HEADER HYDROLASE/ANTIBIOTIC 16-MAR-10 3M6R TITLE CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA PEPTIDE DEFORMYLASE 1B TITLE 2 (ATPDF1B) G41M MUTANT IN COMPLEX WITH ACTINONIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDE DEFORMYLASE 1B; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: RESIDUES 1-193; COMPND 5 SYNONYM: PDF 1B, ATPDF1B, ATDEF2, POLYPEPTIDE DEFORMYLASE; COMPND 6 EC: 3.5.1.88; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE-CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: DEF; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: JM101TR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE60 KEYWDS PEPTIDE DEFORMYLASE, 1B, PDF, N-TERMINAL EXCISION PATHWAY, NME, KEYWDS 2 ARABIDOPSIS THALIANA, INDUCED-FIT, HYDROLASE, METAL-BINDING, KEYWDS 3 MITOCHONDRION, PROTEIN BIOSYNTHESIS, TRANSIT PEPTIDE, HYDROLASE- KEYWDS 4 ANTIBIOTIC COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.FIEULAINE,T.MEINNEL,C.GIGLIONE REVDAT 3 21-MAR-12 3M6R 1 JRNL VERSN REVDAT 2 08-JUN-11 3M6R 1 JRNL REVDAT 1 30-MAR-11 3M6R 0 JRNL AUTH S.FIEULAINE,A.BOULAROT,I.ARTAUD,M.DESMADRIL,F.DARDEL, JRNL AUTH 2 T.MEINNEL,C.GIGLIONE JRNL TITL TRAPPING CONFORMATIONAL STATES ALONG LIGAND-BINDING DYNAMICS JRNL TITL 2 OF PEPTIDE DEFORMYLASE: THE IMPACT OF INDUCED FIT ON ENZYME JRNL TITL 3 CATALYSIS JRNL REF PLOS BIOL. V. 9 01066 2011 JRNL REFN ISSN 1544-9173 JRNL PMID 21629676 JRNL DOI 10.1371/JOURNAL.PBIO.1001066 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.15 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1872314.990 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 33128 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.293 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1643 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5121 REMARK 3 BIN R VALUE (WORKING SET) : 0.3250 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 253 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.018 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5587 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 127 REMARK 3 SOLVENT ATOMS : 464 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.58000 REMARK 3 B22 (A**2) : -0.90000 REMARK 3 B33 (A**2) : -1.67000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM SIGMAA (A) : 0.36 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.33 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.30 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.02 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.32 REMARK 3 BSOL : 50.54 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : ACTINONINE-NEW.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : ACTINONINE-NEW.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3M6R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-APR-10. REMARK 100 THE RCSB ID CODE IS RCSB058178. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.873 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33143 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05700 REMARK 200 FOR THE DATA SET : 21.2800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.42000 REMARK 200 FOR SHELL : 4.690 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC 5.2.0019 REMARK 200 STARTING MODEL: PDB ENTRY 3M6O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG-3350, 0.1M ZINC ACETATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.32000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 94.84500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.36500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 94.84500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.32000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.36500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 181 REMARK 465 GLN A 182 REMARK 465 LYS A 183 REMARK 465 ARG A 184 REMARK 465 LYS A 185 REMARK 465 ALA A 186 REMARK 465 GLY A 187 REMARK 465 VAL A 188 REMARK 465 GLY A 189 REMARK 465 PHE A 190 REMARK 465 GLY A 191 REMARK 465 LYS A 192 REMARK 465 ARG A 193 REMARK 465 ARG B 181 REMARK 465 GLN B 182 REMARK 465 LYS B 183 REMARK 465 ARG B 184 REMARK 465 LYS B 185 REMARK 465 ALA B 186 REMARK 465 GLY B 187 REMARK 465 VAL B 188 REMARK 465 GLY B 189 REMARK 465 PHE B 190 REMARK 465 GLY B 191 REMARK 465 LYS B 192 REMARK 465 ARG B 193 REMARK 465 ARG C 181 REMARK 465 GLN C 182 REMARK 465 LYS C 183 REMARK 465 ARG C 184 REMARK 465 LYS C 185 REMARK 465 ALA C 186 REMARK 465 GLY C 187 REMARK 465 VAL C 188 REMARK 465 GLY C 189 REMARK 465 PHE C 190 REMARK 465 GLY C 191 REMARK 465 LYS C 192 REMARK 465 ARG C 193 REMARK 465 ARG D 181 REMARK 465 GLN D 182 REMARK 465 LYS D 183 REMARK 465 ARG D 184 REMARK 465 LYS D 185 REMARK 465 ALA D 186 REMARK 465 GLY D 187 REMARK 465 VAL D 188 REMARK 465 GLY D 189 REMARK 465 PHE D 190 REMARK 465 GLY D 191 REMARK 465 LYS D 192 REMARK 465 ARG D 193 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 14 CG CD CE NZ REMARK 470 LYS A 16 CG CD CE NZ REMARK 470 GLU A 23 CG CD OE1 OE2 REMARK 470 LYS A 26 CG CD CE NZ REMARK 470 LYS A 76 CG CD CE NZ REMARK 470 GLU A 117 CG CD OE1 OE2 REMARK 470 ARG A 118 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 125 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 168 CG CD OE1 OE2 REMARK 470 LYS A 169 CG CD CE NZ REMARK 470 GLU B 2 CG CD OE1 OE2 REMARK 470 ARG B 17 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 23 CG CD OE1 OE2 REMARK 470 LYS B 26 CG CD CE NZ REMARK 470 LYS B 76 CG CD CE NZ REMARK 470 LYS B 78 CG CD CE NZ REMARK 470 LYS B 79 CG CD CE NZ REMARK 470 LYS B 83 CG CD CE NZ REMARK 470 GLU B 100 CG CD OE1 OE2 REMARK 470 GLN B 105 CG CD OE1 NE2 REMARK 470 LYS B 108 CG CD CE NZ REMARK 470 GLU B 117 CG CD OE1 OE2 REMARK 470 ARG B 125 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 149 CG OD1 OD2 REMARK 470 GLN B 150 CG CD OE1 NE2 REMARK 470 LYS C 16 CG CD CE NZ REMARK 470 ARG C 17 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 23 CG CD OE1 OE2 REMARK 470 LYS C 26 CG CD CE NZ REMARK 470 LYS C 76 CG CD CE NZ REMARK 470 ARG C 118 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 125 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 169 CG CD CE NZ REMARK 470 LYS D 14 CG CD CE NZ REMARK 470 ARG D 17 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 23 CG CD OE1 OE2 REMARK 470 LYS D 78 CG CD CE NZ REMARK 470 LYS D 79 CG CD CE NZ REMARK 470 LYS D 83 CG CD CE NZ REMARK 470 LYS D 108 CG CD CE NZ REMARK 470 GLU D 117 CG CD OE1 OE2 REMARK 470 ARG D 125 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 150 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 157 O HOH B 448 1.