HEADER LIGASE 26-MAY-10 3N6X TITLE CRYSTAL STRUCTURE OF A PUTATIVE GLUTATHIONYLSPERMIDINE SYNTHASE TITLE 2 (MFLA_0391) FROM METHYLOBACILLUS FLAGELLATUS KT AT 2.35 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE GLUTATHIONYLSPERMIDINE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHYLOBACILLUS FLAGELLATUS; SOURCE 3 ORGANISM_TAXID: 265072; SOURCE 4 STRAIN: KT / ATCC 51484 / DSM 6875; SOURCE 5 GENE: MFLA_0391; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDENATS KEYWDS DOMAIN OF UNKNOWN FUNCTION (DUF404), STRUCTURAL GENOMICS, JOINT KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 PSI-2, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 2 25-OCT-17 3N6X 1 REMARK REVDAT 1 09-JUN-10 3N6X 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE GLUTATHIONYLSPERMIDINE JRNL TITL 2 SYNTHASE (MFLA_0391) FROM METHYLOBACILLUS FLAGELLATUS KT AT JRNL TITL 3 2.35 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 31648 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1599 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 2.4300 - 2.3500 0.00 2593 137 0.2030 0.2440 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.94 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.23900 REMARK 3 B22 (A**2) : -0.23900 REMARK 3 B33 (A**2) : 0.47900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3739 REMARK 3 ANGLE : 0.730 5069 REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL 539 REMARK 3 DIHEDRAL : NULL 1279 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. GLYCEROL (GOL), SULFLATE (SO4) AND CHLORIDE REMARK 3 (CL) MODELED ARE PRESENT PURIFICATION/CRYSTALLIZATION/CRYO REMARK 3 CONDITIONS. 3. THE FOLLOWING REGIONS HAVE POOR DENSITY, THE REMARK 3 CORRESPONDING MODEL IS NOT RELIABLE: 13-19,33-37,227-231. THE REMARK 3 SOLVENT REGION IS NOISY. REMARK 4 REMARK 4 3N6X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1000059456. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JAN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97927,0.97911 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, TOROID REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31751 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 29.944 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.83300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: DATA WERE SCALED USING XSCALE WITH FRIEDEL PAIRS KEPT AS REMARK 200 SEPARATE WHEN COMPUTING R-SYM, COMPLETENESS AND . REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.8000M AMMONIUM SULFATE, 0.1M MES PH REMARK 280 6.0, ADDITIVE: 0.003 M ADENOSINE 5'-TRIPHOSPHATE MAGNESIUM SALT, REMARK 280 NANODROP', VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.74350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 48.67200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 48.67200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 38.87175 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 48.67200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 48.67200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 116.61525 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 