HEADER DE NOVO PROTEIN 10-MAY-09 3HEZ TITLE EXPLORING BACKBONE PATTERN IN ALPHA/BETA-PEPTIDE HELIX BUNDLES: THE TITLE 2 GCN4-PLI SIDE CHAIN SEQUENCE ON DIFFERENT (ALPHA-ALPHA-ALPHA-BETA) TITLE 3 BACKBONES COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA/BETA PEPTIDE WITH THE GCN4-PLI SIDE CHAIN SEQUENCE ON COMPND 3 AN (ALPHA-ALPHA-ALPHA-BETA) BACKBONE; COMPND 4 CHAIN: A, B, C; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: SYNTHETIC PEPTIDE KEYWDS HELIX BUNDLE, FOLDAMER, ALPHA/BETA-PEPTIDE, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR W.S.HORNE,S.H.GELLMAN REVDAT 2 13-JUL-11 3HEZ 1 VERSN REVDAT 1 19-MAY-09 3HEZ 0 JRNL AUTH W.S.HORNE,S.H.GELLMAN JRNL TITL EXPLORING BACKBONE PATTERN IN GCN4-PLI ALPHA/BETA-PEPTIDE JRNL TITL 2 HELIX BUNDLES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 6377 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 319 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 441 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.48 REMARK 3 BIN R VALUE (WORKING SET) : 0.1750 REMARK 3 BIN FREE R VALUE SET COUNT : 26 REMARK 3 BIN FREE R VALUE : 0.3510 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 877 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 38 REMARK 3 SOLVENT ATOMS : 130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.42000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : -0.71000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.26000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.231 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.169 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.114 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.042 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 948 ; 0.009 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 750 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1251 ; 1.644 ; 2.223 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1839 ; 1.163 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 58 ; 3.850 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 35 ;32.724 ;22.857 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 168 ;13.774 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;19.245 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 137 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 824 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 157 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 161 ; 0.181 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 816 ; 0.217 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 343 ; 0.164 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 596 ; 0.079 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 93 ; 0.186 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 16 ; 0.174 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 70 ; 0.243 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.186 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 575 ; 0.649 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 233 ; 0.153 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 848 ; 1.030 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 431 ; 1.793 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 398 ; 2.930 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HEZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAY-09. REMARK 100 THE RCSB ID CODE IS RCSB053052. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-APR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GOBEL MIRRORS REMARK 200 OPTICS : CONFOCAL MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER SMART 6000 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PROTEUM PLUS REMARK 200 DATA SCALING SOFTWARE : PROTEUM PLUS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6732 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 22.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04700 REMARK 200 FOR THE DATA SET : 20.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.9 REMARK 200 DATA REDUNDANCY IN SHELL : 1.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.13000 REMARK 200 FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1GCM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.5, 25% V/V TERT- REMARK 280 BUTANOL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 21.54100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 B3Q A 4 CD CE NF2 OF1 REMARK 470 LYS B 3 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HO6 TAM B 34 O HOH B 138 1.43 REMARK 500 O ACE A 0 O HOH A 135 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 H12 B3Q B 4 HH22 ARG C 33 1656 1.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 B3Q A 4 -75.40 -17.93 REMARK 500 B3K A 8 -79.53 -17.29 REMARK 500 BIL A 12 -72.12 -18.78 REMARK 500 B3L A 16 -82.00 -2.92 REMARK 500 B3E A 20 -81.78 -11.64 REMARK 500 B3A A 24 -77.11 -20.77 REMARK 500 B3K A 28 -78.89 -15.07 REMARK 500 B3E A 32 -3.56 70.85 REMARK 500 B3Q B 4 -68.78 -28.09 REMARK 500 B3K B 8 -78.05 -17.80 REMARK 500 BIL B 12 -79.23 -8.19 REMARK 500 B3L B 16 -90.04 -10.17 REMARK 500 B3E B 20 -74.59 -11.76 REMARK 500 B3A B 24 -77.25 -18.23 REMARK 500 B3K B 28 -73.68 -14.21 REMARK 500 B3E B 32 -87.97 137.93 REMARK 500 B3Q C 4 -75.39 -16.10 REMARK 500 B3K C 8 -77.83 -19.70 REMARK 500 BIL C 12 -77.56 -15.44 REMARK 500 B3L C 16 -87.93 -8.22 REMARK 500 B3E C 20 -82.64 -8.27 REMARK 500 B3A C 24 -76.88 -22.61 REMARK 500 B3K C 28 -75.54 -21.98 REMARK 500 B3E C 32 103.46 -39.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 3 B3Q A 4 136.79 REMARK 500 ASP A 7 B3K A 8 135.58 REMARK 500 GLU A 11 BIL A 12 139.02 REMARK 500 LYS A 15 B3L A 16 141.98 REMARK 500 ILE A 19 B3E A 20 135.41 REMARK 500 LEU A 23 B3A A 24 135.42 REMARK 500 LYS A 27 B3K A 28 133.94 REMARK 500 GLY A 31 B3E A 32 138.41 REMARK 500 LYS B 3 B3Q B 4 141.12 REMARK 500 ASP B 7 B3K B 8 135.91 REMARK 500 GLU B 11 BIL B 12 138.05 REMARK 500 LYS B 15 B3L B 16 136.99 REMARK 500 ILE B 19 B3E B 20 136.77 REMARK 500 LEU B 23 B3A B 24 135.03 REMARK 500 LYS B 27 B3K B 28 138.22 REMARK 500 GLY B 31 B3E B 32 135.34 REMARK 500 LYS C 3 B3Q C 4 141.14 REMARK 500 ASP C 7 B3K C 8 138.10 REMARK 500 GLU C 11 BIL C 12 132.98 REMARK 500 LYS C 15 B3L C 16 132.35 REMARK 500 ILE C 19 B3E C 20 136.58 REMARK 500 LEU C 23 B3A C 24 139.01 REMARK 500 LYS C 27 B3K C 28 138.87 REMARK 500 GLY C 31 B3E C 32 131.