HEADER OXIDOREDUCTASE 21-JUL-10 3O1A TITLE STRUCTURE OF OXYE (CYP165D3), A CYTOCHROME P450 INVOLVED IN TITLE 2 TEICOPLANIN BIOSYNTHESIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: OXY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: P450 MONOOXYGENASE; COMPND 5 EC: 1.14.14.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACTINOPLANES TEICHOMYCETICUS; SOURCE 3 ORGANISM_TAXID: 1867; SOURCE 4 STRAIN: DSMZ 43866; SOURCE 5 GENE: TCP18, TCP19; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET151/D-TOPO KEYWDS CYTOCHROME P450 FOLD, PHENOLIC COUPLING ENZYME, TCP12 PCP DOMAIN, KEYWDS 2 ANTIBIOTIC BIOSYNTHESIS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.J.CRYLE,I.SCHLICHTING REVDAT 3 02-MAR-11 3O1A 1 JRNL REVDAT 2 05-JAN-11 3O1A 1 JRNL REVDAT 1 03-NOV-10 3O1A 0 JRNL AUTH M.J.CRYLE,J.STAADEN,I.SCHLICHTING JRNL TITL STRUCTURAL CHARACTERIZATION OF CYP165D3, A CYTOCHROME P450 JRNL TITL 2 INVOLVED IN PHENOLIC COUPLING IN TEICOPLANIN BIOSYNTHESIS. JRNL REF ARCH.BIOCHEM.BIOPHYS. V. 507 163 2011 JRNL REFN ISSN 0003-9861 JRNL PMID 20974107 JRNL DOI 10.1016/J.ABB.2010.10.017 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 16371 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 818 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1642 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.3410 REMARK 3 BIN FREE R VALUE SET COUNT : 86 REMARK 3 BIN FREE R VALUE : 0.4250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2979 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 43 REMARK 3 SOLVENT ATOMS : 15 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 77.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 85.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.22000 REMARK 3 B22 (A**2) : -4.22000 REMARK 3 B33 (A**2) : 6.33000 REMARK 3 B12 (A**2) : -2.11000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.308 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.281 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3094 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4216 ; 1.184 ; 2.025 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 382 ; 5.253 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 142 ;30.731 ;22.113 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 506 ;17.882 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;16.563 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 459 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2400 ; 0.005 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1921 ; 0.282 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3089 ; 0.535 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1173 ; 0.838 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1127 ; 1.424 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 109 REMARK 3 ORIGIN FOR THE GROUP (A): 8.0579 28.2306 -5.0455 REMARK 3 T TENSOR REMARK 3 T11: 0.1673 T22: 0.2286 REMARK 3 T33: 0.2653 T12: -0.0382 REMARK 3 T13: -0.1033 T23: -0.0451 REMARK 3 L TENSOR REMARK 3 L11: 3.5601 L22: 2.7571 REMARK 3 L33: 1.5885 L12: -0.3792 REMARK 3 L13: -0.8370 L23: -0.9176 REMARK 3 S TENSOR REMARK 3 S11: 0.0008 S12: 0.2999 S13: 0.3328 REMARK 3 S21: -0.1225 S22: 