HEADER ANTIMICROBIAL PROTEIN 20-MAY-09 3HJ2 TITLE CRYSTAL STRUCTURE OF COVALENT DIMER OF HNP1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HUMAN NEUTROPHIL PEPTIDE 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 65-94; COMPND 5 SYNONYM: NEUTROPHIL DEFENSIN 1, HNP-1, HP-1, HP1, DEFENSIN, ALPHA 1, COMPND 6 HP 1-56, NEUTROPHIL DEFENSIN 2, HNP-2, HP-2, HP2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606 KEYWDS DEFENSIN, ANTIMICROBIAL, CHEMOTACTIC, CATIONIC, CYS-RICH, COVALENT KEYWDS 2 DIMER, SYNTHETIC, ANTIBIOTIC, ANTIVIRAL DEFENSE, DISULFIDE BOND, KEYWDS 3 FUNGICIDE, PHOSPHOPROTEIN, SECRETED, ANTIMICROBIAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.LUBKOWSKI,M.PAZGIER,W.LU REVDAT 2 24-JAN-18 3HJ2 1 JRNL REVDAT 1 20-OCT-09 3HJ2 0 JRNL AUTH G.WEI,E.DE LEEUW,M.PAZGIER,M.RAJABI,J.LI,G.ZOU,B.ERICKSEN, JRNL AUTH 2 Z.WU,W.YUAN,H.SZMACINSKI,W.-Y.LU,J.LUBKOWSKI,R.L.LEHRER,W.LU JRNL TITL WHAT DICTATES THE MULTIFACED FUNCTIONS OF THE HUMAN JRNL TITL 2 ALPHA-DEFENSIN HNP1? JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0057 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 10987 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 579 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 819 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1920 REMARK 3 BIN FREE R VALUE SET COUNT : 31 REMARK 3 BIN FREE R VALUE : 0.2250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 487 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 51 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.32000 REMARK 3 B22 (A**2) : -0.39000 REMARK 3 B33 (A**2) : 0.72000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.085 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.075 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.655 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 505 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 685 ; 1.857 ; 1.935 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 64 ; 7.617 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 19 ;17.594 ;17.895 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 68 ;13.398 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;12.451 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 66 ; 0.136 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 393 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 322 ; 2.108 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 499 ; 2.893 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 183 ; 3.512 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 186 ; 4.558 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 505 ; 1.994 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 51 ;10.232 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 487 ; 5.154 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 8 REMARK 3 RESIDUE RANGE : A 9 A 15 REMARK 3 RESIDUE RANGE : A 16 A 16 REMARK 3 RESIDUE RANGE : A 17 A 33 REMARK 3 ORIGIN FOR THE GROUP (A): -18.7700 10.4960 4.0630 REMARK 3 T TENSOR REMARK 3 T11: -0.1093 T22: -0.1166 REMARK 3 T33: -0.1436 T12: 0.0102 REMARK 3 T13: 0.0135 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 1.4972 L22: 10.0792 REMARK 3 L33: 2.4336 L12: -0.5639 REMARK 3 L13: 0.9644 L23: -0.8516 REMARK 3 S TENSOR REMARK 3 S11: 0.0043 S12: -0.0483 S13: 0.0071 REMARK 3 S21: 0.4582 S22: -0.0008 S23: -0.2318 REMARK 3 S31: -0.0503 S32: 0.1399 S33: -0.0036 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 8 REMARK 3 RESIDUE RANGE : B 9 B 15 REMARK 3 RESIDUE RANGE : B 16 B 16 REMARK 3 RESIDUE RANGE : B 17 B 33 REMARK 3 ORIGIN FOR THE GROUP (A): -12.5550 4.9050 -4.7320 REMARK 3 T TENSOR REMARK 3 T11: -0.1130 T22: -0.1045 REMARK 3 T33: -0.1035 T12: 0.0166 REMARK 3 T13: -0.0498 T23: -0.0284 REMARK 3 L TENSOR REMARK 3 L11: 11.5009 L22: 3.9254 REMARK 3 L33: 3.4533 L12: -3.1794 REMARK 3 L13: 1.3678 L23: -3.1816 REMARK 3 S TENSOR REMARK 3 S11: -0.2762 S12: 0.1744 S13: 0.6165 REMARK 3 S21: 0.1854 S22: 0.0123 S23: -0.3570 REMARK 3 S31: -0.1972 S32: 0.0161 S33: 0.2638 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HJ2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000053193. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : SI CRYSTAL REMARK 200 OPTICS : ROSENBAUM-ROCK MONOCHROMATOR REMARK 200 HIGH-RESOLUTION DOUBLE-CRYSTAL REMARK 200 SI(220) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11611 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 24.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : 0.06500 REMARK 200 FOR THE DATA SET : 22.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.11400 REMARK 200 R SYM FOR SHELL (I) : 0.11400 REMARK 200 FOR SHELL : 17.80 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1DFN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NA-CITRATE (PH 5.6), 0.2 M NH4 REMARK 280 -ACETATE, 30% (V/V) MPD, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 23.53500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.68500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.53500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 24.68500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 6 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 8 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 16 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 41 O HOH B 41 2555 1.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2PM1 RELATED DB: PDB REMARK 900 DERIVATIVE OF HUMAN ALPHA-DEFENSIN 1 (HNP1) REMARK 900 RELATED ID: 2PM4 RELATED DB: PDB REMARK 900 HUMAN ALPHA-DEFENSIN 1 (MULTIPLE ARG->LYS MUTANT) REMARK 900 RELATED ID: 2PM5 RELATED DB: PDB REMARK 900 HUMAN ALPHA-DEFENSIN 1 DERIVATIVE (HNP1) REMARK 900 RELATED ID: 1ZMN RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF COAGULATION FACTOR XI REMARK 900 IN COMPLEX WITH (R)-1-(4-(4-(HYDROXYMETHYL)-1,3,2-DIOXABOROLAN-2-YL) REMARK 900 PHENYL)GUANIDINE REMARK 900 RELATED ID: 1ZMQ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN ALPHA-DEFENSIN-6 REMARK 900 RELATED ID: 1ZMP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN DEFENSIN-5 REMARK 900 RELATED ID: 3HJD RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF MONOMERIC VARIANT OF HNP1 REMARK 999 REMARK 999 SEQUENCE REMARK 999 AN ARTIFICIAL N-TERMINAL CGG EXTENSION DESIGNED TO COVALENTLY LINK REMARK 999 (CYS-CYS) MONOMERS OF HNP1 DBREF 3HJ2 A 4 33 UNP P59665 DEF1_HUMAN 65 94 DBREF 3HJ2 B 4 33 UNP P59665 DEF1_HUMAN 65 94 SEQADV 3HJ2 CYS A 1 UNP P59665 SEE REMARK 999 SEQADV 3HJ2 GLY A 2 UNP P59665 SEE REMARK 999 SEQADV 3HJ2 GLY A 3 UNP P59665 SEE REMARK 999 SEQADV 3HJ2 CYS B 1 UNP P59665 SEE REMARK 999 SEQADV 3HJ2 GLY B 2 UNP P59665 SEE REMARK 999 SEQADV 3HJ2 GLY B 3 UNP P59665 SEE REMARK 999 SEQRES 1 A 33 CYS GLY GLY ALA CYS TYR CYS ARG ILE PRO ALA CYS ILE SEQRES 2 A 33 ALA GLY GLU ARG ARG TYR GLY THR CYS ILE TYR GLN GLY SEQRES 3 A 33 ARG LEU TRP ALA PHE CYS CYS SEQRES 1 B 33 CYS GLY GLY ALA CYS TYR CYS ARG ILE PRO ALA CYS ILE SEQRES 2 B 33 ALA GLY GLU ARG ARG TYR GLY THR CYS ILE TYR GLN GLY SEQRES 3 B 33 ARG LEU TRP ALA PHE CYS CYS FORMUL 3 HOH *51(H2 O) SHEET 1 A 6 TYR A 6 ARG A 8 0 SHEET 2 A 6 ARG A 27 CYS A 32 -1 O CYS A 32 N TYR A 6 SHEET 3 A 6 ARG A 18 TYR A 24 -1 N CYS A 22 O TRP A 29 SHEET 4 A 6 ARG B 17 TYR B 24 -1 O ILE B 23 N THR A 21 SHEET 5 A 6 ARG B 27 CYS B 33 -1 O PHE B 31 N TYR B 19 SHEET 6 A 6 TYR B 6 ARG B 8 -1 N TYR B 6 O CYS B 32 SSBOND 1 CYS A 1 CYS B 1 1555 1555 2.03 SSBOND 2 CYS A 5 CYS A 33 1555 1555 2.08 SSBOND 3 CYS A 7 CYS A 22 1555 1555 2.06 SSBOND 4 CYS A 12 CYS A 32 1555 1555 2.04 SSBOND 5 CYS B 5 CYS B 33 1555 1555 2.06 SSBOND 6 CYS B 7 CYS B 22 1555 1555 2.05 SSBOND 7 CYS B 12 CYS B 32 1555 1555 2.04 CISPEP 1 ILE A 9 PRO A 10 0 9.86 CISPEP 2 ILE B 9 PRO B 10 0 9.11 CRYST1 47.070 49.370 24.990 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021247 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020256 0.000000 0.00000 SCALE3 0.000000 0.000000 0.040024 0.00000 MASTER 333 0 0 0 6 0 0 6 0 0 0 6 END