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 7 31.53 -96.20 REMARK 500 PHE A 21 71.92 -112.36 REMARK 500 ASP A 22 -157.27 -103.30 REMARK 500 PHE A 87 139.54 -170.20 REMARK 500 ARG A 125 -141.57 49.22 REMARK 500 PRO B 7 34.40 -97.41 REMARK 500 PRO B 9 -7.36 -53.72 REMARK 500 ILE B 77 142.54 -11.73 REMARK 500 ILE B 121 172.13 177.00 REMARK 500 ARG B 125 -141.41 49.48 REMARK 500 LEU B 138 -5.02 -58.87 REMARK 500 MET B 147 154.83 -31.99 REMARK 500 PRO C 7 32.33 -98.97 REMARK 500 LYS C 79 135.64 -172.89 REMARK 500 PRO C 95 119.56 -39.76 REMARK 500 ILE C 114 23.89 -69.99 REMARK 500 THR C 115 -30.15 -133.58 REMARK 500 ARG C 125 -139.13 42.38 REMARK 500 LYS C 169 -85.05 -52.73 REMARK 500 PRO D 7 51.88 -103.93 REMARK 500 PRO D 9 -8.21 -56.87 REMARK 500 ARG D 125 -157.41 50.80 REMARK 500 MET D 147 156.10 -37.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 PHE A 143 24.3 L L OUTSIDE RANGE REMARK 500 PHE C 143 24.7 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 233 DISTANCE = 5.13 ANGSTROMS REMARK 525 HOH A 239 DISTANCE = 6.34 ANGSTROMS REMARK 525 HOH A 267 DISTANCE = 5.32 ANGSTROMS REMARK 525 HOH A 269 DISTANCE = 5.22 ANGSTROMS REMARK 525 HOH A 373 DISTANCE = 5.22 ANGSTROMS REMARK 525 HOH A 376 DISTANCE = 7.47 ANGSTROMS REMARK 525 HOH A 378 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A 459 DISTANCE = 6.84 ANGSTROMS REMARK 525 HOH B 202 DISTANCE = 5.63 ANGSTROMS REMARK 525 HOH B 204 DISTANCE = 5.14 ANGSTROMS REMARK 525 HOH B 212 DISTANCE = 5.05 ANGSTROMS REMARK 525 HOH B 214 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH B 219 DISTANCE = 7.38 ANGSTROMS REMARK 525 HOH B 221 DISTANCE = 6.80 ANGSTROMS REMARK 525 HOH B 226 DISTANCE = 5.21 ANGSTROMS REMARK 525 HOH B 243 DISTANCE = 7.27 ANGSTROMS REMARK 525 HOH B 265 DISTANCE = 5.68 ANGSTROMS REMARK 525 HOH B 268 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B 271 DISTANCE = 6.47 ANGSTROMS REMARK 525 HOH B 292 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH B 452 DISTANCE = 5.30 ANGSTROMS REMARK 525 HOH B 460 DISTANCE = 5.02 ANGSTROMS REMARK 525 HOH B 461 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH C 245 DISTANCE = 5.12 ANGSTROMS REMARK 525 HOH C 248 DISTANCE = 5.17 ANGSTROMS REMARK 525 HOH C 251 DISTANCE = 5.63 ANGSTROMS REMARK 525 HOH C 253 DISTANCE = 5.66 ANGSTROMS REMARK 525 HOH C 279 DISTANCE = 5.25 ANGSTROMS REMARK 525 HOH C 291 DISTANCE = 5.41 ANGSTROMS REMARK 525 HOH C 297 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH C 409 DISTANCE = 5.25 ANGSTROMS REMARK 525 HOH C 417 DISTANCE = 5.15 ANGSTROMS REMARK 525 HOH C 419 DISTANCE = 5.45 ANGSTROMS REMARK 525 HOH C 420 DISTANCE = 7.57 ANGSTROMS REMARK 525 HOH C 423 DISTANCE = 7.10 ANGSTROMS REMARK 525 HOH C 462 DISTANCE = 7.54 ANGSTROMS REMARK 525 HOH C 463 DISTANCE = 6.95 ANGSTROMS REMARK 525 HOH C 469 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH D 279 DISTANCE = 7.64 ANGSTROMS REMARK 525 HOH D 334 DISTANCE = 5.47 ANGSTROMS REMARK 525 HOH D 335 DISTANCE = 6.52 ANGSTROMS REMARK 525 HOH D 359 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH D 360 DISTANCE = 5.34 ANGSTROMS REMARK 525 HOH D 363 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH D 471 DISTANCE = 5.29 ANGSTROMS REMARK 525 HOH D 475 DISTANCE = 6.41 ANGSTROMS REMARK 525 HOH D 476 DISTANCE = 5.42 ANGSTROMS REMARK 525 HOH D 483 DISTANCE = 5.98 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 197 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 160 OE1 REMARK 620 2 GLU B 179 OE2 89.