HEADER MEMBRANE PROTEIN 10-NOV-10 3PJL TITLE THE CRYSTAL STRUCTURE OF TP34 BOUND TO CO (II) ION AT PH 7.5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 34 KDA MEMBRANE ANTIGEN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PATHOGEN-SPECIFIC MEMBRANE ANTIGEN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TREPONEMA PALLIDUM; SOURCE 3 ORGANISM_TAXID: 160; SOURCE 4 GENE: TPD, TP_0971; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS IG FOLD, METAL BINDING, HUMAN LACTOFERRIN, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.A.BRAUTIGAM,R.K.DEKA,D.R.TOMCHICK,M.MACHIUS,M.V.NORGARD REVDAT 1 02-NOV-11 3PJL 0 JRNL AUTH C.A.BRAUTIGAM,R.K.DEKA,Z.OUYANG,M.GOLDBERG,M.MACHIUS, JRNL AUTH 2 G.KNUTSEN,D.R.TOMCHICK,M.V.NORGARD JRNL TITL CHARACTERIZATION OF THE TP34 LIPOPROTEIN FROM TREPONEMA JRNL TITL 2 PALLIDUM SUGGESTS A ROLE IN TRANSITION METAL HOMEOSTASIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 39143 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1575 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.8993 - 3.7800 0.99 3615 157 0.1577 0.1812 REMARK 3 2 3.7800 - 3.0004 1.00 3486 136 0.1692 0.1987 REMARK 3 3 3.0004 - 2.6212 1.00 3430 152 0.1877 0.2227 REMARK 3 4 2.6212 - 2.3815 1.00 3424 143 0.1756 0.2303 REMARK 3 5 2.3815 - 2.2108 1.00 3423 122 0.1571 0.1884 REMARK 3 6 2.2108 - 2.0805 1.00 3395 148 0.1597 0.1935 REMARK 3 7 2.0805 - 1.9763 1.00 3355 155 0.1533 0.1860 REMARK 3 8 1.9763 - 1.8902 1.00 3349 162 0.1558 0.1797 REMARK 3 9 1.8902 - 1.8175 1.00 3344 144 0.1794 0.2056 REMARK 3 10 1.8175 - 1.7548 1.00 3401 136 0.2236 0.2760 REMARK 3 11 1.7548 - 1.7000 0.99 3346 120 0.3035 0.2917 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.39 REMARK 3 B_SOL : 41.31 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.18630 REMARK 3 B22 (A**2) : -5.47350 REMARK 3 B33 (A**2) : 1.28720 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 2619 REMARK 3 ANGLE : 1.425 3566 REMARK 3 CHIRALITY : 0.110 338 REMARK 3 PLANARITY : 0.007 487 REMARK 3 DIHEDRAL : 13.502 933 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: chain A REMARK 3 ORIGIN FOR THE GROUP (A): 10.5033 41.2829 61.8717 REMARK 3 T TENSOR REMARK 3 T11: 0.1081 T22: 0.1709 REMARK 3 T33: 0.1370 T12: -0.0005 REMARK 3 T13: 0.0001 T23: -0.0260 REMARK 3 L TENSOR REMARK 3 L11: 0.6720 L22: 1.5619 REMARK 3 L33: 1.2868 L12: 0.2342 REMARK 3 L13: 0.7649 L23: 0.7760 REMARK 3 S TENSOR REMARK 3 S11: -0.0127 S12: -0.0579 S13: 0.0168 REMARK 3 S21: -0.0909 S22: 0.0295 S23: -0.0206 REMARK 3 S31: -0.0309 S32: -0.0365 S33: -0.0109 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: chain B REMARK 3 ORIGIN FOR THE GROUP (A): 6.0969 15.1929 52.7538 REMARK 3 T TENSOR REMARK 3 T11: 0.2371 T22: 0.1288 REMARK 3 T33: 0.1597 T12: -0.0139 REMARK 3 T13: -0.0639 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 0.7723 L22: 1.9831 REMARK 3 L33: 1.7556 L12: 0.7763 REMARK 3 L13: 0.8980 L23: 1.0511 REMARK 3 S TENSOR REMARK 3 S11: 0.1918 S12: -0.0734 S13: -0.1349 REMARK 3 S21: 0.1683 S22: 0.0086 S23: -0.0749 REMARK 3 S31: 0.3067 S32: -0.1007 S33: -0.1925 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PJL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-NOV-10. REMARK 100 THE RCSB ID CODE IS RCSB062451. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : SI-111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39218 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 49.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BICINE, 2.4 M AMMONIUM SULFATE, REMARK 280 PH 9, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.20300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.18700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.99200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.18700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.20300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.99200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -117.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -26 REMARK 465 SER A -25 REMARK 465 TYR A -24 REMARK 465 TYR A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 ASP A -16 REMARK 465 TYR A -15 REMARK 465 ASP A -14 REMARK 465 ILE A -13 REMARK 465 PRO A -12 REMARK 465 THR A -11 REMARK 465 THR A -10 REMARK 465 GLU A -9 REMARK 465 ASN A -8 REMARK 465 LEU A -7 REMARK 465 TYR A -6 REMARK 465 PHE A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 ALA A -2 REMARK 465 MET A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 GLY A 2 REMARK 465 GLY A 3 REMARK 465 GLY A 4 REMARK 465 GLY A 5 REMARK 465 GLU A 6 REMARK 465 HIS A 7 REMARK 465 GLN A 8 REMARK 465 HIS A 9 REMARK 465 GLY A 10 REMARK 465 GLU A 11 REMARK 465 GLU A 12 REMARK 465 MET A 13 REMARK 465 MET A 14 REMARK 465 ALA A 15 REMARK 465 ALA A 16 REMARK 465 VAL A 17 REMARK 465 PRO A 18 REMARK 465 ALA A 19 REMARK 465 PRO A 20 REMARK 465 ASP A 21 REMARK 465 ALA A 22 REMARK 465 GLU A 23 REMARK 465 GLY A 24 REMARK 465 ALA A 25 REMARK 465 ALA A 26 REMARK 465 GLY A 27 REMARK 465 PHE A 28 REMARK 465 MET B -26 REMARK 465 SER B -25 REMARK 465 TYR B -24 REMARK 465 TYR B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 ASP B -16 REMARK 465 TYR B -15 REMARK 465 ASP B -14 REMARK 465 ILE B -13 REMARK 465 PRO B -12 REMARK 465 THR B -11 REMARK 465 THR B -10 REMARK 465 GLU B -9 REMARK 465 ASN B -8 REMARK 465 LEU B -7 REMARK 465 TYR B -6 REMARK 465 PHE B -5 REMARK 465 GLN B -4 REMARK 465 GLY B -3 REMARK 465 ALA B -2 REMARK 465 MET B -1 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 GLY B 2 REMARK 465 GLY B 3 REMARK 465 GLY B 4 REMARK 465 GLY B 5 REMARK 465 GLU B 6 REMARK 465 HIS B 7 REMARK 465 GLN B 8 REMARK 465 HIS B 9 REMARK 465 GLY B 10 REMARK 465 GLU B 11 REMARK 465 GLU B 12 REMARK 465 MET B 13 REMARK 465 MET B 14 REMARK 465 ALA B 15 REMARK 465 ALA B 16 REMARK 465 VAL B 17 REMARK 465 PRO B 18 REMARK 465 ALA B 19 REMARK 465 PRO B 20 REMARK 465 ASP B 21 REMARK 465 ALA B 22 REMARK 465 GLU B 23 REMARK 465 GLY B 24 REMARK 465 ALA B 25 REMARK 465 ALA B 26 REMARK 465 GLY B 27 REMARK 465 PHE B 28 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 49 -168.87 -168.02 REMARK 500 ALA A 119 -164.26 -121.12 REMARK 500 PHE B 49 -168.54 -165.