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 B3Q A 4 -109.6 L D WRONG HAND REMARK 500 BIL A 12 -109.2 L D WRONG HAND REMARK 500 B3L A 16 -108.5 L D WRONG HAND REMARK 500 B3Q B 4 -116.8 L D WRONG HAND REMARK 500 BIL B 12 -108.6 L D WRONG HAND REMARK 500 B3L B 16 -106.7 L D WRONG HAND REMARK 500 B3Q C 4 -116.7 L D WRONG HAND REMARK 500 BIL C 12 -101.9 L D WRONG HAND REMARK 500 B3L C 16 -99.7 L D WRONG HAND REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TBU A 34 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 35 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 36 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TBU A 37 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TAM B 34 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3C3F RELATED DB: PDB REMARK 900 ALPHA/BETA-PEPTIDE HELIX BUNDLES: THE GCN4-PLI SIDE CHAIN REMARK 900 SEQUENCE ON AN (ALPHA-ALPHA-ALPHA-BETA) BACKBONE DBREF 3HEZ A 0 33 PDB 3HEZ 3HEZ 0 33 DBREF 3HEZ B 0 33 PDB 3HEZ 3HEZ 0 33 DBREF 3HEZ C 0 33 PDB 3HEZ 3HEZ 0 33 SEQRES 1 A 34 ACE ARG MET LYS B3Q ILE GLU ASP B3K LEU GLU GLU BIL SEQRES 2 A 34 LEU SER LYS B3L TYR HIS ILE B3E ASN GLU LEU B3A ARG SEQRES 3 A 34 ILE LYS B3K LEU LEU GLY B3E ARG SEQRES 1 B 34 ACE ARG MET LYS B3Q ILE GLU ASP B3K LEU GLU GLU BIL SEQRES 2 B 34 LEU SER LYS B3L TYR HIS ILE B3E ASN GLU LEU B3A ARG SEQRES 3 B 34 ILE LYS B3K LEU LEU GLY B3E ARG SEQRES 1 C 34 ACE ARG MET LYS B3Q ILE GLU ASP B3K LEU GLU GLU BIL SEQRES 2 C 34 LEU SER LYS B3L TYR HIS ILE B3E ASN GLU LEU B3A ARG SEQRES 3 C 34 ILE LYS B3K LEU LEU GLY B3E ARG MODRES 3HEZ B3K A 8 LYS (3S)-3,7-DIAMINOHEPTANOIC ACID MODRES 3HEZ B3E A 20 GLU (3S)-3-AMINOHEXANEDIOIC ACID MODRES 3HEZ B3A A 24 ALA (3S)-3-AMINOBUTANOIC ACID MODRES 3HEZ B3K A 28 LYS (3S)-3,7-DIAMINOHEPTANOIC ACID MODRES 3HEZ B3E A 32 GLU (3S)-3-AMINOHEXANEDIOIC ACID MODRES 3HEZ B3K B 8 LYS (3S)-3,7-DIAMINOHEPTANOIC ACID MODRES 3HEZ B3E B 20 GLU (3S)-3-AMINOHEXANEDIOIC ACID MODRES 3HEZ B3A B 24 ALA (3S)-3-AMINOBUTANOIC ACID MODRES 3HEZ B3K B 28 LYS (3S)-3,7-DIAMINOHEPTANOIC ACID MODRES 3HEZ B3E B 32 GLU (3S)-3-AMINOHEXANEDIOIC ACID MODRES 3HEZ B3K C 8 LYS (3S)-3,7-DIAMINOHEPTANOIC ACID MODRES 3HEZ B3E C 20 GLU (3S)-3-AMINOHEXANEDIOIC ACID MODRES 3HEZ B3A C 24 ALA (3S)-3-AMINOBUTANOIC ACID MODRES 3HEZ B3K C 28 LYS (3S)-3,7-DIAMINOHEPTANOIC ACID MODRES 3HEZ B3E C 32 GLU (3S)-3-AMINOHEXANEDIOIC ACID HET ACE A 0 6 HET B3Q A 4 12 HET B3K A 8 25 HET BIL A 12 22 HET B3L A 16 22 HET B3E A 20 18 HET B3A A 24 13 HET B3K A 28 25 HET B3E A 32 18 HET ACE B 0 6 HET B3Q B 4 20 HET B3K B 8 25 HET BIL B 12 35 HET B3L B 16 22 HET B3E B 20 18 HET B3A B 24 13 HET B3K B 28 25 HET B3E B 32 18 HET ACE C 0 6 HET B3Q C 4 20 HET B3K C 8 25 HET BIL C 12 22 HET B3L C 16 22 HET B3E C 20 18 HET B3A C 24 13 HET B3K C 28 25 HET B3E C 32 18 HET TBU A 34 6 HET GOL A 35 14 HET GOL A 36 14 HET TBU A 37 6 HET TAM B 34 28 HET TBU C 34 6 HETNAM ACE ACETYL GROUP HETNAM B3Q (3S)-3,6-DIAMINO-6-OXOHEXANOIC ACID HETNAM B3K (3S)-3,7-DIAMINOHEPTANOIC ACID HETNAM BIL (3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID HETNAM B3L (3S)-3-AMINO-5-METHYLHEXANOIC ACID HETNAM B3E (3S)-3-AMINOHEXANEDIOIC ACID HETNAM B3A (3S)-3-AMINOBUTANOIC ACID HETNAM TBU TERTIARY-BUTYL ALCOHOL HETNAM GOL GLYCEROL HETNAM TAM