HEADER OXIDOREDUCTASE 14-FEB-11 3QPK TITLE PROBING OXYGEN CHANNELS IN MELANOCARPUS ALBOMYCES LACCASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LACCASE-1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: MATURE ENZYME (UNP RESIDUES 51-609); COMPND 5 SYNONYM: BENZENEDIOL:OXYGEN OXIDOREDUCTASE 1, DIPHENOL OXIDASE 1, COMPND 6 LIGNINOLYTIC PHENOLOXIDASE, URISHIOL OXIDASE 1; COMPND 7 EC: 1.10.3.2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MELANOCARPUS ALBOMYCES; SOURCE 3 ORGANISM_TAXID: 204285; SOURCE 4 GENE: LAC1; SOURCE 5 EXPRESSION_SYSTEM: HYPOCREA JECORINA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: TRICHODERMA REESEI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 51453 KEYWDS CU BINDING, XE BINDING, LACCASE, MULTICOPPER OXIDASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.P.KALLIO,J.ROUVINEN,N.HAKULINEN REVDAT 3 29-JUL-20 3QPK 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 08-JUN-11 3QPK 1 JRNL REVDAT 1 11-MAY-11 3QPK 0 JRNL AUTH J.P.KALLIO,J.ROUVINEN,K.KRUUS,N.HAKULINEN JRNL TITL PROBING THE DIOXYGEN ROUTE IN MELANOCARPUS ALBOMYCES LACCASE JRNL TITL 2 WITH PRESSURIZED XENON GAS. JRNL REF BIOCHEMISTRY V. 50 4396 2011 JRNL REFN ISSN 0006-2960 JRNL PMID 21524088 JRNL DOI 10.1021/BI200486B REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.5_2) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 91675 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4584 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.8370 - 4.0924 0.98 8864 467 0.2242 0.2470 REMARK 3 2 4.0924 - 3.2486 0.99 8775 462 0.1984 0.2327 REMARK 3 3 3.2486 - 2.8381 0.99 8723 459 0.2108 0.2646 REMARK 3 4 2.8381 - 2.5786 0.99 8687 457 0.2162 0.2731 REMARK 3 5 2.5786 - 2.3938 0.99 8680 457 0.2080 0.2667 REMARK 3 6 2.3938 - 2.2527 0.99 8673 456 0.2203 0.3038 REMARK 3 7 2.2527 - 2.1399 0.99 8666 457 0.2158 0.3015 REMARK 3 8 2.1399 - 2.0467 0.99 8695 457 0.2086 0.2926 REMARK 3 9 2.0467 - 1.9679 0.99 8700 458 0.2165 0.3085 REMARK 3 10 1.9679 - 1.9000 0.99 8628 454 0.2238 0.3056 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 60.52 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.39030 REMARK 3 B22 (A**2) : -4.50980 REMARK 3 B33 (A**2) : 9.90010 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.36890 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.022 9342 REMARK 3 ANGLE : 1.110 12843 REMARK 3 CHIRALITY : 0.072 1418 REMARK 3 PLANARITY : 0.005 1675 REMARK 3 DIHEDRAL : 16.839 3288 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3QPK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-FEB-11. REMARK 100 THE DEPOSITION ID IS D_1000063941. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : SI(311) MONOCHROMATOR REMARK 200 OPTICS : SI(311) MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS SCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 91675 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 43.825 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.19900 REMARK 200 R SYM FOR SHELL (I) : 0.19900 REMARK 200 FOR SHELL : 6.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2Q90 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13% W/V P2000 MME, 0.2 M AMMONIUM REMARK 280 SULFATE, 0.05 M MAGNESIUM SULFATE, 0.1 M SODIUM ACETATE, PH 4.2, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 87.07500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.10000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 87.07500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.10000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA B 204 O HOH B 1182 1.96 REMARK 500 O HOH B 1097 O HOH B 1117 1.99 REMARK 500 O HOH B 582 O HOH B 954 2.06 REMARK 500 NH2 ARG A 226 O HOH A 1137 2.09 REMARK 500 O VAL B 169 O HOH B 613 2.10 REMARK 500 O HOH B 787 O HOH B 959 2.12 REMARK 500 O PRO B 49 O HOH B 1182 2.13 REMARK 500 O GLU B 211 O HOH B 1137 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 13 -64.00 -124.15 REMARK 500 VAL A 111 -73.34 -123.25 REMARK 500 SER A 142 -129.75 47.13 REMARK 500 GLU A 235 -42.54 -147.17 REMARK 500 ASP A 253 -132.71 49.12 REMARK 500 ALA A 296 10.49 58.13 REMARK 500 HIS A 305 57.70 -147.93 REMARK 500 ASN A 381 91.82 -165.89 REMARK 500 ASN A 495 87.01 -155.15 REMARK 500 CYS B 4 19.40 -145.56 REMARK 500 ASP B 75 176.05 -58.94 REMARK 500 SER B 135 -163.89 -124.70 REMARK 500 SER B 142 -130.39 44.14 REMARK 500 GLU B 235 -45.21 -146.96 REMARK 500 ASN B 244 17.13 58.62 REMARK 500 ASP B 253 -136.08 45.45 REMARK 500 ALA B 296 15.35 58.10 REMARK 500 HIS B 305 65.84 -151.89 REMARK 500 PRO B 369 -174.35 -67.73 REMARK 500 ASN B 381 98.27 -160.65 REMARK 500 ARG B 476 -175.03 -171.87 REMARK 500 ASP B 556 -155.59 -135.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 604 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 93 NE2 REMARK 620 2 HIS A 434 NE2 174.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 603 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 95 ND1 REMARK 620 2 HIS A 138 NE2 136.1 REMARK 620 3 HIS A 504 NE2 106.7 112.5 REMARK 620 4 HOH A1100 O 113.9 89.6 83.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 602 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 140 NE2 REMARK 620 2 HIS A 436 NE2 116.1 REMARK 620 3 HIS A 502 NE2 117.7 111.6 REMARK 620 4 HOH A1100 O 99.3 106.1 103.