HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 07-AUG-09 3ILK TITLE THE STRUCTURE OF A PROBABLE METHYLASE FAMILY PROTEIN FROM HAEMOPHILUS TITLE 2 INFLUENZAE RD KW20 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED TRNA/RRNA METHYLTRANSFERASE HI0380; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.1.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS INFLUENZAE; SOURCE 3 ORGANISM_TAXID: 727; SOURCE 4 STRAIN: RD KW20; SOURCE 5 GENE: HAEMOPHILUS INFLUENZAE, HI0380; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PPK1037; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG19 KEYWDS APC63004, METHYLASE FAMILY PROTEIN, HAEMOPHILUS INFLUENZAE RD KW20, KEYWDS 2 STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, MIDWEST KEYWDS 3 CENTER FOR STRUCTURAL GENOMICS, MCSG, METHYLTRANSFERASE, KEYWDS 4 TRANSFERASE, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,H.LI,K.BUCK,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL GENOMICS AUTHOR 2 (MCSG) REVDAT 2 13-JUL-11 3ILK 1 VERSN REVDAT 1 01-SEP-09 3ILK 0 JRNL AUTH K.TAN,H.LI,K.BUCK,A.JOACHIMIAK JRNL TITL THE STRUCTURE OF A PROBABLE METHYLASE FAMILY PROTEIN FROM JRNL TITL 2 HAEMOPHILUS INFLUENZAE RD KW20 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0054 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 35020 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1838 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.01 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.06 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1888 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 71.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.2730 REMARK 3 BIN FREE R VALUE SET COUNT : 95 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3696 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 119 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.26000 REMARK 3 B22 (A**2) : 0.15000 REMARK 3 B33 (A**2) : 1.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.191 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.170 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.138 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.223 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3831 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5165 ; 1.591 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 484 ; 6.091 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 176 ;37.476 ;24.091 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 717 ;18.358 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;18.714 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 598 ; 0.114 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2817 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2370 ; 0.891 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3806 ; 1.517 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1461 ; 2.621 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1351 ; 3.883 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -1 A 169 REMARK 3 ORIGIN FOR THE GROUP (A): 42.8700 33.9420 66.9320 REMARK 3 T TENSOR REMARK 3 T11: 0.2000 T22: 0.1100 