG SEQRES 18 A 385 LEU ASN LEU ILE ALA GLY LYS TYR VAL GLY LYS ASP ASP SEQRES 19 A 385 PRO VAL MET ILE VAL ARG LEU GLN HIS GLY LEU PRO ALA SEQRES 20 A 385 LEU GLY GLU ALA LEU GLU ALA PHE ALA PHE PRO HIS LEU SEQRES 21 A 385 VAL PRO GLY TRP MET ARG GLY SER HIS TYR GLY PRO LEU SEQRES 22 A 385 MET PRO VAL SER GLN ARG ASP ALA LYS ALA THR ARG PHE SEQRES 23 A 385 ASP GLY PRO PRO ARG LEU LEU GLY LEU GLY PHE ASN VAL SEQRES 24 A 385 LYS ASN GLY ARG LEU VAL GLY PRO THR ASP LEU PHE ASP SEQRES 25 A 385 ASP PRO ALA PHE ASP GLU THR ARG ARG LEU ALA ASN ILE SEQRES 26 A 385 VAL ALA ASP TYR MET ARG ARG HIS GLY PRO PHE MET PRO SEQRES 27 A 385 HIS ARG LEU GLU PRO THR GLU MET GLU TYR THR THR LEU SEQRES 28 A 385 PRO LEU ILE LEU GLU LYS LEU LYS ASP ARG PHE LYS LYS SEQRES 29 A 385 GLU SER ASP VAL TYR LYS ALA LYS GLU SER ILE TYR ALA SEQRES 30 A 385 LYS GLU GLU SER GLN GLY HIS ASP HET 13P A 401 9 HET MG A 402 1 HET MG A 403 1 HET MG A 404 1 HET MPD A 405 8 HETNAM 13P 1,3-DIHYDROXYACETONEPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 2 13P C3 H7 O6 P FORMUL 3 MG 3(MG 2+) FORMUL 6 MPD C6 H14 O2 FORMUL 7 HOH *264(H2 O) HELIX 1 1 HIS A 23 GLN A 40 1 18 HELIX 2 2 ASP A 67 LEU A 88 1 22 HELIX 3 3 GLU A 135 ALA A 138 5 4 HELIX 4 4 TYR A 139 ASP A 149 1 11 HELIX 5 5 PRO A 154 ASP A 159 1 6 HELIX 6 6 GLU A 186 GLY A 195 1 10 HELIX 7 7 ARG A 221 GLY A 227 1 7 HELIX 8 8 ALA A 247 ALA A 254 1 8 HELIX 9 9 TRP A 264 SER A 268 5 5 HELIX 10 10 THR A 284 GLY A 288 5 5 HELIX 11 11 ASP A 313 ALA A 315 5 3 HELIX 12 12 PHE A 316 ARG A 332 1 17 HELIX 13 13 GLU A 342 GLU A 347 1 6 SHEET 1 A 4 ASP A 45 VAL A 51 0 SHEET 2 A 4 ASP A 54 HIS A 61 -1 O GLN A 56 N THR A 49 SHEET 3 A 4 THR A 4 ALA A 11 -1 N SER A 7 O MET A 59 SHEET 4 A 4 GLY A 112 ILE A 118 -1 O ALA A 114 N VAL A 8 SHEET 1 B 8 GLU A 177 SER A 182 0 SHEET 2 B 8 PHE A 166 ASP A 172 -1 N ASP A 172 O GLU A 177 SHEET 3 B 8 TYR A 200 ARG A 207 -1 O ARG A 203 N GLU A 169 SHEET 4 B 8 LEU A 213 VAL A 217 -1 O ALA A 214 N VAL A 205 SHEET 5 B 8 VAL A 236 ARG A 240 -1 O ARG A 240 N ALA A 214 SHEET 6 B 8 PRO A 125 ASP A 132 -1 N ALA A 127 O VAL A 239 SHEET 7 B 8 ARG A 291 LYS A 300 -1 O LEU A 293 N MET A 130 SHEET 8 B 8 MET A 274 VAL A 276 1 N VAL A 276 O LEU A 292 SHEET 1 C 8 GLU A 177 SER A 182 0 SHEET 2 C 8 PHE