HEADER VIRAL PROTEIN 03-JAN-11 3Q6R TITLE CRYSTAL STRUCTURE OF P DOMAIN FROM NORWALK VIRUS STRAIN VIETNAM 026 IN TITLE 2 COMPLEX WITH DISORDERED HBGA TYPE LEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 225-538; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NORWALK VIRUS; SOURCE 3 ORGANISM_TAXID: 11983; SOURCE 4 STRAIN: VIETNAM 026; SOURCE 5 GENE: CAPSID PROTEIN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: MBP-HTSHP KEYWDS NOROVIRUS, P-DOMAIN, CAPSID, RECEPTOR, HISTO BLOOD GROUP ANTIGEN KEYWDS 2 (HBGA), VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.S.HANSMAN,C.BIERTUMPFEL,J.S.MCLELLAN,L.CHEN,I.GEORGIEV,K.KATAYAMA, AUTHOR 2 P.D.KWONG REVDAT 2 02-NOV-11 3Q6R 1 JRNL VERSN REVDAT 1 11-MAY-11 3Q6R 0 JRNL AUTH G.S.HANSMAN,C.BIERTUMPFEL,I.GEORGIEV,J.S.MCLELLAN,L.CHEN, JRNL AUTH 2 T.ZHOU,K.KATAYAMA,P.D.KWONG JRNL TITL CRYSTAL STRUCTURES OF GII.10 AND GII.12 NOROVIRUS PROTRUDING JRNL TITL 2 DOMAINS IN COMPLEX WITH HISTO-BLOOD GROUP ANTIGENS REVEAL JRNL TITL 3 DETAILS FOR A POTENTIAL SITE OF VULNERABILITY. JRNL REF J.VIROL. V. 85 6687 2011 JRNL REFN ISSN 0022-538X JRNL PMID 21525337 JRNL DOI 10.1128/JVI.00246-11 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 136413 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.178 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 6924 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.6792 - 4.3441 0.99 4431 214 0.1596 0.1685 REMARK 3 2 4.3441 - 3.4504 0.99 4353 250 0.1446 0.1433 REMARK 3 3 3.4504 - 3.0149 0.99 4348 211 0.1553 0.1634 REMARK 3 4 3.0149 - 2.7396 0.99 4348 219 0.1623 0.1729 REMARK 3 5 2.7396 - 2.5434 0.99 4317 215 0.1590 0.1820 REMARK 3 6 2.5434 - 2.3935 0.99 4296 219 0.1529 0.1670 REMARK 3 7 2.3935 - 2.2737 0.99 4279 270 0.1513 0.1645 REMARK 3 8 2.2737 - 2.1748 0.99 4276 233 0.1568 0.1614 REMARK 3 9 2.1748 - 2.0911 1.00 4356 220 0.1537 0.1636 REMARK 3 10 2.0911 - 2.0190 0.99 4336 212 0.1490 0.1531 REMARK 3 11 2.0190 - 1.9558 1.00 4316 221 0.1521 0.1728 REMARK 3 12 1.9558 - 1.9000 1.00 4307 248 0.1548 0.1735 REMARK 3 13 1.9000 - 1.8500 1.00 4304 230 0.1554 0.1540 REMARK 3 14 1.8500 - 1.8048 1.00 4297 233 0.1513 0.1678 REMARK 3 15 1.8048 - 1.7638 1.00 4311 236 0.1532 0.1931 REMARK 3 16 1.7638 - 1.7263 1.00 4344 213 0.1602 0.1702 REMARK 3 17 1.7263 - 1.6918 1.00 4358 208 0.1705 0.1817 REMARK 3 18 1.6918 - 1.6598 1.00 4289 246 0.1717 0.2029 REMARK 3 19 1.6598 - 1.6302 1.00 4296 238 0.1773 0.1906 REMARK 3 20 1.6302 - 1.6026 1.00 4305 239 0.1856 0.2262 REMARK 3 21 1.6026 - 1.5767 1.00 4304 231 0.1873 0.2123 REMARK 3 22 1.5767 - 1.5525 1.00 4294 215 0.1938 0.2192 REMARK 3 23 1.5525 - 1.5296 1.00 4338 226 0.2064 0.2220 REMARK 3 24 1.5296 - 1.5081 1.00 4304 234 0.2088 0.2170 REMARK 3 25 1.5081 - 1.4877 1.00 4272 253 0.2155 0.2435 REMARK 3 26 