HEADER MEMBRANE PROTEIN 10-NOV-10 3PJN TITLE THE CRYSTAL STRUCTURE OF TP34 BOUND TO ZN(II) ION AT PH 7.5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 34 KDA MEMBRANE ANTIGEN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PATHOGEN-SPECIFIC MEMBRANE ANTIGEN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TREPONEMA PALLIDUM; SOURCE 3 ORGANISM_TAXID: 160; SOURCE 4 GENE: TPD, TP_0971; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS IG FOLD, METAL BINDING, HUMAN LACTOFERRIN, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.A.BRAUTIGAM,R.K.DEKA,D.R.TOMCHICK,M.MACHIUS,M.V.NORGARD REVDAT 1 02-NOV-11 3PJN 0 JRNL AUTH C.A.BRAUTIGAM,R.K.DEKA,Z.OUYANG,M.GOLDBERG,M.MACHIUS, JRNL AUTH 2 G.KNUTSEN,D.R.TOMCHICK,M.V.NORGARD JRNL TITL CHARACTERIZATION OF THE TP34 LIPOPROTEIN FROM TREPONEMA JRNL TITL 2 PALLIDUM SUGGESTS A ROLE IN TRANSITION METAL HOMEOSTASIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 38888 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1569 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.9201 - 3.7801 0.99 3590 159 0.1731 0.1809 REMARK 3 2 3.7801 - 3.0010 1.00 3478 136 0.1732 0.1978 REMARK 3 3 3.0010 - 2.6219 1.00 3410 149 0.1912 0.2218 REMARK 3 4 2.6219 - 2.3822 1.00 3407 142 0.1901 0.2159 REMARK 3 5 2.3822 - 2.2115 1.00 3410 125 0.1677 0.2174 REMARK 3 6 2.2115 - 2.0812 1.00 3373 144 0.1675 0.1986 REMARK 3 7 2.0812 - 1.9769 1.00 3345 156 0.1545 0.2237 REMARK 3 8 1.9769 - 1.8909 1.00 3341 160 0.1653 0.1982 REMARK 3 9 1.8909 - 1.8181 1.00 3310 136 0.1788 0.2397 REMARK 3 10 1.8181 - 1.7554 1.00 3366 138 0.2166 0.2576 REMARK 3 11 1.7554 - 1.7000 0.98 3289 124 0.2544 0.2930 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.40 REMARK 3 SHRINKAGE RADIUS : 1.17 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 39.40 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.95740 REMARK 3 B22 (A**2) : -2.76090 REMARK 3 B33 (A**2) : -0.19650 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2610 REMARK 3 ANGLE : 1.342 3552 REMARK 3 CHIRALITY : 0.103 338 REMARK 3 PLANARITY : 0.006 485 REMARK 3 DIHEDRAL : 13.133 930 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: chain A REMARK 3 ORIGIN FOR THE GROUP (A): 10.8580 40.8579 62.0672 REMARK 3 T TENSOR REMARK 3 T11: 0.0769 T22: 0.1522 REMARK 3 T33: 0.1258 T12: 0.0050 REMARK 3 T13: -0.0123 T23: -0.0368 REMARK 3 L TENSOR REMARK 3 L11: 0.4640 L22: 1.1843 REMARK 3 L33: 1.2847 L12: 0.2693 REMARK 3 L13: 0.7184 L23: 0.7842 REMARK 3 S TENSOR REMARK 3 S11: 0.0126 S12: -0.0309 S13: 0.0262 REMARK 3 S21: -0.0999 S22: 0.0221 S23: -0.0047 REMARK 3 S31: -0.0071 S32: 0.0148 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: chain B REMARK 3 ORIGIN FOR THE GROUP (A): 6.6213 14.8130 52.7197 REMARK 3 T TENSOR REMARK 3 T11: 0.2085 T22: 0.1072 REMARK 3 T33: 0.1454 T12: -0.0003 REMARK 3 T13: -0.0881 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 0.5121 L22: 1.3925 REMARK 3 L33: 1.0858 L12: 0.5969 REMARK 3 L13: 0.6482 L23: 0.9633 REMARK 3 S TENSOR REMARK 3 S11: 0.1483 S12: -0.0813 S13: -0.1079 REMARK 3 S21: 0.1294 S22: 0.0271 S23: -0.0529 REMARK 3 S31: 0.2133 S32: -0.0296 S33: 0.0009 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PJN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-NOV-10. REMARK 100 THE RCSB ID CODE IS RCSB062453. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : SI-111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38964 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 32.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BICINE, 2.4 M AMMONIUM SULFATE, REMARK 280 PH 9, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.28650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.17950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.69850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.17950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.28650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.69850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -489.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -26 REMARK 465 SER A -25 REMARK 465 TYR A -24 REMARK 465 TYR A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 ASP A -16 REMARK 465 TYR A -15 REMARK 465 ASP A -14 REMARK 465 ILE A -13 REMARK 465 PRO A -12 REMARK 465 THR A -11 REMARK 465 THR A -10 REMARK 465 GLU A -9 REMARK 465 ASN A -8 REMARK 465 LEU A -7 REMARK 465 TYR A -6 REMARK 465 PHE A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 ALA A -2 REMARK 465 MET A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 GLY A 2 REMARK 465 GLY A 3 REMARK 465 GLY A 4 REMARK 465 GLY A 5 REMARK 465 GLU A 6 REMARK 465 HIS A 7 REMARK 465 GLN A 8 REMARK 465 HIS A 9 REMARK 465 GLY A 10 REMARK 465 GLU A 11 REMARK 465 GLU A 12 REMARK 465 MET A 13 REMARK 465 MET A 14 REMARK 465 ALA A 15 REMARK 465 ALA A 16 REMARK 465 VAL A 17 REMARK 465 PRO A 18 REMARK 465 ALA A 19 REMARK 465 PRO A 20 REMARK 465 ASP A 21 REMARK 465 ALA A 22 REMARK 465 GLU A 23 REMARK 465 GLY A 24 REMARK 465 ALA A 25 REMARK 465 ALA A 26 REMARK 465 GLY A 27 REMARK 465 MET B -26 REMARK 465 SER B -25 REMARK 465 TYR B -24 REMARK 465 TYR B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 ASP B -16 REMARK 465 TYR B -15 REMARK 465 ASP B -14 REMARK 465 ILE B -13 REMARK 465 PRO B -12 REMARK 465 THR B -11 REMARK 465 THR B -10 REMARK 465 GLU B -9 REMARK 465 ASN B -8 REMARK 465 LEU B -7 REMARK 465 TYR B -6 REMARK 465 PHE B -5 REMARK 465 GLN B -4 REMARK 465 GLY B -3 REMARK 465 ALA B -2 REMARK 465 MET B -1 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 GLY B 2 REMARK 465 GLY B 3 REMARK 465 GLY B 4 REMARK 465 GLY B 5 REMARK 465 