48.67200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.67200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 38.87175 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 48.67200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.67200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 116.61525 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 77.74350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE REMARK 300 ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE IN REMARK 300 SOLUTION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -177.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 97.34400 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 97.34400 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 77.74350 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 ASP A 2 REMARK 465 THR A 3 REMARK 465 ALA A 4 REMARK 465 LYS A 5 REMARK 465 ASN A 57 REMARK 465 VAL A 58 REMARK 465 TYR A 59 REMARK 465 GLY A 60 REMARK 465 GLU A 61 REMARK 465 ASP A 62 REMARK 465 ALA A 63 REMARK 465 GLY A 64 REMARK 465 ALA A 65 REMARK 465 GLU A 66 REMARK 465 ARG A 67 REMARK 465 GLY A 371 REMARK 465 SER A 372 REMARK 465 GLY A 373 REMARK 465 GLY A 374 REMARK 465 TYR A 375 REMARK 465 ASP A 473 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 6 OG1 CG2 REMARK 470 LYS A 7 CG CD CE NZ REMARK 470 GLN A 15 CG CD OE1 NE2 REMARK 470 ASP A 16 CG OD1 OD2 REMARK 470 LEU A 68 CG CD1 CD2 REMARK 470 ARG A 85 CZ NH1 NH2 REMARK 470 ASN A 154 CG OD1 ND2 REMARK 470 GLN A 370 CG CD OE1 NE2 REMARK 470 LYS A 385 CG CD CE NZ REMARK 470 ARG A 394 CZ NH1 NH2 REMARK 470 GLU A 418 CG CD OE1 OE2 REMARK 470 SER A 460 OG REMARK 470 GLN A 461 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 14 -161.07 -71.39 REMARK 500 ASP A 16 -132.70 -100.69 REMARK 500 HIS A 35 -169.53 59.98 REMARK 500 GLN A 36 25.47 -79.91 REMARK 500 HIS A 106 -111.85 -129.93 REMARK 500 ARG A 164 -75.61 -87.72 REMARK 500 TYR A 227 42.97 -82.17 REMARK 500 PHE A 286 -135.38 -119.60 REMARK 500 ASN A 398 73.09 -160.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 474 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 475 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 476 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 477 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 478 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 479 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 480 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 481 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 482 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 483 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 484 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 485 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 486 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 487 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 488 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 489 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 490 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 491 