1.4877 - 1.4684 1.00 4357 239 0.2294 0.2578 REMARK 3 27 1.4684 - 1.4500 1.00 4246 235 0.2345 0.2744 REMARK 3 28 1.4500 - 1.4326 1.00 4340 224 0.2464 0.2683 REMARK 3 29 1.4326 - 1.4159 1.00 4293 248 0.2595 0.2962 REMARK 3 30 1.4159 - 1.4000 1.00 4274 244 0.2646 0.2781 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 44.61 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.62540 REMARK 3 B22 (A**2) : -1.21090 REMARK 3 B33 (A**2) : 2.83620 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : -2.56030 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 5047 REMARK 3 ANGLE : 1.062 6867 REMARK 3 CHIRALITY : 0.074 759 REMARK 3 PLANARITY : 0.005 906 REMARK 3 DIHEDRAL : 11.765 1807 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (chain A) REMARK 3 ORIGIN FOR THE GROUP (A): 8.0050 6.7385 8.7806 REMARK 3 T TENSOR REMARK 3 T11: 0.0596 T22: 0.0499 REMARK 3 T33: 0.0290 T12: -0.0107 REMARK 3 T13: 0.0005 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 0.6277 L22: 0.6408 REMARK 3 L33: 0.8046 L12: 0.0629 REMARK 3 L13: 0.0071 L23: -0.1291 REMARK 3 S TENSOR REMARK 3 S11: -0.0214 S12: 0.0835 S13: 0.0297 REMARK 3 S21: -0.0614 S22: 0.0350 S23: 0.0169 REMARK 3 S31: -0.0807 S32: 0.0185 S33: -0.0177 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (chain B) REMARK 3 ORIGIN FOR THE GROUP (A): 20.8500 -5.6370 25.0197 REMARK 3 T TENSOR REMARK 3 T11: 0.0610 T22: 0.0620 REMARK 3 T33: 0.0872 T12: 0.0052 REMARK 3 T13: -0.0171 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 0.7336 L22: 0.7601 REMARK 3 L33: 0.5494 L12: -0.0271 REMARK 3 L13: 0.1422 L23: 0.1008 REMARK 3 S TENSOR REMARK 3 S11: 0.0225 S12: -0.0294 S13: -0.1192 REMARK 3 S21: 0.0642 S22: 0.0390 S23: -0.1391 REMARK 3 S31: 0.0454 S32: 0.0768 S33: -0.0551 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3Q6R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JAN-11. REMARK 100 THE RCSB ID CODE IS RCSB063264. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-AUG-10 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 136423 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 26.674 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.730 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04400 REMARK 200 FOR THE DATA SET : 22.1700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.67 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.71000 REMARK 200 FOR SHELL : 2.390 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER (2.1.4) REMARK 200 STARTING MODEL: PDB ENTRY 3ONU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M IMIDAZOLE, 8.25% (W/V) PEG 8000, REMARK 280 1% (V/V) MPD, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K, PH REMARK 280 6.