HEADER TRANSFERASE 30-JAN-10 3LMH TITLE CRYSTAL STRUCTURE OF THE ALPHA-KINASE DOMAIN OF MYOSIN HEAVY TITLE 2 CHAIN KINASE A COMPLEX WITH ADP COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYOSIN HEAVY CHAIN KINASE A; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 552-841; COMPND 5 SYNONYM: MHCK-A; COMPND 6 EC: 2.7.11.7; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DICTYOSTELIUM DISCOIDEUM; SOURCE 3 ORGANISM_COMMON: SLIME MOLD; SOURCE 4 ORGANISM_TAXID: 44689; SOURCE 5 STRAIN: AX3; SOURCE 6 GENE: DDB_G0291231, MHCKA, MHKA, MNKA; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS PROTEIN KINASE LIKE FOLD, ATP-BINDING, KINASE, NUCLEOTIDE- KEYWDS 2 BINDING, SERINE/THREONINE-PROTEIN KINASE, ALPHA-KINASE, KEYWDS 3 COILED COIL, WD REPEAT, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Q.YE,Z.JIA REVDAT 1 16-MAR-10 3LMH 0 JRNL AUTH Q.YE,S.W.CRAWLEY,Y.YANG,G.P.COTE,Z.JIA JRNL TITL CRYSTAL STRUCTURE OF THE {ALPHA}-KINASE DOMAIN OF JRNL TITL 2 DICTYOSTELIUM MYOSIN HEAVY CHAIN KINASE A. JRNL REF SCI.SIGNAL. V. 3 RA17 2010 JRNL REFN ESSN 1937-9145 JRNL PMID 20197546 JRNL DOI 10.1126/SCISIGNAL.2000525 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 6.1.0 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 46631 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2484 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3893 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 368 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.169 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.161 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.111 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.917 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 3LMH COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-FEB-10. REMARK 100 THE RCSB ID CODE IS RCSB057459. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49217 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.0100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.48100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.803 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3LKM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2M MAGNESIUM REMARK 280 SULFATE, 0.1M CACODYLATE , PH 6.0, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 41.41200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.02350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.41200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.02350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 535 REMARK 465 GLY A 536 REMARK 465 GLY A 537 REMARK 465 HIS A 538 REMARK 465 HIS A 539 