REMARK 3 T33: 0.0183 T12: 0.0087 REMARK 3 T13: -0.0284 T23: -0.0008 REMARK 3 L TENSOR REMARK 3 L11: 2.4078 L22: 2.9279 REMARK 3 L33: 1.2600 L12: -0.2673 REMARK 3 L13: -0.6103 L23: 0.3458 REMARK 3 S TENSOR REMARK 3 S11: 0.0672 S12: -0.0009 S13: 0.1466 REMARK 3 S21: 0.1141 S22: -0.0462 S23: -0.1377 REMARK 3 S31: -0.0562 S32: -0.0317 S33: -0.0210 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 171 A 238 REMARK 3 ORIGIN FOR THE GROUP (A): 37.2490 78.6810 96.9530 REMARK 3 T TENSOR REMARK 3 T11: 0.2994 T22: 0.5361 REMARK 3 T33: 0.0561 T12: 0.0491 REMARK 3 T13: -0.0141 T23: 0.0960 REMARK 3 L TENSOR REMARK 3 L11: 6.2318 L22: 8.0469 REMARK 3 L33: 10.1945 L12: 1.4357 REMARK 3 L13: 1.6875 L23: -5.1790 REMARK 3 S TENSOR REMARK 3 S11: -0.0808 S12: -0.1495 S13: 0.1091 REMARK 3 S21: 0.2410 S22: 0.7145 S23: 0.2636 REMARK 3 S31: -0.3618 S32: -1.6097 S33: -0.6337 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 164 REMARK 3 ORIGIN FOR THE GROUP (A): 35.6790 56.3120 59.0130 REMARK 3 T TENSOR REMARK 3 T11: 0.2855 T22: 0.0998 REMARK 3 T33: 0.0201 T12: 0.0161 REMARK 3 T13: -0.0407 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 2.5032 L22: 4.6774 REMARK 3 L33: 1.9941 L12: 0.3214 REMARK 3 L13: 0.7536 L23: 0.2348 REMARK 3 S TENSOR REMARK 3 S11: -0.0145 S12: 0.1519 S13: 0.0467 REMARK 3 S21: -0.3588 S22: -0.0251 S23: 0.2847 REMARK 3 S31: -0.1225 S32: -0.0852 S33: 0.0397 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 170 B 238 REMARK 3 ORIGIN FOR THE GROUP (A): 33.9310 78.1050 83.7310 REMARK 3 T TENSOR REMARK 3 T11: 0.6590 T22: 0.8391 REMARK 3 T33: 0.0969 T12: -0.1141 REMARK 3 T13: -0.1723 T23: 0.2055 REMARK 3 L TENSOR REMARK 3 L11: 8.5770 L22: 13.8008 REMARK 3 L33: 7.3364 L12: -1.9455 REMARK 3 L13: -1.3982 L23: -3.0078 REMARK 3 S TENSOR REMARK 3 S11: -0.0238 S12: 0.7813 S13: 0.0340 REMARK 3 S21: -1.6445 S22: 0.6981 S23: 0.7269 REMARK 3 S31: 0.6102 S32: -1.5612 S33: -0.6743 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3ILK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-AUG-09. REMARK 100 THE RCSB ID CODE IS RCSB054562. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97931 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36940 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 41.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.84100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD/MLPHARE/DM/ARP/WARP/HKL3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, 10%W/V PEG8000, 8%V/V REMARK 280 ETHYLENE GLYCOL, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.08350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.05550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.19600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.05550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.08350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.19600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT IS EXPERIMENTALLY REMARK 300 UNKNOWN. THE CHAINS A AND B LIKELY FORM A DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ILE A 170 REMARK 465 GLU A 239 REMARK 465 ASP A 240 REMARK 465 ASN A 241 