GLU B 6 REMARK 465 HIS B 7 REMARK 465 GLN B 8 REMARK 465 HIS B 9 REMARK 465 GLY B 10 REMARK 465 GLU B 11 REMARK 465 GLU B 12 REMARK 465 MET B 13 REMARK 465 MET B 14 REMARK 465 ALA B 15 REMARK 465 ALA B 16 REMARK 465 VAL B 17 REMARK 465 PRO B 18 REMARK 465 ALA B 19 REMARK 465 PRO B 20 REMARK 465 ASP B 21 REMARK 465 ALA B 22 REMARK 465 GLU B 23 REMARK 465 GLY B 24 REMARK 465 ALA B 25 REMARK 465 ALA B 26 REMARK 465 GLY B 27 REMARK 465 PHE B 28 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 49 -166.50 -163.04 REMARK 500 PHE B 49 -169.26 -167.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 187 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 149 NE2 REMARK 620 2 HIS A 55 NE2 115.3 REMARK 620 3 HOH B 262 O 112.8 109.0 REMARK 620 4 HOH A 271 O 111.8 95.9 110.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 189 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 30 OE2 REMARK 620 2 ASP A 121 OD2 102.8 REMARK 620 3 HOH A 270 O 88.5 90.8 REMARK 620 4 HOH A 274 O 113.6 100.8 151.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 188 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 149 NE2 REMARK 620 2 HIS B 55 NE2 101.7 REMARK 620 3 HOH A 273 O 107.3 116.5 REMARK 620 4 HOH A 272 O 112.6 108.7 109.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 186 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 124 NE2 REMARK 620 2 HIS B 155 NE2 111.2 REMARK 620 3 HIS A 70 NE2 144.3 104.3 REMARK 620 4 GLU A 72 OE1 84.5 99.2 93.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 186 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 124 NE2 REMARK 620 2 HIS A 155 NE2 110.8 REMARK 620 3 HIS B 70 NE2 145.1 103.7 REMARK 620 4 GLU B 72 OE2 85.4 99.9 93.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 189 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 43 ND1 REMARK 620 2 ASP B 38 OD2 72.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 188 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 43 NE2 REMARK 620 2 ASP B 36 OD2 106.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 190 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 36 OD2 REMARK 620 2 HIS A 43 NE2 93.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 194 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 74 OD1 REMARK 620 2 HIS A 76 NE2 82.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 192 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 76 NE2 REMARK 620 2 HOH A 296 O 115.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 187 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 121 OD2 REMARK 620 2 GLU B 30 OE2 97.7 REMARK 620 3 HOH B 230 O 93.0 87.