HEADER ELECTRON TRANSPORT 22-JUL-10 3O20 TITLE ELECTRON TRANSFER COMPLEXES:EXPERIMENTAL MAPPING OF THE REDOX- TITLE 2 DEPENDENT CYTOCHROME C ELECTROSTATIC SURFACE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C; COMPND 3 CHAIN: A, B, C SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EQUUS CABALLUS; SOURCE 3 ORGANISM_COMMON: DOMESTIC HORSE,EQUINE; SOURCE 4 ORGANISM_TAXID: 9796 KEYWDS GLOBULAR PROTEIN, ELECTRON CARRIER, MITOCHONDRIAL RESPIRATION, KEYWDS 2 ELECTRON TRASPORT CHAIN, ELECTRON TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR M.DE MARCH,R.DE ZORZI,A.CASINI,L.MESSORI,S.GEREMIA,N.DEMITRI, AUTHOR 2 C.GABBIANI,A.GUERRI REVDAT 3 20-MAR-19 3O20 1 JRNL LINK REVDAT 2 07-MAR-18 3O20 1 REMARK REVDAT 1 25-JAN-12 3O20 0 JRNL AUTH M.DE MARCH,N.DEMITRI,R.DE ZORZI,A.CASINI,C.GABBIANI, JRNL AUTH 2 A.GUERRI,L.MESSORI,S.GEREMIA JRNL TITL NITRATE AS A PROBE OF CYTOCHROME C SURFACE: CRYSTALLOGRAPHIC JRNL TITL 2 IDENTIFICATION OF CRUCIAL "HOT SPOTS" FOR PROTEIN-PROTEIN JRNL TITL 3 RECOGNITION. JRNL REF J. INORG. BIOCHEM. V. 135 58 2014 JRNL REFN ISSN 1873-3344 JRNL PMID 24662464 JRNL DOI 10.1016/J.JINORGBIO.2014.02.015 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH E.SCHAFER,N.A.DENCHER,J.VONCK,D.N.PARCEJ REMARK 1 TITL THREE-DIMENSIONAL STRUCTURE OF THE RESPIRATORY CHAIN REMARK 1 TITL 2 SUPERCOMPLEX I1III2IV1 FROM BOVINE HEART MITOCHONDRIA. REMARK 1 REF BIOCHEMISTRY V. 46 12579 2007 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 17927210 REMARK 1 DOI 10.1021/BI700983H REMARK 1 REFERENCE 2 REMARK 1 AUTH J.HEINEMEYER,H.P.BRAUN,E.J.BOEKEMA,R.KOURIL REMARK 1 TITL A STRUCTURAL MODEL OF THE CYTOCHROME C REDUCTASE/OXIDASE REMARK 1 TITL 2 SUPERCOMPLEX FROM YEAST MITOCHONDRIA. REMARK 1 REF J. BIOL. CHEM. V. 282 12240 2007 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 17322303 REMARK 1 DOI 10.1074/JBC.M610545200 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.09 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 21667 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1166 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1311 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 77.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2280 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.3030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2478 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 201 REMARK 3 SOLVENT ATOMS : 365 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26000 REMARK 3 B22 (A**2) : -1.31000 REMARK 3 B33 (A**2) : 2.53000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.36000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.204 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.146 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.879 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.863 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2748 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3682 ; 1.794 ; 2.140 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 311 ; 6.279 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 102 ;34.061 ;25.294 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 517 ;16.915 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;26.403 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 352 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2038 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1503 ; 0.207 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1763 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 292 ; 0.215 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 101 ; 0.247 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 59 ; 0.268 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1665 ; 1.085 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2478 ; 1.471 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1296 ; 2.379 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1197 ; 3.302 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 16 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 7 1 REMARK 3 1 B 1 B 7 1 REMARK 3 1 C 1 C 7 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 50 ; 0.08 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 50 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 C (A): 50 ; 0.08 ; 0.05 REMARK 3 TIGHT THERMAL 1 A (A**2): 50 ; 0.19 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 50 ; 0.21 ; 0.50 REMARK 3 TIGHT THERMAL 1 C (A**2): 50 ; 0.25 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 8 A 8 3 REMARK 3 1 B 8 B 8 3 REMARK 3 1 C 8 C 8 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 A (A): 3 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 B (A): 3 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 C (A): 3 ; 0.01 ; 0.05 REMARK 3 TIGHT THERMAL 2 A (A**2): 3 ; 0.13 ; 0.50 REMARK 3 TIGHT THERMAL 2 B (A**2): 3 ; 0.45 ; 0.50 REMARK 3 TIGHT THERMAL 2 C (A**2): 3 ; 0.39 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 9 A 11 1 REMARK 3 1 B 9 B 11 1 REMARK 3 1 C 9 C 11 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 3 A (A): 26 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 3 B (A): 26 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 3 C (A): 26 ; 0.05 ; 0.05 REMARK 3 TIGHT THERMAL 3 A (A**2): 26 ; 0.39 ; 0.50 REMARK 3 TIGHT THERMAL 3 B (A**2): 26 ; 0.31 ; 0.50 REMARK 3 TIGHT THERMAL 3 C (A**2): 26 ; 0.43 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 4 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 12 A 12 3 REMARK 3 1 B 12 B 12 3 REMARK 3 1 C 12 C 12 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 4 A (A): 4 ; 0.02 ; 0.05 REMARK 3 TIGHT POSITIONAL 4 B (A): 4 ; 0.02 ; 0.05 REMARK 3 TIGHT POSITIONAL 4 C (A): 4 ; 0.02 ; 0.05 REMARK 3 LOOSE POSITIONAL 4 A (A): 5 ; 1.61 ; 5.00 REMARK 3 LOOSE POSITIONAL 4 B (A): 5 ; 2.52 ; 5.00 REMARK 3 LOOSE POSITIONAL 4 C (A): 5 ; 1.70 ; 5.00 REMARK 3 TIGHT THERMAL 4 A (A**2): 4 ; 0.16 ; 0.50 REMARK 3 TIGHT THERMAL 4 B (A**2): 4 ; 0.22 ; 0.50 REMARK 3 TIGHT THERMAL 4 C (A**2): 4 ; 0.11 ; 0.50 REMARK 3 LOOSE THERMAL 4 A (A**2): 5 ; 2.76 ; 10.00 REMARK 3 LOOSE THERMAL 4 B (A**2): 5 ; 4.21 ; 10.00 REMARK 3 LOOSE THERMAL 4 C (A**2): 5 ; 2.13 