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 492 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 493 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 494 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 495 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 496 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 497 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 374190 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH AN N-TERMINAL PURIFICATION TAG REMARK 999 MGSDKIHHHHHHKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEAENLYFQG. TH REMARK 999 E TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) REMARK 999 FOLLOWED THE TARGET SEQUENCE. DBREF 3N6X A 1 473 UNP Q1H4C5 Q1H4C5_METFK 1 473 SEQADV 3N6X GLY A 0 UNP Q1H4C5 LEADER SEQUENCE SEQRES 1 A 474 GLY MSE ASP THR ALA LYS THR LYS PRO PHE ASP GLU MSE SEQRES 2 A 474 PHE LEU GLN ASP GLU VAL ILE ARG PRO ILE TYR ALA GLU SEQRES 3 A 474 TYR ALA ALA TRP LEU GLN ASP VAL PRO HIS GLN GLN LEU SEQRES 4 A 474 GLU SER LYS ARG GLN GLU ALA GLU LEU LEU PHE ARG ARG SEQRES 5 A 474 VAL GLY ILE THR PHE ASN VAL TYR GLY GLU ASP ALA GLY SEQRES 6 A 474 ALA GLU ARG LEU ILE PRO PHE ASP VAL VAL PRO ARG ILE SEQRES 7 A 474 LEU SER ALA SER GLU TRP ALA ARG LEU SER ASP GLY ALA SEQRES 8 A 474 ILE GLN ARG VAL LYS ALA LEU ASN MSE PHE LEU HIS ASP SEQRES 9 A 474 VAL TYR HIS ASP GLN GLU ILE ILE LYS ALA GLY ILE VAL SEQRES 10 A 474 PRO SER SER ILE LEU ALA ASN ALA GLN TYR ARG PRO GLU SEQRES 11 A 474 MSE PHE GLY VAL ASP VAL PRO GLY GLY VAL TYR ALA HIS SEQRES 12 A 474 ILE ALA GLY VAL ASP LEU VAL ARG THR GLY GLU ASN ASP SEQRES 13 A 474 PHE TYR VAL LEU GLU ASP ASN LEU ARG THR PRO SER GLY SEQRES 14 A 474 VAL SER TYR MSE LEU GLU ASN ARG LYS MSE MSE MSE ARG SEQRES 15 A 474 LEU PHE PRO GLU LEU PHE ARG ARG TYR PRO VAL ALA PRO SEQRES 16 A 474 VAL GLU HIS TYR PRO GLN VAL LEU LEU ASN ASN LEU ARG SEQRES 17 A 474 ALA VAL ALA GLN ALA GLY VAL HIS GLU PRO THR VAL VAL SEQRES 18 A 474 LEU LEU THR PRO GLY ALA TYR ASN SER ALA TYR PHE GLU SEQRES 19 A 474 HIS ALA PHE ILE ALA GLN GLN MSE GLY ILE GLU LEU VAL SEQRES 20 A 474 GLU GLY GLN ASP LEU PHE VAL ARG ASN ASN ALA VAL TYR SEQRES 21 A 474 MSE ARG THR THR GLU GLY PRO LYS ARG VAL ASP VAL ILE SEQRES 22 A 474 TYR ARG ARG ILE ASP ASP ASP PHE ILE ASP PRO LEU SER SEQRES 23 A 474 PHE ARG PRO ASP SER MSE LEU GLY VAL PRO GLY LEU LEU SEQRES 24 A 474 SER VAL TYR ARG ASN GLY GLY VAL THR LEU ALA ASN ALA SEQRES 25 A 474 VAL GLY THR GLY VAL ALA ASP ASP LYS ASP THR TYR ILE SEQRES 26 A 474 TYR VAL PRO GLU MSE ILE ARG PHE TYR LEU GLY GLU GLU SEQRES 27 A 474 PRO ILE LEU SER ASN VAL PRO THR TYR GLN LEU SER LYS SEQRES 28 A 474 ALA ASP ASP LEU LYS TYR VAL LEU ASP ASN LEU ALA GLU SEQRES 29 A 474 LEU VAL VAL LYS GLU VAL GLN GLY SER GLY GLY TYR GLY SEQRES 30 A 474 MSE LEU VAL GLY PRO ALA ALA SER LYS GLN GLU LEU GLU SEQRES 31 A 474 ASP PHE ARG GLN ARG ILE LEU ALA ASN PRO ALA ASN TYR SEQRES 32 A 474 ILE ALA GLN PRO THR LEU ALA LEU SER THR CYS PRO THR SEQRES 33 A 474 LEU VAL GLU THR GLY ILE ALA PRO ARG HIS VAL ASP LEU SEQRES 34 A 474 ARG PRO PHE VAL LEU SER GLY LYS THR VAL SER