HEADER TRANSCRIPTION 30-SEP-09 3K2J TITLE CRYSTAL STRUCTURE OF THE 3RD BROMODOMAIN OF HUMAN POLY-BROMODOMAIN TITLE 2 CONTAINING PROTEIN 1 (PB1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN POLYBROMO-1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: BROMO 3 DOMAIN, UNP RESIDUES 388-494; COMPND 5 SYNONYM: PB1, HPB1, POLYBROMO-1D, BRG1-ASSOCIATED FACTOR 180, BAF180; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PB1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-R3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS PB1, POLYBROMO 1 ISOFORM 1, BAF180, POLYBROMO01D, PBRM1, BRG1- KEYWDS 2 ASSOCIATED FACTOR 180, STRUCTURAL GENOMICS CONSORTIUM, SGC, KEYWDS 3 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR P.FILIPPAKOPOULOS,S.PICAUD,T.KEATES,A.CHAIKUAD,A.C.W.PIKE,T.KROJER, AUTHOR 2 R.SETHI,F.VON DELFT,C.H.ARROWSMITH,A.EDWARDS,J.WEIGELT,C.BOUNTRA, AUTHOR 3 S.KNAPP,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 2 13-JUL-11 3K2J 1 VERSN REVDAT 1 13-OCT-09 3K2J 0 JRNL AUTH P.FILIPPAKOPOULOS,S.PICAUD,T.KEATES,A.CHAIKUAD,A.C.W.PIKE, JRNL AUTH 2 T.KROJER,R.SETHI,F.VON DELFT,C.H.ARROWSMITH,A.EDWARDS, JRNL AUTH 3 J.WEIGELT,C.BOUNTRA,S.KNAPP JRNL TITL CRYSTAL STRUCTURE OF THE 3RD BROMODOMAIN OF HUMAN JRNL TITL 2 POLY-BROMODOMAIN CONTAINING PROTEIN 1 (PB1) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0089 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.22 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 15238 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 744 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1069 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.56 REMARK 3 BIN R VALUE (WORKING SET) : 0.2970 REMARK 3 BIN FREE R VALUE SET COUNT : 51 REMARK 3 BIN FREE R VALUE : 0.2850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1891 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 54 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 50.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.74000 REMARK 3 B22 (A**2) : 1.74000 REMARK 3 B33 (A**2) : -2.61000 REMARK 3 B12 (A**2) : 0.87000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.281 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.225 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.191 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.939 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1994 ; 0.016 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1322 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2709 ; 1.459 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3217 ; 0.940 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 254 ; 6.042 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 100 ;43.303 ;25.400 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 331 ;17.828 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;14.163 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 293 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2275 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 383 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1260 ; 3.105 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 496 ; 2.051 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1996 ; 3.826 ; 5.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 734 ; 6.027 ; 8.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 711 ; 6.463 ;11.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 346 A 459 2 REMARK 3 1 B 346 B 459 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 703 ; 0.020 ; 0.050 REMARK 3 MEDIUM POSITIONAL 1 A (A): 853 ; 0.020 ; 0.500 REMARK 3 TIGHT THERMAL 1 A (A**2): 703 ; 0.100 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 853 ; 0.080 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 342 A 427 REMARK 3 ORIGIN FOR THE GROUP (A): 20.4899 -25.7546 4.2524 REMARK 3 T TENSOR REMARK 3 T11: 0.0370 T22: 0.2320 REMARK 3 T33: 0.0315 T12: -0.0582 REMARK 3 T13: 0.0161 T23: -0.0193 REMARK 3 L TENSOR REMARK 3 L11: 4.8668 L22: 6.7969 REMARK 3 L33: 5.8078 L12: -0.2792 REMARK 3 L13: 0.8589 L23: -0.6691 REMARK 3 S TENSOR REMARK 3 S11: -0.0427 S12: -0.3491 S13: 0.2275 REMARK 3 S21: 0.1438 S22: 0.1711 S23: 0.3110 REMARK 3 S31: -0.1657 S32: -0.4301 S33: -0.1284 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 428 A 462 REMARK 3 ORIGIN FOR THE GROUP (A): 30.7770 -27.4642 -0.0053 REMARK 3 T TENSOR REMARK 3 T11: 0.1070 T22: 0.0931 REMARK 3 T33: 0.0839 T12: -0.0351 REMARK 3 T13: 0.0210 T23: -0.0283 REMARK 3 L TENSOR REMARK 3 L11: 2.2701 L22: 9.1508 REMARK 3 L33: 3.6913 L12: 1.0459 REMARK 3 L13: 0.5604 L23: -3.5915 REMARK 3 S TENSOR REMARK 3 S11: -0.2168 S12: 0.0277 S13: -0.1467 REMARK 3 S21: 0.1595 S22: 0.0536 S23: -0.6761 REMARK 3 S31: 0.0876 S32: -0.0033 S33: 0.1632 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 