HEADER FLAVOPROTEIN 17-JAN-09 3FW8 TITLE STRUCTURE OF BERBERINE BRIDGE ENZYME, C166A VARIANT CAVEAT 3FW8 MAN B 3 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RETICULINE OXIDASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BERBERINE BRIDGE-FORMING ENZYME, BBE, COMPND 5 TETRAHYDROPROTOBERBERINE SYNTHASE; COMPND 6 EC: 1.21.3.3; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHSCHOLZIA CALIFORNICA; SOURCE 3 ORGANISM_COMMON: CALIFORNIA POPPY; SOURCE 4 ORGANISM_TAXID: 3467; SOURCE 5 GENE: BBE1; SOURCE 6 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: KM71H; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPICZA KEYWDS BI-COVALENT FLAVINYLATION, N-GLYCOSYLATION, ALAKLOID BIOSYNTHESIS, KEYWDS 2 OXIDOREDUCTASE, ALKALOID METABOLISM, CYTOPLASMIC VESICLE, FAD, KEYWDS 3 FLAVOPROTEIN, GLYCOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.WINKLER,P.MACHEROUX,K.GRUBER REVDAT 4 20-OCT-21 3FW8 1 SEQADV HETSYN REVDAT 3 29-JUL-20 3FW8 1 CAVEAT COMPND REMARK HETNAM REVDAT 3 2 1 LINK SITE ATOM REVDAT 2 13-JUL-11 3FW8 1 VERSN REVDAT 1 19-MAY-09 3FW8 0 JRNL AUTH A.WINKLER,K.MOTZ,S.RIEDL,M.PUHL,P.MACHEROUX,K.GRUBER JRNL TITL STRUCTURAL ROLES OF BIOCOVALENT FLANINYLATION IN BERBERINE JRNL TITL 2 BRIDGE ENZYME JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.WINKLER,A.LYSKOWSKI,S.RIEDL,M.PUHL,T.M.KUTCHAN, REMARK 1 AUTH 2 P.MACHEROUX,K.GRUBER REMARK 1 TITL A CONCERTED MECHANISM FOR BERBERINE BRIDGE ENZYME. REMARK 1 REF NAT. CHEM. BIOL. V. 4 739 2008 REMARK 1 REFN ISSN 1552-4450 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 96810 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 4875 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.0340 - 4.6590 0.98 3356 175 0.1750 0.1880 REMARK 3 2 4.6590 - 3.6990 1.00 3200 177 0.1450 0.1590 REMARK 3 3 3.6990 - 3.2310 1.00 3167 170 0.1590 0.1740 REMARK 3 4 3.2310 - 2.9360 1.00 3125 182 0.1750 0.1770 REMARK 3 5 2.9360 - 2.7260 1.00 3107 156 0.1780 0.2050 REMARK 3 6 2.7260 - 2.5650 1.00 3071 177 0.1740 0.2030 REMARK 3 7 2.5650 - 2.4360 1.00 3100 170 0.1680 0.1870 REMARK 3 8 2.4360 - 2.3300 1.00 3061 167 0.1710 0.1860 REMARK 3 9 2.3300 - 2.2410 1.00 3084 146 0.1670 0.1970 REMARK 3 10 2.2410 - 2.1630 1.00 3066 157 0.1610 0.2160 REMARK 3 11 2.1630 - 2.0960 1.00 3052 174 0.1640 0.1680 REMARK 3 12 2.0960 - 2.0360 1.00 3057 142 0.1630 0.1980 REMARK 3 13 2.0360 - 1.9820 1.00 3065 155 0.1600 0.1840 REMARK 3 14 1.9820 - 1.9340 1.00 3065 165 0.1630 0.1810 REMARK 3 15 1.9340 - 1.8900 1.00 3047 169 0.1580 0.1730 REMARK 3 16 1.8900 - 1.8500 1.00 3032 160 0.1610 0.1890 REMARK 3 17 1.8500 - 1.8130 1.00 3023 151 0.1610 0.1770 REMARK 3 18 1.8130 - 1.7780 1.00 3000 185 0.1670 0.1950 REMARK 3 19 1.7780 - 1.7470 1.00 3053 155 0.1620 0.2120 REMARK 3 20 1.7470 - 1.7170 1.00 3023 167 0.1590 0.1780 REMARK 3 21 1.7170 - 1.6890 1.00 3034 165 0.1600 0.1900 REMARK 3 22 1.6890 - 1.6630 1.00 3037 152 0.1610 0.1960 REMARK 3 23 1.6630 - 1.6390 1.00 3031 144 