HEADER OXIDOREDUCTASE 18-JAN-11 3QDN TITLE PUTATIVE THIOREDOXIN PROTEIN FROM SALMONELLA TYPHIMURIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE THIOREDOXIN PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TYPHIMURIUM; SOURCE 4 ORGANISM_TAXID: 90371; SOURCE 5 STRAIN: LT2; SOURCE 6 GENE: STM0504, YBBN; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_COLLECTION: 469008; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS CSGID, STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF KEYWDS 2 INFECTIOUS DISEASES, YBBN, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,M.ZHOU,K.KWON,W.F.ANDERSON,A.JOACHIMIAK,CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 1 09-FEB-11 3QDN 0 JRNL AUTH J.OSIPIUK,M.ZHOU,K.KWON,W.F.ANDERSON,A.JOACHIMIAK JRNL TITL PUTATIVE THIOREDOXIN PROTEIN FROM SALMONELLA TYPHIMURIUM. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 30611 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.245 REMARK 3 R VALUE (WORKING SET) : 0.242 REMARK 3 FREE R VALUE : 0.302 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1625 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.09 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1357 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 57.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.3340 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.3830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4447 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 94 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.28000 REMARK 3 B22 (A**2) : -0.22000 REMARK 3 B33 (A**2) : -0.11000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.16000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.330 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.255 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.227 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.794 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.907 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4709 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6430 ; 1.578 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 617 ; 6.090 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 252 ;42.847 ;26.310 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 866 ;20.147 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;18.070 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 736 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3641 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2909 ; 0.819 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4690 ; 1.532 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1800 ; 2.311 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1711 ; 3.882 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -10 A 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 60.0572 2.5562 61.0833 REMARK 3 T TENSOR REMARK 3 T11: 0.0570 T22: 0.1041 REMARK 3 T33: 0.0754 T12: 0.0064 REMARK 3 T13: 0.0312 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.2035 L22: 0.3793 REMARK 3 L33: 0.2054 L12: -0.1787 REMARK 3 L13: 0.1974 L23: -0.1413 REMARK 3 S TENSOR REMARK 3 S11: 0.0152 S12: 0.0649 S13: -0.0280 REMARK 3 S21: -0.0194 S22: 0.0083 S23: -0.0355 REMARK 3 S31: 0.0088 S32: 0.0537 S33: -0.0235 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -10 B 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 89.0042 1.1471 61.0516 REMARK 3 T TENSOR REMARK 3 T11: 0.2230 T22: 0.2324 REMARK 3 T33: 0.2536 T12: -0.0220 REMARK 3 T13: -0.0067 T23: 0.0320 REMARK 3 L TENSOR REMARK 3 L11: 0.6329 L22: 0.0756 REMARK 3 L33: 0.5865 L12: 0.1763 REMARK 3 L13: 0.4950 L23: 0.2017 REMARK 3 S TENSOR REMARK 3 S11: -0.1171 S12: 0.2287 S13: 0.1389 REMARK 3 S21: -0.0325 S22: 0.0165 S23: 0.0322 REMARK 3 S31: -0.1225 S32: 0.1226 S33: 0.1005 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3QDN COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JAN-11. REMARK 100 THE RCSB ID CODE IS RCSB063512. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32295 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.120 REMARK 200 RESOLUTION RANGE LOW (A) : 35.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.12 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.63600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.770 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG-3000, 0.2 M CALCIUM ACETATE, REMARK 280 0.1 M TRIS BUFFER, PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.27350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 465 TYR B 52 REMARK 465 HIS B 53 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 GLN A 177 O ALA B 160 1455 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 5 34.27 72.43 REMARK 500 ARG A 163 57.47 -118.73 REMARK 500 ASP A 180 -153.34 -99.06 REMARK 500 ASP A 198 70.81 -100.48 REMARK 500 PRO A 213 40.89 -70.67 REMARK 500 GLN A 214 -11.66 -153.93 REMARK 500 ALA A 249 133.88 -30.79 REMARK 500 ASP B 64 70.37 -106.25 REMARK 500 VAL B 90 -69.80 -121.12 REMARK 500 GLU B 99 -19.34 -48.02 REMARK 500 ASN B 129 68.73 -117.00 REMARK 500 ASN B 162 51.26 35.87 REMARK 500 ARG B 163 52.12 -117.88 REMARK 500 ASP B 180 -156.34 -95.69 REMARK 500 ASP B 198 74.58 -108.78 REMARK 500 ALA B 249 136.37 -38.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 325 O REMARK 620 2 ALA A 281 O 89.8 REMARK 620 3 TYR A 284 OXT 103.8 80.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 309 O REMARK 620 2 GLN A 177 O 174.9 REMARK 620 3 ASP A 180 OD2 94.5 90.0 REMARK 620 4 ASP A 180 OD1 83.4 97.5 52.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP01793 RELATED DB: TARGETDB DBREF 3QDN A 1 284 UNP Q8ZR92 Q8ZR92_SALTY 1 284 DBREF 3QDN B 1 284 UNP Q8ZR92 Q8ZR92_SALTY 1 284 SEQADV 3QDN SER A -2 UNP Q8ZR92 EXPRESSION TAG SEQADV 3QDN ASN A -1 UNP Q8ZR92 EXPRESSION TAG SEQADV 3QDN ALA A 0 UNP Q8ZR92 EXPRESSION TAG SEQADV 3QDN SER B -2 UNP Q8ZR92 EXPRESSION TAG SEQADV 3QDN ASN B -1 UNP Q8ZR92 EXPRESSION TAG SEQADV 3QDN ALA B 0 UNP Q8ZR92 EXPRESSION TAG SEQRES 1 A 287 SER ASN ALA MSE SER VAL GLN ASN ILE VAL ASN ILE ASN SEQRES 2 A 287 GLU SER ASN LEU GLN GLN THR LEU GLU GLN SER MSE THR SEQRES 3 A 287 THR PRO VAL LEU PHE TYR PHE TRP SER GLU ARG SER GLN SEQRES 4 A 287 HIS CYS LEU GLN LEU THR PRO VAL LEU GLU SER LEU ALA SEQRES 5 A 287 ALA GLN TYR HIS GLY GLN PHE ILE LEU ALA LYS LEU ASP SEQRES 6 A 287 CYS ASP ALA GLU GLN MSE ILE ALA ALA GLN PHE GLY LEU SEQRES 7 A 287 ARG ALA ILE PRO THR VAL TYR LEU PHE