HEADER SIGNALING PROTEIN 31-MAR-10 3MEM TITLE CRYSTAL STRUCTURE OF A PUTATIVE SIGNAL TRANSDUCTION PROTEIN TITLE 2 (MAQU_0641) FROM MARINOBACTER AQUAEOLEI VT8 AT 2.25 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE SIGNAL TRANSDUCTION PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MARINOBACTER AQUAEOLEI; SOURCE 3 ORGANISM_COMMON: MARINOBACTER HYDROCARBONOCLASTICUS (STRAIN DSM SOURCE 4 11845); SOURCE 5 ORGANISM_TAXID: 351348; SOURCE 6 STRAIN: ATCC 700491 / DSM 11845 / VT8; SOURCE 7 GENE: MAQU_0641; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI-2, HDOD DOMAIN, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 17-JUL-19 3MEM 1 REMARK LINK REVDAT 3 25-OCT-17 3MEM 1 REMARK REVDAT 2 13-JUL-11 3MEM 1 VERSN REVDAT 1 19-MAY-10 3MEM 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE SIGNAL TRANSDUCTION PROTEIN JRNL TITL 2 (MAQU_0641) FROM MARINOBACTER AQUAEOLEI VT8 AT 2.25 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.13 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 26590 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1339 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1809 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.39 REMARK 3 BIN R VALUE (WORKING SET) : 0.3010 REMARK 3 BIN FREE R VALUE SET COUNT : 97 REMARK 3 BIN FREE R VALUE : 0.3570 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3511 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 280 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.48000 REMARK 3 B22 (A**2) : -0.23000 REMARK 3 B33 (A**2) : 2.71000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.269 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.204 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.149 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.900 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3673 ; 0.016 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2485 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4987 ; 1.563 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6039 ; 1.043 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 474 ; 4.883 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 178 ;34.860 ;23.539 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 620 ;15.380 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;14.723 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 559 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4149 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 741 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2300 ; 1.914 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 931 ; 0.433 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3667 ; 3.412 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1373 ; 5.983 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1309 ; 8.135 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 145 REMARK 3 ORIGIN FOR THE GROUP (A): 130.6905 28.8089 17.6126 REMARK 3 T TENSOR REMARK 3 T11: 0.0275 T22: 0.1094 REMARK 3 T33: 0.0304 T12: -0.0042 REMARK 3 T13: -0.0092 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 1.7824 L22: 0.8542 REMARK 3 L33: 1.5372 L12: -0.8588 REMARK 3 L13: 0.2308 L23: 0.0478 REMARK 3 S TENSOR REMARK 3 S11: 0.0231 S12: 0.3529 S13: 0.0148 REMARK 3 S21: -0.0832 S22: -0.0785 S23: 0.0490 REMARK 3 S31: -0.0118 S32: -0.0718 S33: 0.0554 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 146 A 454 REMARK 3 ORIGIN FOR THE GROUP (A): 128.4217 11.9686 47.8518 REMARK 3 T TENSOR REMARK 3 T11: 0.0263 T22: 0.0332 REMARK 3 T33: 0.0608 T12: -0.0120 REMARK 3 T13: -0.0169 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 1.7272 L22: 0.4256 REMARK 3 L33: 0.6786 L12: 0.3326 REMARK 3 L13: -0.2017 L23: -0.2308 REMARK 3 S TENSOR REMARK 3 S11: 0.0619 S12: -0.2259 S13: -0.1787 REMARK 3 S21: 0.0201 S22: -0.0562 S23: -0.0155 REMARK 3 S31: 0.0614 S32: -0.0015 S33: -0.0057 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 3. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. REMARK 3 4. FORMATE (FMT) AND ETHYLENE GLYCOL (EDO) MODELED WERE PRESENT REMARK 3 IN CRYSTALLIZATION OR CRYO CONDITIONS. 5. REGIONS OF POOR REMARK 3 ELECTRON DENSITY:20-28,113-121, 197-203,226-236. MODEL AT THOSE REMARK 3 REGIONS IS NOT RELIABLE. REMARK 4 REMARK 4 3MEM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000058448. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JAN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97911 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, TOROID REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26590 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 32.126 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.49100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2000M NAFORMATE, 20.0000% PEG-3350, REMARK 280 NO BUFFER PH 7.2, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 74.33500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.53500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 74.33500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 26.53500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE REMARK 300 ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE IN REMARK 300 SOLUTION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 C FMT A 460 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 490 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 GLY A 455 REMARK 465 GLY A 456 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 2 CG CD OE1 OE2 REMARK 470 GLN A 25 CG CD OE1 NE2 REMARK 470 ILE A 26 CG1 CG2 CD1 REMARK 470 ASP A 27 CG OD1 OD2 REMARK 470 GLU A 116 CG CD OE1 OE2 REMARK 470 VAL A 198 CG1 CG2 REMARK 470 VAL A 203 CG1 CG2 REMARK 470 ARG A 235 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 454 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 27 137.05 -30.91 REMARK 500 ASP A 152 14.93 -140.16 REMARK 500 PRO A 200 70.31 -115.58 REMARK 500 ALA A 202 -158.49 -157.79 REMARK 500 GLN A 300 16.19 -142.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 457 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 458 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 459 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 461 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 462 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 463 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 464 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 403195 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3MEM A 1 456 UNP A1TYC0 A1TYC0_MARAV 1 456 SEQADV 3MEM GLY A 0 UNP A1TYC0 LEADER SEQUENCE SEQRES 1 A 457 GLY MSE GLU LEU PRO VAL VAL VAL GLN GLN ALA LEU GLY SEQRES 2 A 457 ASP ASN ALA PRO GLY VAL SER PHE ARG SER VAL SER GLN SEQRES 3 A 457 ILE ASP THR GLY HIS LEU LEU ARG MSE VAL LEU LEU SER SEQRES 4 A 457 ASP ASP GLN GLY ASN LEU GLN ALA ILE CYS ARG ARG ASN SEQRES 5 A 457 