0.1590 0.1790 REMARK 3 24 1.6390 - 1.6160 1.00 3035 157 0.1530 0.1670 REMARK 3 25 1.6160 - 1.5940 1.00 3010 164 0.1660 0.1780 REMARK 3 26 1.5940 - 1.5730 1.00 3002 142 0.1690 0.1970 REMARK 3 27 1.5730 - 1.5540 1.00 3070 153 0.1720 0.1990 REMARK 3 28 1.5540 - 1.5350 1.00 2973 162 0.1800 0.1960 REMARK 3 29 1.5350 - 1.5170 1.00 3036 165 0.1800 0.2130 REMARK 3 30 1.5170 - 1.5000 1.00 2953 171 0.1880 0.2230 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 56.96 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.07100 REMARK 3 B22 (A**2) : -6.07100 REMARK 3 B33 (A**2) : -6.44800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 4307 REMARK 3 ANGLE : 1.028 5883 REMARK 3 CHIRALITY : 0.067 647 REMARK 3 PLANARITY : 0.005 741 REMARK 3 DIHEDRAL : 18.346 1589 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 26:114) REMARK 3 ORIGIN FOR THE GROUP (A): -18.3918 -2.2867 -33.2342 REMARK 3 T TENSOR REMARK 3 T11: 0.1744 T22: 0.2750 REMARK 3 T33: 0.1620 T12: 0.0280 REMARK 3 T13: -0.0140 T23: -0.0101 REMARK 3 L TENSOR REMARK 3 L11: 0.8670 L22: 0.8777 REMARK 3 L33: 0.5399 L12: -0.1656 REMARK 3 L13: -0.1386 L23: 0.3371 REMARK 3 S TENSOR REMARK 3 S11: 0.0516 S12: 0.2596 S13: -0.0620 REMARK 3 S21: -0.1464 S22: -0.0411 S23: -0.0551 REMARK 3 S31: -0.0095 S32: 0.0517 S33: -0.0086 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 115:244) REMARK 3 ORIGIN FOR THE GROUP (A): -16.9289 8.1533 -13.9505 REMARK 3 T TENSOR REMARK 3 T11: 0.1554 T22: 0.1589 REMARK 3 T33: 0.1524 T12: -0.0193 REMARK 3 T13: 0.0024 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 0.7485 L22: 0.5312 REMARK 3 L33: 0.5813 L12: -0.0528 REMARK 3 L13: 0.0847 L23: 0.1280 REMARK 3 S TENSOR REMARK 3 S11: 0.0823 S12: 0.0373 S13: 0.0180 REMARK 3 S21: 0.0150 S22: 0.0012 S23: -0.0251 REMARK 3 S31: -0.0405 S32: 0.0818 S33: -0.0593 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 245:350) REMARK 3 ORIGIN FOR THE GROUP (A): -27.6585 -7.2123 4.2501 REMARK 3 T TENSOR REMARK 3 T11: 0.1619 T22: 0.1544 REMARK 3 T33: 0.1647 T12: -0.0302 REMARK 3 T13: -0.0183 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 1.6332 L22: 0.3900 REMARK 3 L33: 0.4866 L12: 0.5760 REMARK 3 L13: 0.0766 L23: -0.3073 REMARK 3 S TENSOR REMARK 3 S11: 0.0820 S12: -0.2232 S13: -0.0294 REMARK 3 S21: 0.0487 S22: -0.0592 S23: 0.0409 REMARK 3 S31: 0.0823 S32: -0.0088 S33: -0.0278 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 351:465) REMARK 3 ORIGIN FOR THE GROUP (A): -39.1416 -3.6561 -10.4814 REMARK 3 T TENSOR REMARK 3 T11: 0.1442 T22: 0.1774 REMARK 3 T33: 0.1723 T12: -0.0139 REMARK 3 T13: -0.0038 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 0.8874 L22: 0.6422 REMARK 3 L33: 0.6218 L12: 0.5026 REMARK 3 L13: -0.1403 L23: -0.1849 REMARK 3 S TENSOR REMARK 3 S11: 0.0331 S12: 0.0927 S13: -0.0187 REMARK 3 S21: -0.0100 S22: 0.0589 S23: 0.0262 REMARK 3 S31: 0.0298 S32: -0.0822 S33: -0.0788 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 466:520) REMARK 