GLN ASN GLY GLN SEQRES 8 A 287 PRO VAL ASP GLY PHE GLN GLY PRO GLN PRO GLU GLU ALA SEQRES 9 A 287 ILE ARG ALA LEU LEU ASP LYS VAL LEU PRO ARG GLU GLU SEQRES 10 A 287 GLU LEU LYS ALA GLN GLN ALA MSE GLN LEU MSE GLN GLU SEQRES 11 A 287 GLY ASN TYR ILE ASP ALA LEU PRO LEU LEU LYS ASP ALA SEQRES 12 A 287 TRP GLN LEU SER SER GLN ASN SER GLU ILE GLY LEU LEU SEQRES 13 A 287 LEU ALA GLU ALA GLN ILE ALA LEU ASN ARG SER GLU GLU SEQRES 14 A 287 ALA GLU ALA VAL LEU LYS THR ILE PRO LEU GLN ASP GLN SEQRES 15 A 287 ASP THR ARG TYR GLN GLY LEU VAL ALA GLN ILE GLU LEU SEQRES 16 A 287 LEU LYS GLN ALA ALA ASP THR PRO GLU ILE GLN GLN LEU SEQRES 17 A 287 GLN GLN GLN VAL ALA ASP ASN PRO GLN ASP ALA ALA LEU SEQRES 18 A 287 ALA THR GLN LEU ALA LEU GLN LEU HIS GLN VAL GLY ARG SEQRES 19 A 287 ASN GLU GLU ALA LEU GLU LEU LEU PHE SER HIS LEU ARG SEQRES 20 A 287 LYS ASP LEU THR ALA ALA GLU GLY GLN THR ARG LYS THR SEQRES 21 A 287 PHE GLN GLU ILE LEU ALA ALA LEU GLY THR GLY ASP ALA SEQRES 22 A 287 LEU ALA SER LYS TYR ARG ARG GLN LEU TYR ALA LEU LEU SEQRES 23 A 287 TYR SEQRES 1 B 287 SER ASN ALA MSE SER VAL GLN ASN ILE VAL ASN ILE ASN SEQRES 2 B 287 GLU SER ASN LEU GLN GLN THR LEU GLU GLN SER MSE THR SEQRES 3 B 287 THR PRO VAL LEU PHE TYR PHE TRP SER GLU ARG SER GLN SEQRES 4 B 287 HIS CYS LEU GLN LEU THR PRO VAL LEU GLU SER LEU ALA SEQRES 5 B 287 ALA GLN TYR HIS GLY GLN PHE ILE LEU ALA LYS LEU ASP SEQRES 6 B 287 CYS ASP ALA GLU GLN MSE ILE ALA ALA GLN PHE GLY LEU SEQRES 7 B 287 ARG ALA ILE PRO THR VAL TYR LEU PHE GLN ASN GLY GLN SEQRES 8 B 287 PRO VAL ASP GLY PHE GLN GLY PRO GLN PRO GLU GLU ALA SEQRES 9 B 287 ILE ARG ALA LEU LEU ASP LYS VAL LEU PRO ARG GLU GLU SEQRES 10 B 287 GLU LEU LYS ALA GLN GLN ALA MSE GLN LEU MSE GLN GLU SEQRES 11 B 287 GLY ASN TYR ILE ASP ALA LEU PRO LEU LEU LYS ASP ALA SEQRES 12 B 287 TRP GLN LEU SER SER GLN ASN SER GLU ILE GLY LEU LEU SEQRES 13 B 287 LEU ALA GLU ALA GLN ILE ALA LEU ASN ARG SER GLU GLU SEQRES 14 B 287 ALA GLU ALA VAL LEU LYS THR ILE PRO LEU GLN ASP GLN SEQRES 15 B 287 ASP THR ARG TYR GLN GLY LEU VAL ALA GLN ILE GLU LEU SEQRES 16 B 287 LEU LYS GLN ALA ALA ASP THR PRO GLU ILE GLN GLN LEU SEQRES 17 B 287 GLN GLN GLN VAL ALA ASP ASN PRO GLN ASP ALA ALA LEU SEQRES 18 B 287 ALA THR GLN LEU ALA LEU GLN LEU HIS GLN VAL GLY ARG SEQRES 19 B 287 ASN GLU GLU ALA LEU GLU LEU LEU PHE SER HIS LEU ARG SEQRES 20 B 287 LYS ASP LEU THR ALA ALA GLU GLY GLN THR ARG LYS THR SEQRES 21 B 287 PHE GLN GLU ILE LEU ALA ALA LEU GLY THR GLY ASP ALA SEQRES 22 B 287 LEU ALA SER LYS TYR ARG ARG GLN LEU TYR ALA LEU LEU SEQRES 23 B 287 TYR MODRES 3QDN MSE A 1 MET SELENOMETHIONINE MODRES 3QDN MSE A 22 MET SELENOMETHIONINE MODRES 3QDN MSE A 68 MET SELENOMETHIONINE MODRES 3QDN MSE A 122 MET SELENOMETHIONINE MODRES 3QDN MSE A 125 MET SELENOMETHIONINE MODRES 3QDN MSE B 22 MET SELENOMETHIONINE MODRES 3QDN MSE B 68 MET SELENOMETHIONINE MODRES 3QDN MSE B 122 MET SELENOMETHIONINE MODRES 3QDN MSE B 125 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 22 13 HET MSE A 68 13 HET MSE A 122 8 HET MSE A 125 8 HET MSE B 22 8 HET MSE B 68 8 HET MSE B 122 8 HET MSE B 125 8 HET CA A 501 1 HET CA A 502 1 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 3 CA 2(CA 2+) FORMUL 5 HOH *94(H2 