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 601 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 431 ND1 REMARK 620 2 CYS A 503 SG 133.6 REMARK 620 3 HIS A 508 ND1 102.8 123.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 604 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 93 NE2 REMARK 620 2 HIS B 434 NE2 174.7 REMARK 620 3 CL B 610 CL 82.7 93.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 603 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 95 ND1 REMARK 620 2 HIS B 138 NE2 140.4 REMARK 620 3 HIS B 504 NE2 103.8 107.7 REMARK 620 4 HOH B 579 O 106.5 99.8 84.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 602 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 140 NE2 REMARK 620 2 HIS B 436 NE2 113.7 REMARK 620 3 HIS B 502 NE2 117.7 108.0 REMARK 620 4 HOH B 579 O 115.9 99.7 99.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 601 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 431 ND1 REMARK 620 2 CYS B 503 SG 132.8 REMARK 620 3 HIS B 508 ND1 102.1 125.0 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GW0 RELATED DB: PDB REMARK 900 NATIVE M.ALBOYCES LACCASE REMARK 900 RELATED ID: 2IH8 RELATED DB: PDB REMARK 900 LOW-DOSE CRYSTAL STRUCTURE OF A RECOMBINANT M. ALBOMYCES LACCASE REMARK 900 RELATED ID: 2IH9 RELATED DB: PDB REMARK 900 HIGH-DOSE CRYSTAL STRUCTURE OF A RECOMBINANT M. ALBOMYCES LACCASE REMARK 900 RELATED ID: 2Q9O RELATED DB: PDB REMARK 900 NEAR-ATOMIC RESOLUTION STRUCTURE OF A M. ALBOMYCES LACCASE REMARK 900 RELATED ID: 3DKH RELATED DB: PDB REMARK 900 L559A MUTANT OF M. ALBOMYCES LACCASE REMARK 900 RELATED ID: 3FU7 RELATED DB: PDB REMARK 900 M. ALBOMYCES LACCASE SOAKED WITH 2,6-DIMETHOXYPHENOL REMARK 900 RELATED ID: 3FU8 RELATED DB: PDB REMARK 900 M. ALBOMYCES LACCASE SOAKED WITH 2,6-DIMETHOXYPHENOL REMARK 900 RELATED ID: 3FU9 RELATED DB: PDB REMARK 900 M. ALBOMYCES LACCASE SOAKED WITH 2,6-DIMETHOXYPHENOL REMARK 900 RELATED ID: 3PPS RELATED DB: PDB REMARK 900 ASCOMYCETE LACCASE STRUCTURE FROM THEILVIA ARENARIA DBREF 3QPK A 1 559 UNP Q70KY3 LAC1_MELAO 51 609 DBREF 3QPK B 1 559 UNP Q70KY3 LAC1_MELAO 51 609 SEQRES 1 A 559 GLU PRO THR CYS ASN THR PRO SER ASN ARG ALA CYS TRP SEQRES 2 A 559 SER ASP GLY PHE ASP ILE ASN THR ASP TYR GLU VAL SER SEQRES 3 A 559 THR PRO ASP THR GLY VAL THR GLN SER TYR VAL PHE ASN SEQRES 4 A 559 LEU THR GLU VAL ASP ASN TRP MET GLY PRO ASP GLY VAL SEQRES 5 A 559 VAL LYS GLU LYS VAL MET LEU ILE ASN GLY ASN ILE MET SEQRES 6 A 559 GLY PRO ASN ILE VAL ALA ASN TRP GLY ASP THR VAL GLU SEQRES 7 A 559 VAL THR VAL ILE ASN ASN LEU VAL THR ASN GLY THR SER SEQRES 8 A 559 ILE HIS TRP HIS GLY ILE HIS GLN LYS ASP THR ASN LEU SEQRES 9 A 559 HIS ASP GLY ALA ASN GLY VAL THR GLU CYS PRO ILE PRO SEQRES 10 A 