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 198 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 69 OE1 REMARK 620 2 ASP B 34 OD1 80.4 REMARK 620 3 ASP B 30 OD2 131.4 97.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 195 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 BB2 D 194 O2 REMARK 620 2 HIS D 137 NE2 73.1 REMARK 620 3 CYS D 91 SG 153.1 104.4 REMARK 620 4 HIS D 133 NE2 94.8 96.3 112.0 REMARK 620 5 BB2 D 194 O4 67.7 139.5 105.8 96.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 195 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 133 NE2 REMARK 620 2 HIS A 137 NE2 116.0 REMARK 620 3 CYS A 91 SG 107.9 95.3 REMARK 620 4 BB2 A 194 O4 101.3 131.9 101.3 REMARK 620 5 BB2 A 194 O2 98.3 79.1 152.8 65.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 197 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 34 OD2 REMARK 620 2 ASP A 34 OD1 104.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 195 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 BB2 B 194 O2 REMARK 620 2 HIS B 137 NE2 81.6 REMARK 620 3 CYS B 91 SG 161.0 93.7 REMARK 620 4 HIS B 133 NE2 94.9 105.0 104.1 REMARK 620 5 BB2 B 194 O4 68.6 145.9 109.1 94.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 196 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 69 OE1 REMARK 620 2 ASP A 30 OD2 149.2 REMARK 620 3 ASP A 34 OD2 87.4 99.8 REMARK 620 4 ASP A 30 OD1 97.7 54.0 83.9 REMARK 620 5 GLU B 69 OE2 52.6 115.0 140.0 100.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 195 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 133 NE2 REMARK 620 2 HIS C 137 NE2 117.7 REMARK 620 3 BB2 C 194 O4 101.7 132.7 REMARK 620 4 CYS C 91 SG 108.7 94.9 96.0 REMARK 620 5 BB2 C 194 O2 101.0 80.6 66.6 148.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 196 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 34 OD1 REMARK 620 2 ASP C 30 OD2 114.5 REMARK 620 3 ASP C 30 OD1 79.8 53.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 196 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 34 OD1 REMARK 620 2 ASP D 30 OD2 114.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 198 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 157 OE2 REMARK 620 2 GLU D 179 OE1 145.1 REMARK 620 3 HOH D 467 O 92.9 106.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 199 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 40 OD2 REMARK 620 2 HOH A 264 O 105.5 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BB2 A 194 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 195 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 196 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 197 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 198 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 199 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BB2 B 194 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 195 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 196 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 