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 191 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 38 OD1 REMARK 620 2 ASP A 38 OD2 52.9 REMARK 620 3 HIS A 43 ND1 83.9 80.4 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 186 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 187 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 188 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 189 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 190 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 191 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 192 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 193 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 194 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 195 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 196 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 186 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 187 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 188 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 189 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 190 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 191 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2O6F RELATED DB: PDB REMARK 900 RELATED ID: 2O6C RELATED DB: PDB REMARK 900 RELATED ID: 2O6D RELATED DB: PDB REMARK 900 RELATED ID: 2O6E RELATED DB: PDB REMARK 900 RELATED ID: 3PJL RELATED DB: PDB REMARK 900 RELATED ID: 3PJM RELATED DB: PDB REMARK 900 RELATED ID: 3PJO RELATED DB: PDB DBREF 3PJN A 2 185 UNP P19478 TA34_TREPA 21 204 DBREF 3PJN B 2 185 UNP P19478 TA34_TREPA 21 204 SEQADV 3PJN MET A -26 UNP P19478 EXPRESSION TAG SEQADV 3PJN SER A -25 UNP P19478 EXPRESSION TAG SEQADV 3PJN TYR A -24 UNP P19478 EXPRESSION TAG SEQADV 3PJN TYR A -23 UNP P19478 EXPRESSION TAG SEQADV 3PJN HIS A -22 UNP P19478 EXPRESSION TAG SEQADV 3PJN HIS A -21 UNP P19478 EXPRESSION TAG SEQADV 3PJN HIS A -20 UNP P19478 EXPRESSION TAG SEQADV 3PJN HIS A -19 UNP P19478 EXPRESSION TAG SEQADV 3PJN HIS A -18 UNP P19478 EXPRESSION TAG SEQADV 3PJN HIS A -17 UNP P19478 EXPRESSION TAG SEQADV 3PJN ASP A -16 UNP P19478 EXPRESSION TAG SEQADV 3PJN TYR A -15 UNP P19478 EXPRESSION TAG SEQADV 3PJN ASP A -14 UNP P19478 EXPRESSION TAG SEQADV 3PJN ILE A -13 UNP P19478 EXPRESSION TAG SEQADV 3PJN PRO A -12 UNP P19478 EXPRESSION TAG SEQADV 3PJN THR A -11 UNP P19478 EXPRESSION TAG SEQADV 3PJN THR A -10 UNP P19478 EXPRESSION TAG SEQADV 3PJN GLU A -9 UNP P19478 EXPRESSION TAG SEQADV 3PJN ASN A -8 UNP P19478 EXPRESSION TAG SEQADV 3PJN LEU A -7 UNP P19478 EXPRESSION TAG SEQADV 3PJN TYR A -6 UNP P19478 EXPRESSION TAG SEQADV 3PJN PHE A -5 UNP P19478 EXPRESSION TAG SEQADV 3PJN GLN A -4 UNP P19478 EXPRESSION TAG SEQADV 3PJN GLY A -3 UNP P19478 EXPRESSION TAG SEQADV 3PJN ALA A -2 UNP P19478 EXPRESSION TAG SEQADV 3PJN MET A -1 UNP P19478 EXPRESSION TAG SEQADV 3PJN GLY A 0 UNP P19478 EXPRESSION TAG SEQADV 3PJN SER A 1 UNP P19478 EXPRESSION TAG SEQADV 3PJN MET B -26 UNP