559 PRO LYS GLY GLY GLN ARG THR TYR ARG TRP ARG ALA ARG SEQRES 11 A 559 GLN TYR GLY THR SER TRP TYR HIS SER HIS PHE SER ALA SEQRES 12 A 559 GLN TYR GLY ASN GLY VAL VAL GLY THR ILE GLN ILE ASN SEQRES 13 A 559 GLY PRO ALA SER LEU PRO TYR ASP ILE ASP LEU GLY VAL SEQRES 14 A 559 PHE PRO ILE THR ASP TYR TYR TYR ARG ALA ALA ASP ASP SEQRES 15 A 559 LEU VAL HIS PHE THR GLN ASN ASN ALA PRO PRO PHE SER SEQRES 16 A 559 ASP ASN VAL LEU ILE ASN GLY THR ALA VAL ASN PRO ASN SEQRES 17 A 559 THR GLY GLU GLY GLN TYR ALA ASN VAL THR LEU THR PRO SEQRES 18 A 559 GLY LYS ARG HIS ARG LEU ARG ILE LEU ASN THR SER THR SEQRES 19 A 559 GLU ASN HIS PHE GLN VAL SER LEU VAL ASN HIS THR MET SEQRES 20 A 559 THR VAL ILE ALA ALA ASP MET VAL PRO VAL ASN ALA MET SEQRES 21 A 559 THR VAL ASP SER LEU PHE LEU ALA VAL GLY GLN ARG TYR SEQRES 22 A 559 ASP VAL VAL ILE ASP ALA SER ARG ALA PRO ASP ASN TYR SEQRES 23 A 559 TRP PHE ASN VAL THR PHE GLY GLY GLN ALA ALA CYS GLY SEQRES 24 A 559 GLY SER LEU ASN PRO HIS PRO ALA ALA ILE PHE HIS TYR SEQRES 25 A 559 ALA GLY ALA PRO GLY GLY LEU PRO THR ASP GLU GLY THR SEQRES 26 A 559 PRO PRO VAL ASP HIS GLN CYS LEU ASP THR LEU ASP VAL SEQRES 27 A 559 ARG PRO VAL VAL PRO ARG SER VAL PRO VAL ASN SER PHE SEQRES 28 A 559 VAL LYS ARG PRO ASP ASN THR LEU PRO VAL ALA LEU ASP SEQRES 29 A 559 LEU THR GLY THR PRO LEU PHE VAL TRP LYS VAL ASN GLY SEQRES 30 A 559 SER ASP ILE ASN VAL ASP TRP GLY LYS PRO ILE ILE ASP SEQRES 31 A 559 TYR ILE LEU THR GLY ASN THR SER TYR PRO VAL SER ASP SEQRES 32 A 559 ASN ILE VAL GLN VAL ASP ALA VAL ASP GLN TRP THR TYR SEQRES 33 A 559 TRP LEU ILE GLU ASN ASP PRO GLU GLY PRO PHE SER LEU SEQRES 34 A 559 PRO HIS PRO MET HIS LEU HIS GLY HIS ASP PHE LEU VAL SEQRES 35 A 559 LEU GLY ARG SER PRO ASP VAL PRO ALA ALA SER GLN GLN SEQRES 36 A 559 ARG PHE VAL PHE ASP PRO ALA VAL ASP LEU ALA ARG LEU SEQRES 37 A 559 ASN GLY ASP ASN PRO PRO ARG ARG ASP THR THR MET LEU SEQRES 38 A 559 PRO ALA GLY GLY TRP LEU LEU LEU ALA PHE ARG THR ASP SEQRES 39 A 559 ASN PRO GLY ALA TRP LEU PHE HIS CYS HIS ILE ALA TRP SEQRES 40 A 559 HIS VAL SER GLY GLY LEU SER VAL ASP PHE LEU GLU ARG SEQRES 41 A 559 PRO ALA ASP LEU ARG GLN ARG ILE SER GLN GLU ASP GLU SEQRES 42 A 559 ASP ASP PHE ASN ARG VAL CYS ASP GLU TRP ARG ALA TYR SEQRES 43 A 559 TRP PRO THR ASN PRO TYR PRO LYS ILE ASP SER GLY LEU SEQRES 1 B 559 GLU PRO THR CYS ASN THR PRO SER ASN ARG ALA CYS TRP SEQRES 2 B 559 SER ASP GLY PHE ASP ILE ASN THR ASP TYR GLU VAL SER SEQRES 3 B 559 THR PRO ASP THR GLY VAL THR GLN SER TYR VAL PHE ASN SEQRES 4 B 559 LEU THR GLU VAL ASP ASN TRP MET GLY PRO ASP GLY VAL SEQRES 5 B 559 VAL LYS GLU LYS VAL MET LEU ILE ASN GLY ASN ILE MET SEQRES 6 B 559 GLY PRO ASN ILE