HEADER HYDROLASE 18-FEB-09 3GB0 TITLE CRYSTAL STRUCTURE OF AMINOPEPTIDASE PEPT (NP_980509.1) FROM BACILLUS TITLE 2 CEREUS ATCC 10987 AT 2.04 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDASE T; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.11.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS CEREUS ATCC 10987; SOURCE 3 ORGANISM_TAXID: 222523; SOURCE 4 ATCC: 10987; SOURCE 5 GENE: BCE_4216, NP_980509.1, PEPT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS NP_980509.1, AMINOPEPTIDASE PEPT, PEPTIDASE FAMILY M20/M25/M40, KEYWDS 2 STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 3 PROTEIN STRUCTURE INITIATIVE, PSI-2, AMINOPEPTIDASE, HYDROLASE, KEYWDS 4 METAL-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 24-JUL-19 3GB0 1 REMARK LINK REVDAT 3 01-NOV-17 3GB0 1 REMARK REVDAT 2 13-JUL-11 3GB0 1 VERSN REVDAT 1 03-MAR-09 3GB0 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF AMINOPEPTIDASE PEPT (NP_980509.1) FROM JRNL TITL 2 BACILLUS CEREUS ATCC 10987 AT 2.04 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0053 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.46 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 26590 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1340 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.04 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.09 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1833 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.2820 REMARK 3 BIN FREE R VALUE SET COUNT : 97 REMARK 3 BIN FREE R VALUE : 0.2860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2761 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 45 REMARK 3 SOLVENT ATOMS : 214 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 25.03 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.65000 REMARK 3 B22 (A**2) : 2.59000 REMARK 3 B33 (A**2) : -1.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.28000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.169 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.153 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.104 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.698 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2866 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1887 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3872 ; 1.635 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4659 ; 0.957 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 380 ; 4.046 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 115 ;30.442 ;25.652 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 486 ;10.344 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ; 9.757 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 457 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3205 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 514 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1854 ; 1.765 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 776 ; 0.513 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2990 ; 2.774 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1012 ; 5.531 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 879 ; 7.882 