0.0742 S23: 0.0310 REMARK 3 S31: -0.1461 S32: -0.3389 S33: -0.0750 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 110 A 121 REMARK 3 ORIGIN FOR THE GROUP (A): 6.3609 6.0162 18.6893 REMARK 3 T TENSOR REMARK 3 T11: 0.5586 T22: 1.0145 REMARK 3 T33: 0.1771 T12: 0.1103 REMARK 3 T13: 0.0123 T23: 0.2243 REMARK 3 L TENSOR REMARK 3 L11: 13.3994 L22: 42.5230 REMARK 3 L33: 0.9330 L12: -4.7570 REMARK 3 L13: -2.4041 L23: -3.6193 REMARK 3 S TENSOR REMARK 3 S11: -0.6969 S12: -2.0368 S13: -1.4944 REMARK 3 S21: 2.4649 S22: 0.3614 S23: 0.0074 REMARK 3 S31: -0.0953 S32: 0.3206 S33: 0.3355 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 122 A 195 REMARK 3 ORIGIN FOR THE GROUP (A): -3.1055 7.6501 5.4371 REMARK 3 T TENSOR REMARK 3 T11: 0.0781 T22: 0.3642 REMARK 3 T33: 0.1198 T12: -0.0535 REMARK 3 T13: -0.0014 T23: 0.0478 REMARK 3 L TENSOR REMARK 3 L11: 4.1981 L22: 4.9798 REMARK 3 L33: 2.0015 L12: -0.6614 REMARK 3 L13: -0.1706 L23: 0.6522 REMARK 3 S TENSOR REMARK 3 S11: -0.2368 S12: -0.0833 S13: -0.5323 REMARK 3 S21: -0.1064 S22: 0.1201 S23: 0.4727 REMARK 3 S31: 0.1696 S32: -0.5157 S33: 0.1167 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 196 A 202 REMARK 3 ORIGIN FOR THE GROUP (A): -10.3671 21.3499 13.9030 REMARK 3 T TENSOR REMARK 3 T11: 0.8986 T22: 2.0021 REMARK 3 T33: 0.2358 T12: -0.7851 REMARK 3 T13: -0.2856 T23: -0.0120 REMARK 3 L TENSOR REMARK 3 L11: 65.5061 L22: 46.3450 REMARK 3 L33: 13.7729 L12: -22.9193 REMARK 3 L13: -5.1747 L23: 11.5860 REMARK 3 S TENSOR REMARK 3 S11: 0.3227 S12: -4.9312 S13: 2.0372 REMARK 3 S21: -0.0282 S22: 0.7844 S23: -2.1792 REMARK 3 S31: 2.6143 S32: -3.8370 S33: -1.1071 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 203 A 211 REMARK 3 ORIGIN FOR THE GROUP (A): -13.7544 29.5878 10.7537 REMARK 3 T TENSOR REMARK 3 T11: 1.0961 T22: 1.3914 REMARK 3 T33: 0.8755 T12: 0.2221 REMARK 3 T13: 0.6334 T23: -0.2934 REMARK 3 L TENSOR REMARK 3 L11: 17.6221 L22: 23.6072 REMARK 3 L33: 36.2375 L12: 12.2883 REMARK 3 L13: -2.9135 L23: 21.1566 REMARK 3 S TENSOR REMARK 3 S11: 2.8871 S12: -2.0190 S13: 3.4129 REMARK 3 S21: 0.1243 S22: -0.9724 S23: 1.5006 REMARK 3 S31: -3.3733 S32: 1.0216 S33: -1.9146 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 212 A 314 REMARK 3 ORIGIN FOR THE GROUP (A): 13.8542 22.8986 2.2114 REMARK 3 T TENSOR REMARK 3 T11: 0.1050 T22: 0.2155 REMARK 3 T33: 0.1763 T12: 0.0177 REMARK 3 T13: -0.0777 T23: -0.1206 REMARK 3 L TENSOR REMARK 3 L11: 1.8985 L22: 3.5498 REMARK 3 L33: 1.6382 L12: 0.1916 REMARK 3 L13: -0.5380 L23: -1.4269 REMARK 3 S TENSOR REMARK 3 S11: -0.2473 S12: -0.1741 S13: 0.2926 REMARK 3 S21: 0.1582 S22: 0.1677 S23: -0.3774 REMARK 3 S31: -0.2227 S32: -0.0352 S33: 0.0796 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 315 A 333 REMARK 3 ORIGIN FOR THE GROUP (A): 14.5862 29.0216 6.5348 REMARK 3 T TENSOR REMARK 3 T11: 0.2087 T22: 0.5702 REMARK 3 T33: 0.4889 T12: -0.1276 REMARK 3 T13: -0.0487 T23: -0.3445 REMARK 3 L TENSOR REMARK 3 L11: 11.6715 L22: 10.9573 REMARK 3 L33: 6.5995 L12: -7.2029 REMARK 3 L13: 6.6088 L23: -8.1469 REMARK 3 S TENSOR REMARK 3 S11: -0.4424 S12: 0.4661 S13: 1.3542 REMARK 3 S21: 0.7621 S22: -0.1294 S23: -0.9444 REMARK 3 S31: -0.6853 S32: 0.5804 