VAL ALA ASN TRP GLY ASP THR VAL GLU SEQRES 7 B 559 VAL THR VAL ILE ASN ASN LEU VAL THR ASN GLY THR SER SEQRES 8 B 559 ILE HIS TRP HIS GLY ILE HIS GLN LYS ASP THR ASN LEU SEQRES 9 B 559 HIS ASP GLY ALA ASN GLY VAL THR GLU CYS PRO ILE PRO SEQRES 10 B 559 PRO LYS GLY GLY GLN ARG THR TYR ARG TRP ARG ALA ARG SEQRES 11 B 559 GLN TYR GLY THR SER TRP TYR HIS SER HIS PHE SER ALA SEQRES 12 B 559 GLN TYR GLY ASN GLY VAL VAL GLY THR ILE GLN ILE ASN SEQRES 13 B 559 GLY PRO ALA SER LEU PRO TYR ASP ILE ASP LEU GLY VAL SEQRES 14 B 559 PHE PRO ILE THR ASP TYR TYR TYR ARG ALA ALA ASP ASP SEQRES 15 B 559 LEU VAL HIS PHE THR GLN ASN ASN ALA PRO PRO PHE SER SEQRES 16 B 559 ASP ASN VAL LEU ILE ASN GLY THR ALA VAL ASN PRO ASN SEQRES 17 B 559 THR GLY GLU GLY GLN TYR ALA ASN VAL THR LEU THR PRO SEQRES 18 B 559 GLY LYS ARG HIS ARG LEU ARG ILE LEU ASN THR SER THR SEQRES 19 B 559 GLU ASN HIS PHE GLN VAL SER LEU VAL ASN HIS THR MET SEQRES 20 B 559 THR VAL ILE ALA ALA ASP MET VAL PRO VAL ASN ALA MET SEQRES 21 B 559 THR VAL ASP SER LEU PHE LEU ALA VAL GLY GLN ARG TYR SEQRES 22 B 559 ASP VAL VAL ILE ASP ALA SER ARG ALA PRO ASP ASN TYR SEQRES 23 B 559 TRP PHE ASN VAL THR PHE GLY GLY GLN ALA ALA CYS GLY SEQRES 24 B 559 GLY SER LEU ASN PRO HIS PRO ALA ALA ILE PHE HIS TYR SEQRES 25 B 559 ALA GLY ALA PRO GLY GLY LEU PRO THR ASP GLU GLY THR SEQRES 26 B 559 PRO PRO VAL ASP HIS GLN CYS LEU ASP THR LEU ASP VAL SEQRES 27 B 559 ARG PRO VAL VAL PRO ARG SER VAL PRO VAL ASN SER PHE SEQRES 28 B 559 VAL LYS ARG PRO ASP ASN THR LEU PRO VAL ALA LEU ASP SEQRES 29 B 559 LEU THR GLY THR PRO LEU PHE VAL TRP LYS VAL ASN GLY SEQRES 30 B 559 SER ASP ILE ASN VAL ASP TRP GLY LYS PRO ILE ILE ASP SEQRES 31 B 559 TYR ILE LEU THR GLY ASN THR SER TYR PRO VAL SER ASP SEQRES 32 B 559 ASN ILE VAL GLN VAL ASP ALA VAL ASP GLN TRP THR TYR SEQRES 33 B 559 TRP LEU ILE GLU ASN ASP PRO GLU GLY PRO PHE SER LEU SEQRES 34 B 559 PRO HIS PRO MET HIS LEU HIS GLY HIS ASP PHE LEU VAL SEQRES 35 B 559 LEU GLY ARG SER PRO ASP VAL PRO ALA ALA SER GLN GLN SEQRES 36 B 559 ARG PHE VAL PHE ASP PRO ALA VAL ASP LEU ALA ARG LEU SEQRES 37 B 559 ASN GLY ASP ASN PRO PRO ARG ARG ASP THR THR MET LEU SEQRES 38 B 559 PRO ALA GLY GLY TRP LEU LEU LEU ALA PHE ARG THR ASP SEQRES 39 B 559 ASN PRO GLY ALA TRP LEU PHE HIS CYS HIS ILE ALA TRP SEQRES 40 B 559 HIS VAL SER GLY GLY LEU SER VAL ASP PHE LEU GLU ARG SEQRES 41 B 559 PRO ALA ASP LEU ARG GLN ARG ILE SER GLN GLU ASP GLU SEQRES 42 B 559 ASP ASP PHE ASN ARG VAL CYS ASP GLU TRP ARG ALA TYR SEQRES 43 B 559 TRP PRO THR ASN PRO TYR PRO LYS ILE ASP SER GLY LEU MODRES 3QPK ASN A 289 ASN GLYCOSYLATION SITE MODRES 3QPK ASN A 39 ASN GLYCOSYLATION SITE MODRES 3QPK ASN A 216 ASN