342 B 427 REMARK 3 ORIGIN FOR THE GROUP (A): 11.9032 -30.5851 -15.6784 REMARK 3 T TENSOR REMARK 3 T11: 0.1352 T22: 0.1324 REMARK 3 T33: 0.0362 T12: -0.1120 REMARK 3 T13: -0.0109 T23: 0.0234 REMARK 3 L TENSOR REMARK 3 L11: 6.3824 L22: 5.2425 REMARK 3 L33: 5.5419 L12: -1.2608 REMARK 3 L13: -0.3696 L23: 0.8450 REMARK 3 S TENSOR REMARK 3 S11: 0.0274 S12: 0.0595 S13: 0.4007 REMARK 3 S21: -0.3324 S22: 0.1138 S23: 0.0846 REMARK 3 S31: -0.4572 S32: 0.0227 S33: -0.1412 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 428 B 462 REMARK 3 ORIGIN FOR THE GROUP (A): 8.0124 -40.1217 -11.1754 REMARK 3 T TENSOR REMARK 3 T11: 0.0737 T22: 0.1216 REMARK 3 T33: 0.0599 T12: -0.0255 REMARK 3 T13: -0.0043 T23: 0.0351 REMARK 3 L TENSOR REMARK 3 L11: 9.5354 L22: 3.2690 REMARK 3 L33: 4.2897 L12: -2.8903 REMARK 3 L13: -3.8855 L23: 2.5286 REMARK 3 S TENSOR REMARK 3 S11: -0.0952 S12: -0.1317 S13: -0.6039 REMARK 3 S21: -0.0823 S22: -0.1156 S23: 0.2172 REMARK 3 S31: 0.0979 S32: 0.1624 S33: 0.2107 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: RESIDUAL ONLY REMARK 4 REMARK 4 3K2J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-OCT-09. REMARK 100 THE RCSB ID CODE IS RCSB055464. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15266 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 36.221 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : 0.07400 REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.74400 REMARK 200 R SYM FOR SHELL (I) : 0.74400 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: ENSEMBLE OF 2NXB, 2OO1, 2OSS, 2OUO, 2RFJ, 3DAI, REMARK 200 3D7C, 3DWY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NAOAC.3H20 PH 5.5, 1.1M (NH4) REMARK 280 2SO4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.98333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 26.49167 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 39.73750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 13.24583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 66.22917 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE PROTEIN IS MONOMERIC BY GEL FILTRATION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 333 REMARK 465 HIS A 334 REMARK 465 HIS A 335 REMARK 465 HIS A 336 REMARK 465 HIS A 337 REMARK 465 HIS A 338 REMARK 465 HIS A 339 REMARK 465 SER A 340 REMARK 465 SER A 341 REMARK 465 MET B 333 REMARK 465 HIS B 334 REMARK 465 HIS B 335 REMARK 465 HIS B 336 REMARK 465 HIS B 337 REMARK 465 HIS B 338 REMARK 465 HIS B 339 REMARK 465 SER B 340 REMARK 465 SER B 341 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 343 CG1 CG2 REMARK 470 ASP A 344 CG OD1 OD2 REMARK 470 LEU A 345 CG CD1 CD2 REMARK 470 THR A 347 OG1 CG2 REMARK 470 LEU A 350 CG CD1 CD2 REMARK 470 ASN A 367 CG OD1 REMARK 470 GLN A 370 CG CD OE1 NE2 REMARK 470 ILE A 372 CG1 CG2 CD1 REMARK 470 SER A 381 OG REMARK 470 LYS A 382 CG CD CE NZ REMARK 470 LYS A 383 CG CD CE NZ REMARK 470 LYS A 384 CG CD CE NZ REMARK 470 LYS A 393 CD CE NZ REMARK 470 ARG A 429 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 443 CE NZ REMARK 470 LYS A 453 CD CE NZ REMARK 470 ARG A 457 NE CZ NH1 NH2 REMARK 470 ARG A 458 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 461 CG1 CG2 CD1 REMARK 470 VAL B 343 CG1 CG2 REMARK 470 THR B 347 OG1 CG2 REMARK 470 LEU B 350 CG CD1 CD2 REMARK 470 TYR B 351 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE B 352 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN B 367 CG OD1 REMARK 470 GLN B 370 CG CD OE1 NE2 REMARK 470 ILE B 372 CG1 CG2 CD1 REMARK 470 SER B 381 OG REMARK 470 LYS B 382 CG CD CE NZ REMARK 470 LYS B 383 CG CD CE NZ REMARK 470 LYS B 384 CG CD CE NZ REMARK 470 LYS B 393 CD CE NZ REMARK 470 ARG B 429 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 443 CE NZ REMARK 470 LYS B 453 CD CE NZ REMARK 470 ARG B 457 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 458 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 461 CG1 CG2 CD1 REMARK 470 GLU B 462 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 362 O1 SO4 B 2 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2 DBREF 3K2J A 356 462 UNP Q86U86 PB1_HUMAN 388 494 DBREF 3K2J B 356 462 UNP Q86U86 PB1_HUMAN 388 494 SEQADV 3K2J MET A 333 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J HIS A 334 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J HIS A 335 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J HIS A 336 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J HIS A 337 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J HIS A 338 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J HIS A 339 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J SER A 340 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J SER A 341 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J GLY A 