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 ASN B 165 REMARK 465 SER B 166 REMARK 465 LEU B 167 REMARK 465 SER B 168 REMARK 465 LEU B 169 REMARK 465 GLU B 239 REMARK 465 ASP B 240 REMARK 465 ASN B 241 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A -1 CG OD1 REMARK 470 MSE A 1 CG SE CE REMARK 470 SER A 168 OG REMARK 470 LEU A 169 CG CD1 CD2 REMARK 470 GLU A 171 CG CD OE1 OE2 REMARK 470 LYS A 172 CG CD CE NZ REMARK 470 ILE B 170 CG1 CG2 CD1 REMARK 470 LYS B 172 CG CD CE NZ REMARK 470 ASN B 173 CG OD1 REMARK 470 TYR B 174 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PRO B 175 CG CD REMARK 470 LYS B 238 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 11 73.21 43.81 REMARK 500 SER A 13 -88.81 -99.40 REMARK 500 ALA A 52 31.50 -99.31 REMARK 500 ASP A 70 126.61 -39.73 REMARK 500 ILE A 115 -46.62 -137.79 REMARK 500 TYR A 137 72.54 -165.03 REMARK 500 LYS A 172 5.46 -49.90 REMARK 500 LYS A 214 80.68 59.62 REMARK 500 SER B 37 64.74 30.85 REMARK 500 ALA B 50 70.22 36.01 REMARK 500 TYR B 137 78.72 -164.80 REMARK 500 LYS B 163 -37.94 -132.65 REMARK 500 GLU B 171 130.84 174.06 REMARK 500 TYR B 174 -130.15 -146.30 REMARK 500 LYS B 214 71.57 52.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 242 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 243 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 242 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 243 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 244 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 245 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 246 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 247 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC63004 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 PRO73SER IS A CLONING MUTATION COMPARED TO THE TARGET DB SEQUENCE REMARK 999 NYSGXRC-6012A DBREF 3ILK A 1 241 UNP P44676 Y380_HAEIN 1 241 DBREF 3ILK B 1 241 UNP P44676 Y380_HAEIN 1 241 SEQADV 3ILK SER A -2 UNP P44676 EXPRESSION TAG SEQADV 3ILK ASN A -1 UNP P44676 EXPRESSION TAG SEQADV 3ILK ALA A 0 UNP P44676 EXPRESSION TAG SEQADV 3ILK SER B -2 UNP P44676 EXPRESSION TAG SEQADV 3ILK ASN B -1 UNP P44676 EXPRESSION TAG SEQADV 3ILK ALA B 0 UNP P44676 EXPRESSION TAG SEQRES 1 A 244 SER ASN ALA MSE LEU GLU ASN ILE ARG ILE VAL LEU ILE SEQRES 2 A 244 GLU THR SER HIS SER GLY ASN ILE GLY SER ALA ALA ARG SEQRES 3 A 244 ALA MSE LYS THR MSE GLY LEU THR GLN LEU CYS LEU VAL SEQRES 4 A 244 SER PRO LYS SER VAL ASP GLU GLN SER TYR ALA LEU SER SEQRES 5 A 244 ALA GLY ALA GLU ASN ILE VAL LYS ASN ALA ARG VAL VAL SEQRES 6 A 244 ASP SER PHE ASP GLU ALA VAL ASP ASP CYS SER LEU VAL SEQRES 7 A 244 ILE GLY THR SER ALA ARG LEU ARG HIS LEU GLN ASN THR SEQRES 8 A 244 LEU ILE GLU PRO ARG GLU CYS ALA GLU LYS VAL VAL ALA SEQRES 9 A 244 TYR LYS GLY LYS ILE ALA ILE VAL PHE GLY ARG GLU ARG SEQRES 10 A 244 ILE GLY LEU THR ASN GLU GLU LEU LEU LYS CYS HIS TYR SEQRES 11 A 244 HIS LEU ASN ILE PRO ALA ASN PRO ASP TYR SER SER LEU SEQRES 12 A 244 ASN LEU ALA MSE ALA VAL GLN LEU VAL SER TYR GLU LEU SEQRES 13 A 244 ARG MSE ALA PHE LEU VAL GLN ASN ASN LYS LYS ASN SER SEQRES 14 A 244 LEU SER LEU ILE GLU LYS ASN