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 186 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 124 NE2 REMARK 620 2 HIS A 155 NE2 103.4 REMARK 620 3 HIS B 70 NE2 151.8 101.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 187 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 149 NE2 REMARK 620 2 HOH A 304 O 174.2 REMARK 620 3 HOH A 305 O 98.7 86.2 REMARK 620 4 HIS A 55 NE2 101.0 82.9 79.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 186 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 155 NE2 REMARK 620 2 HIS A 124 NE2 104.5 REMARK 620 3 HIS A 70 NE2 96.9 158.0 REMARK 620 4 GLU A 72 OE2 96.1 80.7 92.1 REMARK 620 5 GLU A 72 OE1 151.8 78.1 80.6 56.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 188 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 192 O REMARK 620 2 HOH B 236 O 97.3 REMARK 620 3 HIS B 55 NE2 111.8 74.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 187 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 38 OD2 REMARK 620 2 ASP B 38 OD1 54.1 REMARK 620 3 HIS B 43 ND1 77.7 73.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 190 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 74 OD1 REMARK 620 2 HIS B 124 NE2 77.3 REMARK 620 3 HOH B 257 O 67.4 86.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 189 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 43 NE2 REMARK 620 2 ASP B 36 OD2 80.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 186 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 187 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 188 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 189 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 186 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 187 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 188 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 189 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 190 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2O6F RELATED DB: PDB REMARK 900 RELATED ID: 2O6C RELATED DB: PDB REMARK 900 RELATED ID: 2O6D RELATED DB: PDB REMARK 900 RELATED ID: 2O6E RELATED DB: PDB REMARK 900 RELATED ID: 3PJO RELATED DB: PDB REMARK 900 RELATED ID: 3PJM RELATED DB: PDB REMARK 900 RELATED ID: 3PJN RELATED DB: PDB DBREF 3PJL A 2 185 UNP P19478 TA34_TREPA 21 204 DBREF 3PJL B 2 185 UNP P19478 TA34_TREPA 21 204 SEQADV 3PJL MET A -26 UNP P19478 EXPRESSION TAG SEQADV 3PJL SER A -25 UNP P19478 EXPRESSION TAG SEQADV 3PJL TYR A -24 UNP P19478 EXPRESSION TAG SEQADV 3PJL TYR A -23 UNP P19478 EXPRESSION TAG SEQADV 3PJL HIS A -22 UNP P19478 EXPRESSION TAG SEQADV 3PJL HIS A -21 UNP P19478 EXPRESSION TAG SEQADV 3PJL HIS A -20 UNP P19478 EXPRESSION TAG SEQADV 3PJL HIS A -19 UNP P19478 EXPRESSION TAG SEQADV 3PJL HIS A -18 UNP P19478 EXPRESSION TAG SEQADV 3PJL HIS A -17 UNP P19478 EXPRESSION TAG SEQADV 3PJL ASP A -16 UNP P19478 EXPRESSION TAG SEQADV 3PJL TYR A -15 UNP P19478 EXPRESSION TAG SEQADV 3PJL ASP A -14 UNP P19478 EXPRESSION TAG SEQADV 3PJL ILE A -13 UNP P19478 EXPRESSION TAG SEQADV 3PJL PRO A -12 UNP P19478 EXPRESSION TAG SEQADV 3PJL THR A -11 UNP P19478 EXPRESSION TAG SEQADV 3PJL THR A -10 UNP P19478 EXPRESSION TAG SEQADV 3PJL GLU A -9 UNP P19478 EXPRESSION TAG SEQADV 3PJL ASN A -8 UNP P19478 EXPRESSION TAG SEQADV 3PJL LEU A -7 UNP P19478 EXPRESSION TAG SEQADV 3PJL TYR A -6 UNP P19478 EXPRESSION TAG SEQADV 3PJL PHE A -5 UNP P19478 EXPRESSION TAG SEQADV 3PJL GLN A -4 UNP P19478 EXPRESSION TAG SEQADV 3PJL GLY A -3 UNP P19478 EXPRESSION TAG SEQADV 3PJL ALA A -2 UNP P19478 EXPRESSION TAG SEQADV 3PJL MET A -1 UNP P19478 EXPRESSION TAG SEQADV 3PJL GLY A 0 UNP P19478 EXPRESSION TAG SEQADV 3PJL SER A 1 UNP P19478 EXPRESSION TAG SEQADV 3PJL MET B -26 UNP P19478 EXPRESSION TAG SEQADV 3PJL SER B -25 UNP P19478 EXPRESSION TAG SEQADV 3PJL TYR B -24 UNP P19478 EXPRESSION TAG SEQADV 3PJL TYR B -23 UNP P19478 EXPRESSION TAG SEQADV 3PJL HIS B -22 UNP P19478 EXPRESSION TAG SEQADV 3PJL HIS B -21 UNP P19478 EXPRESSION TAG SEQADV 3PJL HIS B -20 UNP P19478 EXPRESSION TAG SEQADV 3PJL HIS B -19 UNP P19478 EXPRESSION TAG SEQADV 3PJL HIS B -18 UNP P19478 EXPRESSION TAG SEQADV 3PJL HIS B -17 UNP P19478 EXPRESSION TAG SEQADV 3PJL ASP B -16 UNP P19478 EXPRESSION TAG SEQADV 3PJL TYR B -15 UNP P19478 EXPRESSION TAG SEQADV 3PJL ASP B -14 UNP P19478 EXPRESSION TAG SEQADV 3PJL ILE B -13 UNP P19478 EXPRESSION TAG SEQADV 3PJL PRO B -12 UNP P19478 EXPRESSION TAG SEQADV 3PJL THR B -11 UNP P19478 EXPRESSION TAG SEQADV 3PJL THR B -10 UNP P19478 EXPRESSION TAG SEQADV 3PJL GLU B -9 UNP P19478 EXPRESSION TAG SEQADV 3PJL ASN B -8 UNP P19478 EXPRESSION TAG SEQADV 3PJL LEU B -7 UNP P19478 EXPRESSION TAG SEQADV 3PJL TYR B -6 UNP P19478 EXPRESSION TAG SEQADV 3PJL PHE B -5 UNP P19478 EXPRESSION TAG SEQADV 3PJL GLN B -4 UNP P19478 EXPRESSION TAG SEQADV 3PJL GLY B -3 UNP P19478 EXPRESSION TAG SEQADV 3PJL ALA B -2 UNP P19478 EXPRESSION TAG SEQADV 3PJL MET B -1 UNP P19478 EXPRESSION TAG SEQADV 3PJL GLY B 0 UNP P19478 EXPRESSION TAG SEQADV 3PJL SER B 1 UNP P19478 EXPRESSION TAG SEQRES 1 A 212 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 A 212 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA MET SEQRES 3 A 212 GLY SER GLY GLY GLY GLY GLU HIS GLN HIS GLY GLU GLU SEQRES 4 A 212 MET MET ALA ALA VAL PRO ALA PRO ASP ALA GLU GLY ALA SEQRES 5 A 212 ALA GLY PHE ASP GLU PHE PRO ILE GLY GLU ASP ARG ASP SEQRES 6 A 212 VAL GLY PRO LEU HIS VAL GLY GLY VAL TYR PHE GLN PRO SEQRES 7 A 212 VAL GLU MET HIS PRO ALA PRO GLY