HEADER STRUCTURAL PROTEIN 15-NOV-10 3PLT TITLE CRYSTAL STRUCTURE OF LSP1 FROM SACCHAROMYCES CEREVISIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPHINGOLIPID LONG CHAIN BASE-RESPONSIVE PROTEIN LSP1; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 36-267; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: LSP1, YPL004C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PETM14-CCDB; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNZ KEYWDS EISOSOMES, LSP1, PIL1, BAR DOMAIN, PLASMA MEMBRANE, SELF-ASSEMBLY, KEYWDS 2 PHOSPHOPROTEIN, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.E.ZIOLKOWSKA,T.C.WALTHER REVDAT 3 20-JUL-11 3PLT 1 JRNL REVDAT 2 06-JUL-11 3PLT 1 JRNL REVDAT 1 22-JUN-11 3PLT 0 JRNL AUTH N.E.ZIOLKOWSKA,L.KAROTKI,M.REHMAN,J.T.HUISKONEN,T.C.WALTHER JRNL TITL EISOSOME-DRIVEN PLASMA MEMBRANE ORGANIZATION IS MEDIATED BY JRNL TITL 2 BAR DOMAINS. JRNL REF NAT.STRUCT.MOL.BIOL. V. 18 854 2011 JRNL REFN ISSN 1545-9993 JRNL PMID 21685922 JRNL DOI 10.1038/NSMB.2080 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 16807 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.296 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 905 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.97 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1146 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.03 REMARK 3 BIN R VALUE (WORKING SET) : 0.3250 REMARK 3 BIN FREE R VALUE SET COUNT : 52 REMARK 3 BIN FREE R VALUE : 0.4140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5031 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 6 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.80000 REMARK 3 B22 (A**2) : 2.49000 REMARK 3 B33 (A**2) : -1.31000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.92000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.480 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.395 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 46.745 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.897 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5098 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3530 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6877 ; 1.130 ; 1.991 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8639 ; 0.814 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 630 ; 4.781 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 244 ;35.353 ;25.041 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 971 ;19.041 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;18.007 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 781 ; 0.061 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5619 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 953 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3161 ; 0.351 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1273 ; 0.056 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5072 ; 0.697 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1937 ; 1.030 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1805 ; 1.911 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 52 A 264 4 REMARK 3 1 B 52 B 264 4 REMARK 3 1 C 52 C 264 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 2791 ; 0.93 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 2791 ; 0.76 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 C (A): 2791 ; 0.72 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 2791 ; 0.27 ; 2.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 2791 ; 0.27 ; 2.00 REMARK 3 MEDIUM THERMAL 1 C (A**2): 2791 ; 0.27 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 52 A 125 REMARK 3 ORIGIN FOR THE GROUP (A): 56.2660 37.2160 46.1160 REMARK 3 T TENSOR REMARK 3 T11: 0.3287 T22: 0.1374 REMARK 3 T33: 0.3689 T12: 0.0512 REMARK 3 T13: 0.0398 T23: 0.0388 REMARK 3 L TENSOR REMARK 3 L11: 15.0659 L22: 1.3317 REMARK 3 L33: 4.1354 L12: -0.3938 REMARK 3 L13: 6.1432 L23: -0.1738 REMARK 3 S TENSOR REMARK 3 S11: -0.5287 S12: 0.7179 S13: 1.6971 REMARK 3 S21: -0.1784 S22: -0.3172 S23: -0.1142 REMARK 3 S31: -0.1919 S32: 0.2106 S33: 0.8459 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 126 A 264 REMARK 3 ORIGIN FOR THE GROUP (A): 71.3860 35.3710 56.8130 REMARK 3 T TENSOR REMARK 3 T11: 0.3340 T22: 0.2912 REMARK 3 T33: 0.3950 T12: 0.0517 REMARK 3 T13: 0.0130 T23: -0.0343 REMARK 3 L TENSOR REMARK 3 L11: 13.5537 L22: 0.0100 REMARK 3 L33: 0.8967 L12: 0.0432 REMARK 3 L13: 2.2496 L23: 0.0175 REMARK 3 S TENSOR REMARK 3 S11: -0.3107 S12: -0.0233 S13: 0.4325 REMARK 3 S21: -0.0171 S22: -0.0485 S23: 0.0251 REMARK 3 S31: -0.1826 S32: -0.0611 S33: 0.3592 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 52 B 222 REMARK 3 ORIGIN FOR THE GROUP (A): 43.5470 26.8250 39.8320 REMARK 3 T TENSOR REMARK 3 T11: 0.3460 T22: 0.2582 REMARK 3 T33: 0.2904 T12: 0.0889 REMARK 3 T13: 0.0541 T23: -0.1123 REMARK 3 L TENSOR REMARK 3 L11: 9.9828 L22: 0.4610 REMARK 3 L33: 5.9615 L12: 0.8645 REMARK 3 L13: 6.5695 L23: 0.6614 REMARK 3 S TENSOR REMARK 3 S11: 0.1859 S12: 0.1195 S13: 0.0656 REMARK 3 S21: -0.1769 S22: -0.2654 S23: 0.0185 REMARK 3 S31: 0.2462 S32: -0.2204 S33: 0.0795 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 223 B 264 REMARK 3 ORIGIN FOR THE GROUP (A): 67.0260 24.3940 70.1870 REMARK 3 T TENSOR REMARK 3 T11: 0.4137 T22: 0.4565 REMARK 3 T33: 0.1442 T12: 0.0360 REMARK 3 T13: 0.1595 T23: 0.0871 REMARK 3 L TENSOR REMARK 3 L11: 29.4840 L22: 3.4202 REMARK 3 L33: 8.9234 L12: 2.7749 REMARK 3 L13: 7.4865 L23: -0.6103 REMARK 3 S TENSOR REMARK 3 S11: 0.4872 S12: -1.8545 S13: -0.7938 REMARK 3 S21: 0.5707 S22: -0.3731 S23: 0.2233 REMARK 3 S31: 0.5410 S32: -0.0740 S33: -0.1141 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 52 C 109 REMARK 3 ORIGIN FOR THE GROUP (A): -0.2020 20.4000 38.4920 REMARK 3 T TENSOR REMARK 3 T11: 0.3238 T22: 0.1263 REMARK 3 T33: 0.1799 T12: 0.0150 REMARK 3 T13: 0.0850 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 9.1003 L22: 1.9533 REMARK 