HEADER TRANSFERASE 10-FEB-09 3G7I TITLE CRYSTAL STRUCTURE OF A DELTA CLASS GST (ADGSTD4-4) FROM ANOPHELES TITLE 2 DIRUS, WITH GLUTATHIONE COMPLEXED IN ONE SUBUNIT COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE TRANSFERASE GST1-4; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ADGSTD4-4; COMPND 5 EC: 2.5.1.18; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANOPHELES DIRUS; SOURCE 3 ORGANISM_TAXID: 7168; SOURCE 4 GENE: GSTD4; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS ENZYME-SUBSTRATE COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.WONGSANTICHON,R.C.ROBINSON,A.J.KETTERMAN REVDAT 4 08-JUL-15 3G7I 1 JRNL REVDAT 3 21-MAR-12 3G7I 1 HET REVDAT 2 13-JUL-11 3G7I 1 VERSN REVDAT 1 16-FEB-10 3G7I 0 JRNL AUTH J.WONGSANTICHON,R.C.ROBINSON,A.J.KETTERMAN JRNL TITL STRUCTURAL EVIDENCE FOR CONFORMATIONAL CHANGES OF DELTA JRNL TITL 2 CLASS GLUTATHIONE TRANSFERASES AFTER LIGAND BINDING JRNL REF ARCH.BIOCHEM.BIOPHYS. V. 521 77 2012 JRNL REFN ISSN 0003-9861 JRNL PMID 22475449 JRNL DOI 10.1016/J.ABB.2012.03.023 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 24328 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1303 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1684 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.2070 REMARK 3 BIN FREE R VALUE SET COUNT : 93 REMARK 3 BIN FREE R VALUE : 0.2610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3297 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 183 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.55000 REMARK 3 B22 (A**2) : 0.55000 REMARK 3 B33 (A**2) : -0.82000 REMARK 3 B12 (A**2) : 0.27000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.245 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.198 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.132 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.300 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3397 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4613 ; 1.201 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 407 ; 5.493 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 175 ;38.807 ;23.314 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 530 ;14.672 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;19.586 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 491 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2672 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1687 ; 0.191 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2339 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 211 ; 0.163 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 41 ; 0.191 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.274 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2097 ; 0.600 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3280 ; 0.992 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1489 ; 1.570 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1333 ; 2.437 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 217 REMARK 3 ORIGIN FOR THE GROUP (A): -10.8670 22.1930 33.4568 REMARK 3 T TENSOR REMARK 3 T11: -0.0162 T22: -0.2230 REMARK 3 T33: -0.2440 T12: 0.0621 REMARK 3 T13: 0.0234 T23: -0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.8923 L22: 4.4010 REMARK 3 L33: 3.3004 L12: 0.7594 REMARK 3 L13: 0.5897 L23: -0.2235 REMARK 3 S TENSOR REMARK 3 S11: 0.0655 S12: -0.1194 S13: -0.0195 REMARK 3 S21: 0.5807 S22: 0.0253 S23: -0.2111 REMARK 3 S31: -0.0799 S32: -0.0257 S33: -0.0908 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 