ALA GLN PRO SER LYS SEQRES 8 A 212 GLU GLU ALA ASP CYS HIS ILE GLU ALA ASP ILE HIS ALA SEQRES 9 A 212 ASN GLU ALA GLY LYS ASP LEU GLY TYR GLY VAL GLY ASP SEQRES 10 A 212 PHE VAL PRO TYR LEU ARG VAL VAL ALA PHE LEU GLN LYS SEQRES 11 A 212 HIS GLY SER GLU LYS VAL GLN LYS VAL MET PHE ALA PRO SEQRES 12 A 212 MET ASN ALA GLY ASP GLY PRO HIS TYR GLY ALA ASN VAL SEQRES 13 A 212 LYS PHE GLU GLU GLY LEU GLY THR TYR LYS VAL ARG PHE SEQRES 14 A 212 GLU ILE ALA ALA PRO SER HIS ASP GLU TYR SER LEU HIS SEQRES 15 A 212 ILE ASP GLU GLN THR GLY VAL SER GLY ARG PHE TRP SER SEQRES 16 A 212 GLU PRO LEU VAL ALA GLU TRP ASP ASP PHE GLU TRP LYS SEQRES 17 A 212 GLY PRO GLN TRP SEQRES 1 B 212 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 B 212 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA MET SEQRES 3 B 212 GLY SER GLY GLY GLY GLY GLU HIS GLN HIS GLY GLU GLU SEQRES 4 B 212 MET MET ALA ALA VAL PRO ALA PRO ASP ALA GLU GLY ALA SEQRES 5 B 212 ALA GLY PHE ASP GLU PHE PRO ILE GLY GLU ASP ARG ASP SEQRES 6 B 212 VAL GLY PRO LEU HIS VAL GLY GLY VAL TYR PHE GLN PRO SEQRES 7 B 212 VAL GLU MET HIS PRO ALA PRO GLY ALA GLN PRO SER LYS SEQRES 8 B 212 GLU GLU ALA ASP CYS HIS ILE GLU ALA ASP ILE HIS ALA SEQRES 9 B 212 ASN GLU ALA GLY LYS ASP LEU GLY TYR GLY VAL GLY ASP SEQRES 10 B 212 PHE VAL PRO TYR LEU ARG VAL VAL ALA PHE LEU GLN LYS SEQRES 11 B 212 HIS GLY SER GLU LYS VAL GLN LYS VAL MET PHE ALA PRO SEQRES 12 B 212 MET ASN ALA GLY ASP GLY PRO HIS TYR GLY ALA ASN VAL SEQRES 13 B 212 LYS PHE GLU GLU GLY LEU GLY THR TYR LYS VAL ARG PHE SEQRES 14 B 212 GLU ILE ALA ALA PRO SER HIS ASP GLU TYR SER LEU HIS SEQRES 15 B 212 ILE ASP GLU GLN THR GLY VAL SER GLY ARG PHE TRP SER SEQRES 16 B 212 GLU PRO LEU VAL ALA GLU TRP ASP ASP PHE GLU TRP LYS SEQRES 17 B 212 GLY PRO GLN TRP HET CO A 186 1 HET CO A 187 1 HET SO4 A 501 5 HET SO4 A 503 5 HET EDO A 188 4 HET EDO A 189 4 HET CO B 186 1 HET CO B 187 1 HET CO B 188 1 HET CO B 189 1 HET CO B 190 1 HET SO4 B 502 5 HETNAM CO COBALT (II) ION HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 CO 7(CO 2+) FORMUL 5 SO4 3(O4 S 2-) FORMUL 7 EDO 2(C2 H6 O2) FORMUL 15 HOH *218(H2 O) HELIX 1 1 GLU A 79 GLY A 85 5 7 HELIX 2 2 GLU B 79 GLY B 85 5 7 SHEET 1 A 3 PHE A 31 PRO A 32 0 SHEET 2 A 3 LEU A 42 PHE A 49 -1 O TYR A 48 N PHE A 31 SHEET 3 A 3 ARG A 37 VAL A 39 -1 N ARG A 37 O VAL A 44 SHEET 1 B 7 PHE A 31 PRO A 32 0 SHEET 2 B 7 LEU A 42 PHE A 49 -1 O TYR A 48 N PHE A 31 SHEET 3 B 7 CYS A 69 ALA A 77 -1 O HIS A 76 N HIS A 43 SHEET 4 B 7 GLY A 122 VAL A 129 -1 O TYR A 125 N ALA A 73 SHEET 5 B 7 ALA A 115 ALA A 119 -1 N ALA A 115 O GLY A 126 SHEET 6 B 7 SER B 153 HIS B 155 1 O HIS B 155 N ASN A 118 SHEET 7 B 7 MET A 54 HIS A 55 -1 N HIS A 55 O LEU B 154 SHEET 1 C 4 GLN A 110 MET A 113 0 SHEET 2 C 4 ARG A 96 LYS A 103 -1 N ALA A 99 O VAL A 112 SHEET 3 C 4 GLY A 136 ALA A 145 -1 O ALA A 145 N ARG A 96 SHEET 4 C 4 LEU A 171 TRP A 180 -1 O ALA A 173 