HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 30-JUN-10 3NRF TITLE CRYSTAL STRUCTURE OF AN APAG PROTEIN (PA1934) FROM PSEUDOMONAS TITLE 2 AERUGINOSA PAO1 AT 1.50 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: APAG PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: PA1934; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI-2, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 17-JUL-19 3NRF 1 REMARK LINK REVDAT 4 08-NOV-17 3NRF 1 REMARK REVDAT 3 16-NOV-11 3NRF 1 TITLE REVDAT 2 20-JUL-11 3NRF 1 HEADER REVDAT 1 28-JUL-10 3NRF 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF AN APAG PROTEIN (PA1934) FROM JRNL TITL 2 PSEUDOMONAS AERUGINOSA AT 1.50 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 32812 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1666 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2229 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.2740 REMARK 3 BIN FREE R VALUE SET COUNT : 108 REMARK 3 BIN FREE R VALUE : 0.3100 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1508 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 212 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.21000 REMARK 3 B22 (A**2) : -0.52000 REMARK 3 B33 (A**2) : -0.68000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.084 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.062 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.387 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1706 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1155 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2341 ; 1.697 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2837 ; 0.895 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 250 ; 4.317 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 80 ;31.772 ;24.250 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 297 ; 9.911 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;11.653 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 274 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1988 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 352 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1091 ; 3.608 ;35.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 445 ; 2.687 ;35.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1761 ; 4.366 ; 8.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 615 ; 3.637 ;11.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 558 ; 4.053 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 25 A 126 REMARK 3 ORIGIN FOR THE GROUP (A): 30.4095 13.1912 27.0536 REMARK 3 T TENSOR REMARK 3 T11: 0.0394 T22: 0.0594 REMARK 3 T33: 0.0592 T12: 0.0081 REMARK 3 T13: -0.0203 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 1.8374 L22: 1.1659 REMARK 3 L33: 0.5640 L12: 0.5720 REMARK 3 L13: -0.2835 L23: -0.1165 REMARK 3 S TENSOR REMARK 3 S11: 0.0537 S12: 0.0926 S13: -0.0781 REMARK 3 S21: -0.0764 S22: -0.0348 S23: 0.0551 REMARK 3 S31: -0.0278 S32: -0.0539 S33: -0.0189 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 23 B 125 REMARK 3 ORIGIN FOR THE GROUP (A): 14.9751 13.3357 51.5627 REMARK 3 T TENSOR REMARK 3 T11: 0.0726 T22: 0.0472 REMARK 3 T33: 0.0647 T12: 0.0119 REMARK 3 T13: -0.0175 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 0.6488 L22: 1.0837 REMARK 3 L33: 1.7229 L12: 0.1956 REMARK 3 L13: -0.2165 L23: 0.2822 REMARK 3 S TENSOR REMARK 3 S11: 0.1137 S12: -0.0855 S13: -0.0644 REMARK 3 S21: 0.1987 S22: -0.0088 S23: 0.1332 REMARK 3 S31: 0.1206 S32: -0.0389 S33: -0.1049 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL B FACTORS. 3. ANISOU RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL U FACTORS. 4. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 5.(4R)-2-METHYL- 2,4-PENTANEDIOL (MRD),AND REMARK 3 CACODYLATE (CAC) FROM THE CRYSTALLIZATION WERE MODELED INTO THE REMARK 3 STRUCTURE. THE MODELING OF CACODYLATE IS SUPPORTED BY ANOMALOUS REMARK 3 DIFFERENCE MAPS. 5. SOLVENT MOLECULES WERE EXCLUDED FROM THE REMARK 3 ASSIGNMENT OF THE TLS GROUPS. REMARK 4 REMARK 4 3NRF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000060186. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAY-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97936,0.97922 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, TOROID REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32823 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 29.178 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09800 REMARK 200 FOR THE DATA SET : 8.