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 372 REMARK 3 ORIGIN FOR THE GROUP (A): 19.5085 47.4294 22.1964 REMARK 3 T TENSOR REMARK 3 T11: 0.0065 T22: 0.0108 REMARK 3 T33: 0.0178 T12: 0.0005 REMARK 3 T13: 0.0069 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 0.4776 L22: 0.1956 REMARK 3 L33: 0.4460 L12: 0.1350 REMARK 3 L13: 0.2214 L23: 0.0577 REMARK 3 S TENSOR REMARK 3 S11: 0.0123 S12: -0.0066 S13: 0.0450 REMARK 3 S21: 0.0227 S22: -0.0115 S23: 0.0073 REMARK 3 S31: -0.0201 S32: 0.0031 S33: -0.0008 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS REMARK 3 ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE REMARK 3 ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED REMARK 3 SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. GLYCEROL REMARK 3 (GOL) AND POLYETHYLENE GLYCOL (PEG) FRAGMENTS FROM THE REMARK 3 CRYSTALLIZATION CONDITION HAVE BEEN MODELED IN THE SOLVENT REMARK 3 STRUCTURE. 5. RESIDUES ASP107-ASP108 FORM A CIS-PEPTIDE WHICH IS REMARK 3 SUPPORTED BY ELECTRON DENSITY. THIS IS IN THE PUTATIVE ACTIVE REMARK 3 SITE AND MAY BE FUNCTIONALLY RELEVANT INDICATING THE POSSIBILITY REMARK 3 OF CARBOHYDRATE BINDING. REMARK 4 REMARK 4 3GB0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1000051642. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JAN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91162, 0.97959 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, TOROID REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26596 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.040 REMARK 200 RESOLUTION RANGE LOW (A) : 29.463 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.55600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 10.0% GLYCEROL, 5.0% PEG REMARK 280 1000, 30.0% PEG 600, 0.1M MES PH 6.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 70.65550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.07350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 70.65550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.07350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUGGESTS THAT A DIMER IS THE REMARK 300 STABLE OLIGOMERIC FORM IN SOLUTION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 22 CE NZ REMARK 470 LYS A 88 CD CE NZ REMARK 470 LYS A 92 CD CE NZ REMARK 470 LYS A 189 CD CE NZ REMARK 470 LYS A 199 CE NZ REMARK 470 LYS A 273 CD CE NZ REMARK 470 LYS A 308 NZ REMARK 470 LYS A 372 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 19 55.68 -146.12 REMARK 500 LYS A 22 -18.94 91.38 REMARK 500 PHE A 23 50.12 -119.12 REMARK 500 ASP A 46 41.80 -109.55 REMARK 500 LEU A 163 67.59 -111.63 REMARK 500 ASP A 164 56.90 -157.89 REMARK 500 VAL A 195 -67.41 -90.08 REMARK 500 THR A 234 -64.92 -120.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 373 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 374 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 375 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 376 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 377 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 378 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 379 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 375071 