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 5 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 13 A 15 1 REMARK 3 1 B 13 B 15 1 REMARK 3 1 C 13 C 15 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 5 A (A): 20 ; 0.07 ; 0.05 REMARK 3 TIGHT POSITIONAL 5 B (A): 20 ; 0.07 ; 0.05 REMARK 3 TIGHT POSITIONAL 5 C (A): 20 ; 0.07 ; 0.05 REMARK 3 TIGHT THERMAL 5 A (A**2): 20 ; 0.35 ; 0.50 REMARK 3 TIGHT THERMAL 5 B (A**2): 20 ; 0.21 ; 0.50 REMARK 3 TIGHT THERMAL 5 C (A**2): 20 ; 0.46 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 6 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 16 A 16 3 REMARK 3 1 B 16 B 16 3 REMARK 3 1 C 16 C 16 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 6 A (A): 4 ; 0.04 ; 0.05 REMARK 3 TIGHT POSITIONAL 6 B (A): 4 ; 0.04 ; 0.05 REMARK 3 TIGHT POSITIONAL 6 C (A): 4 ; 0.02 ; 0.05 REMARK 3 LOOSE POSITIONAL 6 A (A): 5 ; 0.64 ; 5.00 REMARK 3 LOOSE POSITIONAL 6 B (A): 5 ; 1.36 ; 5.00 REMARK 3 LOOSE POSITIONAL 6 C (A): 5 ; 0.74 ; 5.00 REMARK 3 TIGHT THERMAL 6 A (A**2): 4 ; 0.35 ; 0.50 REMARK 3 TIGHT THERMAL 6 B (A**2): 4 ; 0.40 ; 0.50 REMARK 3 TIGHT THERMAL 6 C (A**2): 4 ; 0.13 ; 0.50 REMARK 3 LOOSE THERMAL 6 A (A**2): 5 ; 1.46 ; 10.00 REMARK 3 LOOSE THERMAL 6 B (A**2): 5 ; 1.20 ; 10.00 REMARK 3 LOOSE THERMAL 6 C (A**2): 5 ; 2.27 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 7 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 17 A 24 1 REMARK 3 1 B 17 B 24 1 REMARK 3 1 C 17 C 24 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 7 A (A): 56 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 7 B (A): 56 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 7 C (A): 56 ; 0.05 ; 0.05 REMARK 3 TIGHT THERMAL 7 A (A**2): 56 ; 0.22 ; 0.50 REMARK 3 TIGHT THERMAL 7 B (A**2): 56 ; 0.25 ; 0.50 REMARK 3 TIGHT THERMAL 7 C (A**2): 56 ; 0.24 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 8 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 25 A 25 3 REMARK 3 1 B 25 B 25 3 REMARK 3 1 C 25 C 25 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 8 A (A): 4 ; 0.02 ; 0.05 REMARK 3 TIGHT POSITIONAL 8 B (A): 4 ; 0.02 ; 0.05 REMARK 3 TIGHT POSITIONAL 8 C (A): 4 ; 0.02 ; 0.05 REMARK 3 LOOSE POSITIONAL 8 A (A): 5 ; 1.15 ; 5.00 REMARK 3 LOOSE POSITIONAL 8 B (A): 5 ; 1.21 ; 5.00 REMARK 3 LOOSE POSITIONAL 8 C (A): 5 ; 1.92 ; 5.00 REMARK 3 TIGHT THERMAL 8 A (A**2): 4 ; 0.19 ; 0.50 REMARK 3 TIGHT THERMAL 8 B (A**2): 4 ; 0.17 ; 0.50 REMARK 3 TIGHT THERMAL 8 C (A**2): 4 ; 0.23 ; 0.50 REMARK 3 LOOSE THERMAL 8 A (A**2): 5 ; 2.31 ; 10.00 REMARK 3 LOOSE THERMAL 8 B (A**2): 5 ; 2.93 ; 10.00 REMARK 3 LOOSE THERMAL 8 C (A**2): 5 ; 1.70 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 9 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 26 A 68 1 REMARK 3 1 B 26 B 68 1 REMARK 3 1 C 26 C 68 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 9 A (A): 342 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 9 B (A): 342 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 9 C (A): 342 ; 0.06 ; 0.05 REMARK 3 TIGHT THERMAL 9 A (A**2): 342 ; 0.25 ; 0.50 REMARK 3 TIGHT THERMAL 9 B (A**2): 342 ; 0.26 ; 0.50 REMARK 3 