ASP MSE LEU ASP LEU GLU ALA LEU ASN LYS ARG LEU GLY SEQRES 6 A 457 ARG ASP LEU ARG MSE MSE GLN ARG ARG GLU GLN VAL ARG SEQRES 7 A 457 VAL ARG GLN LYS ALA GLY LEU GLN GLU LEU PRO ALA LEU SEQRES 8 A 457 PRO SER LEU THR GLY TRP PRO THR VAL VAL ASP ARG ARG SEQRES 9 A 457 VAL ASP GLU LEU GLU ALA VAL ALA LEU GLU LEU GLY GLU SEQRES 10 A 457 GLN ASP LEU GLY LEU MSE MSE PRO ALA GLU ASP PHE ARG SEQRES 11 A 457 GLN LEU THR ALA LYS ALA ALA ARG HIS ASP PHE ALA VAL SEQRES 12 A 457 ASP THR ALA ASN ILE SER VAL ASN LEU ASP ASN HIS ALA SEQRES 13 A 457 ALA ASP ARG ASP GLN LEU HIS SER ALA ILE LYS ARG PHE SEQRES 14 A 457 THR GLY LEU ARG ILE GLN GLN ARG LEU GLU ASP THR LEU SEQRES 15 A 457 GLU LEU PRO PRO LEU PRO GLU THR ALA GLN ARG ILE ILE SEQRES 16 A 457 HIS LEU ARG VAL ASN PRO ASN ALA VAL MSE GLY ASP LEU SEQRES 17 A 457 VAL ASP VAL VAL GLU SER ASP PRO SER LEU ALA ALA GLN SEQRES 18 A 457 VAL VAL SER TRP ALA SER SER SER PHE TYR ALA ALA ALA SEQRES 19 A 457 GLY ARG VAL HIS SER VAL HIS ASP ALA VAL SER ARG VAL SEQRES 20 A 457 LEU GLY PHE ASP LEU VAL MSE ASN LEU ALA MSE GLY LEU SEQRES 21 A 457 ALA LEU GLY ARG ALA LEU LYS HIS PRO GLN ASP HIS PRO SEQRES 22 A 457 ASP GLY TYR VAL ASP TYR TRP GLN GLN ALA ILE TRP GLN SEQRES 23 A 457 ALA GLN SER ALA GLY ILE LEU ALA SER MSE MSE PRO ARG SEQRES 24 A 457 GLY GLN ARG PRO LEU PHE GLY LEU ALA TYR LEU ALA GLY SEQRES 25 A 457 LEU LEU HIS ASN PHE GLY HIS LEU VAL LEU ALA GLN VAL SEQRES 26 A 457 PHE PRO PRO HIS PHE LYS LEU VAL CYS ARG SER LEU GLU SEQRES 27 A 457 VAL SER PRO HIS ILE ASP SER SER VAL ILE GLU HIS TYR SEQRES 28 A 457 LEU LEU GLY ILE THR ARG GLU GLN ILE ALA ALA GLN LEU SEQRES 29 A 457 MSE GLU ASN TRP GLY MSE PRO ASP GLU VAL THR LEU ALA SEQRES 30 A 457 ILE ARG TYR GLN LYS ASN PRO ALA TYR ASP GLY PRO HIS SEQRES 31 A 457 ASN VAL TYR ALA ARG LEU LEU TRP LEU GLY ARG GLN LEU SEQRES 32 A 457 LEU THR GLU ARG GLY VAL ALA LEU GLY ALA GLY GLU SER SEQRES 33 A 457 ALA THR GLN ALA VAL TYR ASP GLU LEU GLY LEU ASP ARG SEQRES 34 A 457 GLU LEU VAL GLN GLU GLN PHE ASP GLU LEU VAL ARG ARG SEQRES 35 A 457 LYS ASP SER ILE MSE ALA MSE ALA GLY MSE MSE SER GLN SEQRES 36 A 457 GLY GLY MODRES 3MEM MSE A 34 MET SELENOMETHIONINE MODRES 3MEM MSE A 53 MET SELENOMETHIONINE MODRES 3MEM MSE A 69 MET SELENOMETHIONINE MODRES 3MEM MSE A 70 MET SELENOMETHIONINE MODRES 3MEM MSE A 122 MET SELENOMETHIONINE MODRES 3MEM MSE A 123 MET SELENOMETHIONINE MODRES 3MEM MSE A 204 MET SELENOMETHIONINE MODRES 3MEM MSE A 253 MET SELENOMETHIONINE MODRES 3MEM MSE A 257 MET SELENOMETHIONINE MODRES 3MEM MSE A 295 MET SELENOMETHIONINE MODRES 3MEM MSE A 296 MET SELENOMETHIONINE MODRES 3MEM MSE A 364 MET SELENOMETHIONINE MODRES 3MEM MSE A 369 MET SELENOMETHIONINE MODRES 3MEM MSE A 446 MET SELENOMETHIONINE MODRES 3MEM MSE A 448 MET SELENOMETHIONINE MODRES 3MEM MSE A 451 MET SELENOMETHIONINE MODRES 3MEM MSE A 452 MET SELENOMETHIONINE HET MSE A 34 8 HET MSE A 53 8 HET MSE A 69 13 HET MSE A 70 8 HET MSE A 122 8 HET MSE A 123 8 HET MSE A 204 8 HET MSE A 253 8 HET MSE A 257 8 HET MSE A 295 8 HET MSE A 296 8 HET MSE A 364 8 HET MSE A 369 8 HET MSE A 446 8 HET MSE A 448 13 HET MSE A 451 8 HET MSE A 452 8 HET FMT A 457 3 HET FMT A 458 3 HET FMT A 459 3 HET FMT A 460 3 HET FMT A 461 3 HET FMT A 462 3 HET EDO A 463 4 HET EDO A 464 4 HETNAM MSE SELENOMETHIONINE HETNAM FMT FORMIC ACID HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 17(C5 H11 N O2 SE) FORMUL 2 FMT 6(C H2 O2) FORMUL 8 EDO 2(C2 H6 