REMARK 465 HIS A 540 REMARK 465 HIS A 541 REMARK 465 HIS A 542 REMARK 465 HIS A 543 REMARK 465 GLY A 544 REMARK 465 GLU A 545 REMARK 465 ASN A 546 REMARK 465 LEU A 547 REMARK 465 TYR A 548 REMARK 465 PHE A 549 REMARK 465 GLN A 550 REMARK 465 GLY A 551 REMARK 465 GLY A 611 REMARK 465 THR A 612 REMARK 465 THR A 613 REMARK 465 THR A 614 REMARK 465 LYS A 615 REMARK 465 ALA A 651 REMARK 465 GLU A 652 REMARK 465 GLN A 653 REMARK 465 SER A 702 REMARK 465 SER A 703 REMARK 465 GLY A 810 REMARK 465 GLY A 811 REMARK 465 VAL A 812 REMARK 465 LEU A 813 REMARK 465 SER A 814 REMARK 465 GLY A 815 REMARK 465 ASN A 816 REMARK 465 ASN A 817 REMARK 465 LYS A 818 REMARK 465 LYS A 819 REMARK 465 GLN A 820 REMARK 465 LEU A 821 REMARK 465 GLN A 822 REMARK 465 GLN A 823 REMARK 465 GLY A 824 REMARK 465 THR A 825 REMARK 465 MET A 826 REMARK 465 VAL A 827 REMARK 465 MET A 828 REMARK 465 PRO A 829 REMARK 465 ASP A 830 REMARK 465 ILE A 831 REMARK 465 LEU A 832 REMARK 465 PRO A 833 REMARK 465 GLU A 834 REMARK 465 LEU A 835 REMARK 465 MET A 836 REMARK 465 PRO A 837 REMARK 465 SER A 838 REMARK 465 ASP A 839 REMARK 465 ASN A 840 REMARK 465 THR A 841 REMARK 465 MET B 535 REMARK 465 GLY B 536 REMARK 465 GLY B 537 REMARK 465 HIS B 538 REMARK 465 HIS B 539 REMARK 465 HIS B 540 REMARK 465 HIS B 541 REMARK 465 HIS B 542 REMARK 465 HIS B 543 REMARK 465 GLY B 544 REMARK 465 GLU B 545 REMARK 465 ASN B 546 REMARK 465 LEU B 547 REMARK 465 TYR B 548 REMARK 465 PHE B 549 REMARK 465 GLN B 550 REMARK 465 GLY B 551 REMARK 465 GLY B 611 REMARK 465 THR B 612 REMARK 465 THR B 613 REMARK 465 THR B 614 REMARK 465 LYS B 615 REMARK 465 LYS B 649 REMARK 465 GLU B 650 REMARK 465 ALA B 651 REMARK 465 GLU B 652 REMARK 465 GLN B 653 REMARK 465 GLN B 654 REMARK 465 SER B 702 REMARK 465 SER B 703 REMARK 465 ASN B 704 REMARK 465 GLY B 705 REMARK 465 GLN B 706 REMARK 465 LYS B 808 REMARK 465 LEU B 809 REMARK 465 GLY B 810 REMARK 465 GLY B 811 REMARK 465 VAL B 812 REMARK 465 LEU B 813 REMARK 465 SER B 814 REMARK 465 GLY B 815 REMARK 465 ASN B 816 REMARK 465 ASN B 817 REMARK 465 LYS B 818 REMARK 465 LYS B 819 REMARK 465 GLN B 820 REMARK 465 LEU B 821 REMARK 465 GLN B 822 REMARK 465 GLN B 823 REMARK 465 GLY B 824 REMARK 465 THR B 825 REMARK 465 MET B 826 REMARK 465 VAL B 827 REMARK 465 MET B 828 REMARK 465 PRO B 829 REMARK 465 ASP B 830 REMARK 465 ILE B 831 REMARK 465 LEU B 832 REMARK 465 PRO B 833 REMARK 465 GLU B 834 REMARK 465 LEU B 835 REMARK 465 MET B 836 REMARK 465 PRO B 837 REMARK 465 SER B 838 REMARK 465 ASP B 839 REMARK 465 ASN B 840 REMARK 465 THR B 841 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 704 OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE ARG A 671 O HOH A 281 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 649 -6.49 147.72 REMARK 500 GLN A 706 -159.12 -100.50 REMARK 500 TYR A 727 49.20 -148.22 REMARK 500 VAL A 755 -162.61 -127.62 REMARK 500 ASP A 761 -131.20 61.25 REMARK 500 SER B 554 72.13 -105.83 REMARK 500 TYR B 727 43.27 -149.59 REMARK 500 VAL B 755 -162.04 -126.94 REMARK 500 ASP B 761 -120.19 56.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 109 DISTANCE = 5.08 ANGSTROMS REMARK 525 HOH B 205 DISTANCE = 5.68 ANGSTROMS REMARK 525 HOH A 177 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH B 229 DISTANCE = 5.45 ANGSTROMS REMARK 525 HOH B 348 DISTANCE = 7.97 ANGSTROMS REMARK 525 HOH A 276 DISTANCE = 5.38 ANGSTROMS REMARK 525 HOH A 278 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH A 337 DISTANCE = 7.47 ANGSTROMS REMARK 525 HOH A 364 DISTANCE = 5.42 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 1 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 742 ND1 REMARK 620 2 CYS A 800 SG 122.1 REMARK 620 3 CYS A 796 SG 93.3 117.8 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 1511 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 842 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 1512 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 842 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3LKM RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX WITH AMP REMARK 900 RELATED ID: 3LLA RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX WITH AMPCP REMARK 900 RELATED ID: 3LMI RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX WITH ATP DBREF 3LMH A 552 841 UNP P42527 MHCKA_DICDI 552 841 DBREF 3LMH B 552 841 UNP P42527 MHCKA_DICDI 552 841 SEQADV 3LMH MET A 535 UNP P42527 EXPRESSION TAG SEQADV 3LMH GLY A 536 UNP P42527 EXPRESSION TAG SEQADV 3LMH GLY A 537 UNP P42527 EXPRESSION TAG SEQADV 3LMH HIS A 538 UNP P42527 EXPRESSION TAG SEQADV 3LMH HIS A 539 UNP P42527 EXPRESSION TAG SEQADV 3LMH HIS A 540 UNP P42527 EXPRESSION TAG SEQADV 3LMH HIS A 541 UNP P42527 EXPRESSION TAG SEQADV 3LMH HIS A 542 UNP P42527 EXPRESSION TAG SEQADV 3LMH HIS A 543 UNP P42527 EXPRESSION TAG SEQADV 3LMH GLY A 544 UNP P42527 EXPRESSION TAG SEQADV 3LMH GLU A 545 UNP P42527 EXPRESSION TAG SEQADV 3LMH ASN A 546 UNP P42527 EXPRESSION TAG SEQADV 3LMH LEU A 547 UNP P42527 EXPRESSION TAG SEQADV 3LMH TYR A 548 UNP P42527 EXPRESSION TAG SEQADV 3LMH PHE A 549 UNP P42527 EXPRESSION TAG SEQADV 3LMH GLN A 550 UNP P42527 EXPRESSION TAG SEQADV 3LMH GLY A 551 UNP P42527 EXPRESSION TAG SEQADV 3LMH MET B 535 UNP P42527 EXPRESSION TAG SEQADV 