S33: 0.5717 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 334 A 384 REMARK 3 ORIGIN FOR THE GROUP (A): 15.8775 9.0838 7.5017 REMARK 3 T TENSOR REMARK 3 T11: 0.0446 T22: 0.1757 REMARK 3 T33: 0.1983 T12: 0.0240 REMARK 3 T13: -0.0440 T23: -0.0223 REMARK 3 L TENSOR REMARK 3 L11: 7.6548 L22: 8.9403 REMARK 3 L33: 5.8210 L12: -4.2324 REMARK 3 L13: 0.9507 L23: -0.2504 REMARK 3 S TENSOR REMARK 3 S11: -0.1289 S12: -0.4824 S13: -0.1863 REMARK 3 S21: -0.0254 S22: 0.2771 S23: -0.4223 REMARK 3 S31: 0.3428 S32: 0.3192 S33: -0.1482 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3O1A COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUL-10. REMARK 100 THE RCSB ID CODE IS RCSB060538. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97824 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16371 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.8 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.57000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1LFK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BICINE, 0.2 M NACL, 16% (V/V) REMARK 280 POLYETHYLENE GLYCOL 20000, PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 24.90667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 49.81333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -32 REMARK 465 HIS A -31 REMARK 465 HIS A -30 REMARK 465 HIS A -29 REMARK 465 HIS A -28 REMARK 465 HIS A -27 REMARK 465 HIS A -26 REMARK 465 GLY A -25 REMARK 465 LYS A -24 REMARK 465 PRO A -23 REMARK 465 ILE A -22 REMARK 465 PRO A -21 REMARK 465 ASN A -20 REMARK 465 PRO A -19 REMARK 465 LEU A -18 REMARK 465 LEU A -17 REMARK 465 GLY A -16 REMARK 465 LEU A -15 REMARK 465 ASP A -14 REMARK 465 SER A -13 REMARK 465 THR A -12 REMARK 465 GLU A -11 REMARK 465 ASN A -10 REMARK 465 LEU A -9 REMARK 465 TYR A -8 REMARK 465 PHE A -7 REMARK 465 GLN A -6 REMARK 465 GLY A -5 REMARK 465 ILE A -4 REMARK 465 ASP A -3 REMARK 465 PRO A -2 REMARK 465 PHE A -1 REMARK 465 THR A 0 REMARK 465 MET A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 67 CG OD1 OD2 REMARK 470 ASP A 68 CG OD1 OD2 REMARK 470 GLU A 69 CG CD OE1 OE2 REMARK 470 ASP A 71 CG OD1 OD2 REMARK 470 ARG A 72 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 11 -110.57 65.92 REMARK 500 MET A 36 -147.08 58.39 REMARK 500 ASP A 37 35.15 -93.04 REMARK 500 ALA A 134 -55.37 -147.31 REMARK 500 HIS A 207 44.59 -140.57 REMARK 500 ARG A 253 -70.85 -49.24 REMARK 500 LYS A 255 62.61 62.38 REMARK 500 HIS A 331 124.18 -33.38 REMARK 500 CYS A 332 117.28 -34.11 REMARK 500 ALA A 373 -132.31 61.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 385 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 391 O REMARK 620 2 HEM A 385 NA 86.4 REMARK 620 3 HEM A 385 NB 87.9 91.1 REMARK 620 4 HEM A 385 NC 90.4 176.8 88.9 REMARK 620 5 HEM A 385 ND 89.9 87.5 177.5 92.4 REMARK 620 6 CYS A 332 SG 172.4 100.9 89.8 82.3 92.