3 L33: 17.7283 L12: -2.4380 REMARK 3 L13: 10.5992 L23: -3.9003 REMARK 3 S TENSOR REMARK 3 S11: -0.3257 S12: 0.4960 S13: 0.9498 REMARK 3 S21: -0.0177 S22: -0.4692 S23: -0.1668 REMARK 3 S31: -0.4993 S32: 0.9581 S33: 0.7949 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 110 C 264 REMARK 3 ORIGIN FOR THE GROUP (A): -9.3550 15.7300 22.3020 REMARK 3 T TENSOR REMARK 3 T11: 0.3080 T22: 0.1492 REMARK 3 T33: 0.2120 T12: 0.0174 REMARK 3 T13: 0.1151 T23: 0.0333 REMARK 3 L TENSOR REMARK 3 L11: 3.3298 L22: 1.2504 REMARK 3 L33: 10.3327 L12: -1.4645 REMARK 3 L13: 5.1604 L23: -2.4452 REMARK 3 S TENSOR REMARK 3 S11: 0.0297 S12: 0.2382 S13: 0.3425 REMARK 3 S21: -0.0340 S22: -0.1243 S23: -0.0047 REMARK 3 S31: 0.2007 S32: 0.2172 S33: 0.0946 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3PLT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-NOV-10. REMARK 100 THE RCSB ID CODE IS RCSB062530. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 11 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979700 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17725 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.7500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.89600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.910 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000, MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NACL, 20MM PHENOL, 20% PEG 8000, REMARK 280 0.1M CAPS, PH 11, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 136.58000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 19.37650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 136.58000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 19.37650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -12.26627 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 74.50603 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 34 REMARK 465 PRO A 35 REMARK 465 ALA A 36 REMARK 465 SER A 37 REMARK 465 ILE A 38 REMARK 465 ALA A 39 REMARK 465 SER A 40 REMARK 465 SER A 41 REMARK 465 PHE A 42 REMARK 465 ARG A 43 REMARK 465 LYS A 44 REMARK 465 ASN A 45 REMARK 465 ALA A 46 REMARK 465 ALA A 47 REMARK 465 GLY A 48 REMARK 465 ASN A 49 REMARK 465 PHE A 50 REMARK 465 MET A 265 REMARK 465 ALA A 266 REMARK 465 ALA A 267 REMARK 465 GLY B 34 REMARK 465 PRO B 35 REMARK 465 ALA B 36 REMARK 465 SER B 37 REMARK 465 ILE B 38 REMARK 465 ALA B 39 REMARK 465 SER B 40 REMARK 465 SER B 41 REMARK 465 PHE B 42 REMARK 465 ARG B 43 REMARK 465 LYS B 44 REMARK 465 ASN B 45 REMARK 465 ALA B 46 REMARK 465 ALA B 47 REMARK 465 GLY B 48 REMARK 465 ASN B 49 REMARK 465 PHE B 50 REMARK 465 VAL B 232 REMARK 465 THR B 233 REMARK 465 PRO B 234 REMARK 465 GLY B 235 REMARK 465 GLU B 236 REMARK 465 ALA B 237 REMARK 465 ARG B 238 REMARK 465 MET B 265 REMARK 465 ALA B 266 REMARK 465 ALA B 267 REMARK 465 GLY C 34 REMARK 465 PRO C 35 REMARK 465 ALA C 36 REMARK 465 SER C 37 REMARK 465 ILE C 38 REMARK 465 ALA C 39 REMARK 465 SER C 40 REMARK 465 SER C 41 REMARK 465 PHE C 42 REMARK 465 ARG C 43 REMARK 465 LYS C 44 REMARK 465 ASN C 45 REMARK 465 ALA C 46 REMARK 465 ALA C 47 REMARK 465 GLY C 48 REMARK 465 ASN C 49 REMARK 465 PHE C 50 REMARK 465 GLY C 51 REMARK 465 MET C 265 REMARK 465 ALA C 266 REMARK 465 ALA C 267 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 52 C - N - CA ANGL. DEV. = 9.