N PHE A 142 SHEET 1 D 3 PHE B 31 PRO B 32 0 SHEET 2 D 3 LEU B 42 PHE B 49 -1 O TYR B 48 N PHE B 31 SHEET 3 D 3 ARG B 37 VAL B 39 -1 N ARG B 37 O VAL B 44 SHEET 1 E 7 PHE B 31 PRO B 32 0 SHEET 2 E 7 LEU B 42 PHE B 49 -1 O TYR B 48 N PHE B 31 SHEET 3 E 7 CYS B 69 ALA B 77 -1 O HIS B 76 N HIS B 43 SHEET 4 E 7 GLY B 122 VAL B 129 -1 O ALA B 127 N ILE B 71 SHEET 5 E 7 ALA B 115 ALA B 119 -1 N ALA B 115 O GLY B 126 SHEET 6 E 7 SER A 153 HIS A 155 1 N HIS A 155 O ASN B 118 SHEET 7 E 7 MET B 54 HIS B 55 -1 O HIS B 55 N LEU A 154 SHEET 1 F 4 GLN B 110 MET B 113 0 SHEET 2 F 4 ARG B 96 LYS B 103 -1 N ALA B 99 O VAL B 112 SHEET 3 F 4 GLY B 136 ALA B 145 -1 O ALA B 145 N ARG B 96 SHEET 4 F 4 LEU B 171 TRP B 180 -1 O ALA B 173 N PHE B 142 LINK NE2BHIS B 124 CO CO B 186 1555 1555 1.87 LINK NE2 HIS B 149 CO CO A 187 1555 1555 1.96 LINK CO CO A 187 O HOH A 304 1555 1555 2.02 LINK NE2 HIS B 155 CO CO A 186 1555 1555 2.09 LINK CO CO A 187 O HOH A 305 1555 1555 2.09 LINK NE2 HIS A 124 CO CO A 186 1555 1555 2.13 LINK NE2 HIS A 70 CO CO A 186 1555 1555 2.17 LINK CO CO B 188 O HOH A 192 1555 1555 2.18 LINK NE2 HIS A 155 CO CO B 186 1555 1555 2.20 LINK CO CO B 188 O HOH B 236 1555 1555 2.20 LINK NE2 HIS B 70 CO CO B 186 1555 1555 2.25 LINK OD2 ASP B 38 CO CO B 187 1555 1555 2.27 LINK OE2 GLU A 72 CO CO A 186 1555 1555 2.27 LINK OD1 ASP B 74 CO CO B 190 1555 1555 2.32 LINK NE2BHIS B 43 CO CO B 189 1555 1555 2.36 LINK OE1 GLU A 72 CO CO A 186 1555 1555 2.40 LINK OD2 ASP B 36 CO CO B 189 1555 1555 2.41 LINK NE2 HIS A 55 CO CO A 187 1555 1555 2.44 LINK NE2AHIS B 124 CO CO B 190 1555 1555 2.52 LINK CO CO B 190 O HOH B 257 1555 1555 2.53 LINK OD1 ASP B 38 CO CO B 187 1555 1555 2.54 LINK ND1BHIS B 43 CO CO B 187 1555 1555 2.59 LINK NE2AHIS B 43 CO CO B 189 1555 1555 2.60 LINK NE2 HIS B 55 CO CO B 188 1555 1555 2.69 CISPEP 1 HIS A 55 PRO A 56 0 -11.06 CISPEP 2 HIS B 55 PRO B 56 0 -5.64 SITE 1 AC1 5 HIS A 70 GLU A 72 MET A 117 HIS A 124 SITE 2 AC1 5 HIS B 155 SITE 1 AC2 4 HIS A 55 HOH A 304 HOH A 305 HIS B 149 SITE 1 AC3 9 ARG A 165 TRP A 167 SER A 168 GLU A 169 SITE 2 AC3 9 HOH A 200 HOH A 263 HOH A 314 HOH A 319 SITE 3 AC3 9 HOH B 199 SITE 1 AC4 4 ARG A 96 SER A 148 HIS A 149 HOH A 303 SITE 1 AC5 7 PHE A 31 PRO A 32 TYR A 48 ASP A 68 SITE 2 AC5 7 LYS A 130 LYS A 181 HOH A 195 SITE 1 AC6 4 ASP A 29 GLU A 30 GLN B 159 THR B 160 SITE 1 AC7 5 HIS A 155 HIS B 70 GLU B 72 MET B 117 SITE 2 AC7 5 HIS B 124 SITE 1 AC8 2 ASP B 38 HIS B 43 SITE 1 AC9 4 HOH A 192 HIS B 55 HOH B 203 HOH B 236 SITE 1 BC1 2 ASP B 36 HIS B 43 SITE 1 BC2 3 ASP B 74 HIS B 124 HOH B 257 SITE 1 BC3 5 GLU B 35 ARG B 37 TRP B 175 HOH B 262 SITE 2 BC3 5 HOH B 263 CRYST1 34.406 65.984 152.374 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029065 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015155 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006563 0.00000 MASTER 490 0 12 2 28 0 18 6 0 0 0 34 END