LEU VAL SEQRES 35 A 474 PRO GLY ALA LEU CYS ARG VAL ALA LEU ARG GLU GLY SER SEQRES 36 A 474 LEU VAL VAL ASN SER SER GLN GLY GLY GLY THR LYS ASP SEQRES 37 A 474 THR TRP ILE LEU LYS ASP MODRES 3N6X MSE A 12 MET SELENOMETHIONINE MODRES 3N6X MSE A 99 MET SELENOMETHIONINE MODRES 3N6X MSE A 130 MET SELENOMETHIONINE MODRES 3N6X MSE A 172 MET SELENOMETHIONINE MODRES 3N6X MSE A 178 MET SELENOMETHIONINE MODRES 3N6X MSE A 179 MET SELENOMETHIONINE MODRES 3N6X MSE A 180 MET SELENOMETHIONINE MODRES 3N6X MSE A 241 MET SELENOMETHIONINE MODRES 3N6X MSE A 260 MET SELENOMETHIONINE MODRES 3N6X MSE A 291 MET SELENOMETHIONINE MODRES 3N6X MSE A 329 MET SELENOMETHIONINE MODRES 3N6X MSE A 377 MET SELENOMETHIONINE HET MSE A 12 8 HET MSE A 99 8 HET MSE A 130 8 HET MSE A 172 8 HET MSE A 178 8 HET MSE A 179 8 HET MSE A 180 8 HET MSE A 241 8 HET MSE A 260 8 HET MSE A 291 8 HET MSE A 329 8 HET MSE A 377 8 HET SO4 A 474 5 HET SO4 A 475 5 HET SO4 A 476 5 HET CL A 477 1 HET CL A 478 1 HET CL A 479 1 HET GOL A 480 6 HET GOL A 481 6 HET GOL A 482 6 HET GOL A 483 6 HET GOL A 484 6 HET GOL A 485 6 HET GOL A 486 6 HET GOL A 487 6 HET GOL A 488 6 HET GOL A 489 6 HET GOL A 490 6 HET GOL A 491 6 HET GOL A 492 6 HET GOL A 493 6 HET GOL A 494 6 HET GOL A 495 6 HET GOL A 496 6 HET GOL A 497 6 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 2 SO4 3(O4 S 2-) FORMUL 5 CL 3(CL 1-) FORMUL 8 GOL 18(C3 H8 O3) FORMUL 26 HOH *225(H2 O) HELIX 1 1 ARG A 20 ILE A 22 5 3 HELIX 2 2 TYR A 23 VAL A 33 1 11 HELIX 3 3 SER A 40 GLY A 53 1 14 HELIX 4 4 SER A 79 TYR A 105 1 27 HELIX 5 5 GLN A 108 ALA A 113 1 6 HELIX 6 6 PRO A 117 ASN A 123 5 7 HELIX 7 7 ARG A 127 PHE A 131 5 5 HELIX 8 8 VAL A 135 VAL A 139 5 5 HELIX 9 9 GLY A 168 PHE A 183 1 16 HELIX 10 10 PHE A 183 TYR A 190 1 8 HELIX 11 11 HIS A 197 VAL A 209 1 13 HELIX 12 12 ALA A 230 GLY A 242 1 13 HELIX 13 13 GLU A 247 GLN A 249 5 3 HELIX 14 14 ASP A 277 ILE A 281 5 5 HELIX 15 15 GLY A 296 ASN A 303 1 8 HELIX 16 16 THR A 314 ASP A 319 1 6 HELIX 17 17 THR A 322 ILE A 324 5 3 HELIX 18 18 TYR A 325 GLY A 335 1 11 HELIX 19 19 LYS A 350 ASN A 360 1 11 HELIX 20 20 PRO A 381 ALA A 383 5 3 HELIX 21 21 SER A 384 ASN A 398 1 15 SHEET 1 A 2 ARG A 76 LEU A 78 0 SHEET 2 A 2 THR A 468 ILE A 470 1 O TRP A 469 N LEU A 78 SHEET 1 B 5 SER A 341 ASN A 342 0 SHEET 2 B 5 PHE A 156 ASN A 162 1 N VAL A 158 O SER A 341 SHEET 3 B 5 ILE A 143 ARG A 150 -1 N ASP A 147 O LEU A 159 SHEET 4 B 5 PHE A 431 SER A 434 -1 O VAL A 432 N ALA A 144 SHEET 5 B 5 VAL A 438 LEU A 440 -1 O SER A 439 N LEU A 433 SHEET 1 C 4 GLU A 244 VAL A 246 0 SHEET 2 C 4 VAL A 219 LEU A 222 1 N LEU A 221 O VAL A 246 SHEET 3 C 4 VAL A 271 ARG A 274 1 O TYR A 273 N VAL A 220 SHEET 4 C 4 THR A 307 ALA A 309 1 O THR A 307 N ILE A 272 SHEET 1 D 3 LEU A 251 VAL A 253 0 SHEET 2 D 3 VAL A 258 MSE A 260 -1 O TYR A 259 N PHE A 252 SHEET 3 D 3 LYS A 267 VAL A 269 -1 O LYS A 267 N MSE A 260 SHEET 1 E 4 TYR A 346 GLN A 347 0 SHEET 2 E 4 TYR A 402 PRO A 406 -1 O ALA A 404 N TYR A 346 SHEET 3 E 4 LEU A 364 GLU A 368 -1 N VAL A 365 O GLN A 405 SHEET 4 E 4 MSE A 377 VAL A 379 -1 O LEU A 378 N VAL A 366 SHEET 