GLYCOSYLATION SITE MODRES 3QPK ASN B 289 ASN GLYCOSYLATION SITE MODRES 3QPK ASN A 201 ASN GLYCOSYLATION SITE MODRES 3QPK ASN A 88 ASN GLYCOSYLATION SITE MODRES 3QPK ASN B 39 ASN GLYCOSYLATION SITE MODRES 3QPK ASN A 376 ASN GLYCOSYLATION SITE MODRES 3QPK ASN B 216 ASN GLYCOSYLATION SITE MODRES 3QPK ASN B 201 ASN GLYCOSYLATION SITE MODRES 3QPK ASN B 88 ASN GLYCOSYLATION SITE MODRES 3QPK ASN B 376 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET NAG F 1 14 HET NAG F 2 14 HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET NAG I 1 14 HET NAG I 2 14 HET CU A 601 1 HET CU A 602 1 HET CU A 603 1 HET CU A 604 1 HET CL A 610 1 HET NAG A 700 14 HET NAG A 750 14 HET XE A 574 1 HET XE A 575 1 HET XE A 576 1 HET SO4 A 577 5 HET SO4 A 578 5 HET CU B 601 1 HET CU B 602 1 HET CU B 603 1 HET CU B 604 1 HET CL B 610 1 HET NAG B 700 14 HET NAG B 720 14 HET NAG B 750 14 HET XE B 574 1 HET XE B 575 1 HET XE B 576 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CU COPPER (II) ION HETNAM CL CHLORIDE ION HETNAM XE XENON HETNAM SO4 SULFATE ION FORMUL 3 NAG 19(C8 H15 N O6) FORMUL 10 CU 8(CU 2+) FORMUL 14 CL 2(CL 1-) FORMUL 17 XE 6(XE) FORMUL 20 SO4 2(O4 S 2-) FORMUL 33 HOH *1224(H2 O) HELIX 1 1 THR A 102 ASP A 106 5 5 HELIX 2 2 ALA A 143 GLY A 148 5 6 HELIX 3 3 ALA A 179 GLN A 188 1 10 HELIX 4 4 GLY A 293 ALA A 297 5 5 HELIX 5 5 ARG A 354 ASP A 356 5 3 HELIX 6 6 PRO A 387 THR A 394 1 8 HELIX 7 7 PRO A 400 ASP A 403 5 4 HELIX 8 8 ASP A 460 LEU A 465 1 6 HELIX 9 9 ALA A 466 LEU A 468 5 3 HELIX 10 10 ILE A 505 GLY A 511 1 7 HELIX 11 11 ARG A 520 ILE A 528 1 9 HELIX 12 12 SER A 529 TRP A 547 1 19 HELIX 13 13 PRO A 548 ASN A 550 5 3 HELIX 14 14 THR B 102 ASP B 106 5 5 HELIX 15 15 ALA B 143 GLY B 148 5 6 HELIX 16 16 ALA B 179 GLN B 188 1 10 HELIX 17 17 GLY B 293 ALA B 297 5 5 HELIX 18 18 ARG B 354 ASP B 356 5 3 HELIX 19 19 PRO B 387 THR B 394 1 8 HELIX 20 20 PRO B 400 ASP B 403 5 4 HELIX 21 21 ASP B 460 LEU B 465 1 6 HELIX 22 22 ALA B 466 LEU B 468 5 3 HELIX 23 23 ILE B 505 GLY B 511 1 7 HELIX 24 24 ARG B 520 ILE B 528 1 9 HELIX 25 25 SER B 529 TRP B 547 1 19 HELIX 26 26 PRO B 548 ASN B 550 5 3 SHEET 1 A 2 CYS A 12 SER A 14 0 SHEET 2 A 2 PHE A 17 ASP A 18 -1 O PHE A 17 N SER A 14 SHEET 1 B 4 VAL A 53 ILE A 60 0 SHEET 2 B 4 THR A 33 MET A 47 -1 N THR A 41 O LEU A 59 SHEET 3 B 4 THR A 76 ASN A 84 1 O ILE A 82 N PHE A 38 SHEET 4 B 4 GLY A 121 ARG A 128 -1 O ARG A 123 N VAL A 81 SHEET 1 C 4 ILE A 69 ASN A 72 0 SHEET 2 C 4 VAL A 150 ASN A 156 1 O GLN A 154 N ILE A 69 SHEET 3 C 4 GLY A 133 SER A 139 -1 N SER A 135 O ILE A 153 SHEET 4 C 4 ILE A 92 HIS A 95 -1 N HIS A 93 O HIS A 138 SHEET 1 D 6 ASN A 197 ILE A 200 0 SHEET 2 D 6 ILE A 165 