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 92 60.66 -109.85 REMARK 500 ASN A 93 -154.31 -131.93 REMARK 500 ASP A 160 59.86 178.54 REMARK 500 ALA A 198 -76.01 -58.07 REMARK 500 PRO A 231 163.89 -45.10 REMARK 500 ASP B 92 35.46 -93.79 REMARK 500 ASP B 94 154.21 -49.09 REMARK 500 TYR B 158 -61.88 84.22 REMARK 500 PRO B 161 66.54 -62.80 REMARK 500 ILE B 166 -63.25 -27.25 REMARK 500 ASP B 242 71.26 -150.74 REMARK 500 ASN C 93 -162.34 -117.61 REMARK 500 ASP C 160 91.87 -161.14 REMARK 500 PRO C 161 73.47 -61.20 REMARK 500 LYS C 165 -43.21 69.93 REMARK 500 LEU C 223 -31.91 -38.07 REMARK 500 SER C 230 109.77 -47.00 REMARK 500 PRO C 231 153.11 -49.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3KQ1 RELATED DB: PDB DBREF 3PLT A 36 267 UNP Q12230 LSP1_YEAST 36 267 DBREF 3PLT B 36 267 UNP Q12230 LSP1_YEAST 36 267 DBREF 3PLT C 36 267 UNP Q12230 LSP1_YEAST 36 267 SEQADV 3PLT GLY A 34 UNP Q12230 EXPRESSION TAG SEQADV 3PLT PRO A 35 UNP Q12230 EXPRESSION TAG SEQADV 3PLT GLY B 34 UNP Q12230 EXPRESSION TAG SEQADV 3PLT PRO B 35 UNP Q12230 EXPRESSION TAG SEQADV 3PLT GLY C 34 UNP Q12230 EXPRESSION TAG SEQADV 3PLT PRO C 35 UNP Q12230 EXPRESSION TAG SEQRES 1 A 234 GLY PRO ALA SER ILE ALA SER SER PHE ARG LYS ASN ALA SEQRES 2 A 234 ALA GLY ASN PHE GLY PRO GLU LEU ALA ARG LYS LEU SER SEQRES 3 A 234 GLN LEU VAL LYS THR GLU LYS GLY VAL LEU ARG ALA MET SEQRES 4 A 234 GLU VAL VAL ALA SER GLU ARG ARG GLU ALA ALA LYS GLN SEQRES 5 A 234 LEU SER LEU TRP GLY ALA ASP ASN ASP ASP ASP VAL SER SEQRES 6 A 234 ASP VAL THR ASP LYS LEU GLY VAL LEU ILE TYR GLU LEU SEQRES 7 A 234 GLY GLU LEU GLN ASP GLN PHE ILE ASP LYS TYR ASP GLN SEQRES 8 A 234 TYR ARG VAL THR LEU LYS SER ILE ARG ASN ILE GLU ALA SEQRES 9 A 234 SER VAL GLN PRO SER ARG ASP ARG LYS GLU LYS ILE THR SEQRES 10 A 234 ASP GLU ILE ALA HIS LEU LYS TYR LYS ASP PRO GLN SER SEQRES 11 A 234 THR LYS ILE PRO VAL LEU GLU GLN GLU LEU VAL ARG ALA SEQRES 12 A 234 GLU ALA GLU SER LEU VAL ALA GLU ALA GLN LEU SER ASN SEQRES 13 A 234 ILE THR ARG GLU LYS LEU LYS ALA ALA TYR SER TYR MET SEQRES 14 A 234 PHE ASP SER LEU ARG GLU LEU SER GLU LYS PHE ALA LEU SEQRES 15 A 234 ILE ALA GLY TYR GLY LYS ALA LEU LEU GLU LEU LEU ASP SEQRES 16 A 234 ASP SER PRO VAL THR PRO GLY GLU ALA ARG PRO ALA TYR SEQRES 17 A 234 ASP GLY TYR GLU ALA SER ARG GLN ILE ILE MET ASP ALA SEQRES 18 A 234 GLU SER ALA LEU GLU SER TRP THR LEU ASP MET ALA ALA SEQRES 1 B 234 GLY PRO ALA SER ILE ALA SER SER PHE ARG LYS ASN ALA SEQRES 2 B 234 ALA GLY ASN PHE GLY PRO GLU LEU ALA ARG LYS LEU SER SEQRES 3 B 234 GLN LEU VAL LYS THR GLU LYS GLY VAL LEU ARG ALA MET SEQRES 4 B 234 GLU VAL VAL ALA SER GLU