P19478 EXPRESSION TAG SEQADV 3PJN SER B -25 UNP P19478 EXPRESSION TAG SEQADV 3PJN TYR B -24 UNP P19478 EXPRESSION TAG SEQADV 3PJN TYR B -23 UNP P19478 EXPRESSION TAG SEQADV 3PJN HIS B -22 UNP P19478 EXPRESSION TAG SEQADV 3PJN HIS B -21 UNP P19478 EXPRESSION TAG SEQADV 3PJN HIS B -20 UNP P19478 EXPRESSION TAG SEQADV 3PJN HIS B -19 UNP P19478 EXPRESSION TAG SEQADV 3PJN HIS B -18 UNP P19478 EXPRESSION TAG SEQADV 3PJN HIS B -17 UNP P19478 EXPRESSION TAG SEQADV 3PJN ASP B -16 UNP P19478 EXPRESSION TAG SEQADV 3PJN TYR B -15 UNP P19478 EXPRESSION TAG SEQADV 3PJN ASP B -14 UNP P19478 EXPRESSION TAG SEQADV 3PJN ILE B -13 UNP P19478 EXPRESSION TAG SEQADV 3PJN PRO B -12 UNP P19478 EXPRESSION TAG SEQADV 3PJN THR B -11 UNP P19478 EXPRESSION TAG SEQADV 3PJN THR B -10 UNP P19478 EXPRESSION TAG SEQADV 3PJN GLU B -9 UNP P19478 EXPRESSION TAG SEQADV 3PJN ASN B -8 UNP P19478 EXPRESSION TAG SEQADV 3PJN LEU B -7 UNP P19478 EXPRESSION TAG SEQADV 3PJN TYR B -6 UNP P19478 EXPRESSION TAG SEQADV 3PJN PHE B -5 UNP P19478 EXPRESSION TAG SEQADV 3PJN GLN B -4 UNP P19478 EXPRESSION TAG SEQADV 3PJN GLY B -3 UNP P19478 EXPRESSION TAG SEQADV 3PJN ALA B -2 UNP P19478 EXPRESSION TAG SEQADV 3PJN MET B -1 UNP P19478 EXPRESSION TAG SEQADV 3PJN GLY B 0 UNP P19478 EXPRESSION TAG SEQADV 3PJN SER B 1 UNP P19478 EXPRESSION TAG SEQRES 1 A 212 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 A 212 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA MET SEQRES 3 A 212 GLY SER GLY GLY GLY GLY GLU HIS GLN HIS GLY GLU GLU SEQRES 4 A 212 MET MET ALA ALA VAL PRO ALA PRO ASP ALA GLU GLY ALA SEQRES 5 A 212 ALA GLY PHE ASP GLU PHE PRO ILE GLY GLU ASP ARG ASP SEQRES 6 A 212 VAL GLY PRO LEU HIS VAL GLY GLY VAL TYR PHE GLN PRO SEQRES 7 A 212 VAL GLU MET HIS PRO ALA PRO GLY ALA GLN PRO SER LYS SEQRES 8 A 212 GLU GLU ALA ASP CYS HIS ILE GLU ALA ASP ILE HIS ALA SEQRES 9 A 212 ASN GLU ALA GLY LYS ASP LEU GLY TYR GLY VAL GLY ASP SEQRES 10 A 212 PHE VAL PRO TYR LEU ARG VAL VAL ALA PHE LEU GLN LYS SEQRES 11 A 212 HIS GLY SER GLU LYS VAL GLN LYS VAL MET PHE ALA PRO SEQRES 12 A 212 MET ASN ALA GLY ASP GLY PRO HIS TYR GLY ALA ASN VAL SEQRES 13 A 212 LYS PHE GLU GLU GLY LEU GLY THR TYR LYS VAL ARG PHE SEQRES 14 A 212 GLU ILE ALA ALA PRO SER HIS ASP GLU TYR SER LEU HIS SEQRES 15 A 212 ILE ASP GLU GLN THR GLY VAL SER GLY ARG PHE TRP SER SEQRES 16 A 212 GLU PRO LEU VAL ALA GLU TRP ASP ASP PHE GLU TRP LYS SEQRES 17 A 212 GLY PRO GLN TRP SEQRES 1 B 212 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 B 212 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA MET SEQRES 3 B 212 GLY SER GLY GLY GLY GLY GLU HIS GLN HIS GLY GLU GLU SEQRES 4 B 212 MET MET ALA ALA VAL PRO ALA PRO ASP ALA GLU GLY ALA SEQRES 5 B 212 ALA GLY PHE ASP GLU PHE PRO ILE GLY GLU ASP ARG ASP SEQRES 6 B 212 VAL GLY PRO LEU HIS VAL