197 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 198 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BB2 C 194 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 195 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 196 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 197 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 198 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 199 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BB2 D 194 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 195 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 196 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 198 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 199 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3M6O RELATED DB: PDB REMARK 900 ATPDF1B REMARK 900 RELATED ID: 3M6P RELATED DB: PDB REMARK 900 ATPDF1B IN COMPLEX WITH ACTINONIN REMARK 900 RELATED ID: 3M6Q RELATED DB: PDB REMARK 900 ATPDF1B G41Q MUTANT IN COMPLEX WITH ACTINONIN DBREF 3M6R A 3 193 UNP Q9FUZ2 DEF1B_ARATH 83 273 DBREF 3M6R B 3 193 UNP Q9FUZ2 DEF1B_ARATH 83 273 DBREF 3M6R C 3 193 UNP Q9FUZ2 DEF1B_ARATH 83 273 DBREF 3M6R D 3 193 UNP Q9FUZ2 DEF1B_ARATH 83 273 SEQADV 3M6R MET A 1 UNP Q9FUZ2 CLONING ARTIFACT SEQADV 3M6R GLU A 2 UNP Q9FUZ2 CLONING ARTIFACT SEQADV 3M6R MET A 41 UNP Q9FUZ2 GLY 121 ENGINEERED MUTATION SEQADV 3M6R MET B 1 UNP Q9FUZ2 CLONING ARTIFACT SEQADV 3M6R GLU B 2 UNP Q9FUZ2 CLONING ARTIFACT SEQADV 3M6R MET B 41 UNP Q9FUZ2 GLY 121 ENGINEERED MUTATION SEQADV 3M6R MET C 1 UNP Q9FUZ2 CLONING ARTIFACT SEQADV 3M6R GLU C 2 UNP Q9FUZ2 CLONING ARTIFACT SEQADV 3M6R MET C 41 UNP Q9FUZ2 GLY 121 ENGINEERED MUTATION SEQADV 3M6R MET D 1 UNP Q9FUZ2 CLONING ARTIFACT SEQADV 3M6R GLU D 2 UNP Q9FUZ2 CLONING ARTIFACT SEQADV 3M6R MET D 41 UNP Q9FUZ2 GLY 121 ENGINEERED MUTATION SEQRES 1 A 193 MET GLU ILE VAL GLU TYR PRO ASP PRO ILE LEU ARG ALA SEQRES 2 A 193 LYS ASN LYS ARG ILE ASP ILE PHE ASP GLU ASN LEU LYS SEQRES 3 A 193 ASN LEU VAL ASP ALA MET PHE ASP VAL MET TYR LYS THR SEQRES 4 A 193 ASP MET ILE GLY LEU SER ALA PRO GLN VAL GLY LEU ASN SEQRES 5 A 193 VAL GLN LEU MET VAL PHE ASN PRO ALA GLY GLU PRO GLY SEQRES 6 A 193 GLU GLY LYS GLU ILE VAL LEU VAL ASN PRO LYS ILE LYS SEQRES 7 A 193 LYS TYR SER ASP LYS LEU VAL PRO PHE ASP GLU GLY CYS SEQRES 8 A 193 LEU SER PHE PRO GLY ILE TYR ALA GLU VAL VAL ARG PRO SEQRES 9 A 193 GLN SER VAL LYS ILE ASP ALA ARG ASP ILE THR GLY GLU SEQRES 10 A 193 ARG PHE SER ILE SER LEU SER ARG LEU PRO ALA ARG ILE SEQRES 11 A 193 PHE GLN HIS GLU TYR ASP HIS LEU GLU GLY VAL LEU PHE SEQRES 12 A 193 PHE ASP ARG MET THR ASP GLN VAL LEU ASP SER ILE ARG SEQRES 13 A 193 GLU GLU LEU GLU ALA LEU GLU LYS LYS TYR GLU GLU LYS SEQRES 14 A 193 THR GLY LEU PRO SER PRO GLU ARG VAL GLU ALA ARG GLN SEQRES 15 A 193 LYS ARG LYS ALA GLY VAL GLY PHE GLY LYS ARG SEQRES 1 B 193 MET GLU ILE VAL GLU TYR PRO ASP PRO ILE LEU ARG ALA SEQRES 2 B 193 LYS ASN LYS ARG ILE ASP ILE PHE ASP GLU ASN LEU LYS SEQRES 3 B 193 ASN LEU VAL ASP ALA MET PHE ASP VAL MET TYR LYS THR SEQRES 4 B 193 ASP MET ILE GLY LEU SER ALA PRO GLN VAL GLY LEU ASN SEQRES 5 B 193 VAL GLN LEU MET VAL PHE ASN PRO ALA GLY GLU PRO GLY SEQRES 6 B 193 GLU GLY LYS GLU ILE VAL LEU VAL ASN PRO LYS ILE LYS SEQRES 7 B 193 