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.51200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ASYMMETRIC UNIT IS ALSO BIOLOGICAL UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 220 REMARK 465 PRO A 221 REMARK 465 GLY A 222 REMARK 465 SER A 223 REMARK 465 GLY B 220 REMARK 465 PRO B 221 REMARK 465 GLY B 222 REMARK 465 SER B 223 REMARK 465 HIS B 298 REMARK 465 ARG B 299 REMARK 465 ASN B 344 REMARK 465 THR B 345 REMARK 465 VAL B 346 REMARK 465 PRO B 347 REMARK 465 GLY B 348 REMARK 465 GLU B 349 REMARK 465 GLY B 350 REMARK 465 ASN B 351 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 252 75.09 -153.19 REMARK 500 GLN A 260 48.32 -149.17 REMARK 500 THR A 291 -64.20 -96.13 REMARK 500 GLN A 384 -22.77 -146.81 REMARK 500 VAL A 529 -150.36 -121.27 REMARK 500 ASN B 252 77.10 -155.61 REMARK 500 GLN B 260 49.45 -146.44 REMARK 500 GLN B 384 -27.66 -145.73 REMARK 500 VAL B 529 -153.42 -126.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 10 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 12 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 13 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 14 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 15 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 16 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 17 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 18 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 19 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD B 20 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD A 21 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD B 22 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD A 23 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ONY RELATED DB: PDB REMARK 900 RELATED ID: 3ONU RELATED DB: PDB REMARK 900 RELATED ID: 3PA1 RELATED DB: PDB REMARK 900 RELATED ID: 3PA2 RELATED DB: PDB REMARK 900 RELATED ID: 3R6J RELATED DB: PDB REMARK 900 RELATED ID: 3R6K RELATED DB: PDB REMARK 900 RELATED ID: 3Q38 RELATED DB: PDB REMARK 900 RELATED ID: 3Q39 RELATED DB: PDB REMARK 900 RELATED ID: 3Q3A RELATED DB: PDB REMARK 900 RELATED ID: 3Q6Q RELATED DB: PDB DBREF 3Q6R A 224 538 UNP Q5F4T5 Q5F4T5_9CALI 224 538 DBREF 3Q6R B 224 538 UNP Q5F4T5 Q5F4T5_9CALI 224 538 SEQADV 3Q6R GLY A 220 UNP Q5F4T5 EXPRESSION TAG SEQADV 3Q6R PRO A 221 UNP Q5F4T5 EXPRESSION TAG SEQADV 3Q6R GLY A 222 UNP Q5F4T5 EXPRESSION TAG SEQADV 3Q6R SER A 223 UNP Q5F4T5 EXPRESSION TAG SEQADV 3Q6R GLY B 220 UNP Q5F4T5 EXPRESSION TAG SEQADV 3Q6R PRO B 221 UNP Q5F4T5 EXPRESSION TAG SEQADV 3Q6R GLY B 222 UNP Q5F4T5 EXPRESSION TAG SEQADV 3Q6R SER B 223 UNP Q5F4T5 EXPRESSION TAG SEQRES 1 A 319 GLY PRO GLY SER SER LYS PRO PHE THR LEU PRO ILE LEU SEQRES 2 A 319 THR LEU GLY GLU LEU THR ASN SER ARG PHE PRO LEU PRO SEQRES 3 A 319 ILE ASP VAL LEU TYR THR ASN PRO ASN GLU SER ALA ILE SEQRES 4 A 319 VAL GLN CYS GLN ASN GLY