O2) FORMUL 10 HOH *280(H2 O) HELIX 1 1 PRO A 4 GLY A 12 1 9 HELIX 2 2 ASP A 27 HIS A 30 5 4 HELIX 3 3 ASP A 55 GLY A 64 1 10 HELIX 4 4 GLN A 71 GLY A 83 1 13 HELIX 5 5 LEU A 90 THR A 94 5 5 HELIX 6 6 ARG A 102 LEU A 107 1 6 HELIX 7 7 ALA A 125 THR A 132 1 8 HELIX 8 8 ASP A 143 ILE A 147 5 5 HELIX 9 9 ASN A 153 ALA A 155 5 3 HELIX 10 10 ALA A 156 THR A 169 1 14 HELIX 11 11 ARG A 176 LEU A 181 1 6 HELIX 12 12 PRO A 187 ASN A 199 1 13 HELIX 13 13 VAL A 203 ASP A 214 1 12 HELIX 14 14 ASP A 214 SER A 227 1 14 HELIX 15 15 TYR A 230 GLY A 234 5 5 HELIX 16 16 SER A 238 ARG A 245 1 8 HELIX 17 17 GLY A 248 ARG A 263 1 16 HELIX 18 18 ASP A 277 MSE A 296 1 20 HELIX 19 19 PRO A 297 ARG A 301 5 5 HELIX 20 20 LEU A 303 HIS A 314 1 12 HELIX 21 21 PHE A 316 PHE A 325 1 10 HELIX 22 22 PHE A 325 SER A 339 1 15 HELIX 23 23 ASP A 343 GLY A 353 1 11 HELIX 24 24 THR A 355 TRP A 367 1 13 HELIX 25 25 PRO A 370 GLN A 380 1 11 HELIX 26 26 HIS A 389 ARG A 406 1 18 HELIX 27 27 THR A 417 LEU A 424 1 8 HELIX 28 28 ASP A 427 ARG A 441 1 15 HELIX 29 29 ARG A 441 GLN A 454 1 14 SHEET 1 A 3 SER A 19 SER A 22 0 SHEET 2 A 3 LEU A 119 PRO A 124 -1 O MSE A 122 N SER A 19 SHEET 3 A 3 ALA A 109 GLU A 113 -1 N LEU A 112 O LEU A 121 SHEET 1 B 5 ARG A 68 MSE A 69 0 SHEET 2 B 5 LEU A 32 ASP A 39 -1 N SER A 38 O ARG A 68 SHEET 3 B 5 GLY A 42 ARG A 49 -1 O LEU A 44 N LEU A 37 SHEET 4 B 5 THR A 98 ASP A 101 1 O VAL A 99 N ILE A 47 SHEET 5 B 5 ALA A 136 HIS A 138 1 O ALA A 136 N VAL A 100 SHEET 1 C 2 MSE A 53 LEU A 54 0 SHEET 2 C 2 ALA A 141 VAL A 142 -1 O VAL A 142 N MSE A 53 LINK C ARG A 33 N MSE A 34 1555 1555 1.32 LINK C MSE A 34 N VAL A 35 1555 1555 1.32 LINK C ASP A 52 N MSE A 53 1555 1555 1.33 LINK C MSE A 53 N LEU A 54 1555 1555 1.33 LINK C ARG A 68 N MSE A 69 1555 1555 1.32 LINK C MSE A 69 N MSE A 70 1555 1555 1.33 LINK C MSE A 70 N GLN A 71 1555 1555 1.33 LINK C LEU A 121 N MSE A 122 1555 1555 1.32 LINK C MSE A 122 N MSE A 123 1555 1555 1.32 LINK C MSE A 123 N PRO A 124 1555 1555 1.33 LINK C VAL A 203 N MSE A 204 1555 1555 1.33 LINK C MSE A 204 N GLY A 205 1555 1555 1.33 LINK C VAL A 252 N MSE A 253 1555 1555 1.32 LINK C MSE A 253 N ASN A 254 1555 1555 1.33 LINK C ALA A 256 N MSE A 257 1555 1555 1.33 LINK C MSE A 257 N GLY A 258 1555 1555 1.32 LINK C SER A 294 N MSE A 295 1555 1555 1.33 LINK C MSE A 295 N MSE A 296 1555 1555 1.32 LINK C MSE A 296 N PRO A 297 1555 1555 1.35 LINK C LEU A 363 N MSE A 364 1555 1555 1.33 LINK C MSE A 364 N GLU A 365 1555 1555 1.33 LINK C GLY A 368 N MSE A 369 1555 1555 1.32 LINK C MSE A 369 N PRO A 370 1555 1555 1.34 LINK C ILE A 445 N MSE A 446 1555 1555 1.33 LINK C MSE A 446 N ALA A 447 1555 1555 1.33 LINK C ALA A 447 N MSE A 448 1555 1555 1.33 LINK C MSE A 448 N ALA A 449 1555 1555 1.32 LINK C GLY A 450 N MSE A 451 1555 1555 1.32 LINK C MSE A 451 N MSE A 452 1555 1555 1.34 LINK C MSE A 452 N SER A 453 1555 1555 1.34 SITE 1 AC1 2 GLY A 411 HOH A 631 SITE 1 AC2 2 ARG A 62 HOH A 484 SITE 1 AC3 3 LEU A 351 LEU A 352 GLY A 353 SITE 1 AC4 2 HIS A 267 PRO A 268 SITE 1 AC5 3 HIS A 30 MSE A 122 PRO A 215 SITE 1 AC6 6 LEU A 131 THR A 132 ALA A 133 LYS A 134 SITE 2 AC6 6 ALA A 135 HOH A 603 SITE 1 AC7 1 ARG A 129 CRYST1 148.670 53.070 69.560 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006726 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018843 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014376 0.00000 MASTER 380 0 25 29 10 0 8 6 0 0 0 36 END