1 F 4 THR A 412 VAL A 417 0 SHEET 2 F 4 GLY A 420 ARG A 429 -1 O GLY A 420 N VAL A 417 SHEET 3 F 4 LEU A 445 ALA A 449 -1 O ALA A 449 N HIS A 425 SHEET 4 F 4 GLY A 463 LYS A 466 -1 O GLY A 464 N VAL A 448 LINK C GLU A 11 N MSE A 12 1555 1555 1.36 LINK C MSE A 12 N PHE A 13 1555 1555 1.36 LINK C ASN A 98 N MSE A 99 1555 1555 1.34 LINK C MSE A 99 N PHE A 100 1555 1555 1.35 LINK C GLU A 129 N MSE A 130 1555 1555 1.34 LINK C MSE A 130 N PHE A 131 1555 1555 1.34 LINK C TYR A 171 N MSE A 172 1555 1555 1.34 LINK C MSE A 172 N LEU A 173 1555 1555 1.34 LINK C LYS A 177 N MSE A 178 1555 1555 1.35 LINK C MSE A 178 N MSE A 179 1555 1555 1.36 LINK C MSE A 179 N MSE A 180 1555 1555 1.36 LINK C MSE A 180 N ARG A 181 1555 1555 1.35 LINK C GLN A 240 N MSE A 241 1555 1555 1.33 LINK C MSE A 241 N GLY A 242 1555 1555 1.33 LINK C TYR A 259 N MSE A 260 1555 1555 1.33 LINK C MSE A 260 N ARG A 261 1555 1555 1.35 LINK C SER A 290 N MSE A 291 1555 1555 1.33 LINK C MSE A 291 N LEU A 292 1555 1555 1.35 LINK C GLU A 328 N MSE A 329 1555 1555 1.37 LINK C MSE A 329 N ILE A 330 1555 1555 1.35 LINK C GLY A 376 N MSE A 377 1555 1555 1.35 LINK C MSE A 377 N LEU A 378 1555 1555 1.34 CISPEP 1 ALA A 309 ASN A 310 0 0.58 SITE 1 AC1 8 ASN A 162 LEU A 163 ARG A 164 THR A 165 SITE 2 AC1 8 PRO A 166 ASP A 318 GOL A 491 HOH A 617 SITE 1 AC2 4 SER A 299 ARG A 302 ASN A 303 HOH A 610 SITE 1 AC3 3 ARG A 302 ASN A 303 GOL A 487 SITE 1 AC4 3 THR A 165 HIS A 234 ARG A 275 SITE 1 AC5 1 ARG A 331 SITE 1 AC6 1 VAL A 438 SITE 1 AC7 4 ALA A 226 ASN A 228 TYR A 231 PHE A 232 SITE 1 AC8 5 GLY A 53 ASN A 228 ILE A 276 ASP A 277 SITE 2 AC8 5 HOH A 507 SITE 1 AC9 6 GLU A 264 ILE A 324 ASN A 342 VAL A 343 SITE 2 AC9 6 HOH A 544 HOH A 703 SITE 1 BC1 6 ARG A 176 MSE A 180 VAL A 192 PRO A 194 SITE 2 BC1 6 HOH A 525 HOH A 557 SITE 1 BC2 5 MSE A 99 GLY A 435 VAL A 438 HOH A 509 SITE 2 BC2 5 HOH A 536 SITE 1 BC3 5 PRO A 21 ILE A 22 ALA A 24 GLU A 25 SITE 2 BC3 5 TYR A 190 SITE 1 BC4 7 ARG A 85 ASN A 154 ASP A 155 PHE A 156 SITE 2 BC4 7 ILE A 339 SER A 341 HOH A 707 SITE 1 BC5 6 GLY A 132 VAL A 133 ASP A 134 ARG A 302 SITE 2 BC5 6 SO4 A 476 HOH A 534 SITE 1 BC6 7 TRP A 83 SER A 87 SER A 439 LEU A 440 SITE 2 BC6 7 PRO A 442 HOH A 643 HOH A 659 SITE 1 BC7 4 THR A 263 TYR A 346 ASP A 353 HOH A 709 SITE 1 BC8 4 ILE A 69 TYR A 171 ARG A 447 HOH A 602 SITE 1 BC9 6 GLU A 160 ASP A 161 ARG A 164 ASP A 318 SITE 2 BC9 6 SO4 A 474 HOH A 586 SITE 1 CC1 4 ASN A 255 ARG A 331 GLU A 336 GLU A 337 SITE 1 CC2 4 ASP A 103 HIS A 106 ASP A 107 HOH A 547 SITE 1 CC3 8 HIS A 197 VAL A 201 LEU A 396 SER A 439 SITE 2 CC3 8 LEU A 440 PRO A 442 HOH A 640 HOH A 700 SITE 1 CC4 5 ARG A 207 VAL A 214 HIS A 215 GLU A 389 SITE 2 CC4 5 HOH A 666 SITE 1 CC5 4 GLN A 125 ARG A 164 ASP A 277 HOH A 648 SITE 1 CC6 5 ALA A 124 GLN A 125 ARG A 127 ARG A 188 SITE 2 CC6 5 ASP A 279 CRYST1 97.344 97.344 155.487 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010273 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010273 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006431 0.00000 MASTER 412 0 36 21 22 0 37 6 0 0 0 37 END