3LMH GLY B 536 UNP P42527 EXPRESSION TAG SEQADV 3LMH GLY B 537 UNP P42527 EXPRESSION TAG SEQADV 3LMH HIS B 538 UNP P42527 EXPRESSION TAG SEQADV 3LMH HIS B 539 UNP P42527 EXPRESSION TAG SEQADV 3LMH HIS B 540 UNP P42527 EXPRESSION TAG SEQADV 3LMH HIS B 541 UNP P42527 EXPRESSION TAG SEQADV 3LMH HIS B 542 UNP P42527 EXPRESSION TAG SEQADV 3LMH HIS B 543 UNP P42527 EXPRESSION TAG SEQADV 3LMH GLY B 544 UNP P42527 EXPRESSION TAG SEQADV 3LMH GLU B 545 UNP P42527 EXPRESSION TAG SEQADV 3LMH ASN B 546 UNP P42527 EXPRESSION TAG SEQADV 3LMH LEU B 547 UNP P42527 EXPRESSION TAG SEQADV 3LMH TYR B 548 UNP P42527 EXPRESSION TAG SEQADV 3LMH PHE B 549 UNP P42527 EXPRESSION TAG SEQADV 3LMH GLN B 550 UNP P42527 EXPRESSION TAG SEQADV 3LMH GLY B 551 UNP P42527 EXPRESSION TAG SEQRES 1 A 307 MET GLY GLY HIS HIS HIS HIS HIS HIS GLY GLU ASN LEU SEQRES 2 A 307 TYR PHE GLN GLY ILE SER SER GLU THR GLY GLU MET GLY SEQRES 3 A 307 ILE LEU TRP GLU PHE ASP PRO ILE ILE ASN LYS TRP ILE SEQRES 4 A 307 ARG LEU SER MET LYS LEU LYS VAL GLU ARG LYS PRO PHE SEQRES 5 A 307 ALA GLU GLY ALA LEU ARG GLU ALA TYR HIS THR VAL SER SEQRES 6 A 307 LEU GLY VAL GLY THR ASP GLU ASN TYR PRO LEU GLY THR SEQRES 7 A 307 THR THR LYS LEU PHE PRO PRO ILE GLU MET ILE SER PRO SEQRES 8 A 307 ILE SER LYS ASN ASN GLU ALA MET THR GLN LEU LYS ASN SEQRES 9 A 307 GLY THR LYS PHE VAL LEU LYS LEU TYR LYS LYS GLU ALA SEQRES 10 A 307 GLU GLN GLN ALA SER ARG GLU LEU TYR PHE GLU ASP VAL SEQRES 11 A 307 LYS MET GLN MET VAL CYS ARG ASP TRP GLY ASN LYS PHE SEQRES 12 A 307 ASN GLN LYS LYS PRO PRO LYS LYS ILE GLU PHE LEU MET SEQRES 13 A 307 SER TRP VAL VAL GLU LEU ILE ASP ARG SER PRO SER SER SEQRES 14 A 307 ASN GLY GLN PRO ILE LEU CYS SER ILE GLU PRO LEU LEU SEQRES 15 A 307 VAL GLY GLU PHE LYS LYS ASN ASN SER ASN TYR GLY ALA SEQRES 16 A 307 VAL LEU THR ASN ARG SER THR PRO GLN ALA PHE SER HIS SEQRES 17 A 307 PHE THR TYR GLU LEU SER ASN LYS GLN MET ILE VAL VAL SEQRES 18 A 307 ASP ILE GLN GLY VAL ASP ASP LEU TYR THR PHD PRO GLN SEQRES 19 A 307 ILE HIS THR PRO ASP GLY LYS GLY PHE GLY LEU GLY ASN SEQRES 20 A 307 LEU GLY LYS ALA GLY ILE ASN LYS PHE ILE THR THR HIS SEQRES 21 A 307 LYS CYS ASN ALA VAL CYS ALA LEU LEU ASP LEU ASP VAL SEQRES 22 A 307 LYS LEU GLY GLY VAL LEU SER GLY ASN ASN LYS LYS GLN SEQRES 23 A 307 LEU GLN GLN GLY THR MET VAL MET PRO ASP ILE LEU PRO SEQRES 24 A 307 GLU LEU MET PRO SER ASP ASN THR SEQRES 1 B 307 MET GLY GLY HIS HIS HIS HIS HIS HIS GLY GLU ASN LEU SEQRES 2 B 307 TYR PHE GLN GLY ILE SER SER GLU THR GLY GLU MET GLY SEQRES 3 B 307 ILE LEU TRP GLU PHE ASP PRO ILE ILE ASN LYS TRP ILE SEQRES 4 B 307 ARG LEU SER MET LYS LEU LYS