342 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J VAL A 343 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J ASP A 344 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J LEU A 345 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J GLY A 346 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J THR A 347 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J GLU A 348 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J ASN A 349 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J LEU A 350 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J TYR A 351 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J PHE A 352 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J GLN A 353 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J SER A 354 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J MET A 355 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J MET B 333 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J HIS B 334 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J HIS B 335 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J HIS B 336 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J HIS B 337 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J HIS B 338 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J HIS B 339 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J SER B 340 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J SER B 341 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J GLY B 342 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J VAL B 343 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J ASP B 344 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J LEU B 345 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J GLY B 346 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J THR B 347 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J GLU B 348 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J ASN B 349 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J LEU B 350 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J TYR B 351 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J PHE B 352 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J GLN B 353 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J SER B 354 UNP Q86U86 EXPRESSION TAG SEQADV 3K2J MET B 355 UNP Q86U86 EXPRESSION TAG SEQRES 1 A 130 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 130 GLY THR GLU ASN LEU TYR PHE GLN SER MET GLN LEU TYR SEQRES 3 A 130 ASP THR VAL ARG SER CYS ARG ASN ASN GLN GLY GLN LEU SEQRES 4 A 130 ILE ALA GLU PRO PHE TYR HIS LEU PRO SER LYS LYS LYS SEQRES 5 A 130 TYR PRO ASP TYR TYR GLN GLN ILE LYS MET PRO ILE SER SEQRES 6 A 130 LEU GLN GLN ILE ARG THR LYS LEU LYS ASN GLN GLU TYR SEQRES 7 A 130 GLU THR LEU ASP HIS LEU GLU CYS ASP LEU ASN LEU MET SEQRES 8 A 130 PHE GLU ASN ALA LYS ARG TYR ASN VAL PRO ASN SER ALA SEQRES 9 A 130 ILE TYR LYS ARG VAL LEU LYS LEU GLN GLN VAL MET GLN SEQRES 10 A 130 ALA LYS LYS LYS GLU LEU ALA ARG ARG ASP ASP ILE GLU SEQRES 1 B 130 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 130 GLY THR GLU ASN LEU TYR PHE GLN SER MET GLN LEU TYR SEQRES 3 B 130 ASP THR VAL ARG SER CYS ARG ASN ASN GLN GLY GLN LEU SEQRES 4 B 130 ILE ALA GLU PRO PHE TYR HIS LEU PRO SER LYS LYS LYS SEQRES 5 B 130 TYR PRO ASP TYR TYR GLN GLN ILE LYS MET PRO ILE SER SEQRES 6 B 130 LEU GLN GLN ILE ARG THR LYS LEU LYS ASN GLN GLU TYR SEQRES 7 B 130 GLU THR LEU ASP HIS LEU GLU CYS ASP LEU ASN LEU MET SEQRES 8 B 130 PHE GLU ASN ALA LYS ARG TYR ASN VAL PRO ASN SER ALA SEQRES 9 B 130 ILE TYR LYS ARG VAL LEU LYS LEU GLN GLN VAL MET GLN SEQRES 10 B 130 ALA LYS LYS LYS GLU LEU ALA ARG ARG ASP ASP ILE GLU HET CL A 1 1 HET CL A 2 1 HET SO4 B 1 5 HET SO4 B 2 5 HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION FORMUL 3 CL 2(CL 1-) FORMUL 5 SO4 2(O4 S 2-) FORMUL 7 HOH *54(H2 O) HELIX 1 1 LEU A 345 SER A 363 1 19 HELIX 2 2 ALA A 373 TYR A 377 5 5 HELIX 3 3 TYR A 385 ILE A 392 1 8 HELIX 4 4 SER A 397 ASN A 407 1 11 HELIX 5 5 THR A 412 ASN A 431 1 20 HELIX 6 6 SER A 435 ASP A 459 1 25 HELIX 7 7 LEU B 345 SER B 363 1 19 HELIX 8 8 ALA B 373 TYR B 377 5 5 HELIX 9 9 TYR B 385 ILE B 392 1 8 HELIX 10 10 SER B 397 ASN B 407 1 11 HELIX 11 11 THR B 412 ASN B 431 1 20 HELIX 12 12 SER B 435 ASP B 459 1 25 SSBOND 1 CYS A 418 CYS B 418 1555 1555 2.00 CISPEP 1 LYS A 382 LYS A 383 0 4.73 CISPEP 2 LYS B 382 LYS B 383 0 4.98 SITE 1 AC1 1 GLY A 346 SITE 1 AC2 1 GLY B 346 SITE 1 AC3 3 ARG A 362 THR B 360 LYS B 451 SITE 1 AC4 3 THR A 360 LYS A 451 ARG B 362 CRYST1 81.390 81.390 79.475 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012287 0.007094 0.000000 0.00000 SCALE2 0.000000 0.014187 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012583 0.00000 MASTER 438 0 4 12 0 0 4 6 0 0 0 20 END