LYS TYR SER ASP LYS LEU VAL PRO PHE ASP GLU GLY CYS SEQRES 8 B 193 LEU SER PHE PRO GLY ILE TYR ALA GLU VAL VAL ARG PRO SEQRES 9 B 193 GLN SER VAL LYS ILE ASP ALA ARG ASP ILE THR GLY GLU SEQRES 10 B 193 ARG PHE SER ILE SER LEU SER ARG LEU PRO ALA ARG ILE SEQRES 11 B 193 PHE GLN HIS GLU TYR ASP HIS LEU GLU GLY VAL LEU PHE SEQRES 12 B 193 PHE ASP ARG MET THR ASP GLN VAL LEU ASP SER ILE ARG SEQRES 13 B 193 GLU GLU LEU GLU ALA LEU GLU LYS LYS TYR GLU GLU LYS SEQRES 14 B 193 THR GLY LEU PRO SER PRO GLU ARG VAL GLU ALA ARG GLN SEQRES 15 B 193 LYS ARG LYS ALA GLY VAL GLY PHE GLY LYS ARG SEQRES 1 C 193 MET GLU ILE VAL GLU TYR PRO ASP PRO ILE LEU ARG ALA SEQRES 2 C 193 LYS ASN LYS ARG ILE ASP ILE PHE ASP GLU ASN LEU LYS SEQRES 3 C 193 ASN LEU VAL ASP ALA MET PHE ASP VAL MET TYR LYS THR SEQRES 4 C 193 ASP MET ILE GLY LEU SER ALA PRO GLN VAL GLY LEU ASN SEQRES 5 C 193 VAL GLN LEU MET VAL PHE ASN PRO ALA GLY GLU PRO GLY SEQRES 6 C 193 GLU GLY LYS GLU ILE VAL LEU VAL ASN PRO LYS ILE LYS SEQRES 7 C 193 LYS TYR SER ASP LYS LEU VAL PRO PHE ASP GLU GLY CYS SEQRES 8 C 193 LEU SER PHE PRO GLY ILE TYR ALA GLU VAL VAL ARG PRO SEQRES 9 C 193 GLN SER VAL LYS ILE ASP ALA ARG ASP ILE THR GLY GLU SEQRES 10 C 193 ARG PHE SER ILE SER LEU SER ARG LEU PRO ALA ARG ILE SEQRES 11 C 193 PHE GLN HIS GLU TYR ASP HIS LEU GLU GLY VAL LEU PHE SEQRES 12 C 193 PHE ASP ARG MET THR ASP GLN VAL LEU ASP SER ILE ARG SEQRES 13 C 193 GLU GLU LEU GLU ALA LEU GLU LYS LYS TYR GLU GLU LYS SEQRES 14 C 193 THR GLY LEU PRO SER PRO GLU ARG VAL GLU ALA ARG GLN SEQRES 15 C 193 LYS ARG LYS ALA GLY VAL GLY PHE GLY LYS ARG SEQRES 1 D 193 MET GLU ILE VAL GLU TYR PRO ASP PRO ILE LEU ARG ALA SEQRES 2 D 193 LYS ASN LYS ARG ILE ASP ILE PHE ASP GLU ASN LEU LYS SEQRES 3 D 193 ASN LEU VAL ASP ALA MET PHE ASP VAL MET TYR LYS THR SEQRES 4 D 193 ASP MET ILE GLY LEU SER ALA PRO GLN VAL GLY LEU ASN SEQRES 5 D 193 VAL GLN LEU MET VAL PHE ASN PRO ALA GLY GLU PRO GLY SEQRES 6 D 193 GLU GLY LYS GLU ILE VAL LEU VAL ASN PRO LYS ILE LYS SEQRES 7 D 193 LYS TYR SER ASP LYS LEU VAL PRO PHE ASP GLU GLY CYS SEQRES 8 D 193 LEU SER PHE PRO GLY ILE TYR ALA GLU VAL VAL ARG PRO SEQRES 9 D 193 GLN SER VAL LYS ILE ASP ALA ARG ASP ILE THR GLY GLU SEQRES 10 D 193 ARG PHE SER ILE SER LEU SER ARG LEU PRO ALA ARG ILE SEQRES 11 D 193 PHE GLN HIS GLU TYR ASP HIS LEU GLU GLY VAL LEU PHE SEQRES 12 D 193 PHE ASP ARG MET THR ASP GLN VAL LEU ASP SER ILE ARG SEQRES 13 D 193 GLU GLU LEU GLU ALA LEU GLU LYS LYS TYR GLU GLU LYS SEQRES 14 D 193 THR GLY LEU PRO SER PRO GLU ARG VAL GLU ALA ARG GLN SEQRES 15 D 193 LYS ARG LYS ALA GLY VAL GLY PHE GLY LYS ARG HET BB2 A 194 27 HET ZN A 195 1 HET ZN A 196 1 HET ZN A 197 1 HET ZN A 198 1 HET ZN A 199 1 HET BB2 B 194 27 HET ZN B 195 1 HET ZN B 196 1 HET ZN B 197 1 HET ZN B 198 1 HET BB2 C 194 27 HET ZN C 195 1 HET ZN C 196 1 HET ZN C 197 1 HET ZN C 198 1 HET ZN C 199 1 HET BB2 D 194 27 HET ZN D 195 1 HET ZN D 196 1 HET ZN D 197 1 HET ZN D 198 1 HET ZN D 199 1 HETNAM BB2 ACTINONIN HETNAM ZN ZINC ION HETSYN BB2 2-[(FORMYL-HYDROXY-AMINO)-METHYL]-HEPTANOIC ACID [1-(2- HETSYN 2 BB2 HYDROXYMETHYL-PYRROLIDINE-1-CARBONYL)-2-METHYL- HETSYN 3 BB2 PROPYL]-AMIDE FORMUL 5 BB2 4(C19 H35 N3 O5) FORMUL 6 ZN 19(ZN 2+) FORMUL 28 HOH *464(H2 O) HELIX 1 1 ASP A 8 ARG A 12 5 5 HELIX 