VAL GLU ARG LYS PRO PHE SEQRES 5 B 307 ALA GLU GLY ALA LEU ARG GLU ALA TYR HIS THR VAL SER SEQRES 6 B 307 LEU GLY VAL GLY THR ASP GLU ASN TYR PRO LEU GLY THR SEQRES 7 B 307 THR THR LYS LEU PHE PRO PRO ILE GLU MET ILE SER PRO SEQRES 8 B 307 ILE SER LYS ASN ASN GLU ALA MET THR GLN LEU LYS ASN SEQRES 9 B 307 GLY THR LYS PHE VAL LEU LYS LEU TYR LYS LYS GLU ALA SEQRES 10 B 307 GLU GLN GLN ALA SER ARG GLU LEU TYR PHE GLU ASP VAL SEQRES 11 B 307 LYS MET GLN MET VAL CYS ARG ASP TRP GLY ASN LYS PHE SEQRES 12 B 307 ASN GLN LYS LYS PRO PRO LYS LYS ILE GLU PHE LEU MET SEQRES 13 B 307 SER TRP VAL VAL GLU LEU ILE ASP ARG SER PRO SER SER SEQRES 14 B 307 ASN GLY GLN PRO ILE LEU CYS SER ILE GLU PRO LEU LEU SEQRES 15 B 307 VAL GLY GLU PHE LYS LYS ASN ASN SER ASN TYR GLY ALA SEQRES 16 B 307 VAL LEU THR ASN ARG SER THR PRO GLN ALA PHE SER HIS SEQRES 17 B 307 PHE THR TYR GLU LEU SER ASN LYS GLN MET ILE VAL VAL SEQRES 18 B 307 ASP ILE GLN GLY VAL ASP ASP LEU TYR THR PHD PRO GLN SEQRES 19 B 307 ILE HIS THR PRO ASP GLY LYS GLY PHE GLY LEU GLY ASN SEQRES 20 B 307 LEU GLY LYS ALA GLY ILE ASN LYS PHE ILE THR THR HIS SEQRES 21 B 307 LYS CYS ASN ALA VAL CYS ALA LEU LEU ASP LEU ASP VAL SEQRES 22 B 307 LYS LEU GLY GLY VAL LEU SER GLY ASN ASN LYS LYS GLN SEQRES 23 B 307 LEU GLN GLN GLY THR MET VAL MET PRO ASP ILE LEU PRO SEQRES 24 B 307 GLU LEU MET PRO SER ASP ASN THR MODRES 3LMH PHD A 766 ASP ASPARTYL PHOSPHATE MODRES 3LMH PHD B 766 ASP ASPARTYL PHOSPHATE HET PHD A 766 12 HET PHD B 766 12 HET ADP A1511 27 HET ZN A 1 1 HET PO4 A 842 5 HET ADP B1512 27 HET ZN B 2 1 HET PO4 B 842 5 HETNAM PHD ASPARTYL PHOSPHATE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM ZN ZINC ION HETNAM PO4 PHOSPHATE ION FORMUL 1 PHD 2(C4 H8 N O7 P) FORMUL 3 ADP 2(C10 H15 N5 O10 P2) FORMUL 4 ZN 2(ZN 2+) FORMUL 5 PO4 2(O4 P 3-) FORMUL 9 HOH *368(H2 O) HELIX 1 1 PRO A 619 ILE A 623 5 5 HELIX 2 2 GLU A 631 LEU A 636 1 6 HELIX 3 3 SER A 656 GLN A 679 1 24 HELIX 4 4 SER A 735 SER A 748 1 14 HELIX 5 5 LEU A 782 HIS A 794 1 13 HELIX 6 6 ASN A 797 LEU A 803 1 7 HELIX 7 7 PRO B 619 ILE B 623 5 5 HELIX 8 8 GLU B 631 LEU B 636 1 6 HELIX 9 9 SER B 656 LYS B 680 1 25 HELIX 10 10 SER B 735 SER B 748 1 14 HELIX 11 11 LEU B 782 HIS B 794 1 13 HELIX 12 12 ASN B 797 LEU B 803 1 7 SHEET 1 A 8 ALA A 587 GLU A 588 0 SHEET 2 A 8 ARG A 592 THR A 604 -1 O ALA A 594 N ALA A 587 SHEET 3 A 8 LYS A 641 TYR A 647 -1 O PHE A 642 N THR A 597 SHEET 4 A 8 ILE A 708 PRO A 714 -1 O SER A 711 N LYS A 645 SHEET 5 A 8 TRP A 692 LEU A 696 -1 N LEU A 696 O ILE A 708 SHEET 6 A 8 GLU A 558 ASP A 566 -1 N TRP A 563 O VAL A 693 SHEET 7 A 8 LYS A 571 VAL A 581 -1 O ILE A 573 N GLU A 564 SHEET 8 A 8 ARG A 592 THR A 604 -1 O LEU A 600 N LYS A 578 SHEET 1 B 4 GLU A 687 PHE A 688 0 SHEET 2 B 4 LEU A 763 TYR A 764 1 O TYR A 764 N GLU A 687 SHEET 3 B 4 GLN A 758 VAL A 760 -1 N VAL A 760 O LEU A 763 SHEET 4 B 4 LYS A 721 LYS A 722 -1 N LYS A 721 O GLY A 759 SHEET 1 C 2 ILE A 753 VAL A 755 0 SHEET 2 C 2 GLN A 768 HIS A 770 -1 O GLN A 768 N VAL A 755 SHEET 1 D 8 ALA B 587 GLU B 588 0 SHEET 2 D 8 ARG B 592 THR B 604 -1 O ALA B 594 N ALA B 587 SHEET 3 D 8 LYS B 641 TYR B 647 -1 O PHE B 642 N THR B 597 SHEET 4 D 8 LEU B 709 PRO B 714 -1 O GLU B 713 N VAL B 643 SHEET 5 D 8 TRP B 692 GLU B 695 -1 N TRP B 692 O ILE B 712 SHEET 6 D 8 GLU B 558 ASP B 566 -1 N TRP B 563 O VAL B 693 SHEET 7 D 8 LYS B 571 VAL B 581 -1 O LEU B 575 N LEU B 562 SHEET 8 D 8 ARG B 592 THR B 604 -1 O LEU B 600 N LYS B 578 SHEET 1 E 4 GLU B 687 PHE B 688 0 SHEET 2 E 4 LEU B 763 THR B 765 1 O TYR B 764 N GLU B 687 SHEET 3 E 4 GLN B 758 VAL B 760 -1 N GLN B 758 O THR B 765 SHEET 4 E 4 PHE B 720 LYS B 722 -1 N LYS B 721 O GLY B 759 SHEET 1 F 2 ILE B 753 VAL B 755 0 SHEET 2 F 2 GLN B 768 HIS B 770 -1 O GLN B 768 N VAL B 755 LINK C THR A 765 N PHD A 766 1555 1555 1.33 LINK C PHD A 766 N PRO A 767 1555 1555 1.35 LINK C THR B 765 N PHD B 766 1555 1555 1.33 LINK C PHD B 766 N PRO B 767 1555 1555 1.35 LINK SG CYS B 800 ZN ZN B 2 1555 1555 1.95 LINK ND1 HIS A 742 ZN ZN A 1 1555 1555 2.13 LINK SG CYS A 800 ZN ZN A 1 1555 1555 2.35 LINK SG CYS A 796 ZN ZN A 1 1555 1555 2.42 CISPEP 1 PHE A 617 PRO A 618 0 -3.28 CISPEP 2 GLY A 705 GLN A 706 0 -19.57 CISPEP 3 ILE B 552 SER B 553 0 -12.95 CISPEP 4 LEU B 616 PHE B 617 0 -2.16 CISPEP 5 PHE B 617 PRO B 618 0 -6.86 SITE 1 AC1 16 HOH A 279 HOH A 320 PHE A 586 ALA A 587 SITE 2 AC1 16 GLY A 589 ALA A 590 LEU A 591 ARG A 592 SITE 3 AC1 16 VAL A 643 LYS A 645 LEU A 689 GLU A 713 SITE 4 AC1 16 PRO A 714 LEU A 716 PHE A 720 PHD A 766 SITE 1 AC2 4 HIS A 742 HIS A 794 CYS A 796 CYS A 800 SITE 1 AC3 6 HOH A 104 HOH A 206 LYS A 684 ARG A 734 SITE 2 AC3 6 SER A 735 THR A 736 SITE 1 AC4 16 HOH B 248 HOH B 365 ALA B 587 GLU B 588 SITE 2 AC4 16 GLY B 589 ALA B 590 LEU B 591 ARG B 592 SITE 3 AC4 16 VAL B 643 LYS B 645 LEU B 689 GLU B 713 SITE 4 AC4 16 PRO B 714 LEU B 716 PHE B 720 PHD B 766 SITE 1 AC5 4 HIS B 742 HIS B 794 CYS B 796 CYS B 800 SITE 1 AC6 4 LYS B 684 ARG B 734 SER B 735 THR B 736 CRYST1 82.824 110.047 78.714 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012074 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009087 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012704 0.00000 MASTER 442 0 8 12 28 0 13 6 0 0 0 48 END