ARG CYS THR LEU ASP GLY GLU SEQRES 5 A 319 LEU GLN GLY THR THR GLN LEU LEU PRO THR GLY ILE CYS SEQRES 6 A 319 ALA PHE ARG GLY LYS VAL THR GLN GLN VAL GLN ASP GLU SEQRES 7 A 319 HIS ARG GLY THR HIS TRP ASN MET THR VAL THR ASN LEU SEQRES 8 A 319 ASN GLY THR PRO PHE ASP PRO THR GLU ASP VAL PRO ALA SEQRES 9 A 319 PRO LEU GLY THR PRO ASP PHE SER GLY GLN ILE TYR GLY SEQRES 10 A 319 VAL ILE SER GLN ARG ASN THR ASN THR VAL PRO GLY GLU SEQRES 11 A 319 GLY ASN LEU PRO ALA ASN ARG ALA HIS GLU ALA VAL ILE SEQRES 12 A 319 ALA THR TYR SER PRO LYS PHE THR PRO LYS LEU GLY ASN SEQRES 13 A 319 ILE GLN PHE SER THR TRP GLU THR GLN ASP VAL SER SER SEQRES 14 A 319 GLY GLN PRO THR LYS PHE THR PRO VAL GLY LEU ALA SER SEQRES 15 A 319 VAL ASP ALA ASN SER HIS PHE ASP GLN TRP THR LEU PRO SEQRES 16 A 319 SER TYR SER GLY ALA LEU THR LEU ASN MET ASN LEU ALA SEQRES 17 A 319 PRO SER VAL ALA PRO VAL PHE PRO GLY GLU CYS LEU LEU SEQRES 18 A 319 PHE PHE ARG SER PHE ILE PRO LEU LYS GLY GLY TYR GLY SEQRES 19 A 319 ASN PRO ALA ILE ASP CYS LEU MET PRO GLN GLU TRP VAL SEQRES 20 A 319 GLN HIS LEU TYR GLN GLU SER ALA PRO SER LEU SER ASP SEQRES 21 A 319 VAL ALA LEU VAL ARG TYR VAL ASN PRO GLU THR GLY ARG SEQRES 22 A 319 THR LEU PHE GLU ALA LYS LEU HIS ARG ASN GLY PHE LEU SEQRES 23 A 319 THR VAL ALA ARG ASN SER ALA GLY PRO VAL VAL ALA PRO SEQRES 24 A 319 THR ASN GLY TYR PHE ARG PHE ASP SER TRP VAL ASN GLN SEQRES 25 A 319 PHE TYR THR LEU ALA PRO MET SEQRES 1 B 319 GLY PRO GLY SER SER LYS PRO PHE THR LEU PRO ILE LEU SEQRES 2 B 319 THR LEU GLY GLU LEU THR ASN SER ARG PHE PRO LEU PRO SEQRES 3 B 319 ILE ASP VAL LEU TYR THR ASN PRO ASN GLU SER ALA ILE SEQRES 4 B 319 VAL GLN CYS GLN ASN GLY ARG CYS THR LEU ASP GLY GLU SEQRES 5 B 319 LEU GLN GLY THR THR GLN LEU LEU PRO THR GLY ILE CYS SEQRES 6 B 319 ALA PHE ARG GLY LYS VAL THR GLN GLN VAL GLN ASP GLU SEQRES 7 B 319 HIS ARG GLY THR HIS TRP ASN MET THR VAL THR ASN LEU SEQRES 8 B 319 ASN GLY THR PRO PHE ASP PRO THR GLU ASP VAL PRO ALA SEQRES 9 B 319 PRO LEU GLY THR PRO ASP PHE SER GLY GLN ILE TYR GLY SEQRES 10 B 319 VAL ILE SER GLN ARG ASN THR ASN THR VAL PRO GLY GLU SEQRES 11 B 319 GLY ASN LEU PRO ALA ASN ARG ALA HIS GLU ALA VAL ILE SEQRES 12 B 319 ALA THR TYR SER PRO LYS PHE THR PRO LYS LEU GLY ASN SEQRES 13 B 319 ILE GLN PHE SER THR TRP GLU THR GLN ASP VAL SER SER SEQRES 14 B 319 GLY GLN PRO THR LYS PHE THR PRO VAL GLY LEU ALA SER SEQRES 15 B 319 VAL ASP ALA ASN SER HIS PHE ASP GLN TRP THR LEU PRO SEQRES 16 B 319 SER TYR SER GLY ALA LEU THR LEU ASN MET ASN LEU ALA SEQRES 17 B 319 PRO SER VAL ALA PRO VAL PHE PRO GLY GLU CYS LEU LEU SEQRES 18 B 319 PHE PHE ARG SER PHE ILE PRO LEU LYS GLY GLY TYR GLY SEQRES 19 B 319 ASN PRO ALA ILE ASP CYS LEU MET PRO GLN GLU TRP VAL SEQRES 20 B 319 GLN HIS LEU TYR GLN GLU SER ALA PRO SER LEU SER