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.79800 REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40.000000000% MPD, 5.000000000% PEG REMARK 280 -8000, 0.1M CACODYLATE PH 6.5, NANODROP, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.89400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 30.89400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.67150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.24550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 34.67150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.24550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 30.89400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.67150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.24550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 30.89400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 34.67150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.24550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A REMARK 300 TETRAMER AS A SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 69.34300 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 92.68200 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ALA A 22 REMARK 465 ALA A 23 REMARK 465 PRO A 24 REMARK 465 GLY B 0 REMARK 465 ALA B 22 REMARK 465 LYS B 126 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 25 CG OD1 OD2 REMARK 470 LYS A 60 CG CD CE NZ REMARK 470 LYS A 126 CG CD CE NZ REMARK 470 ARG B 32 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 25 48.30 -82.37 REMARK 500 ASP B 110 -157.64 -100.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 128 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD B 127 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD B 129 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CAC B 130 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 416839 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT (RESIDUES 22-126) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE DBREF 3NRF A 22 126 UNP Q9I2H0 Q9I2H0_PSEAE 22 126 DBREF 3NRF B 22 126 UNP Q9I2H0 Q9I2H0_PSEAE 22 126 SEQADV 3NRF GLY A 0 UNP Q9I2H0 LEADER SEQUENCE SEQADV 3NRF GLY B 0 UNP Q9I2H0 LEADER SEQUENCE SEQRES 1 A 106 GLY ALA ALA PRO ASP ALA VAL MSE VAL PHE ALA ARG GLN SEQRES 2 A 106 GLY ASP LYS GLY SER VAL SER VAL GLY ASP LYS HIS PHE SEQRES 3 A 106 ARG THR GLN ALA PHE LYS VAL ARG LEU VAL ASN ALA ALA SEQRES 4 A 106 LYS SER GLU ILE SER LEU LYS ASN SER CYS LEU VAL ALA SEQRES 5 A 106 GLN SER ALA ALA GLY GLN SER PHE ARG LEU ASP THR VAL SEQRES 6 A 106 ASP GLU GLU LEU THR ALA ASP THR LEU LYS PRO GLY ALA SEQRES 7 A 106 SER VAL GLU GLY ASP ALA ILE PHE ALA SER GLU ASP ASP SEQRES 8 A 106 ALA VAL TYR GLY ALA SER LEU VAL ARG LEU SER ASP ARG SEQRES 9 A 106 CYS LYS SEQRES 1 B 106 GLY ALA ALA PRO ASP ALA VAL MSE VAL PHE ALA ARG GLN SEQRES 2 B 106 GLY ASP LYS GLY SER VAL SER VAL GLY ASP LYS HIS PHE SEQRES 3 B 106 ARG THR GLN ALA PHE LYS VAL ARG LEU VAL ASN ALA ALA SEQRES 4 B 106 LYS SER GLU ILE SER LEU LYS ASN SER CYS LEU VAL ALA SEQRES 5 B 106 GLN SER ALA ALA GLY GLN SER PHE ARG LEU ASP THR VAL SEQRES 6 B 106 ASP GLU GLU LEU THR ALA ASP THR LEU LYS PRO GLY ALA SEQRES 7 B 106 SER VAL GLU GLY ASP ALA ILE PHE ALA SER GLU ASP ASP SEQRES 8 B 106 ALA VAL TYR GLY ALA SER LEU VAL ARG LEU SER ASP ARG SEQRES 9 B 106 CYS LYS MODRES 3NRF MSE A 28 MET SELENOMETHIONINE MODRES 3NRF MSE B 28 MET SELENOMETHIONINE HET MSE A 28 8 HET MSE B 28 8 HET MRD A 128 8 HET MRD B 127 8 HET MRD B 129 8 HET CAC B 130 5 HETNAM MSE SELENOMETHIONINE HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL HETNAM CAC CACODYLATE ION HETSYN CAC DIMETHYLARSINATE FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 3 MRD 3(C6 H14 O2) FORMUL 6 CAC C2 H6 AS O2 1- FORMUL 7 HOH *212(H2 O) HELIX 1 1 GLU A 87 ALA A 91 5 5 HELIX 2 2 ASP A 111 TYR A 114 5 4 HELIX 3 3 GLU B 87 ALA B 91 5 5 HELIX 4 4 ASP B 111 ALA B 116 5 6 SHEET 1 A12 ALA A 116 SER A 122 0 SHEET 2 A12 CYS A 69 SER A 74 -1 N CYS A 69 O SER A 122 SHEET 3 A12 SER A 79 VAL A 85 -1 O PHE A 80 N ALA A 72 SHEET 4 A12 SER A 99 SER A 108 -1 O ILE A 105 N ASP A 83 SHEET 5 A12 LYS A 44 VAL A 56 -1 N ARG A 47 O SER A 108 SHEET 6 A12 MSE A 28 VAL A 41 -1 N VAL A 41 O LYS A 44 SHEET 7 A12 VAL B 27 VAL B 41 -1 O SER B 40 N VAL A 29 SHEET 8 A12 LYS B 44 ASN B 57 -1 O ALA B 50 N GLY B 34 SHEET 9 A12 SER B 99 SER B 108 -1 O SER B 108 N ARG B 47 SHEET 10 A12 SER B 79 VAL B 85 -1 N THR B 84 O ILE B 105 SHEET 11 A12 CYS B 69 GLN B 73 -1 N ALA B 72 O PHE B 80 SHEET 12 A12 LEU B 118 SER B 122 -1 O ARG B 120 N VAL B 71 SHEET 1 B 2 ILE A 63 SER A 64 0 SHEET 2 B 2 THR A 93 LEU A 94 -1 O LEU A 94 N ILE A 63 SHEET 1 C 2 ILE B 63 SER B 64 0 SHEET 2 C 2 THR B 93 LEU B 94 -1 O LEU B 94 N ILE B 63 SSBOND 1 CYS A 69 CYS A 125 1555 1555 2.08 SSBOND 2 CYS B 69 CYS B 125 1555 1555 2.04 LINK C VAL A 27 N MSE A 28 1555 1555 1.33 LINK C MSE A 28 N VAL A 29 1555 1555 1.32 LINK C VAL B 27 N MSE B 28 1555 1555 1.32 LINK C MSE B 28 N VAL B 29 1555 1555 1.32 SITE 1 AC1 4 PHE A 30 ARG A 32 LYS A 52 GLU A 101 SITE 1 AC2 2 LYS B 52 GLU B 101 SITE 1 AC3 3 THR B 84 VAL B 85 ASP B 86 SITE 1 AC4 9 ARG A 120 SER A 122 ARG A 124 HOH A 311 SITE 2 AC4 9 GLN B 73 SER B 79 ARG B 120 SER B 122 SITE 3 AC4 9 HOH B 310 CRYST1 69.343 96.491 61.788 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014421 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010364 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016184 0.00000 MASTER 376 0 6 4 16 0 6 6 0 0 0 18 END