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 385 DBREF 3O1A A 1 384 UNP Q6ZZI7 Q6ZZI7_ACTTI 1 384 SEQADV 3O1A MET A -32 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A HIS A -31 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A HIS A -30 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A HIS A -29 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A HIS A -28 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A HIS A -27 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A HIS A -26 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A GLY A -25 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A LYS A -24 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A PRO A -23 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A ILE A -22 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A PRO A -21 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A ASN A -20 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A PRO A -19 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A LEU A -18 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A LEU A -17 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A GLY A -16 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A LEU A -15 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A ASP A -14 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A SER A -13 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A THR A -12 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A GLU A -11 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A ASN A -10 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A LEU A -9 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A TYR A -8 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A PHE A -7 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A GLN A -6 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A GLY A -5 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A ILE A -4 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A ASP A -3 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A PRO A -2 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A PHE A -1 UNP Q6ZZI7 EXPRESSION TAG SEQADV 3O1A THR A 0 UNP Q6ZZI7 EXPRESSION TAG SEQRES 1 A 417 MET HIS HIS HIS HIS HIS HIS GLY LYS PRO ILE PRO ASN SEQRES 2 A 417 PRO LEU LEU GLY LEU ASP SER THR GLU ASN LEU TYR PHE SEQRES 3 A 417 GLN GLY ILE ASP PRO PHE THR MET ALA LEU PRO LEU PRO SEQRES 4 A 417 HIS GLN ARG LEU ARG LEU ASP PRO VAL PRO GLU PHE GLU SEQRES 5 A 417 GLU LEU GLN LYS ALA GLY PRO LEU HIS GLU TYR ASP THR SEQRES 6 A 417 GLU PRO GLY MET ASP GLY ARG LYS GLN TRP LEU VAL THR SEQRES 7 A 417 GLY HIS ASP GLU VAL ARG ALA ILE LEU ALA ASP HIS GLU SEQRES 8 A 417 ARG PHE SER SER MET ARG PRO VAL ASP ASP GLU ALA ASP SEQRES 9 A 417 ARG ALA LEU LEU PRO GLY ILE LEU GLN ALA TYR ASP PRO SEQRES 10 A 417 PRO ASP HIS THR ARG LEU ARG ARG THR VAL ALA PRO ALA SEQRES 11 A 417 TYR SER ALA ARG ARG MET GLU ARG LEU ARG PRO ARG ILE SEQRES 12 A 417 GLU GLU ILE VAL GLU GLU CYS LEU ASP ASP PHE GLU SER SEQRES 13 A 417 VAL GLY ALA PRO VAL ASP PHE VAL ARG HIS ALA ALA TRP SEQRES 14 A 417 PRO ILE PRO ALA TYR ILE ALA CYS GLU PHE LEU GLY VAL SEQRES 15 A 417 PRO ARG ASP ASP GLN ALA GLU LEU SER ARG MET ILE ARG SEQRES 16 A 417 GLU SER ARG GLU SER ARG LEU PRO ARG GLN ARG THR LEU SEQRES 17 A 417 SER GLY LEU GLY ILE VAL ASN TYR THR LYS ARG LEU THR SEQRES 18 A 417 SER GLY LYS ARG ARG ASP PRO GLY ASP GLY MET ILE GLY SEQRES 19 A 417 VAL ILE VAL ARG GLU HIS GLY ALA GLU ILE SER ASP GLU