ASP SEQRES 21 B 319 VAL ALA LEU VAL ARG TYR VAL ASN PRO GLU THR GLY ARG SEQRES 22 B 319 THR LEU PHE GLU ALA LYS LEU HIS ARG ASN GLY PHE LEU SEQRES 23 B 319 THR VAL ALA ARG ASN SER ALA GLY PRO VAL VAL ALA PRO SEQRES 24 B 319 THR ASN GLY TYR PHE ARG PHE ASP SER TRP VAL ASN GLN SEQRES 25 B 319 PHE TYR THR LEU ALA PRO MET HET EDO A 2 4 HET EDO A 5 4 HET EDO A 7 4 HET EDO A 8 4 HET EDO A 9 4 HET EDO A 10 4 HET EDO A 12 4 HET EDO A 13 4 HET EDO A 14 8 HET EDO A 16 4 HET EDO A 17 4 HET EDO A 18 4 HET EDO A 19 4 HET IMD A 21 5 HET IMD A 23 5 HET EDO B 1 4 HET EDO B 3 4 HET EDO B 4 4 HET EDO B 6 4 HET EDO B 11 4 HET EDO B 15 4 HET IMD B 20 5 HET IMD B 22 5 HETNAM EDO 1,2-ETHANEDIOL HETNAM IMD IMIDAZOLE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 19(C2 H6 O2) FORMUL 16 IMD 4(C3 H5 N2 1+) FORMUL 26 HOH *967(H2 O) HELIX 1 1 THR A 233 LEU A 237 5 5 HELIX 2 2 LEU A 279 ILE A 283 5 5 HELIX 3 3 VAL A 346 GLY A 350 5 5 HELIX 4 4 THR A 370 LEU A 373 5 4 HELIX 5 5 ASP A 403 HIS A 407 5 5 HELIX 6 6 PRO A 462 SER A 473 1 12 HELIX 7 7 THR B 233 LEU B 237 5 5 HELIX 8 8 LEU B 279 ILE B 283 5 5 HELIX 9 9 THR B 370 LEU B 373 5 4 HELIX 10 10 ASP B 403 HIS B 407 5 5 HELIX 11 11 PRO B 462 SER B 473 1 12 SHEET 1 A 4 ALA A 456 CYS A 459 0 SHEET 2 A 4 GLU A 437 PHE A 445 -1 N SER A 444 O ILE A 457 SHEET 3 A 4 VAL A 248 THR A 251 -1 N VAL A 248 O ARG A 443 SHEET 4 A 4 GLY A 513 VAL A 515 -1 O GLY A 513 N THR A 251 SHEET 1 B 6 ALA A 456 CYS A 459 0 SHEET 2 B 6 GLU A 437 PHE A 445 -1 N SER A 444 O ILE A 457 SHEET 3 B 6 PHE A 504 ALA A 508 -1 O VAL A 507 N CYS A 438 SHEET 4 B 6 THR A 493 HIS A 500 -1 N HIS A 500 O PHE A 504 SHEET 5 B 6 VAL A 480 VAL A 486 -1 N ALA A 481 O LEU A 499 SHEET 6 B 6 TYR A 522 VAL A 529 -1 O SER A 527 N LEU A 482 SHEET 1 C 8 GLY B 450 TYR B 452 0 SHEET 2 C 8 ALA A 354 ALA A 363 -1 N ASN A 355 O GLY B 451 SHEET 3 C 8 ASN A 375 THR A 380 -1 O SER A 379 N VAL A 361 SHEET 4 C 8 THR A 301 VAL A 307 -1 N MET A 305 O ILE A 376 SHEET 5 C 8 PHE A 286 VAL A 294 -1 N THR A 291 O ASN A 304 SHEET 6 C 8 PRO A 391 LEU A 399 -1 O THR A 392 N GLY A 288 SHEET 7 C 8 GLN A 333 ARG A 341 -1 N TYR A 335 O VAL A 397 SHEET 8 C 8 ALA A 354 ALA A 363 -1 O ILE A 362 N ILE A 334 SHEET 1 D 8 GLY A 450 TYR A 452 0 SHEET 2 D 8 ALA B 354 ALA B 363 -1 O ASN B 355 N GLY A 451 SHEET 3 D 8 ASN B 375 THR B 380 -1 O SER B 379 N VAL B 361 SHEET 4 D 8 THR B 301 VAL B 307 -1 N MET B 305 O ILE B 376 SHEET 5 D 8 PHE B 286 GLN B 295 -1 N THR B 291 O ASN B 304 SHEET 6 D 8 PRO B 391 LEU B 399 -1 O PHE B 394 N PHE B 286 SHEET 7 D 8 GLN B 333 ARG B 341 -1 N VAL B 337 O THR B 395 SHEET 8 D 8 ALA B 354 ALA B 363 -1 O ILE B 362 N ILE B 334 SHEET 1 E 4 ALA B 456 CYS B 459 0 SHEET 2 E 4 GLU B 437 PHE B 445 -1 N SER B 444 O ILE B 457 SHEET 3 E 4 VAL B 248 THR B 251 -1 N VAL B 