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3GB0 A 1 372 UNP Q731F0 Q731F0_BACC1 1 372 SEQADV 3GB0 GLY A 0 UNP Q731F0 LEADER SEQUENCE SEQRES 1 A 373 GLY MSE ILE ASN GLN GLU ARG LEU VAL ASN GLU PHE MSE SEQRES 2 A 373 GLU LEU VAL GLN VAL ASP SER GLU THR LYS PHE GLU ALA SEQRES 3 A 373 GLU ILE CYS LYS VAL LEU THR LYS LYS PHE THR ASP LEU SEQRES 4 A 373 GLY VAL GLU VAL PHE GLU ASP ASP THR MSE ALA VAL THR SEQRES 5 A 373 GLY HIS GLY ALA GLY ASN LEU ILE CYS THR LEU PRO ALA SEQRES 6 A 373 THR LYS ASP GLY VAL ASP THR ILE TYR PHE THR SER HIS SEQRES 7 A 373 MSE ASP THR VAL VAL PRO GLY ASN GLY ILE LYS PRO SER SEQRES 8 A 373 ILE LYS ASP GLY TYR ILE VAL SER ASP GLY THR THR ILE SEQRES 9 A 373 LEU GLY ALA ASP ASP LYS ALA GLY LEU ALA SER MSE PHE SEQRES 10 A 373 GLU ALA ILE ARG VAL LEU LYS GLU LYS ASN ILE PRO HIS SEQRES 11 A 373 GLY THR ILE GLU PHE ILE ILE THR VAL GLY GLU GLU SER SEQRES 12 A 373 GLY LEU VAL GLY ALA LYS ALA LEU ASP ARG GLU ARG ILE SEQRES 13 A 373 THR ALA LYS TYR GLY TYR ALA LEU ASP SER ASP GLY LYS SEQRES 14 A 373 VAL GLY GLU ILE VAL VAL ALA ALA PRO THR GLN ALA LYS SEQRES 15 A 373 VAL ASN ALA ILE ILE ARG GLY LYS THR ALA HIS ALA GLY SEQRES 16 A 373 VAL ALA PRO GLU LYS GLY VAL SER ALA ILE THR ILE ALA SEQRES 17 A 373 ALA LYS ALA ILE ALA LYS MSE PRO LEU GLY ARG ILE ASP SEQRES 18 A 373 SER GLU THR THR ALA ASN ILE GLY ARG PHE GLU GLY GLY SEQRES 19 A 373 THR GLN THR ASN ILE VAL CYS ASP HIS VAL GLN ILE PHE SEQRES 20 A 373 ALA GLU ALA ARG SER LEU ILE ASN GLU LYS MSE GLU ALA SEQRES 21 A 373 GLN VAL ALA LYS MSE LYS GLU ALA PHE GLU THR THR ALA SEQRES 22 A 373 LYS GLU MSE GLY GLY HIS ALA ASP VAL GLU VAL ASN VAL SEQRES 23 A 373 MSE TYR PRO GLY PHE LYS PHE ALA ASP GLY ASP HIS VAL SEQRES 24 A 373 VAL GLU VAL ALA LYS ARG ALA ALA GLU LYS ILE GLY ARG SEQRES 25 A 373 THR PRO SER LEU HIS GLN SER GLY GLY GLY SER ASP ALA SEQRES 26 A 373 ASN VAL ILE ALA GLY HIS GLY ILE PRO THR VAL ASN LEU SEQRES 27 A 373 ALA VAL GLY TYR GLU GLU ILE HIS THR THR ASN GLU LYS SEQRES 28 A 373 ILE PRO VAL GLU GLU LEU ALA LYS THR ALA GLU LEU VAL SEQRES 29 A 373 VAL ALA ILE ILE GLU GLU VAL ALA LYS MODRES 3GB0 MSE A 1 MET SELENOMETHIONINE MODRES 3GB0 MSE A 12 MET SELENOMETHIONINE MODRES 3GB0 MSE A 48 MET SELENOMETHIONINE MODRES 3GB0 MSE A 78 MET SELENOMETHIONINE MODRES 3GB0 MSE A 115 MET SELENOMETHIONINE MODRES 3GB0 MSE A 214 MET SELENOMETHIONINE MODRES 3GB0 MSE A 257 MET SELENOMETHIONINE MODRES 3GB0 MSE A 264 MET SELENOMETHIONINE MODRES 3GB0 MSE A 275 MET SELENOMETHIONINE MODRES 3GB0 MSE A 286 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 12 8 HET MSE A 48 8 HET MSE A 78 8 HET MSE A 115 8 HET MSE A 214 8 HET MSE A 257 8 HET MSE A 264 8 HET MSE A 275 8 HET MSE A 286 8 HET GOL A 373 6 HET GOL A 374 6 HET GOL A 375 6 HET GOL A 376 6 HET PEG A 377 7 HET PEG A 378 7 HET PEG A 379 7 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 2 GOL 4(C3 H8 O3) FORMUL 6 PEG 3(C4 H10 O3) FORMUL 9 HOH *214(H2 O) HELIX 1 1 ASN A 3 GLN A 16 1 14 HELIX 2 2 GLU A 24 LEU A 38 1 15 HELIX 3 3 THR A 47 GLY A 52 1 6 HELIX 4 4 GLY A 105 LYS A 125 1 21 HELIX 5 5 GLY A 139 GLY A 143 5 5 HELIX 6 6 LEU A 144 LEU A 150 1 7 HELIX 7 7 ASP A 151 ILE A 155 5 5 HELIX 8 8 ALA A 196 GLY A 200 5 5 HELIX 9 9 SER A 202 ALA