TIGHT THERMAL 9 C (A**2): 342 ; 0.31 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 10 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 69 A 69 3 REMARK 3 1 B 69 B 69 3 REMARK 3 1 C 69 C 69 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 10 A (A): 4 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 10 B (A): 4 ; 0.03 ; 0.05 REMARK 3 TIGHT POSITIONAL 10 C (A): 4 ; 0.02 ; 0.05 REMARK 3 LOOSE POSITIONAL 10 A (A): 5 ; 0.99 ; 5.00 REMARK 3 LOOSE POSITIONAL 10 B (A): 5 ; 0.48 ; 5.00 REMARK 3 LOOSE POSITIONAL 10 C (A): 5 ; 0.53 ; 5.00 REMARK 3 TIGHT THERMAL 10 A (A**2): 4 ; 0.19 ; 0.50 REMARK 3 TIGHT THERMAL 10 B (A**2): 4 ; 0.21 ; 0.50 REMARK 3 TIGHT THERMAL 10 C (A**2): 4 ; 0.11 ; 0.50 REMARK 3 LOOSE THERMAL 10 A (A**2): 5 ; 3.94 ; 10.00 REMARK 3 LOOSE THERMAL 10 B (A**2): 5 ; 5.78 ; 10.00 REMARK 3 LOOSE THERMAL 10 C (A**2): 5 ; 1.90 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 11 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 70 A 85 1 REMARK 3 1 B 70 B 85 1 REMARK 3 1 C 70 C 85 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 11 A (A): 124 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 11 B (A): 124 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 11 C (A): 124 ; 0.06 ; 0.05 REMARK 3 TIGHT THERMAL 11 A (A**2): 124 ; 0.28 ; 0.50 REMARK 3 TIGHT THERMAL 11 B (A**2): 124 ; 0.28 ; 0.50 REMARK 3 TIGHT THERMAL 11 C (A**2): 124 ; 0.36 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 12 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 86 A 88 3 REMARK 3 1 B 86 B 88 3 REMARK 3 1 C 86 C 88 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 12 A (A): 12 ; 0.04 ; 0.05 REMARK 3 TIGHT POSITIONAL 12 B (A): 12 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 12 C (A): 12 ; 0.05 ; 0.05 REMARK 3 LOOSE POSITIONAL 12 A (A): 15 ; 0.42 ; 5.00 REMARK 3 LOOSE POSITIONAL 12 B (A): 15 ; 0.54 ; 5.00 REMARK 3 LOOSE POSITIONAL 12 C (A): 15 ; 0.43 ; 5.00 REMARK 3 TIGHT THERMAL 12 A (A**2): 12 ; 0.21 ; 0.50 REMARK 3 TIGHT THERMAL 12 B (A**2): 12 ; 0.26 ; 0.50 REMARK 3 TIGHT THERMAL 12 C (A**2): 12 ; 0.25 ; 0.50 REMARK 3 LOOSE THERMAL 12 A (A**2): 15 ; 2.41 ; 10.00 REMARK 3 LOOSE THERMAL 12 B (A**2): 15 ; 3.66 ; 10.00 REMARK 3 LOOSE THERMAL 12 C (A**2): 15 ; 2.75 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 13 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 89 A 99 1 REMARK 3 1 B 89 B 99 1 REMARK 3 1 C 89 C 99 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 13 A (A): 94 ; 0.07 ; 0.05 REMARK 3 TIGHT POSITIONAL 13 B (A): 94 ; 0.07 ; 0.05 REMARK 3 TIGHT POSITIONAL 13 C (A): 94 ; 0.07 ; 0.05 REMARK 3 TIGHT THERMAL 13 A (A**2): 94 ; 0.27 ; 0.50 REMARK 3 TIGHT THERMAL 13 B (A**2): 94 ; 0.26 ; 0.50 REMARK 3 TIGHT THERMAL 13 C (A**2): 94 ; 0.28 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 14 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 100 A 100 3 REMARK 3 1 B 100 B 100 3 REMARK 3 1 C 100 C 100 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 14 A (A): 4 ; 0.03 ; 0.05 REMARK 3 TIGHT POSITIONAL 14 B (A): 4 ; 0.03 ; 0.05 REMARK 3 TIGHT POSITIONAL 14 C (A): 4 ; 0.01 ; 0.05 REMARK 3 LOOSE POSITIONAL 14 A (A): 5 ; 1.24 ; 5.00 REMARK 3 LOOSE POSITIONAL 14 B (A): 5 ; 0.65 ; 5.00 REMARK 3 LOOSE POSITIONAL 14 C (A): 5 ; 0.84 ; 5.00 REMARK 3 TIGHT THERMAL 14 A (A**2): 4 ; 0.35 ; 0.50 REMARK 3 TIGHT THERMAL 14 B (A**2): 4 ; 0.21 ; 0.50 REMARK 3 TIGHT THERMAL 14 C (A**2): 4 ; 0.47 ; 0.50 REMARK 3 LOOSE THERMAL 14 A (A**2): 5 ; 1.49 ; 10.00 REMARK 3 LOOSE THERMAL 14 B (A**2): 5 ; 0.50 ; 10.00 REMARK 3 LOOSE THERMAL 14 C (A**2): 5 ; 1.84 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 15 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 101 A 102 1 REMARK 3 1 B 101 B 102 1 REMARK 3 1 C 101 C 102 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 15 A (A): 12 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 15 B (A): 12 ; 0.04 ; 0.05 REMARK 3 TIGHT POSITIONAL 15 C (A): 12 ; 0.04 ; 0.05 REMARK 3 TIGHT THERMAL 15 A (A**2): 12 ; 0.19 ; 0.50 REMARK 3 TIGHT THERMAL 15 B (A**2): 12 ; 0.30 ; 0.50 REMARK 3 TIGHT THERMAL 15 C (A**2): 12 ; 0.23 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 16 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 103 A 104 3 REMARK 3 1 B 103 B 104 3 REMARK 3 1 C 103 C 104 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 16 A (A): 8 ; 0.08 ; 0.05 REMARK 3 TIGHT POSITIONAL 16 B (A): 8 ; 0.07 ; 0.05 REMARK 3 TIGHT POSITIONAL 16 C (A): 8 ; 0.04 ; 0.05 REMARK 3 LOOSE POSITIONAL 16 A (A): 10 ; 0.61 ; 5.00 REMARK 3 LOOSE POSITIONAL 16 B (A): 10 ; 0.42 ; 5.00 REMARK 3 LOOSE POSITIONAL 16 C (A): 10 ; 0.42 ; 5.00 REMARK 3 TIGHT THERMAL 16 A (A**2): 8 ; 0.12 ; 0.50 REMARK 3 TIGHT THERMAL 16 B (A**2): 8 ; 0.14 ; 0.50 REMARK 3 TIGHT THERMAL 16 C (A**2): 8 ; 0.10 ; 0.50 REMARK 3 LOOSE THERMAL 16 A (A**2): 10 ; 2.40 ; 10.00 REMARK 3 LOOSE THERMAL 16 B (A**2): 10 ; 0.86 ; 10.00 REMARK 3 LOOSE THERMAL 16 C (A**2): 10 ; 2.72 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3O20 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000060564. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : OXFORD DIFFRACTION ENHANCE ULTRA REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21667 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 65.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1HRC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: EXCESS OF NANO3 AND 10% OF DITIONITE, REMARK 280 PH 7.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 45.04600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.01450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 45.04600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 26.01450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 69 O HOH A 185 2.07 REMARK 500 O HOH B 359 O HOH C 123 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 135 O HOH B 355 2555 2.08 REMARK 500 O HOH A 121 O HOH C 325 2655 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 27 -125.02 -112.65 REMARK 500 ASN A 70 77.80 -170.66 REMARK 500 PHE A 82 118.03 -171.90 REMARK 500 LYS B 27 -120.49 -112.34 REMARK 500 ASN B 70 79.56 -169.58 REMARK 500 LYS C 27 -121.90 -99.49 REMARK 500 ASN C 70 80.76 -173.71 REMARK 500 PHE C 82 121.25 -173.