A 166 ASP A 172 -1 N ASP A 172 O GLU A 177 SHEET 3 C 8 TYR A 200 ARG A 207 -1 O ARG A 203 N GLU A 169 SHEET 4 C 8 LEU A 213 VAL A 217 -1 O ALA A 214 N VAL A 205 SHEET 5 C 8 VAL A 236 ARG A 240 -1 O ARG A 240 N ALA A 214 SHEET 6 C 8 PRO A 125 ASP A 132 -1 N ALA A 127 O VAL A 239 SHEET 7 C 8 ARG A 291 LYS A 300 -1 O LEU A 293 N MET A 130 SHEET 8 C 8 ARG A 303 ASP A 309 -1 O VAL A 305 N ASN A 298 SHEET 1 D 2 LEU A 260 GLY A 263 0 SHEET 2 D 2 HIS A 269 PRO A 272 -1 O GLY A 271 N VAL A 261 LINK NZ LYS A 232 C2 13P A 401 1555 1555 1.39 LINK O3P 13P A 401 MG MG A 404 1555 1555 1.95 LINK O2P 13P A 401 MG MG A 403 1555 1555 2.01 LINK O LYS A 232 MG MG A 402 1555 1555 2.02 LINK OD1 ASP A 53 MG MG A 403 1555 1555 2.03 LINK OD1 ASP A 132 MG MG A 403 1555 1555 2.04 LINK OD2 ASP A 54 MG MG A 403 1555 1555 2.04 LINK OD2 ASP A 53 MG MG A 404 1555 1555 2.06 LINK MG MG A 402 O HOH A 389 1555 1555 2.07 LINK MG MG A 404 O HOH A 387 1555 1555 2.08 LINK MG MG A 402 O HOH A 388 1555 1555 2.09 LINK OD2 ASP A 12 MG MG A 404 1555 1555 2.10 LINK MG MG A 403 O HOH A 386 1555 1555 2.12 LINK O1P 13P A 401 MG MG A 402 1555 1555 2.12 LINK OD2 ASP A 234 MG MG A 403 1555 1555 2.13 LINK OD2 ASP A 234 MG MG A 402 1555 1555 2.16 LINK OE1 GLN A 95 MG MG A 404 1555 1555 2.18 LINK MG MG A 402 O HOH A 386 1555 1555 2.21 CISPEP 1 ALA A 183 PRO A 184 0 4.06 CISPEP 2 GLY A 288 PRO A 289 0 -12.51 CISPEP 3 GLY A 306 PRO A 307 0 8.62 CISPEP 4 MET A 337 PRO A 338 0 5.19 SITE 1 AC1 18 ASP A 12 HIS A 19 ASP A 53 GLN A 95 SITE 2 AC1 18 ASP A 132 LYS A 133 TYR A 229 GLY A 231 SITE 3 AC1 18 LYS A 232 ASP A 234 ARG A 266 ASP A 287 SITE 4 AC1 18 HOH A 386 HOH A 388 MG A 402 MG A 403 SITE 5 AC1 18 MG A 404 HOH A 590 SITE 1 AC2 7 LYS A 232 ASP A 234 HOH A 386 HOH A 388 SITE 2 AC2 7 HOH A 389 13P A 401 MG A 403 SITE 1 AC3 7 ASP A 53 ASP A 54 ASP A 132 ASP A 234 SITE 2 AC3 7 HOH A 386 13P A 401 MG A 402 SITE 1 AC4 6 ASP A 12 HIS A 19 ASP A 53 GLN A 95 SITE 2 AC4 6 HOH A 387 13P A 401 SITE 1 AC5 3 HIS A 23 PRO A 24 HOH A 559 CRYST1 112.543 112.543 153.608 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008885 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008885 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006510 0.00000 MASTER 467 0 5 13 22 0 12 6 0 0 0 30 END