3 ORIGIN FOR THE GROUP (A): -36.3714 13.1803 -27.5931 REMARK 3 T TENSOR REMARK 3 T11: 0.2098 T22: 0.2356 REMARK 3 T33: 0.2112 T12: 0.0647 REMARK 3 T13: 0.0129 T23: 0.0739 REMARK 3 L TENSOR REMARK 3 L11: 0.7580 L22: -0.0583 REMARK 3 L33: 1.1674 L12: -0.0840 REMARK 3 L13: -0.0264 L23: -0.3236 REMARK 3 S TENSOR REMARK 3 S11: 0.1660 S12: 0.2162 S13: 0.1855 REMARK 3 S21: -0.0393 S22: 0.0226 S23: 0.1208 REMARK 3 S31: -0.2569 S32: -0.2746 S33: -0.1715 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3FW8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000051119. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 118784 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.390 REMARK 200 RESOLUTION RANGE LOW (A) : 47.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 11.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07500 REMARK 200 FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.3 REMARK 200 DATA REDUNDANCY IN SHELL : 9.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.93200 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3D2J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUMCHLORIDE, 30% PEG-4000, REMARK 280 0.1 M TRIS/HCL, PH 8.5, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 123.53500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.54500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.54500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 61.76750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.54500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.54500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 185.30250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.54500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.54500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 61.76750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.54500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.54500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 185.30250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 123.53500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1026 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 101 -81.38 -107.67 REMARK 500 TYR A 111 19.86 -146.60 REMARK 500 ALA A 163 -169.74 -160.74 REMARK 500 LEU A 273 150.64 -49.67 REMARK 500 GLU A 287 -120.70 54.35 REMARK 500 GLU A 287 -120.54 54.09 REMARK 500 PHE A 313 57.37 -147.57 REMARK 500 PHE A 392 -135.14 -95.44 REMARK 500 ARG A 409 -122.16 -117.61 REMARK 500 HIS A 459 47.82 -103.97 REMARK 500 HIS A 459 49.46 -104.91 REMARK 500 LEU A 491 -128.04 45.83 REMARK 500 ASP A 505 59.95 -144.