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC B 105 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 18 NE2 REMARK 620 2 HEC B 105 NA 90.7 REMARK 620 3 HEC B 105 NB 93.8 89.9 REMARK 620 4 HEC B 105 NC 90.1 179.1 89.7 REMARK 620 5 HEC B 105 ND 89.3 89.3 176.8 91.1 REMARK 620 6 MET B 80 SD 172.4 84.8 92.3 94.5 84.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC C 105 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 18 NE2 REMARK 620 2 HEC C 105 NA 83.3 REMARK 620 3 HEC C 105 NB 88.3 88.4 REMARK 620 4 HEC C 105 NC 90.8 174.1 91.0 REMARK 620 5 HEC C 105 ND 84.6 87.1 172.0 92.7 REMARK 620 6 MET C 80 SD 170.2 87.4 94.7 98.5 91.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 105 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 18 NE2 REMARK 620 2 HEC A 105 NA 86.6 REMARK 620 3 HEC A 105 NB 91.5 90.8 REMARK 620 4 HEC A 105 NC 86.2 172.2 86.3 REMARK 620 5 HEC A 105 ND 83.0 85.8 173.7 96.3 REMARK 620 6 MET A 80 SD 173.4 87.3 91.1 100.0 94.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 107 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 108 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 109 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 110 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 111 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 112 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC B 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 107 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 108 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 109 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 110 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 111 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 112 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 113 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC C 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 C 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 C 107 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 C 108 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1KYO RELATED DB: PDB REMARK 900 YEAST CYTOCHROME BC1 COMPLEX WITH BOUND SUBSTRATE CYTOCHROME C REMARK 900 RELATED ID: 2PCC RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A COMPLEX BETWEEN ELECTRON TRANSFER PARTNERS, REMARK 900 CYTOCHROME C PEROXIDASE AND CYTOCHROME C. REMARK 900 RELATED ID: 2PCB RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A COMPLEX BETWEEN ELECTRON TRANSFER PARTNERS, REMARK 900 CYTOCHROME C PEROXIDASE AND CYTOCHROME C. REMARK 900 RELATED ID: 1L9J RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE CYTOCHROME-C(2)-PHOTOSYNTHETIC REACTION REMARK 900 CENTER ELECTRON TRANSFER COMPLEX FROM RHODOBACTER SPHAEROIDES IN REMARK 900 TYPE I CO-CRYSTALS DBREF 3O20 A 1 104 UNP P00004 CYC_HORSE 2 105 DBREF 3O20 B 1 104 UNP P00004 CYC_HORSE 2 105 DBREF 3O20 C 1 104 UNP P00004 CYC_HORSE 2 105 SEQADV 3O20 ACE A 0 UNP P00004 ACETYLATION SEQADV 3O20 ACE B 0 UNP P00004 ACETYLATION SEQADV 3O20 ACE C 0 UNP P00004 ACETYLATION SEQRES 1 A 105 ACE GLY ASP VAL GLU LYS GLY LYS LYS