TYR PRO THR THR ASP GLN SEQRES 15 A 244 LEU ALA TYR PHE PHE ASP TYR THR GLU ARG ILE TYR GLN SEQRES 16 A 244 SER LEU GLY PHE ILE GLN ASN GLN GLY VAL MSE ARG LYS SEQRES 17 A 244 LEU LYS ARG LEU TYR TYR ARG ALA LYS LEU GLU LYS ASN SEQRES 18 A 244 GLU LEU ASN ILE LEU ASN GLY MSE LEU SER ALA VAL GLU SEQRES 19 A 244 LYS ARG ILE ASP LEU THR LYS GLU ASP ASN SEQRES 1 B 244 SER ASN ALA MSE LEU GLU ASN ILE ARG ILE VAL LEU ILE SEQRES 2 B 244 GLU THR SER HIS SER GLY ASN ILE GLY SER ALA ALA ARG SEQRES 3 B 244 ALA MSE LYS THR MSE GLY LEU THR GLN LEU CYS LEU VAL SEQRES 4 B 244 SER PRO LYS SER VAL ASP GLU GLN SER TYR ALA LEU SER SEQRES 5 B 244 ALA GLY ALA GLU ASN ILE VAL LYS ASN ALA ARG VAL VAL SEQRES 6 B 244 ASP SER PHE ASP GLU ALA VAL ASP ASP CYS SER LEU VAL SEQRES 7 B 244 ILE GLY THR SER ALA ARG LEU ARG HIS LEU GLN ASN THR SEQRES 8 B 244 LEU ILE GLU PRO ARG GLU CYS ALA GLU LYS VAL VAL ALA SEQRES 9 B 244 TYR LYS GLY LYS ILE ALA ILE VAL PHE GLY ARG GLU ARG SEQRES 10 B 244 ILE GLY LEU THR ASN GLU GLU LEU LEU LYS CYS HIS TYR SEQRES 11 B 244 HIS LEU ASN ILE PRO ALA ASN PRO ASP TYR SER SER LEU SEQRES 12 B 244 ASN LEU ALA MSE ALA VAL GLN LEU VAL SER TYR GLU LEU SEQRES 13 B 244 ARG MSE ALA PHE LEU VAL GLN ASN ASN LYS LYS ASN SER SEQRES 14 B 244 LEU SER LEU ILE GLU LYS ASN TYR PRO THR THR ASP GLN SEQRES 15 B 244 LEU ALA TYR PHE PHE ASP TYR THR GLU ARG ILE TYR GLN SEQRES 16 B 244 SER LEU GLY PHE ILE GLN ASN GLN GLY VAL MSE ARG LYS SEQRES 17 B 244 LEU LYS ARG LEU TYR TYR ARG ALA LYS LEU GLU LYS ASN SEQRES 18 B 244 GLU LEU ASN ILE LEU ASN GLY MSE LEU SER ALA VAL GLU SEQRES 19 B 244 LYS ARG ILE ASP LEU THR LYS GLU ASP ASN MODRES 3ILK MSE A 1 MET SELENOMETHIONINE MODRES 3ILK MSE A 25 MET SELENOMETHIONINE MODRES 3ILK MSE A 28 MET SELENOMETHIONINE MODRES 3ILK MSE A 144 MET SELENOMETHIONINE MODRES 3ILK MSE A 155 MET SELENOMETHIONINE MODRES 3ILK MSE A 203 MET SELENOMETHIONINE MODRES 3ILK MSE A 226 MET SELENOMETHIONINE MODRES 3ILK MSE B 1 MET SELENOMETHIONINE MODRES 3ILK MSE B 25 MET SELENOMETHIONINE MODRES 3ILK MSE B 28 MET SELENOMETHIONINE MODRES 3ILK MSE B 144 MET SELENOMETHIONINE MODRES 3ILK MSE B 155 MET SELENOMETHIONINE MODRES 3ILK MSE B 203 MET SELENOMETHIONINE MODRES 3ILK MSE B 226 MET SELENOMETHIONINE HET MSE A 1 5 HET MSE A 25 8 HET MSE A 28 8 HET MSE A 144 8 HET MSE A 155 8 HET MSE A 203 8 HET MSE A 226 8 HET MSE B 1 8 HET MSE B 25 8 HET MSE B 28 8 HET MSE B 144 8 HET MSE B 155 8 HET MSE B 203 8 HET MSE B 226 8 HET EDO A 242 4 HET EDO A 243 4 HET EDO B 242 4 HET EDO B 243 4 HET EDO B 244 4 HET ACT B 245 4 HET SO4 B 246 5 HET SO4 B 247 5 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETNAM ACT ACETATE ION HETNAM SO4 SULFATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 3 EDO 5(C2 H6 O2) FORMUL 8 ACT C2 H3 O2 1- FORMUL 9 SO4 2(O4 S 2-) FORMUL 11 HOH *119(H2 O) HELIX 1 1 HIS A 14 MSE A 28 1 15 HELIX 2 2 ASP A 42 LEU A 48 1 7 HELIX 3 3 ALA A 52 ALA A 59 1 8 HELIX 4 4 SER A 64 VAL A 69 1 6 HELIX 5 5 LEU A 82 GLN A 86 5 5 HELIX 6 6 GLU A 91 TYR A 102 1 12 HELIX 7 7 THR A 118 LYS A 124 1 7 HELIX 8 8 ASN A 141 LEU A 167 1 27 HELIX 9 9 THR A 176 LEU A 194 1 19 HELIX 10 10 GLN A 