213 REMARK 3 ORIGIN FOR THE GROUP (A): -5.6622 18.6815 11.2861 REMARK 3 T TENSOR REMARK 3 T11: -0.1731 T22: -0.1985 REMARK 3 T33: -0.2020 T12: 0.0255 REMARK 3 T13: 0.0160 T23: -0.0263 REMARK 3 L TENSOR REMARK 3 L11: 1.9181 L22: 4.0196 REMARK 3 L33: 3.5656 L12: -0.5991 REMARK 3 L13: 0.0721 L23: -1.0212 REMARK 3 S TENSOR REMARK 3 S11: 0.0110 S12: 0.1893 S13: 0.1431 REMARK 3 S21: -0.1346 S22: -0.0112 S23: -0.4004 REMARK 3 S31: 0.1182 S32: 0.3100 S33: 0.0002 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3G7I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-FEB-09. REMARK 100 THE RCSB ID CODE IS RCSB051520. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26234 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05300 REMARK 200 FOR THE DATA SET : 36.5520 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.1 REMARK 200 DATA REDUNDANCY IN SHELL : 9.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.17700 REMARK 200 FOR SHELL : 11.940 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1JLW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CACODYLATE PH 6.6, 30% (W/ REMARK 280 V) PEG 4000, 0.15M SODIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 181.36600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 90.68300 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 90.68300 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 181.36600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 38 REMARK 465 MET A 39 REMARK 465 LYS A 40 REMARK 465 PRO A 41 REMARK 465 GLU A 42 REMARK 465 PHE A 43 REMARK 465 LEU A 44 REMARK 465 LYS A 45 REMARK 465 LEU A 46 REMARK 465 GLN A 218 REMARK 465 LYS A 219 REMARK 465 GLN B 121 REMARK 465 ILE B 122 REMARK 465 PHE B 123 REMARK 465 GLY B 124 REMARK 465 GLN B 125 REMARK 465 LYS B 126 REMARK 465 VAL B 127 REMARK 465 PRO B 128 REMARK 465 VAL B 129 REMARK 465 GLY B 130 REMARK 465 ARG B 214 REMARK 465 TYR B 215 REMARK 465 PHE B 216 REMARK 465 THR B 217 REMARK 465 GLN B 218 REMARK 465 LYS B 219 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 65 102.64 75.30 REMARK 500 TYR A 89 70.45 -156.57 REMARK 500 VAL A 109 -61.12 -125.95 REMARK 500 PHE A 216 71.70 -115.01 REMARK 500 HIS B 50 58.45 39.47 REMARK 500 GLU B 65 106.94 74.82 REMARK 500 VAL B 109 -60.29 -124.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 TYR B 119 24.0 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH B 220 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1JLW RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN AN APO FORM REMARK 900 RELATED ID: 3F63 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH S-HEXYL GLUTATHIONE REMARK 900 RELATED ID: 3G7J RELATED DB: PDB REMARK 900 THE Y119E MUTATION OF THE SAME PROTEIN IN COMPLEX WITH S- REMARK 900 HEXYL GLUTATHIONE DBREF 3G7I A 1 219 UNP Q9GN60 Q9GN60_9DIPT 1 219 DBREF 3G7I B 1 219 UNP Q9GN60 Q9GN60_9DIPT 1 219 SEQRES 1 A 219 MET ASP PHE TYR TYR LEU PRO GLY SER ALA PRO CYS ARG SEQRES 2 A 219 ALA VAL GLN MET THR ALA ALA ALA VAL GLY VAL GLU LEU SEQRES 3 A 219 ASN LEU LYS LEU THR ASN LEU MET ALA GLY GLU HIS MET SEQRES 4 A 219 LYS PRO GLU PHE LEU LYS LEU ASN PRO GLN HIS CYS ILE SEQRES 5 A 219 PRO THR LEU VAL ASP GLU ASP GLY PHE VAL LEU TRP GLU SEQRES 6 A 219 SER ARG ALA ILE GLN ILE TYR LEU VAL GLU LYS TYR GLY SEQRES 7 A 219 ALA HIS ASP ALA ASP LEU ALA GLU ARG LEU TYR PRO SER SEQRES 8 A 219 ASP PRO ARG ARG ARG ALA VAL VAL HIS GLN ARG LEU PHE SEQRES 9 A 219 PHE ASP VAL ALA VAL LEU TYR GLN ARG PHE ALA GLU TYR SEQRES 10 A 219 TYR TYR PRO GLN