ILE PHE VAL GLN SEQRES 2 A 105 LYS CYS ALA GLN CYS HIS THR VAL GLU LYS GLY GLY LYS SEQRES 3 A 105 HIS LYS THR GLY PRO ASN LEU HIS GLY LEU PHE GLY ARG SEQRES 4 A 105 LYS THR GLY GLN ALA PRO GLY PHE THR TYR THR ASP ALA SEQRES 5 A 105 ASN LYS ASN LYS GLY ILE THR TRP LYS GLU GLU THR LEU SEQRES 6 A 105 MET GLU TYR LEU GLU ASN PRO LYS LYS TYR ILE PRO GLY SEQRES 7 A 105 THR LYS MET ILE PHE ALA GLY ILE LYS LYS LYS THR GLU SEQRES 8 A 105 ARG GLU ASP LEU ILE ALA TYR LEU LYS LYS ALA THR ASN SEQRES 9 A 105 GLU SEQRES 1 B 105 ACE GLY ASP VAL GLU LYS GLY LYS LYS ILE PHE VAL GLN SEQRES 2 B 105 LYS CYS ALA GLN CYS HIS THR VAL GLU LYS GLY GLY LYS SEQRES 3 B 105 HIS LYS THR GLY PRO ASN LEU HIS GLY LEU PHE GLY ARG SEQRES 4 B 105 LYS THR GLY GLN ALA PRO GLY PHE THR TYR THR ASP ALA SEQRES 5 B 105 ASN LYS ASN LYS GLY ILE THR TRP LYS GLU GLU THR LEU SEQRES 6 B 105 MET GLU TYR LEU GLU ASN PRO LYS LYS TYR ILE PRO GLY SEQRES 7 B 105 THR LYS MET ILE PHE ALA GLY ILE LYS LYS LYS THR GLU SEQRES 8 B 105 ARG GLU ASP LEU ILE ALA TYR LEU LYS LYS ALA THR ASN SEQRES 9 B 105 GLU SEQRES 1 C 105 ACE GLY ASP VAL GLU LYS GLY LYS LYS ILE PHE VAL GLN SEQRES 2 C 105 LYS CYS ALA GLN CYS HIS THR VAL GLU LYS GLY GLY LYS SEQRES 3 C 105 HIS LYS THR GLY PRO ASN LEU HIS GLY LEU PHE GLY ARG SEQRES 4 C 105 LYS THR GLY GLN ALA PRO GLY PHE THR TYR THR ASP ALA SEQRES 5 C 105 ASN LYS ASN LYS GLY ILE THR TRP LYS GLU GLU THR LEU SEQRES 6 C 105 MET GLU TYR LEU GLU ASN PRO LYS LYS TYR ILE PRO GLY SEQRES 7 C 105 THR LYS MET ILE PHE ALA GLY ILE LYS LYS LYS THR GLU SEQRES 8 C 105 ARG GLU ASP LEU ILE ALA TYR LEU LYS LYS ALA THR ASN SEQRES 9 C 105 GLU HET ACE A 0 3 HET ACE B 0 3 HET ACE C 0 3 HET HEC A 105 43 HET NO3 A 106 4 HET NO3 A 107 4 HET NO3 A 108 4 HET NO3 A 109 4 HET NO3 A 110 4 HET NO3 A 111 4 HET NO3 A 112 4 HET HEC B 105 43 HET NO3 B 106 4 HET NO3 B 107 4 HET NO3 B 108 4 HET NO3 B 109 4 HET NO3 B 110 4 HET NO3 B 111 4 HET NO3 B 112 4 HET NO3 B 113 4 HET HEC C 105 43 HET NO3 C 106 4 HET NO3 C 107 4 HET NO3 C 108 4 HETNAM ACE ACETYL GROUP HETNAM HEC HEME C HETNAM NO3 NITRATE ION FORMUL 1 ACE 3(C2 H4 O) FORMUL 4 HEC 3(C34 H34 FE N4 O4) FORMUL 5 NO3 18(N O3 1-) FORMUL 25 HOH *365(H2 O) HELIX 1 1 ASP A 2 CYS A 14 1 13 HELIX 2 2 THR A 49 ASN A 54 1 6 HELIX 3 3 LYS A 60 ASN A 70 1 11 HELIX 4 4 ASN A 70 ILE A 75 1 6 HELIX 5 5 LYS A 87 THR A 102 1 16 HELIX 6 6 ASP B 2 CYS B 14 1 13 HELIX 7 7 THR B 49 ASN B 54 1 6 HELIX 8 8 LYS B 60 ASN B 70 1 11 HELIX 9 9 ASN B 70 ILE B 75 1 6 HELIX 10 10 LYS B 87 THR B 102 1 16 HELIX 11 11 ASP C 2 CYS C 14 1 13 HELIX 12 12 THR C 49 ASN C 54 1 6 HELIX 13 13 LYS C 60 ASN C 70 1 11 HELIX 14 14 ASN C 70 ILE C 75 1 6 HELIX 15 15 LYS C 87 THR C 102 1 16 LINK NE2 HIS B 18 FE HEC B 105 1555 1555 2.00 LINK NE2 HIS C 18 FE HEC C 105 1555 1555 2.04 LINK NE2 HIS A 18 FE HEC A 105 1555 1555 2.05 LINK SD MET C 80 FE HEC C 105 1555 1555 2.28 LINK SD MET A 80 FE HEC A 105 1555 1555 2.36 LINK SD MET B 80 FE HEC B 105 1555 1555 2.36 LINK SG CYS A 14 CAB HEC A 105 1555 1555 1.83 LINK SG CYS B 14 CAB HEC B 105 1555 1555 1.88 LINK SG CYS C 14 CAB HEC C 105 1555 1555 1.84 LINK SG CYS