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 523 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 45 OD1 REMARK 620 2 ASP A 47 OD1 75.1 REMARK 620 3 HOH A1089 O 160.9 86.6 REMARK 620 4 HOH A1090 O 87.3 59.2 78.7 REMARK 620 5 HOH A1091 O 119.8 150.4 74.5 94.2 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3D2D RELATED DB: PDB REMARK 900 RELATED ID: 3D2H RELATED DB: PDB REMARK 900 RELATED ID: 3D2J RELATED DB: PDB REMARK 900 RELATED ID: 3FW7 RELATED DB: PDB DBREF 3FW8 A 26 520 UNP P30986 RETO_ESCCA 26 520 SEQADV 3FW8 ALA A 166 UNP P30986 CYS 166 ENGINEERED MUTATION SEQRES 1 A 495 ASP LEU LEU SER CYS LEU THR PHE ASN GLY VAL ARG ASN SEQRES 2 A 495 HIS THR VAL PHE SER ALA ASP SER ASP SER ASP PHE ASN SEQRES 3 A 495 ARG PHE LEU HIS LEU SER ILE GLN ASN PRO LEU PHE GLN SEQRES 4 A 495 ASN SER LEU ILE SER LYS PRO SER ALA ILE ILE LEU PRO SEQRES 5 A 495 GLY SER LYS GLU GLU LEU SER ASN THR ILE ARG CYS ILE SEQRES 6 A 495 ARG LYS GLY SER TRP THR ILE ARG LEU ARG SER GLY GLY SEQRES 7 A 495 HIS SER TYR GLU GLY LEU SER TYR THR SER ASP THR PRO SEQRES 8 A 495 PHE ILE LEU ILE ASP LEU MET ASN LEU ASN ARG VAL SER SEQRES 9 A 495 ILE ASP LEU GLU SER GLU THR ALA TRP VAL GLU SER GLY SEQRES 10 A 495 SER THR LEU GLY GLU LEU TYR TYR ALA ILE THR GLU SER SEQRES 11 A 495 SER SER LYS LEU GLY PHE THR ALA GLY TRP ALA PRO THR SEQRES 12 A 495 VAL GLY THR GLY GLY HIS ILE SER GLY GLY GLY PHE GLY SEQRES 13 A 495 MET MET SER ARG LYS TYR GLY LEU ALA ALA ASP ASN VAL SEQRES 14 A 495 VAL ASP ALA ILE LEU ILE ASP ALA ASN GLY ALA ILE LEU SEQRES 15 A 495 ASP ARG GLN ALA MET GLY GLU ASP VAL PHE TRP ALA ILE SEQRES 16 A 495 ARG GLY GLY GLY GLY GLY VAL TRP GLY ALA ILE TYR ALA SEQRES 17 A 495 TRP LYS ILE LYS LEU LEU PRO VAL PRO GLU LYS VAL THR SEQRES 18 A 495 VAL PHE ARG VAL THR LYS ASN VAL ALA ILE ASP GLU ALA SEQRES 19 A 495 THR SER LEU LEU HIS LYS TRP GLN PHE VAL ALA GLU GLU SEQRES 20 A 495 LEU GLU GLU ASP PHE THR LEU SER VAL LEU GLY GLY ALA SEQRES 21 A 495 ASP GLU LYS GLN VAL TRP LEU THR MET LEU GLY PHE HIS SEQRES 22 A 495 PHE GLY LEU LYS THR VAL ALA LYS SER THR PHE ASP LEU SEQRES 23 A 495 LEU PHE PRO GLU LEU GLY LEU VAL GLU GLU ASP TYR LEU SEQRES 24 A 495 GLU MET SER TRP GLY GLU SER PHE ALA TYR LEU ALA GLY SEQRES 25 A 495 LEU GLU THR VAL SER GLN LEU ASN ASN ARG PHE LEU LYS SEQRES 26 A 495 PHE ASP GLU ARG ALA PHE LYS THR LYS VAL ASP LEU THR SEQRES 27 A 495 LYS GLU PRO LEU PRO SER LYS ALA PHE TYR GLY LEU LEU SEQRES 28 A 495 GLU ARG LEU SER LYS GLU PRO ASN GLY PHE ILE ALA LEU SEQRES 29 A 495 ASN GLY PHE GLY GLY GLN MET SER LYS ILE SER SER ASP SEQRES 30 A 495 PHE THR PRO PHE PRO HIS ARG SER GLY THR ARG LEU MET SEQRES 31 A 495 VAL GLU TYR ILE VAL ALA TRP ASN GLN SER GLU GLN LYS SEQRES 32 A 495 LYS LYS THR GLU PHE LEU ASP TRP LEU GLU LYS VAL TYR SEQRES 33 A 495 GLU PHE MET LYS PRO PHE VAL SER LYS ASN PRO ARG LEU SEQRES 34 A 495 GLY TYR VAL ASN HIS ILE ASP LEU ASP LEU GLY GLY ILE SEQRES 35 A 495 ASP TRP GLY ASN LYS THR VAL VAL ASN ASN ALA ILE GLU SEQRES 36 A 495 ILE SER ARG SER TRP GLY GLU SER TYR PHE LEU SER ASN SEQRES 37 A 495 TYR GLU ARG LEU ILE ARG ALA LYS THR LEU ILE ASP PRO SEQRES 38 A 495 ASN ASN VAL PHE ASN HIS PRO GLN SER ILE PRO PRO MET SEQRES 39 A 495 ALA MODRES 3FW8 ASN A 38 ASN GLYCOSYLATION SITE MODRES 3FW8 ASN A 471 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET MAN B 3 11 HET FAD A 1 53 HET NAG A 522 14 HET MG A 523 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM MG MAGNESIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 3(C8 H15 N O6) FORMUL 2 MAN C6 H12 O6 FORMUL 3 FAD C27 H33 N9 O15 P2 FORMUL 5 MG MG 2+ FORMUL 6 HOH *590(H2 O) HELIX 1 1 ASP A 26 ASN A 34 1 9 HELIX 2 2 SER A 48 SER A 57 1 10 HELIX 3 3 ASN A 60 GLN A 64 5 5 HELIX 4 4 SER A 79 GLY A 93 1 15 HELIX 5 5 THR A 144 SER A 156 1 13 HELIX 6 6 GLY A 170 GLY A 177 1 8 HELIX 7 7 MET A 183 GLY A 188 1 6 HELIX 8 8 LEU A 189 ASP A 192 5 4 HELIX 9 9 ASP A 208 GLY A 213 1 6 HELIX 10 10 GLY A 213 ARG A 221 1 9 HELIX 11 11 ALA A 255 LEU A 273 1 19 HELIX 12 12 LEU A 301 PHE A 313 1 13 HELIX 13 13 PRO A 314 GLY A 317 5 4 HELIX 14 14 VAL A 319 TYR A 323 5 5 HELIX 15 15 SER A 327 ALA A 336 1 10 HELIX 16 16 THR A 340 ASN A 346 5 7 HELIX 17 17 PRO A 368 LYS A 381 1 14 HELIX 18 18 GLY A 393 LYS A 398 5 6 HELIX 19 19 ASN A 423 LYS A 428 5 6 HELIX 20 20 LYS A 429 LYS A 445 1 17 HELIX 21 21 PRO A 446 VAL A 448 5 3 HELIX 22 22 TYR A 456 ILE A 460 5 5 HELIX 23 23 ASP A 461 GLY A 465 5 5 HELIX 24 24 ASN A 471 ASN A 477 1 7 HELIX 25 25 ASN A 477 LEU A 491 1 15 HELIX 26 26 ASN A 493 ASP A 505 1 13 SHEET 1 A 4 HIS A 39 VAL A 41 0 SHEET 2 A 4 ALA A 73 ILE A 75 -1 O ILE A 74 N THR A 40 SHEET 3 A 4 PHE A 117 ASP A 121 1 O LEU A 119 N ILE A 75 SHEET 4 A 4 THR A 96 ARG A 100 1 N ARG A 98 O ILE A 120 SHEET 1 B 5 VAL A 128 ASP A 131 0 SHEET 2 B 5 THR A 136 GLU A 140 -1 O TRP A 138 N SER A 129 SHEET 3 B 5 ALA A 230 LYS A 237 -1 O TRP A 234 N VAL A 139 SHEET 4 B 5 VAL A 194 ILE A 200 -1 N ILE A 198 O TYR A 232 SHEET 5 B 5 ILE A 206 LEU A 207 -1 O LEU A 207 N LEU A 199 SHEET 1 C 2 LEU A 159 GLY A 160 0 SHEET 2 C 2 LEU A 239 PRO A 240 -1 O LEU A 239 N GLY A 160 SHEET 1 D 7 LEU A 324 MET A 326 0 SHEET 2 D 7 VAL A 245 VAL A 254 -1 N VAL A 245 O MET A 326 SHEET 3 D 7 GLN A 289 HIS A 298 -1 O LEU A 292 N LYS A 252 SHEET 4 D 7 PHE A 277 ASP A 286 -1 N LEU A 282 O THR A 293 SHEET 5 D 7 GLY A 385 GLY A 391 -1 O LEU A 389 N VAL A 281 SHEET 6 D 7 LEU A 414 TRP A 422 -1 O GLU A 417 N ALA A 388 SHEET 7 D 7 ALA A 355 LEU A 362 -1 N LYS A 359 O TYR A 418 SSBOND 1 CYS A 30 CYS A 89 1555 1555 2.04 LINK C8M FAD A 1 ND1 HIS A 104 1555 1555 1.53 LINK ND2 ASN A 38 C1 NAG B 1 1555 1555 1.44 LINK ND2 ASN A 471 C1 NAG A 522 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O4 NAG B 2 C1 MAN B 3 1555 1555 1.44 LINK OD1 ASP A 45 MG MG A 523 1555 1555 2.31 LINK OD1 ASP A 47 MG MG A 523 1555 1555 2.34 LINK MG MG A 523 O HOH A1089 1555 1555 1.94 LINK MG MG A 523 O HOH A1090 1555 1555 2.11 LINK MG MG A 523 O HOH A1091 1555 1555 2.17 CISPEP 1 ASN A 451 PRO A 452 0 1.22 CRYST1 69.090 69.090 247.070 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014474 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014474 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004047 0.00000 MASTER 375 0 6 26 18 0 0 6 0 0 0 39 END