TYR A 175 -1 N THR A 173 O LEU A 199 SHEET 3 D 6 ARG A 224 ASN A 231 1 O LEU A 230 N ILE A 172 SHEET 4 D 6 ARG A 272 ASP A 278 -1 O VAL A 275 N LEU A 227 SHEET 5 D 6 MET A 247 ALA A 252 -1 N ILE A 250 O ASP A 274 SHEET 6 D 6 VAL A 255 VAL A 262 -1 O MET A 260 N VAL A 249 SHEET 1 E 5 ASN A 216 LEU A 219 0 SHEET 2 E 5 ALA A 307 TYR A 312 1 O HIS A 311 N VAL A 217 SHEET 3 E 5 ASN A 285 THR A 291 -1 N TYR A 286 O PHE A 310 SHEET 4 E 5 PHE A 238 LEU A 242 -1 N GLN A 239 O THR A 291 SHEET 5 E 5 LEU A 265 LEU A 267 -1 O LEU A 267 N PHE A 238 SHEET 1 F 6 VAL A 372 VAL A 375 0 SHEET 2 F 6 THR A 358 ASP A 364 -1 N ASP A 364 O VAL A 372 SHEET 3 F 6 TRP A 414 ASN A 421 1 O GLU A 420 N VAL A 361 SHEET 4 F 6 TRP A 486 ARG A 492 -1 O LEU A 489 N TRP A 417 SHEET 5 F 6 PHE A 440 ARG A 445 -1 N GLY A 444 O LEU A 488 SHEET 6 F 6 ARG A 475 ARG A 476 -1 O ARG A 476 N PHE A 440 SHEET 1 G 5 ILE A 405 VAL A 408 0 SHEET 2 G 5 SER A 514 GLU A 519 1 O ASP A 516 N VAL A 406 SHEET 3 G 5 GLY A 497 CYS A 503 -1 N PHE A 501 O VAL A 515 SHEET 4 G 5 HIS A 431 LEU A 435 -1 N HIS A 434 O HIS A 502 SHEET 5 G 5 THR A 478 LEU A 481 -1 O LEU A 481 N HIS A 431 SHEET 1 H 2 CYS B 12 SER B 14 0 SHEET 2 H 2 PHE B 17 ASP B 18 -1 O PHE B 17 N SER B 14 SHEET 1 I 4 VAL B 53 ILE B 60 0 SHEET 2 I 4 THR B 33 MET B 47 -1 N THR B 41 O LEU B 59 SHEET 3 I 4 THR B 76 ASN B 84 1 O ILE B 82 N PHE B 38 SHEET 4 I 4 GLY B 121 ARG B 128 -1 O TYR B 125 N VAL B 79 SHEET 1 J 4 ILE B 69 ASN B 72 0 SHEET 2 J 4 VAL B 150 ASN B 156 1 O ASN B 156 N ALA B 71 SHEET 3 J 4 GLY B 133 SER B 139 -1 N SER B 135 O ILE B 153 SHEET 4 J 4 ILE B 92 HIS B 95 -1 N HIS B 93 O HIS B 138 SHEET 1 K 6 ASN B 197 ILE B 200 0 SHEET 2 K 6 ILE B 165 TYR B 175 -1 N THR B 173 O LEU B 199 SHEET 3 K 6 ARG B 224 ASN B 231 1 O ARG B 226 N ILE B 165 SHEET 4 K 6 ARG B 272 ASP B 278 -1 O VAL B 275 N LEU B 227 SHEET 5 K 6 MET B 247 ALA B 252 -1 N ILE B 250 O ASP B 274 SHEET 6 K 6 VAL B 255 VAL B 262 -1 O VAL B 262 N MET B 247 SHEET 1 L 5 ASN B 216 LEU B 219 0 SHEET 2 L 5 ALA B 307 TYR B 312 1 O HIS B 311 N VAL B 217 SHEET 3 L 5 ASN B 285 THR B 291 -1 N TYR B 286 O PHE B 310 SHEET 4 L 5 PHE B 238 LEU B 242 -1 N GLN B 239 O THR B 291 SHEET 5 L 5 LEU B 265 LEU B 267 -1 O LEU B 267 N PHE B 238 SHEET 1 M 6 VAL B 372 VAL B 375 0 SHEET 2 M 6 THR B 358 ASP B 364 -1 N ASP B 364 O VAL B 372 SHEET 3 M 6 TRP B 414 ASN B 421 1 O LEU B 418 N LEU B 359 SHEET 4 M 6 TRP B 486 ARG B 492 -1 O LEU B 487 N ILE B 419 SHEET 5 M 6 PHE B 440 ARG B 445 -1 N GLY B 444 O LEU B 488 SHEET 6 M 6 ARG B 475 ARG B 476 -1 O ARG B 476 N PHE B 440 SHEET 1 N 5 ILE B 405 VAL B 408 0 SHEET 2 N 5 SER B 514 GLU B 519 1 O ASP B 516 N VAL B 406 SHEET 3 N 5 GLY B 497 