A 17 CAC HEC A 105 1555 1555 1.98 LINK SG CYS B 17 CAC HEC B 105 1555 1555 2.08 LINK SG CYS C 17 CAC HEC C 105 1555 1555 2.06 LINK C ACE A 0 N GLY A 1 1555 1555 1.33 LINK C ACE B 0 N GLY B 1 1555 1555 1.34 LINK C ACE C 0 N GLY C 1 1555 1555 1.34 SITE 1 AC1 24 LYS A 13 CYS A 14 CYS A 17 HIS A 18 SITE 2 AC1 24 THR A 28 GLY A 29 PRO A 30 THR A 40 SITE 3 AC1 24 GLY A 41 TYR A 48 THR A 49 ASN A 52 SITE 4 AC1 24 TRP A 59 LEU A 64 TYR A 67 LEU A 68 SITE 5 AC1 24 THR A 78 LYS A 79 MET A 80 ILE A 81 SITE 6 AC1 24 PHE A 82 LEU A 94 HOH A 131 HOH A 211 SITE 1 AC2 6 VAL A 11 HOH A 141 HOH A 168 PHE C 82 SITE 2 AC2 6 ALA C 83 GLY C 84 SITE 1 AC3 7 PHE A 82 ALA A 83 GLY A 84 HOH A 179 SITE 2 AC3 7 LYS B 8 VAL B 11 GLN B 12 SITE 1 AC4 5 LYS A 13 GLY A 84 LYS A 86 LYS A 87 SITE 2 AC4 5 GLU A 90 SITE 1 AC5 7 THR A 19 VAL A 20 GLU A 21 HOH A 236 SITE 2 AC5 7 THR C 28 ILE C 81 HOH C 124 SITE 1 AC6 7 THR A 28 ILE A 81 HOH A 178 PHE B 10 SITE 2 AC6 7 THR B 19 VAL B 20 GLU B 21 SITE 1 AC7 8 GLY A 77 HOH A 132 HOH A 261 LYS C 39 SITE 2 AC7 8 ILE C 57 THR C 58 LYS C 60 THR C 63 SITE 1 AC8 6 GLY A 45 PHE A 46 THR A 47 HOH A 118 SITE 2 AC8 6 HOH A 180 LYS B 53 SITE 1 AC9 25 LYS B 13 CYS B 14 GLN B 16 CYS B 17 SITE 2 AC9 25 HIS B 18 THR B 28 GLY B 29 PRO B 30 SITE 3 AC9 25 THR B 40 GLY B 41 TYR B 48 THR B 49 SITE 4 AC9 25 ASN B 52 TRP B 59 LEU B 64 TYR B 67 SITE 5 AC9 25 LEU B 68 THR B 78 LYS B 79 MET B 80 SITE 6 AC9 25 ILE B 81 PHE B 82 LEU B 94 HOH B 119 SITE 7 AC9 25 HOH B 135 SITE 1 BC1 7 LYS A 53 HIS B 26 GLY B 45 PHE B 46 SITE 2 BC1 7 THR B 47 HOH B 276 LYS C 25 SITE 1 BC2 5 LYS B 27 THR B 28 NO3 B 111 LYS C 25 SITE 2 BC2 5 LYS C 27 SITE 1 BC3 6 PHE B 82 ALA B 83 GLY B 84 HOH B 147 SITE 2 BC3 6 HOH B 332 VAL C 11 SITE 1 BC4 6 LYS B 13 GLY B 84 ILE B 85 LYS B 86 SITE 2 BC4 6 HOH B 163 LYS C 8 SITE 1 BC5 10 LYS B 39 GLY B 56 ILE B 57 THR B 58 SITE 2 BC5 10 LYS B 60 THR B 63 HOH B 194 HOH B 355 SITE 3 BC5 10 GLY C 77 HOH C 196 SITE 1 BC6 9 LYS A 25 HIS A 26 LYS A 27 THR A 28 SITE 2 BC6 9 HOH A 347 LYS B 25 LYS B 27 NO3 B 107 SITE 3 BC6 9 HOH B 133 SITE 1 BC7 6 LYS A 100 PHE B 36 LYS B 60 GLU B 61 SITE 2 BC7 6 LYS B 99 HOH B 136 SITE 1 BC8 9 LYS A 39 GLY A 56 ILE A 57 THR A 58 SITE 2 BC8 9 LYS A 60 HOH A 142 GLY B 77 HOH B 263 SITE 3 BC8 9 HOH B 354 SITE 1 BC9 26 ALA A 15 LYS C 13 CYS C 14 CYS C 17 SITE 2 BC9 26 HIS C 18 THR C 28 GLY C 29 PRO C 30 SITE 3 BC9 26 THR C 40 GLY C 41 PHE C 46 TYR C 48 SITE 4 BC9 26 THR C 49 ASN C 52 TRP C 59 TYR C 67 SITE 5 BC9 26 LEU C 68 THR C 78 LYS C 79 MET C 80 SITE 6 BC9 26 ILE C 81 PHE C 82 LEU C 98 HOH C 121 SITE 7 BC9 26 HOH C 124 HOH C 136 SITE 1 CC1 4 GLU A 4 LYS A 7 LYS C 72 ALA C 83 SITE 1 CC2 7 THR B 28 ILE B 81 THR C 19 VAL C 20 SITE 2 CC2 7 GLU C 21 HOH C 117 HOH C 318 SITE 1 CC3 7 LYS A 8 HOH A 351 LYS C 13 GLY C 84 SITE 2 CC3 7 ILE C 85 LYS C 86 HOH C 345 CRYST1 90.092 52.029 77.749 90.00 123.07 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011100 0.000000 0.007227 0.00000 SCALE2 0.000000 0.019220 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015348 0.00000 MASTER 745 0 24 15 0 0 58 6 0 0 0 27 END