TRIS(HYDROXYETHYL)AMINOMETHANE HETSYN B3Q (S)-BETA-3-HOMOGLUTAMINE HETSYN BIL (R,S)-BETA-3-HOMOISOLEUCINE HETSYN B3L (S)-BETA-3-HOMOLEUCINE HETSYN TBU 2-METHYL-2-PROPANOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 ACE 3(C2 H4 O) FORMUL 1 B3Q 3(C6 H12 N2 O3) FORMUL 1 B3K 6(C7 H16 N2 O2) FORMUL 1 BIL 3(C7 H15 N O2) FORMUL 1 B3L 3(C7 H15 N O2) FORMUL 1 B3E 6(C6 H11 N O4) FORMUL 1 B3A 3(C4 H9 N O2) FORMUL 4 TBU 3(C4 H10 O) FORMUL 5 GOL 2(C3 H8 O3) FORMUL 8 TAM C7 H17 N O3 FORMUL 10 HOH *130(H2 O) HELIX 1 1 ARG A 1 LEU A 30 1 30 HELIX 2 2 ARG B 1 LEU B 30 1 30 HELIX 3 3 ARG C 1 LEU C 30 1 30 LINK C ACE A 0 N ARG A 1 1555 1555 1.34 LINK C LYS A 3 N B3Q A 4 1555 1555 1.33 LINK C B3Q A 4 N ILE A 5 1555 1555 1.33 LINK C ASP A 7 N B3K A 8 1555 1555 1.33 LINK C B3K A 8 N LEU A 9 1555 1555 1.33 LINK C GLU A 11 N BIL A 12 1555 1555 1.33 LINK C BIL A 12 N LEU A 13 1555 1555 1.33 LINK C LYS A 15 N B3L A 16 1555 1555 1.32 LINK C B3L A 16 N TYR A 17 1555 1555 1.32 LINK C ILE A 19 N B3E A 20 1555 1555 1.34 LINK C B3E A 20 N ASN A 21 1555 1555 1.33 LINK C LEU A 23 N B3A A 24 1555 1555 1.34 LINK C B3A A 24 N ARG A 25 1555 1555 1.33 LINK C LYS A 27 N B3K A 28 1555 1555 1.34 LINK C B3K A 28 N LEU A 29 1555 1555 1.34 LINK C GLY A 31 N B3E A 32 1555 1555 1.33 LINK C B3E A 32 N ARG A 33 1555 1555 1.35 LINK C ACE B 0 N ARG B 1 1555 1555 1.33 LINK C LYS B 3 N B3Q B 4 1555 1555 1.33 LINK C B3Q B 4 N ILE B 5 1555 1555 1.34 LINK C ASP B 7 N B3K B 8 1555 1555 1.32 LINK C B3K B 8 N LEU B 9 1555 1555 1.33 LINK C GLU B 11 N BIL B 12 1555 1555 1.32 LINK C BIL B 12 N LEU B 13 1555 1555 1.32 LINK C LYS B 15 N B3L B 16 1555 1555 1.34 LINK C B3L B 16 N TYR B 17 1555 1555 1.33 LINK C ILE B 19 N B3E B 20 1555 1555 1.33 LINK C B3E B 20 N ASN B 21 1555 1555 1.32 LINK C LEU B 23 N B3A B 24 1555 1555 1.33 LINK C B3A B 24 N ARG B 25 1555 1555 1.34 LINK C LYS B 27 N B3K B 28 1555 1555 1.32 LINK C B3K B 28 N LEU B 29 1555 1555 1.33 LINK C GLY B 31 N B3E B 32 1555 1555 1.34 LINK C B3E B 32 N ARG B 33 1555 1555 1.33 LINK C ACE C 0 N ARG C 1 1555 1555 1.32 LINK C LYS C 3 N B3Q C 4 1555 1555 1.34 LINK C B3Q C 4 N ILE C 5 1555 1555 1.33 LINK C ASP C 7 N B3K C 8 1555 1555 1.33 LINK C B3K C 8 N LEU C 9 1555 1555 1.32 LINK C GLU C 11 N BIL C 12 1555 1555 1.34 LINK C BIL C 12 N LEU C 13 1555 1555 1.33 LINK C LYS C 15 N B3L C 16 1555 1555 1.32 LINK C B3L C 16 N TYR C 17 1555 1555 1.32 LINK C ILE C 19 N B3E C 20 1555 1555 1.32 LINK C B3E C 20 N ASN C 21 1555 1555 1.33 LINK C LEU C 23 N B3A C 24 1555 1555 1.33 LINK C B3A C 24 N ARG C 25 1555 1555 1.32 LINK C LYS C 27 N B3K C 28 1555 1555 1.34 LINK C B3K C 28 N LEU C 29 1555 1555 1.34 LINK C GLY C 31 N B3E C 32 1555 1555 1.33 LINK C B3E C 32 N ARG C 33 1555 1555 1.34 SITE 1 AC1 5 GLU A 6 LEU A 9 HOH A 115 B3K C 8 SITE 2 AC1 5 HOH C 35 SITE 1 AC2 4 LYS A 27 ARG A 33 GLU C 22 ARG C 25 SITE 1 AC3 4 LYS A 15 B3L B 16 TYR B 17 B3E B 20 SITE 1 AC4 1 GLU A 22 SITE 1 AC5 4 ARG A 1 GLU B 10 LEU B 13 HOH B 138 CRYST1 31.817 43.082 37.001 90.00 96.00 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.031430 0.000000 0.003303 0.00000 SCALE2 0.000000 0.023212 0.000000 0.00000 SCALE3 0.000000 0.000000 0.027175 0.00000 MASTER 391 0 33 3 0 0 6 6 0 0 0 9 END