A 212 1 11 HELIX 10 10 ILE A 253 MSE A 275 1 23 HELIX 11 11 ASP A 296 ILE A 309 1 14 HELIX 12 12 SER A 322 HIS A 330 1 9 HELIX 13 13 VAL A 353 LYS A 372 1 20 SHEET 1 A 8 GLU A 41 GLU A 44 0 SHEET 2 A 8 LEU A 58 LEU A 62 -1 O ILE A 59 N PHE A 43 SHEET 3 A 8 ILE A 132 THR A 137 -1 O PHE A 134 N CYS A 60 SHEET 4 A 8 ILE A 72 HIS A 77 1 N PHE A 74 O ILE A 135 SHEET 5 A 8 TYR A 159 SER A 165 1 O LEU A 163 N THR A 75 SHEET 6 A 8 THR A 334 ALA A 338 1 O LEU A 337 N ALA A 162 SHEET 7 A 8 GLU A 171 ALA A 176 -1 N VAL A 173 O ASN A 336 SHEET 8 A 8 PHE A 290 LYS A 291 -1 O PHE A 290 N ALA A 176 SHEET 1 B 8 GLU A 41 GLU A 44 0 SHEET 2 B 8 LEU A 58 LEU A 62 -1 O ILE A 59 N PHE A 43 SHEET 3 B 8 ILE A 132 THR A 137 -1 O PHE A 134 N CYS A 60 SHEET 4 B 8 ILE A 72 HIS A 77 1 N PHE A 74 O ILE A 135 SHEET 5 B 8 TYR A 159 SER A 165 1 O LEU A 163 N THR A 75 SHEET 6 B 8 THR A 334 ALA A 338 1 O LEU A 337 N ALA A 162 SHEET 7 B 8 GLU A 171 ALA A 176 -1 N VAL A 173 O ASN A 336 SHEET 8 B 8 SER A 314 GLN A 317 1 O SER A 314 N ILE A 172 SHEET 1 C 3 SER A 90 LYS A 92 0 SHEET 2 C 3 TYR A 95 VAL A 97 -1 O VAL A 97 N SER A 90 SHEET 3 C 3 LYS A 350 PRO A 352 -1 O ILE A 351 N ILE A 96 SHEET 1 D 5 GLY A 217 ASP A 220 0 SHEET 2 D 5 THR A 223 GLY A 232 -1 O ALA A 225 N GLY A 217 SHEET 3 D 5 HIS A 242 SER A 251 -1 O GLN A 244 N GLU A 231 SHEET 4 D 5 THR A 178 ARG A 187 -1 N THR A 178 O SER A 251 SHEET 5 D 5 HIS A 278 TYR A 287 -1 O GLU A 282 N ASN A 183 LINK C GLY A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N ILE A 2 1555 1555 1.33 LINK C PHE A 11 N MSE A 12 1555 1555 1.32 LINK C MSE A 12 N GLU A 13 1555 1555 1.33 LINK C THR A 47 N MSE A 48 1555 1555 1.33 LINK C MSE A 48 N ALA A 49 1555 1555 1.33 LINK C HIS A 77 N MSE A 78 1555 1555 1.33 LINK C MSE A 78 N ASP A 79 1555 1555 1.34 LINK C SER A 114 N MSE A 115 1555 1555 1.34 LINK C MSE A 115 N PHE A 116 1555 1555 1.34 LINK C LYS A 213 N MSE A 214 1555 1555 1.34 LINK C MSE A 214 N PRO A 215 1555 1555 1.35 LINK C LYS A 256 N MSE A 257 1555 1555 1.33 LINK C MSE A 257 N GLU A 258 1555 1555 1.32 LINK C LYS A 263 N MSE A 264 1555 1555 1.34 LINK C MSE A 264 N LYS A 265 1555 1555 1.33 LINK C GLU A 274 N MSE A 275 1555 1555 1.33 LINK C MSE A 275 N GLY A 276 1555 1555 1.33 LINK C VAL A 285 N MSE A 286 1555 1555 1.34 LINK C MSE A 286 N TYR A 287 1555 1555 1.33 CISPEP 1 VAL A 82 PRO A 83 0 -0.50 CISPEP 2 ASP A 107 ASP A 108 0 7.87 SITE 1 AC1 7 GLN A 179 HIS A 192 ASN A 237 ARG A 250 SITE 2 AC1 7 TYR A 287 GLY A 321 HOH A 438 SITE 1 AC2 9 THR A 36 VAL A 40 VAL A 42 PHE A 292 SITE 2 AC2 9 ALA A 328 ILE A 332 PRO A 333 GOL A 375 SITE 3 AC2 9 HOH A 446 SITE 1 AC3 8 GLY A 39 ASN A 254 GLY A 289 GOL A 374 SITE 2 AC3 8 HOH A 396 HOH A 440 HOH A 460 HOH A 533 SITE 1 AC4 5 ASP A 18 SER A 19 GLU A 20 PHE A 23 SITE 2 AC4 5 ASN A 85 SITE 1 AC5 4 GLY A 194 VAL A 195 GLN A 317 SER A 318 SITE 1 AC6 4 ASP A 37 ARG A 152 HIS A 330 HOH A 471 SITE 1 AC7 3 LYS A 92 TYR A 95 LYS A 350 CRYST1 141.311 58.147 51.368 90.00 91.75 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007077 0.000000 0.000216 0.00000 SCALE2 0.000000 0.017198 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019476 0.00000 MASTER 350 0 17 13 24 0 12 6 0 0 0 29 END