O) HELIX 1 1 ASN A 13 SER A 21 1 9 HELIX 2 2 SER A 35 TYR A 52 1 18 HELIX 3 3 GLU A 66 GLN A 72 1 7 HELIX 4 4 PRO A 98 LYS A 108 1 11 HELIX 5 5 ARG A 112 GLU A 127 1 16 HELIX 6 6 ASN A 129 SER A 144 1 16 HELIX 7 7 ASN A 147 LEU A 161 1 15 HELIX 8 8 ARG A 163 LYS A 172 1 10 HELIX 9 9 THR A 173 ILE A 174 5 2 HELIX 10 10 PRO A 175 GLN A 179 5 5 HELIX 11 11 ASP A 180 ALA A 197 1 18 HELIX 12 12 THR A 199 ASP A 211 1 13 HELIX 13 13 ASP A 215 VAL A 229 1 15 HELIX 14 14 ARG A 231 ARG A 244 1 14 HELIX 15 15 GLY A 252 GLY A 266 1 15 HELIX 16 16 ASP A 269 TYR A 284 1 16 HELIX 17 17 ASN B 13 SER B 21 1 9 HELIX 18 18 SER B 35 GLN B 51 1 17 HELIX 19 19 GLU B 66 ALA B 71 1 6 HELIX 20 20 GLN B 72 GLY B 74 5 3 HELIX 21 21 PRO B 98 LEU B 106 1 9 HELIX 22 22 ARG B 112 GLU B 127 1 16 HELIX 23 23 ASN B 129 SER B 144 1 16 HELIX 24 24 ASN B 147 LEU B 161 1 15 HELIX 25 25 ARG B 163 THR B 173 1 11 HELIX 26 26 ILE B 174 GLN B 179 5 6 HELIX 27 27 ASP B 180 ALA B 197 1 18 HELIX 28 28 THR B 199 ASN B 212 1 14 HELIX 29 29 ASP B 215 VAL B 229 1 15 HELIX 30 30 ARG B 231 ASP B 246 1 16 HELIX 31 31 THR B 248 GLU B 251 5 4 HELIX 32 32 GLY B 252 LEU B 265 1 14 HELIX 33 33 ASP B 269 TYR B 284 1 16 SHEET 1 A 5 ILE A 6 ASN A 8 0 SHEET 2 A 5 ILE A 57 ASP A 62 1 O LEU A 58 N VAL A 7 SHEET 3 A 5 VAL A 26 TRP A 31 1 N TYR A 29 O LEU A 61 SHEET 4 A 5 THR A 80 GLN A 85 -1 O PHE A 84 N VAL A 26 SHEET 5 A 5 GLN A 88 GLN A 94 -1 O ASP A 91 N LEU A 83 SHEET 1 B 5 ILE B 6 ASN B 8 0 SHEET 2 B 5 ILE B 57 ASP B 62 1 O LEU B 58 N VAL B 7 SHEET 3 B 5 VAL B 26 TRP B 31 1 N LEU B 27 O ALA B 59 SHEET 4 B 5 THR B 80 GLN B 85 -1 O THR B 80 N PHE B 30 SHEET 5 B 5 GLN B 88 ASP B 91 -1 O GLN B 88 N GLN B 85 LINK C ALA A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N SER A 2 1555 1555 1.33 LINK C SER A 21 N MSE A 22 1555 1555 1.33 LINK C MSE A 22 N THR A 23 1555 1555 1.33 LINK C GLN A 67 N MSE A 68 1555 1555 1.33 LINK C MSE A 68 N ILE A 69 1555 1555 1.33 LINK C ALA A 121 N MSE A 122 1555 1555 1.33 LINK C MSE A 122 N GLN A 123 1555 1555 1.33 LINK C LEU A 124 N MSE A 125 1555 1555 1.34 LINK C MSE A 125 N GLN A 126 1555 1555 1.32 LINK C SER B 21 N MSE B 22 1555 1555 1.35 LINK C MSE B 22 N THR B 23 1555 1555 1.34 LINK C GLN B 67 N MSE B 68 1555 1555 1.34 LINK C MSE B 68 N ILE B 69 1555 1555 1.33 LINK C ALA B 121 N MSE B 122 1555 1555 1.34 LINK C MSE B 122 N GLN B 123 1555 1555 1.34 LINK C LEU B 124 N MSE B 125 1555 1555 1.34 LINK C MSE B 125 N GLN B 126 1555 1555 1.33 LINK CA CA A 501 O HOH A 325 1555 1555 1.97 LINK CA CA A 502 O HOH A 309 1555 1555 2.07 LINK O GLN A 177 CA CA A 502 1555 1555 2.15 LINK O ALA A 281 CA CA A 501 1555 1555 2.18 LINK OXT TYR A 284 CA CA A 501 1555 1555 2.29 LINK OD2 ASP A 180 CA CA A 502 1555 1555 2.47 LINK OD1 ASP A 180 CA CA A 502 1555 1555 2.52 CISPEP 1 ILE A 78 PRO A 79 0 -1.40 CISPEP 2 ASP B 64 ALA B 65 0 20.29 CISPEP 3 ILE B 78 PRO B 79 0 5.28 SITE 1 AC1 3 ALA A 281 TYR A 284 HOH A 325 SITE 1 AC2 3 GLN A 177 ASP A 180 HOH A 309 CRYST1 58.234 62.547 79.522 90.00 98.66 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017172 0.000000 0.002616 0.00000 SCALE2 0.000000 0.015988 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012720 0.00000 MASTER 369 0 11 33 10 0 2 6 0 0 0 46 END