200 LYS A 214 1 15 HELIX 11 11 GLU A 216 LYS A 238 1 23 HELIX 12 12 MSE B 1 GLU B 3 5 3 HELIX 13 13 HIS B 14 MSE B 28 1 15 HELIX 14 14 ASP B 42 ALA B 50 1 9 HELIX 15 15 ALA B 52 ASN B 58 1 7 HELIX 16 16 SER B 64 VAL B 69 1 6 HELIX 17 17 LEU B 82 GLN B 86 5 5 HELIX 18 18 GLU B 91 TYR B 102 1 12 HELIX 19 19 THR B 118 LEU B 123 1 6 HELIX 20 20 ASN B 141 ASN B 162 1 22 HELIX 21 21 THR B 176 LEU B 194 1 19 HELIX 22 22 GLN B 200 LYS B 214 1 15 HELIX 23 23 GLU B 216 LEU B 236 1 21 SHEET 1 A 7 ARG A 60 VAL A 62 0 SHEET 2 A 7 GLN A 32 VAL A 36 1 N LEU A 35 O VAL A 62 SHEET 3 A 7 ILE A 5 ILE A 10 1 N ILE A 7 O GLN A 32 SHEET 4 A 7 ILE A 106 PHE A 110 1 O ILE A 106 N ARG A 6 SHEET 5 A 7 LEU A 74 THR A 78 1 N ILE A 76 O VAL A 109 SHEET 6 A 7 TYR A 127 LEU A 129 1 O LEU A 129 N GLY A 77 SHEET 7 A 7 LEU A 89 ILE A 90 1 N ILE A 90 O HIS A 128 SHEET 1 B 7 ARG B 60 VAL B 62 0 SHEET 2 B 7 GLN B 32 VAL B 36 1 N LEU B 35 O ARG B 60 SHEET 3 B 7 ILE B 5 ILE B 10 1 N ILE B 7 O GLN B 32 SHEET 4 B 7 ILE B 106 PHE B 110 1 O ILE B 108 N VAL B 8 SHEET 5 B 7 LEU B 74 THR B 78 1 N ILE B 76 O VAL B 109 SHEET 6 B 7 TYR B 127 LEU B 129 1 O LEU B 129 N GLY B 77 SHEET 7 B 7 LEU B 89 ILE B 90 1 N ILE B 90 O HIS B 128 LINK C ALA A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N LEU A 2 1555 1555 1.34 LINK C ALA A 24 N MSE A 25 1555 1555 1.32 LINK C MSE A 25 N LYS A 26 1555 1555 1.33 LINK C THR A 27 N MSE A 28 1555 1555 1.34 LINK C MSE A 28 N GLY A 29 1555 1555 1.32 LINK C ALA A 143 N MSE A 144 1555 1555 1.33 LINK C MSE A 144 N ALA A 145 1555 1555 1.34 LINK C ARG A 154 N MSE A 155 1555 1555 1.34 LINK C MSE A 155 N ALA A 156 1555 1555 1.34 LINK C VAL A 202 N MSE A 203 1555 1555 1.33 LINK C MSE A 203 N ARG A 204 1555 1555 1.34 LINK C GLY A 225 N MSE A 226 1555 1555 1.33 LINK C MSE A 226 N LEU A 227 1555 1555 1.32 LINK C MSE B 1 N LEU B 2 1555 1555 1.33 LINK C ALA B 24 N MSE B 25 1555 1555 1.32 LINK C MSE B 25 N LYS B 26 1555 1555 1.33 LINK C THR B 27 N MSE B 28 1555 1555 1.33 LINK C MSE B 28 N GLY B 29 1555 1555 1.33 LINK C ALA B 143 N MSE B 144 1555 1555 1.33 LINK C MSE B 144 N ALA B 145 1555 1555 1.33 LINK C ARG B 154 N MSE B 155 1555 1555 1.34 LINK C MSE B 155 N ALA B 156 1555 1555 1.34 LINK C VAL B 202 N MSE B 203 1555 1555 1.33 LINK C MSE B 203 N ARG B 204 1555 1555 1.33 LINK C GLY B 225 N MSE B 226 1555 1555 1.33 LINK C MSE B 226 N LEU B 227 1555 1555 1.33 SITE 1 AC1 4 THR A 78 GLY A 111 LEU A 140 EDO A 243 SITE 1 AC2 5 SER A 79 LEU A 129 ASN A 130 ILE A 131 SITE 2 AC2 5 EDO A 242 SITE 1 AC3 5 SER B 79 ASN B 130 ILE B 131 LEU B 140 SITE 2 AC3 5 SO4 B 247 SITE 1 AC4 4 SER B 73 ARG B 83 HIS B 84 HIS B 126 SITE 1 AC5 1 ASN B 141 SITE 1 AC6 5 ASN B 130 ILE B 131 PRO B 132 ALA B 133 SITE 2 AC6 5 PRO B 135 SITE 1 AC7 6 ARG A 23 HIS B 14 ASN B 17 GLU B 113 SITE 2 AC7 6 ARG B 114 ASN B 141 SITE 1 AC8 4 ARG B 112 LEU B 140 LEU B 142 EDO B 242 CRYST1 48.167 94.392 124.111 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020761 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010594 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008057 0.00000 MASTER 421 0 22 23 14 0 12 6 0 0 0 38 END