ILE PHE GLY GLN LYS VAL PRO VAL GLY SEQRES 11 A 219 ASP PRO GLY ARG LEU ARG SER MET GLU GLN ALA LEU GLU SEQRES 12 A 219 PHE LEU ASN THR PHE LEU GLU GLY GLU GLN TYR VAL ALA SEQRES 13 A 219 GLY GLY ASP ASP PRO THR ILE ALA ASP LEU SER ILE LEU SEQRES 14 A 219 ALA THR ILE ALA THR TYR GLU VAL ALA GLY TYR ASP LEU SEQRES 15 A 219 ARG ARG TYR GLU ASN VAL GLN ARG TRP TYR GLU ARG THR SEQRES 16 A 219 SER ALA ILE VAL PRO GLY ALA ASP LYS ASN VAL GLU GLY SEQRES 17 A 219 ALA LYS VAL PHE GLY ARG TYR PHE THR GLN LYS SEQRES 1 B 219 MET ASP PHE TYR TYR LEU PRO GLY SER ALA PRO CYS ARG SEQRES 2 B 219 ALA VAL GLN MET THR ALA ALA ALA VAL GLY VAL GLU LEU SEQRES 3 B 219 ASN LEU LYS LEU THR ASN LEU MET ALA GLY GLU HIS MET SEQRES 4 B 219 LYS PRO GLU PHE LEU LYS LEU ASN PRO GLN HIS CYS ILE SEQRES 5 B 219 PRO THR LEU VAL ASP GLU ASP GLY PHE VAL LEU TRP GLU SEQRES 6 B 219 SER ARG ALA ILE GLN ILE TYR LEU VAL GLU LYS TYR GLY SEQRES 7 B 219 ALA HIS ASP ALA ASP LEU ALA GLU ARG LEU TYR PRO SER SEQRES 8 B 219 ASP PRO ARG ARG ARG ALA VAL VAL HIS GLN ARG LEU PHE SEQRES 9 B 219 PHE ASP VAL ALA VAL LEU TYR GLN ARG PHE ALA GLU TYR SEQRES 10 B 219 TYR TYR PRO GLN ILE PHE GLY GLN LYS VAL PRO VAL GLY SEQRES 11 B 219 ASP PRO GLY ARG LEU ARG SER MET GLU GLN ALA LEU GLU SEQRES 12 B 219 PHE LEU ASN THR PHE LEU GLU GLY GLU GLN TYR VAL ALA SEQRES 13 B 219 GLY GLY ASP ASP PRO THR ILE ALA ASP LEU SER ILE LEU SEQRES 14 B 219 ALA THR ILE ALA THR TYR GLU VAL ALA GLY TYR ASP LEU SEQRES 15 B 219 ARG ARG TYR GLU ASN VAL GLN ARG TRP TYR GLU ARG THR SEQRES 16 B 219 SER ALA ILE VAL PRO GLY ALA ASP LYS ASN VAL GLU GLY SEQRES 17 B 219 ALA LYS VAL PHE GLY ARG TYR PHE THR GLN LYS HET GSH B 220 20 HETNAM GSH GLUTATHIONE FORMUL 3 GSH C10 H17 N3 O6 S FORMUL 4 HOH *183(H2 O) HELIX 1 1 SER A 9 GLY A 23 1 15 HELIX 2 2 GLU A 65 GLY A 78 1 14 HELIX 3 3 ASP A 81 TYR A 89 1 9 HELIX 4 4 ASP A 92 VAL A 109 1 18 HELIX 5 5 VAL A 109 PHE A 123 1 15 HELIX 6 6 ASP A 131 LEU A 149 1 19 HELIX 7 7 THR A 162 ALA A 178 1 17 HELIX 8 8 ASP A 181 ARG A 184 5 4 HELIX 9 9 TYR A 185 ALA A 197 1 13 HELIX 10 10 GLY A 201 GLY A 213 1 13 HELIX 11 11 ARG A 214 PHE A 216 5 3 HELIX 12 12 SER B 9 GLY B 23 1 15 HELIX 13 13 GLY B 36 MET B 39 5 4 HELIX 14 14 LYS B 40 ASN B 47 1 8 HELIX 15 15 GLU B 65 TYR B 77 1 13 HELIX 16 16 GLY B 78 HIS B 80 5 3 HELIX 17 17 ASP B 81 TYR B 89 1 9 HELIX 18 18 ASP B 92 VAL B 109 1 18 HELIX 19 19 VAL B 109 TYR B 119 1 11 HELIX 20 20 ASP B 131 LEU B 149 1 19 HELIX 21 21 THR B 162 GLY B 179 1 18 HELIX 22 22 ASP B 181 ARG B 184 5 4 HELIX 23 23 TYR B 185 VAL B 199 1 15 HELIX 24 24 GLY B 201 PHE B 212 1 12 SHEET 1 A 4 ASN A 27 LEU A 30 0 SHEET 2 A 4 ASP A 2 TYR A 5 1 N PHE A 3 O LYS A 29 SHEET 3 A 4 THR A 54 VAL A 56 -1 O THR A 54 N TYR A 4 SHEET 4 A 4 VAL A 62 TRP A 64 -1 O LEU A 63 N LEU A 55 SHEET 1 B 4 ASN B 27 LEU B 30 0 SHEET 2 B 4 ASP B 2 TYR B 5 1 N PHE B 3 O LYS B 29 SHEET 3 B 4 THR B 54 VAL B 56 -1 O THR B 54 N TYR B 4 SHEET 4 B 4 VAL B 62 TRP B 64 -1 O LEU B 63 N LEU B 55 CISPEP 1 ILE A 52 PRO A 53 0 7.42 CISPEP 2 ILE B 52 PRO B 53 0 3.15 SITE 1 AC1 17 SER B 9 PRO B 11 HIS B 38 HIS B 50 SITE 2 AC1 17 CYS B 51 ILE B 52 PRO B 53 GLU B 65 SITE 3 AC1 17 SER B 66 ARG B 67 VAL B 107 HOH B 232 SITE 4 AC1 17 HOH B 233 HOH B 259 HOH B 287 HOH B 297 SITE 5 AC1 17 HOH B 380 CRYST1 50.378 50.378 272.049 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019850 0.011460 0.000000 0.00000 SCALE2 0.000000 0.022921 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003676 0.00000 MASTER 374 0 1 24 8 0 5 6 0 0 0 34 END