CYS B 503 -1 N TRP B 499 O PHE B 517 SHEET 4 N 5 HIS B 431 LEU B 435 -1 N HIS B 434 O HIS B 502 SHEET 5 N 5 THR B 478 LEU B 481 -1 O LEU B 481 N HIS B 431 SSBOND 1 CYS A 4 CYS A 12 1555 1555 2.05 SSBOND 2 CYS A 114 CYS A 540 1555 1555 2.06 SSBOND 3 CYS A 298 CYS A 332 1555 1555 2.03 SSBOND 4 CYS B 4 CYS B 12 1555 1555 2.04 SSBOND 5 CYS B 114 CYS B 540 1555 1555 2.05 SSBOND 6 CYS B 298 CYS B 332 1555 1555 2.04 LINK ND2 ASN A 39 C1 NAG A 700 1555 1555 1.44 LINK ND2 ASN A 88 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN A 201 C1 NAG D 1 1555 1555 1.45 LINK ND2 ASN A 216 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN A 289 C1 NAG F 1 1555 1555 1.43 LINK ND2 ASN A 376 C1 NAG A 750 1555 1555 1.45 LINK ND2 ASN B 39 C1 NAG B 700 1555 1555 1.45 LINK ND2 ASN B 88 C1 NAG G 1 1555 1555 1.45 LINK ND2 ASN B 201 C1 NAG B 720 1555 1555 1.45 LINK ND2 ASN B 216 C1 NAG H 1 1555 1555 1.45 LINK ND2 ASN B 289 C1 NAG I 1 1555 1555 1.44 LINK ND2 ASN B 376 C1 NAG B 750 1555 1555 1.46 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.44 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.45 LINK NE2 HIS A 93 CU CU A 604 1555 1555 1.85 LINK ND1 HIS A 95 CU CU A 603 1555 1555 2.15 LINK NE2 HIS A 138 CU CU A 603 1555 1555 2.06 LINK NE2 HIS A 140 CU CU A 602 1555 1555 2.11 LINK ND1 HIS A 431 CU CU A 601 1555 1555 2.03 LINK NE2 HIS A 434 CU CU A 604 1555 1555 1.93 LINK NE2 HIS A 436 CU CU A 602 1555 1555 2.07 LINK NE2 HIS A 502 CU CU A 602 1555 1555 2.20 LINK SG CYS A 503 CU CU A 601 1555 1555 2.11 LINK NE2 HIS A 504 CU CU A 603 1555 1555 2.06 LINK ND1 HIS A 508 CU CU A 601 1555 1555 2.24 LINK CU CU A 602 O HOH A1100 1555 1555 2.38 LINK CU CU A 603 O HOH A1100 1555 1555 2.58 LINK NE2 HIS B 93 CU CU B 604 1555 1555 1.90 LINK ND1 HIS B 95 CU CU B 603 1555 1555 1.92 LINK NE2 HIS B 138 CU CU B 603 1555 1555 2.07 LINK NE2 HIS B 140 CU CU B 602 1555 1555 2.12 LINK ND1 HIS B 431 CU CU B 601 1555 1555 2.03 LINK NE2 HIS B 434 CU CU B 604 1555 1555 1.97 LINK NE2 HIS B 436 CU CU B 602 1555 1555 2.13 LINK NE2 HIS B 502 CU CU B 602 1555 1555 2.11 LINK SG CYS B 503 CU CU B 601 1555 1555 2.15 LINK NE2 HIS B 504 CU CU B 603 1555 1555 2.11 LINK ND1 HIS B 508 CU CU B 601 1555 1555 2.08 LINK O HOH B 579 CU CU B 602 1555 1555 2.24 LINK O HOH B 579 CU CU B 603 1555 1555 2.70 LINK CU CU B 604 CL CL B 610 1555 1555 2.56 CISPEP 1 THR A 368 PRO A 369 0 3.84 CISPEP 2 THR B 368 PRO B 369 0 3.68 CRYST1 174.150 60.200 114.440 90.00 99.79 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005742 0.000000 0.000991 0.00000 SCALE2 0.000000 0.016611 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008867 0.00000 MASTER 351 0 37 26 64 0 0 6 0 0 0 86 END