2 2 ASP A 22 THR A 39 1 18 HELIX 3 3 PRO A 47 GLY A 50 5 4 HELIX 4 4 SER A 124 GLU A 139 1 16 HELIX 5 5 LEU A 142 MET A 147 1 6 HELIX 6 6 THR A 148 SER A 154 1 7 HELIX 7 7 ILE A 155 GLY A 171 1 17 HELIX 8 8 ASP B 8 ARG B 12 5 5 HELIX 9 9 ASP B 22 THR B 39 1 18 HELIX 10 10 PRO B 47 GLY B 50 5 4 HELIX 11 11 SER B 124 LEU B 138 1 15 HELIX 12 12 LEU B 142 ARG B 146 5 5 HELIX 13 13 THR B 148 THR B 170 1 23 HELIX 14 14 ASP C 8 ARG C 12 5 5 HELIX 15 15 ASP C 22 THR C 39 1 18 HELIX 16 16 PRO C 47 GLY C 50 5 4 HELIX 17 17 SER C 124 GLU C 139 1 16 HELIX 18 18 LEU C 142 MET C 147 5 6 HELIX 19 19 THR C 148 SER C 154 1 7 HELIX 20 20 ILE C 155 THR C 170 1 16 HELIX 21 21 ASP D 8 ARG D 12 5 5 HELIX 22 22 ASP D 22 THR D 39 1 18 HELIX 23 23 PRO D 47 GLY D 50 5 4 HELIX 24 24 SER D 124 GLU D 139 1 16 HELIX 25 25 LEU D 142 ARG D 146 5 5 HELIX 26 26 THR D 148 THR D 170 1 23 SHEET 1 A 5 GLY A 43 SER A 45 0 SHEET 2 A 5 LEU A 55 PHE A 58 -1 O VAL A 57 N LEU A 44 SHEET 3 A 5 ILE A 70 TYR A 80 -1 O ILE A 70 N PHE A 58 SHEET 4 A 5 VAL A 107 ARG A 112 -1 O LYS A 108 N LYS A 79 SHEET 5 A 5 ARG A 118 LEU A 123 -1 O ILE A 121 N ILE A 109 SHEET 1 B 2 LEU A 84 GLU A 89 0 SHEET 2 B 2 ALA A 99 PRO A 104 -1 O ALA A 99 N GLU A 89 SHEET 1 C 3 GLY B 43 SER B 45 0 SHEET 2 C 3 LEU B 55 PHE B 58 -1 O VAL B 57 N LEU B 44 SHEET 3 C 3 ILE B 70 VAL B 73 -1 O ILE B 70 N PHE B 58 SHEET 1 D 3 LYS B 79 TYR B 80 0 SHEET 2 D 3 VAL B 107 ARG B 112 -1 O LYS B 108 N LYS B 79 SHEET 3 D 3 ARG B 118 LEU B 123 -1 O ILE B 121 N ILE B 109 SHEET 1 E 2 LEU B 84 CYS B 91 0 SHEET 2 E 2 PHE B 94 PRO B 104 -1 O ALA B 99 N GLU B 89 SHEET 1 F 5 GLY C 43 SER C 45 0 SHEET 2 F 5 LEU C 55 PHE C 58 -1 O VAL C 57 N LEU C 44 SHEET 3 F 5 ILE C 70 TYR C 80 -1 O ILE C 70 N PHE C 58 SHEET 4 F 5 VAL C 107 ARG C 112 -1 O LYS C 108 N LYS C 78 SHEET 5 F 5 ARG C 118 LEU C 123 -1 O ILE C 121 N ILE C 109 SHEET 1 G 2 LEU C 84 GLU C 89 0 SHEET 2 G 2 ALA C 99 PRO C 104 -1 O ARG C 103 N VAL C 85 SHEET 1 H 5 GLY D 43 SER D 45 0 SHEET 2 H 5 LEU D 55 PHE D 58 -1 O VAL D 57 N LEU D 44 SHEET 3 H 5 ILE D 70 TYR D 80 -1 O ILE D 70 N PHE D 58 SHEET 4 H 5 VAL D 107 ARG D 112 -1 O ARG D 112 N VAL D 73 SHEET 5 H 5 ARG D 118 LEU D 123 -1 O PHE D 119 N ALA D 111 SHEET 1 I 2 LEU D 84 VAL D 85 0 SHEET 2 I 2 ARG D 103 PRO D 104 -1 O ARG D 103 N VAL D 85 SHEET 1 J 2 ASP D 88 GLY D 90 0 SHEET 2 J 2 TYR D 98 GLU D 100 -1 O ALA D 99 N GLU D 89 LINK OE1 GLU C 158 ZN ZN C 199 1555 1555 2.01 LINK OE1 GLU B 160 ZN ZN B 197 1555 1555 2.10 LINK OE2 GLU B 179 ZN ZN B 197 1555 1555 2.17 LINK OE1 GLU A 69 ZN ZN B 198 1555 1555 2.17 LINK O2 BB2 D 194 ZN ZN D 195 1555 1555 2.20 LINK NE2 HIS A 133 ZN ZN A 195 1555 1555 2.21 LINK OD2 ASP B 34 ZN ZN A 197 1555 1555 2.21 LINK OD1 ASP B 34 ZN ZN B 198 1555 1555 2.22 LINK OD2 ASP B 30 ZN ZN B 198 1555 1555 2.23 LINK O2 BB2 B 194 ZN ZN B 195 1555 1555 2.23 LINK NE2 HIS B 137 ZN ZN B 195 1555 1555 2.25 LINK OE1 GLU B 69 ZN ZN A 196 1555 1555 2.25 LINK NE2 HIS A 137 ZN ZN A 195 1555 1555 2.26 LINK NE2 HIS D 137 ZN ZN D 195 1555 1555 2.27 LINK NE2 HIS C 133 ZN ZN C 195 1555 1555 2.27 LINK OD1 ASP C 34 ZN ZN C 196 1555 1555 2.27 LINK OD1 ASP A 34 ZN ZN A 197 1555 1555 2.29 LINK NE2 HIS C 137 ZN ZN C 195 1555 1555 2.30 LINK OD2 ASP A 30 ZN ZN A 196 1555 1555 2.30 LINK OD1 ASP