GLY GLY VAL TYR PHE GLN PRO SEQRES 7 B 212 VAL GLU MET HIS PRO ALA PRO GLY ALA GLN PRO SER LYS SEQRES 8 B 212 GLU GLU ALA ASP CYS HIS ILE GLU ALA ASP ILE HIS ALA SEQRES 9 B 212 ASN GLU ALA GLY LYS ASP LEU GLY TYR GLY VAL GLY ASP SEQRES 10 B 212 PHE VAL PRO TYR LEU ARG VAL VAL ALA PHE LEU GLN LYS SEQRES 11 B 212 HIS GLY SER GLU LYS VAL GLN LYS VAL MET PHE ALA PRO SEQRES 12 B 212 MET ASN ALA GLY ASP GLY PRO HIS TYR GLY ALA ASN VAL SEQRES 13 B 212 LYS PHE GLU GLU GLY LEU GLY THR TYR LYS VAL ARG PHE SEQRES 14 B 212 GLU ILE ALA ALA PRO SER HIS ASP GLU TYR SER LEU HIS SEQRES 15 B 212 ILE ASP GLU GLN THR GLY VAL SER GLY ARG PHE TRP SER SEQRES 16 B 212 GLU PRO LEU VAL ALA GLU TRP ASP ASP PHE GLU TRP LYS SEQRES 17 B 212 GLY PRO GLN TRP HET ZN A 186 1 HET ZN A 187 1 HET ZN A 188 1 HET ZN A 189 1 HET ZN A 190 1 HET ZN A 191 1 HET ZN A 192 1 HET ZN A 193 1 HET ZN A 194 1 HET SO4 A 195 5 HET EDO A 196 4 HET ZN B 186 1 HET ZN B 187 1 HET ZN B 188 1 HET ZN B 189 1 HET ZN B 190 1 HET ZN B 191 1 HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 ZN 15(ZN 2+) FORMUL 12 SO4 O4 S 2- FORMUL 13 EDO C2 H6 O2 FORMUL 20 HOH *200(H2 O) HELIX 1 1 GLU A 79 GLY A 85 5 7 HELIX 2 2 GLU B 79 GLY B 85 5 7 SHEET 1 A 3 PHE A 31 PRO A 32 0 SHEET 2 A 3 LEU A 42 PHE A 49 -1 O TYR A 48 N PHE A 31 SHEET 3 A 3 ARG A 37 VAL A 39 -1 N ARG A 37 O VAL A 44 SHEET 1 B 7 PHE A 31 PRO A 32 0 SHEET 2 B 7 LEU A 42 PHE A 49 -1 O TYR A 48 N PHE A 31 SHEET 3 B 7 CYS A 69 ALA A 77 -1 O HIS A 76 N HIS A 43 SHEET 4 B 7 GLY A 122 VAL A 129 -1 O TYR A 125 N ALA A 73 SHEET 5 B 7 ALA A 115 ALA A 119 -1 N MET A 117 O HIS A 124 SHEET 6 B 7 SER B 153 HIS B 155 1 O HIS B 155 N ASN A 118 SHEET 7 B 7 MET A 54 HIS A 55 -1 N HIS A 55 O LEU B 154 SHEET 1 C 4 GLN A 110 MET A 113 0 SHEET 2 C 4 ARG A 96 LYS A 103 -1 N ALA A 99 O VAL A 112 SHEET 3 C 4 GLY A 136 ALA A 145 -1 O LYS A 139 N GLN A 102 SHEET 4 C 4 LEU A 171 TRP A 180 -1 O ALA A 173 N PHE A 142 SHEET 1 D 3 PHE B 31 PRO B 32 0 SHEET 2 D 3 LEU B 42 PHE B 49 -1 O TYR B 48 N PHE B 31 SHEET 3 D 3 ARG B 37 VAL B 39 -1 N ARG B 37 O VAL B 44 SHEET 1 E 7 PHE B 31 PRO B 32 0 SHEET 2 E 7 LEU B 42 PHE B 49 -1 O TYR B 48 N PHE B 31 SHEET 3 E 7 CYS B 69 ALA B 77 -1 O HIS B 76 N HIS B 43 SHEET 4 E 7 GLY B 122 VAL B 129 -1 O ALA B 127 N ILE B 71 SHEET 5 E 7 ALA B 115 ALA B 119 -1 N ALA B 115 O GLY B 126 SHEET 6 E 7 SER A 153 HIS A 155 1 N HIS A 155 O ASN B 118 SHEET 7 E 7 MET B 54 HIS B 55 -1 O HIS B 55 N LEU A 154 SHEET 1 F 4 GLN B 110 MET B 113 0 SHEET 2 F 4 ARG B 96 LYS B 103 -1 N ALA B 99 O VAL B 112 SHEET 3 F 4 GLY B 136 ALA B 145 -1 O ALA B 145 N ARG B 96 SHEET 4 F 4 LEU B 171 TRP B 180 -1 O PHE B 178 N TYR B 138 LINK NE2 HIS B 149 ZN ZN A 187 1555 1555 1.85 LINK OE2 GLU A 30 ZN ZN A 189 1555 1555 1.95 LINK NE2 HIS A 149 ZN ZN A 188 1555 1555 1.98 LINK NE2 HIS