ARG ARG GLU ALA ALA LYS GLN SEQRES 5 B 234 LEU SER LEU TRP GLY ALA ASP ASN ASP ASP ASP VAL SER SEQRES 6 B 234 ASP VAL THR ASP LYS LEU GLY VAL LEU ILE TYR GLU LEU SEQRES 7 B 234 GLY GLU LEU GLN ASP GLN PHE ILE ASP LYS TYR ASP GLN SEQRES 8 B 234 TYR ARG VAL THR LEU LYS SER ILE ARG ASN ILE GLU ALA SEQRES 9 B 234 SER VAL GLN PRO SER ARG ASP ARG LYS GLU LYS ILE THR SEQRES 10 B 234 ASP GLU ILE ALA HIS LEU LYS TYR LYS ASP PRO GLN SER SEQRES 11 B 234 THR LYS ILE PRO VAL LEU GLU GLN GLU LEU VAL ARG ALA SEQRES 12 B 234 GLU ALA GLU SER LEU VAL ALA GLU ALA GLN LEU SER ASN SEQRES 13 B 234 ILE THR ARG GLU LYS LEU LYS ALA ALA TYR SER TYR MET SEQRES 14 B 234 PHE ASP SER LEU ARG GLU LEU SER GLU LYS PHE ALA LEU SEQRES 15 B 234 ILE ALA GLY TYR GLY LYS ALA LEU LEU GLU LEU LEU ASP SEQRES 16 B 234 ASP SER PRO VAL THR PRO GLY GLU ALA ARG PRO ALA TYR SEQRES 17 B 234 ASP GLY TYR GLU ALA SER ARG GLN ILE ILE MET ASP ALA SEQRES 18 B 234 GLU SER ALA LEU GLU SER TRP THR LEU ASP MET ALA ALA SEQRES 1 C 234 GLY PRO ALA SER ILE ALA SER SER PHE ARG LYS ASN ALA SEQRES 2 C 234 ALA GLY ASN PHE GLY PRO GLU LEU ALA ARG LYS LEU SER SEQRES 3 C 234 GLN LEU VAL LYS THR GLU LYS GLY VAL LEU ARG ALA MET SEQRES 4 C 234 GLU VAL VAL ALA SER GLU ARG ARG GLU ALA ALA LYS GLN SEQRES 5 C 234 LEU SER LEU TRP GLY ALA ASP ASN ASP ASP ASP VAL SER SEQRES 6 C 234 ASP VAL THR ASP LYS LEU GLY VAL LEU ILE TYR GLU LEU SEQRES 7 C 234 GLY GLU LEU GLN ASP GLN PHE ILE ASP LYS TYR ASP GLN SEQRES 8 C 234 TYR ARG VAL THR LEU LYS SER ILE ARG ASN ILE GLU ALA SEQRES 9 C 234 SER VAL GLN PRO SER ARG ASP ARG LYS GLU LYS ILE THR SEQRES 10 C 234 ASP GLU ILE ALA HIS LEU LYS TYR LYS ASP PRO GLN SER SEQRES 11 C 234 THR LYS ILE PRO VAL LEU GLU GLN GLU LEU VAL ARG ALA SEQRES 12 C 234 GLU ALA GLU SER LEU VAL ALA GLU ALA GLN LEU SER ASN SEQRES 13 C 234 ILE THR ARG GLU LYS LEU LYS ALA ALA TYR SER TYR MET SEQRES 14 C 234 PHE ASP SER LEU ARG GLU LEU SER GLU LYS PHE ALA LEU SEQRES 15 C 234 ILE ALA GLY TYR GLY LYS ALA LEU LEU GLU LEU LEU ASP SEQRES 16 C 234 ASP SER PRO VAL THR PRO GLY GLU ALA ARG PRO ALA TYR SEQRES 17 C 234 ASP GLY TYR GLU ALA SER ARG GLN ILE ILE MET ASP ALA SEQRES 18 C 234 GLU SER ALA LEU GLU SER TRP THR LEU ASP MET ALA ALA FORMUL 4 HOH *6(H2 O) HELIX 1 1 ALA A 55 ASP A 92 1 38 HELIX 2 2 ASP A 94 ASP A 160 1 67 HELIX 3 3 THR A 164 GLU A 225 1 62 HELIX 4 4 GLY A 243 TRP A 261 1 19 HELIX 5 5 PRO B 52 LEU B 54 5 3 HELIX 6 6 ALA B 55 ALA B 91 1 37 HELIX 7 7 ASP B 94 LYS B 157 1 64 HELIX 8 8 LYS B 165 GLU B 225 1 61 HELIX 9 9 GLY B 243 SER B 260 1 18 HELIX 10 10 LEU C 54 ALA C 91 1 38 HELIX 11 11 ASP C 94 ASP C 160 1 67 HELIX 12 12 LYS C 165 LEU C 224 1 60 HELIX 13 13 GLU C 225 LEU C 227 5 3 HELIX 14 14 GLY C 243 SER C 260 1 18 CRYST1 273.160 38.753 75.509 90.00 99.35 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003661 0.000000 0.000603 0.00000 SCALE2 0.000000 0.025804 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013422 0.00000 MASTER 503 0 0 14 0 0 0 6 0 0 0 54 END