SEQRES 20 A 417 GLU LEU ALA GLY LEU ALA GLU GLY ASN LEU ILE MET ALA SEQRES 21 A 417 ALA GLU GLN MET ALA ALA GLN LEU ALA VAL ALA VAL LEU SEQRES 22 A 417 LEU LEU VAL THR HIS PRO ASP GLN MET ALA LEU LEU ARG SEQRES 23 A 417 GLU LYS PRO GLU LEU ILE ASP SER ALA THR GLU GLU VAL SEQRES 24 A 417 LEU ARG HIS ALA SER ILE VAL GLU ALA PRO ALA PRO ARG SEQRES 25 A 417 VAL ALA LEU ALA ASP VAL ARG MET ALA GLY ARG ASP ILE SEQRES 26 A 417 HIS ALA GLY ASP VAL LEU THR CYS SER MET LEU ALA THR SEQRES 27 A 417 ASN ARG ALA PRO GLY ASP ARG PHE ASP ILE THR ARG GLU SEQRES 28 A 417 LYS ALA THR HIS MET ALA PHE GLY HIS GLY ILE HIS HIS SEQRES 29 A 417 CYS ILE GLY ALA PRO LEU ALA ARG LEU GLN LEU ARG VAL SEQRES 30 A 417 ALA LEU PRO ALA VAL VAL GLY ARG PHE PRO SER LEU ARG SEQRES 31 A 417 LEU ALA VAL PRO GLU GLU ASP LEU ARG PHE LYS PRO GLY SEQRES 32 A 417 ARG PRO ALA PRO PHE ALA VAL GLU GLU LEU PRO LEU GLU SEQRES 33 A 417 TRP HET HEM A 385 43 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM HEME FORMUL 2 HEM C34 H32 FE N4 O4 FORMUL 3 HOH *15(H2 O) HELIX 1 1 PRO A 4 HIS A 7 5 4 HELIX 2 2 VAL A 15 GLY A 25 1 11 HELIX 3 3 GLY A 46 ASP A 56 1 11 HELIX 4 4 ILE A 78 TYR A 82 5 5 HELIX 5 5 PRO A 85 ALA A 95 1 11 HELIX 6 6 PRO A 96 TYR A 98 5 3 HELIX 7 7 SER A 99 VAL A 124 1 26 HELIX 8 8 PHE A 130 ALA A 134 1 5 HELIX 9 9 TRP A 136 LEU A 147 1 12 HELIX 10 10 PRO A 150 SER A 167 1 18 HELIX 11 11 LEU A 169 ASP A 194 1 26 HELIX 12 12 GLY A 198 GLY A 208 1 11 HELIX 13 13 SER A 212 THR A 244 1 33 HELIX 14 14 HIS A 245 GLU A 254 1 10 HELIX 15 15 LYS A 255 GLU A 257 5 3 HELIX 16 16 LEU A 258 SER A 271 1 14 HELIX 17 17 SER A 301 ARG A 307 1 7 HELIX 18 18 HIS A 327 HIS A 331 5 5 HELIX 19 19 GLY A 334 PHE A 353 1 20 HELIX 20 20 PRO A 361 LEU A 365 5 5 SHEET 1 A 2 ARG A 9 LEU A 10 0 SHEET 2 A 2 ASP A 13 PRO A 14 -1 O ASP A 13 N LEU A 10 SHEET 1 B 5 LEU A 27 HIS A 28 0 SHEET 2 B 5 GLN A 41 VAL A 44 -1 O LEU A 43 N HIS A 28 SHEET 3 B 5 VAL A 297 CYS A 300 1 O THR A 299 N VAL A 44 SHEET 4 B 5 ARG A 279 ALA A 281 -1 N ARG A 279 O LEU A 298 SHEET 5 B 5 PHE A 60 SER A 61 -1 N SER A 61 O VAL A 280 SHEET 1 C 3 VAL A 128 ASP A 129 0 SHEET 2 C 3 PRO A 381 GLU A 383 -1 O LEU A 382 N VAL A 128 SHEET 3 C 3 ARG A 357 LEU A 358 -1 N ARG A 357 O GLU A 383 SHEET 1 D 2 VAL A 285 MET A 287 0 SHEET 2 D 2 ARG A 290 ILE A 292 -1 O ILE A 292 N VAL A 285 SHEET 1 E 2 PHE A 367 LYS A 368 0 SHEET 2 E 2 ALA A 376 VAL A 377 -1 O ALA A 376 N LYS A 368 LINK FE HEM A 385 O HOH A 391 1555 1555 1.97 LINK SG CYS A 332 FE HEM A 385 1555 1555 2.39 CISPEP 1 MET A 36 ASP A 37 0 -3.97 CISPEP 2 PRO A 84 PRO A 85 0 4.69 CISPEP 3 ALA A 126 PRO A 127 0 -0.17 SITE 1 AC1 21 LEU A 79 GLN A 80 HIS A 87 ARG A 91 SITE 2 AC1 21 TYR A 98 ASN A 223 ALA A 227 MET A 231 SITE 3 AC1 21 VAL A 273 PRO A 276 ALA A 277 ARG A 279 SITE 4 AC1 21 ALA A 324 PHE A 325 GLY A 326 ILE A 329 SITE 5 AC1 21 HIS A 330 CYS A 332 ILE A 333 GLY A 334 SITE 6 AC1 21 HOH A 391 CRYST1 75.680 75.680 74.720 90.00 90.00 120.00 P 31 3 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013214 0.007629 0.000000 0.00000 SCALE2 0.000000 0.015258 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013383 0.00000 MASTER 470 0 1 20 14 0 6 6 0 0 0 33 END