A 124 ZN ZN A 186 1555 1555 1.99 LINK NE2 HIS B 124 ZN ZN B 186 1555 1555 1.99 LINK NE2 HIS A 155 ZN ZN B 186 1555 1555 2.00 LINK NE2 HIS A 55 ZN ZN A 187 1555 1555 2.01 LINK NE2 HIS B 155 ZN ZN A 186 1555 1555 2.03 LINK OD2 ASP A 121 ZN ZN A 189 1555 1555 2.04 LINK NE2 HIS B 70 ZN ZN B 186 1555 1555 2.07 LINK NE2 HIS A 70 ZN ZN A 186 1555 1555 2.07 LINK NE2 HIS B 55 ZN ZN A 188 1555 1555 2.08 LINK ND1AHIS B 43 ZN ZN B 189 1555 1555 2.15 LINK OE1 GLU A 72 ZN ZN A 186 1555 1555 2.17 LINK NE2AHIS B 43 ZN ZN B 188 1555 1555 2.17 LINK OD2 ASP B 36 ZN ZN B 188 1555 1555 2.18 LINK OD2 ASP A 36 ZN ZN A 190 1555 1555 2.19 LINK OD1AASP A 74 ZN ZN A 194 1555 1555 2.21 LINK OE2 GLU B 72 ZN ZN B 186 1555 1555 2.22 LINK NE2BHIS A 76 ZN ZN A 192 1555 1555 2.24 LINK OD2 ASP B 121 ZN ZN B 187 1555 1555 2.28 LINK ND1 HIS A 104 ZN ZN A 193 1555 1555 2.30 LINK NE2AHIS A 76 ZN ZN A 194 1555 1555 2.32 LINK OD1 ASP B 74 ZN ZN B 190 1555 1555 2.32 LINK NE2 HIS A 43 ZN ZN A 190 1555 1555 2.33 LINK OE2 GLU B 30 ZN ZN B 187 1555 1555 2.46 LINK OD1 ASP A 38 ZN ZN A 191 1555 1555 2.47 LINK OD2 ASP A 38 ZN ZN A 191 1555 1555 2.51 LINK ND1 HIS A 43 ZN ZN A 191 1555 1555 2.59 LINK OD2 ASP B 38 ZN ZN B 189 1555 1555 2.66 LINK NE2 HIS B 76 ZN ZN B 191 1555 1555 2.67 LINK ZN ZN A 188 O HOH A 273 1555 1555 2.03 LINK ZN ZN A 189 O HOH A 270 1555 1555 2.16 LINK ZN ZN A 187 O HOH B 262 1555 1555 2.26 LINK ZN ZN A 189 O HOH A 274 1555 1555 2.31 LINK ZN ZN A 192 O HOH A 296 1555 1555 2.32 LINK ZN ZN A 188 O HOH A 272 1555 1555 2.33 LINK ZN ZN A 187 O HOH A 271 1555 1555 2.39 LINK ZN ZN B 187 O HOH B 230 1555 1555 2.42 CISPEP 1 HIS A 55 PRO A 56 0 -10.95 CISPEP 2 HIS B 55 PRO B 56 0 -8.23 SITE 1 AC1 5 HIS A 70 GLU A 72 MET A 117 HIS A 124 SITE 2 AC1 5 HIS B 155 SITE 1 AC2 4 HIS A 55 HOH A 271 HIS B 149 HOH B 262 SITE 1 AC3 5 HIS A 149 HOH A 272 HOH A 273 HIS B 55 SITE 2 AC3 5 LYS B 181 SITE 1 AC4 6 GLU A 30 GLU A 72 ASP A 121 HOH A 270 SITE 2 AC4 6 HOH A 274 HOH A 275 SITE 1 AC5 2 ASP A 36 HIS A 43 SITE 1 AC6 2 ASP A 38 HIS A 43 SITE 1 AC7 3 HIS A 43 HIS A 76 HOH A 296 SITE 1 AC8 1 HIS A 104 SITE 1 AC9 2 ASP A 74 HIS A 76 SITE 1 BC1 5 ARG A 165 TRP A 167 SER A 168 HOH A 228 SITE 2 BC1 5 HOH A 316 SITE 1 BC2 7 PHE A 31 PRO A 32 TYR A 48 ASP A 68 SITE 2 BC2 7 LYS A 130 LYS A 181 HOH A 197 SITE 1 BC3 5 HIS A 155 HIS B 70 GLU B 72 MET B 117 SITE 2 BC3 5 HIS B 124 SITE 1 BC4 4 GLU B 30 GLU B 72 ASP B 121 HOH B 230 SITE 1 BC5 2 ASP B 36 HIS B 43 SITE 1 BC6 2 ASP B 38 HIS B 43 SITE 1 BC7 2 ASP B 74 HIS B 76 SITE 1 BC8 2 ASP B 74 HIS B 76 CRYST1 34.573 65.397 152.359 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028924 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015291 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006563 0.00000 MASTER 546 0 17 2 28 0 23 6 0 0 0 34 END