D 34 ZN ZN D 196 1555 1555 2.31 LINK O4 BB2 C 194 ZN ZN C 195 1555 1555 2.32 LINK OE2 GLU D 157 ZN ZN D 198 1555 1555 2.33 LINK SG CYS D 91 ZN ZN D 195 1555 1555 2.35 LINK NE2 HIS D 133 ZN ZN D 195 1555 1555 2.35 LINK OD2 ASP C 30 ZN ZN C 196 1555 1555 2.37 LINK OD2 ASP D 30 ZN ZN D 196 1555 1555 2.38 LINK OD2 ASP A 34 ZN ZN A 196 1555 1555 2.38 LINK OD2 ASP A 40 ZN ZN A 199 1555 1555 2.38 LINK SG CYS A 91 ZN ZN A 195 1555 1555 2.41 LINK O4 BB2 A 194 ZN ZN A 195 1555 1555 2.41 LINK SG CYS B 91 ZN ZN B 195 1555 1555 2.42 LINK OE1 GLU D 179 ZN ZN D 198 1555 1555 2.47 LINK SG CYS C 91 ZN ZN C 195 1555 1555 2.48 LINK OD1 ASP C 30 ZN ZN C 196 1555 1555 2.51 LINK OD1 ASP A 30 ZN ZN A 196 1555 1555 2.52 LINK O2 BB2 C 194 ZN ZN C 195 1555 1555 2.52 LINK NE2 HIS B 133 ZN ZN B 195 1555 1555 2.53 LINK O2 BB2 A 194 ZN ZN A 195 1555 1555 2.54 LINK O4 BB2 B 194 ZN ZN B 195 1555 1555 2.59 LINK O4 BB2 D 194 ZN ZN D 195 1555 1555 2.64 LINK OE2 GLU B 69 ZN ZN A 196 1555 1555 2.65 LINK ZN ZN D 198 O HOH D 467 1555 1555 2.52 LINK ZN ZN A 199 O HOH A 264 1555 1555 2.54 CISPEP 1 TYR A 6 PRO A 7 0 0.32 CISPEP 2 TYR B 6 PRO B 7 0 -0.27 CISPEP 3 TYR C 6 PRO C 7 0 -0.85 CISPEP 4 TYR D 6 PRO D 7 0 -0.25 SITE 1 AC1 15 ASP A 40 MET A 41 ILE A 42 GLY A 43 SITE 2 AC1 15 GLN A 48 PHE A 87 ASP A 88 GLU A 89 SITE 3 AC1 15 GLY A 90 CYS A 91 LEU A 92 HIS A 133 SITE 4 AC1 15 GLU A 134 HIS A 137 ZN A 195 SITE 1 AC2 5 GLN A 48 CYS A 91 HIS A 133 HIS A 137 SITE 2 AC2 5 BB2 A 194 SITE 1 AC3 4 ASP A 30 ASP A 34 ZN A 197 GLU B 69 SITE 1 AC4 6 ASP A 30 ASP A 34 ZN A 196 ASP B 30 SITE 2 AC4 6 ASP B 34 ZN B 198 SITE 1 AC5 2 ASP A 88 ASP B 153 SITE 1 AC6 4 ASP A 40 GLU A 63 HOH A 264 LYS B 38 SITE 1 AC7 16 ASP B 40 MET B 41 ILE B 42 GLY B 43 SITE 2 AC7 16 GLN B 48 PHE B 87 ASP B 88 GLY B 90 SITE 3 AC7 16 CYS B 91 LEU B 92 ARG B 129 ILE B 130 SITE 4 AC7 16 HIS B 133 GLU B 134 HIS B 137 ZN B 195 SITE 1 AC8 5 GLN B 48 CYS B 91 HIS B 133 HIS B 137 SITE 2 AC8 5 BB2 B 194 SITE 1 AC9 3 LYS A 38 ASP B 40 GLU B 63 SITE 1 BC1 4 GLU A 158 GLU B 157 GLU B 160 GLU B 179 SITE 1 BC2 4 GLU A 69 ZN A 197 ASP B 30 ASP B 34 SITE 1 BC3 16 ASP C 40 MET C 41 ILE C 42 GLY C 43 SITE 2 BC3 16 GLN C 48 PHE C 87 ASP C 88 GLU C 89 SITE 3 BC3 16 GLY C 90 CYS C 91 LEU C 92 TYR C 98 SITE 4 BC3 16 HIS C 133 GLU C 134 HIS C 137 ZN C 195 SITE 1 BC4 5 GLN C 48 CYS C 91 HIS C 133 HIS C 137 SITE 2 BC4 5 BB2 C 194 SITE 1 BC5 3 ASP C 30 ASP C 34 GLU D 69 SITE 1 BC6 3 ASP C 40 GLU C 63 LYS D 38 SITE 1 BC7 2 HOH C 266 ASP D 153 SITE 1 BC8 5 GLU C 158 GLU D 160 GLU D 179 ZN D 198 SITE 2 BC8 5 HOH D 477 SITE 1 BC9 16 ASP D 40 MET D 41 ILE D 42 GLY D 43 SITE 2 BC9 16 GLN D 48 PHE D 87 ASP D 88 GLU D 89 SITE 3 BC9 16 GLY D 90 CYS D 91 LEU D 92 ILE D 130 SITE 4 BC9 16 HIS D 133 GLU D 134 HIS D 137 ZN D 195 SITE 1 CC1 5 GLN D 48 CYS D 91 HIS D 133 HIS D 137 SITE 2 CC1 5 BB2 D 194 SITE 1 CC2 3 GLU C 69 ASP D 30 ASP D 34 SITE 1 CC3 6 ZN C 199 GLU D 157 GLU D 160 GLU D 179 SITE 2 CC3 6 HOH D 467 HOH D 477 SITE 1 CC4 2 ASP D 40 GLU D 63 CRYST1 66.640 66.730 189.690 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015006 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014986 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005272 0.00000 MASTER 687 0 23 26 31 0 41 6 0 0 0 60 END