248 O ARG B 443 SHEET 4 E 4 GLY B 513 PRO B 514 -1 O GLY B 513 N THR B 251 SHEET 1 F 6 ALA B 456 CYS B 459 0 SHEET 2 F 6 GLU B 437 PHE B 445 -1 N SER B 444 O ILE B 457 SHEET 3 F 6 PHE B 504 ALA B 508 -1 O VAL B 507 N CYS B 438 SHEET 4 F 6 THR B 493 HIS B 500 -1 N HIS B 500 O PHE B 504 SHEET 5 F 6 VAL B 480 VAL B 486 -1 N ALA B 481 O LEU B 499 SHEET 6 F 6 TYR B 522 VAL B 529 -1 O SER B 527 N LEU B 482 SITE 1 AC1 5 HOH B 42 HOH B 137 LEU B 279 THR B 281 SITE 2 AC1 5 ARG B 287 SITE 1 AC2 7 HOH A 35 HOH A 92 PRO A 245 ILE A 246 SITE 2 AC2 7 HOH A 600 HOH B 137 ASN B 311 SITE 1 AC3 7 HOH B 19 HOH B 37 HOH B 166 ASN B 309 SITE 2 AC3 7 LEU B 310 ASN B 311 LEU B 325 SITE 1 AC4 5 HOH B 101 HOH B 115 GLU B 464 HIS B 468 SITE 2 AC4 5 HOH B 597 SITE 1 AC5 6 HOH A 134 PRO A 230 GLU A 464 HIS A 468 SITE 2 AC5 6 HOH A 618 HOH B 101 SITE 1 AC6 6 HOH A 104 PHE A 445 PRO A 447 ARG B 341 SITE 2 AC6 6 HOH B 539 HOH B 583 SITE 1 AC7 8 EDO A 8 HOH A 60 HOH A 147 PHE A 408 SITE 2 AC7 8 GLN A 410 PRO A 455 ALA A 456 HOH A 749 SITE 1 AC8 9 EDO A 7 TYR A 250 ASN A 252 GLU A 255 SITE 2 AC8 9 GLN A 410 TRP A 411 ARG A 443 HOH A 855 SITE 3 AC8 9 HOH A 966 SITE 1 AC9 6 HOH A 65 HOH A 113 LEU A 279 THR A 281 SITE 2 AC9 6 ARG A 287 LEU A 310 SITE 1 BC1 7 HOH A 31 HOH A 34 HOH A 158 ASN A 309 SITE 2 BC1 7 LEU A 310 ASN A 311 LEU A 325 SITE 1 BC2 3 SER B 379 THR B 380 HOH B 618 SITE 1 BC3 7 PRO A 317 THR A 318 GLU A 319 ASP A 320 SITE 2 BC3 7 LYS A 372 MET A 424 ASN A 425 SITE 1 BC4 6 GLN A 277 LEU A 278 HOH A 603 HOH A 931 SITE 2 BC4 6 HOH B 119 GLU B 236 SITE 1 BC5 10 HOH A 39 HOH A 48 HOH A 130 HOH A 150 SITE 2 BC5 10 PRO A 243 PRO A 280 THR A 281 PRO B 243 SITE 3 BC5 10 PRO B 280 THR B 281 SITE 1 BC6 9 IMD A 23 GLU A 359 LYS A 449 HOH B 46 SITE 2 BC6 9 HIS B 358 GLU B 359 TRP B 381 HOH B 718 SITE 3 BC6 9 HOH B 814 SITE 1 BC7 9 HOH A 40 HIS A 358 GLU A 359 TRP A 381 SITE 2 BC7 9 HOH A 873 HOH A 961 IMD B 22 GLU B 359 SITE 3 BC7 9 LYS B 449 SITE 1 BC8 5 HOH A 70 GLU A 236 HOH A 667 LEU B 278 SITE 2 BC8 5 LEU B 325 SITE 1 BC9 6 ARG A 299 GLY A 300 SER A 379 THR A 380 SITE 2 BC9 6 HOH A 841 HOH A 894 SITE 1 CC1 7 GLY A 451 TYR A 452 HOH A 681 HOH A 953 SITE 2 CC1 7 HOH A 956 ALA B 354 ASN B 355 SITE 1 CC2 5 LEU B 272 GLN B 273 GLY B 274 THR B 276 SITE 2 CC2 5 HOH B 770 SITE 1 CC3 5 LEU A 272 GLN A 273 GLY A 274 THR A 276 SITE 2 CC3 5 HOH A 631 SITE 1 CC4 5 EDO A 16 HIS A 358 GLU B 359 TRP B 381 SITE 2 CC4 5 LYS B 449 SITE 1 CC5 6 GLU A 359 TRP A 381 LYS A 449 EDO B 15 SITE 2 CC5 6 HIS B 358 HOH B 814 CRYST1 65.280 79.024 69.703 90.00 99.87 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015319 0.000000 0.002666 0.00000 SCALE2 0.000000 0.012654 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014562 0.00000 MASTER 402 0 23 11 36 0 49 6 0 0 0 50 END