HEADER FLAVOPROTEIN, OXIDOREDUCTASE 05-JAN-09 3FPK TITLE CRYSTAL STRUCTURE OF FERREDOXIN-NADP REDUCTASE FROM SALMONELLA TITLE 2 TYPHIMURIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERREDOXIN-NADP REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.18.1.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM; SOURCE 3 ORGANISM_TAXID: 99287; SOURCE 4 STRAIN: LT2; SOURCE 5 GENE: FPR, STM4084; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3-MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS CSGID, ALPHA-BETA-ROLL, FAD BINDING FOLD, STRUCTURAL GENOMICS, CENTER KEYWDS 2 FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, FLAVOPROTEIN, KEYWDS 3 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,M.GU,J.STAM,W.F.ANDERSON,A.JOACHIMIAK,CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 3 13-JUL-11 3FPK 1 VERSN REVDAT 2 05-MAY-09 3FPK 1 REMARK REVDAT 1 03-FEB-09 3FPK 0 JRNL AUTH Y.KIM,M.GU,J.STAM,W.F.ANDERSON,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF FERREDOXIN-NADP REDUCTASE FROM JRNL TITL 2 SALMONELLA TYPHIMURIUM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0053 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.15 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 55695 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2968 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3615 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.53 REMARK 3 BIN R VALUE (WORKING SET) : 0.3150 REMARK 3 BIN FREE R VALUE SET COUNT : 214 REMARK 3 BIN FREE R VALUE : 0.3530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3894 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 109 REMARK 3 SOLVENT ATOMS : 711 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 26.89 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.40000 REMARK 3 B22 (A**2) : -0.17000 REMARK 3 B33 (A**2) : -0.23000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.112 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.115 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.081 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.250 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4286 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5870 ; 1.688 ; 1.998 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 528 ; 6.414 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 193 ;40.820 ;23.886 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 716 ;14.220 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 33 ;18.593 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 646 ; 0.119 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3285 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2578 ; 0.868 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4195 ; 1.425 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1708 ; 2.567 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1675 ; 4.135 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 248 REMARK 3 ORIGIN FOR THE GROUP (A): -4.3835 -12.9179 25.0701 REMARK 3 T TENSOR REMARK 3 T11: 0.0359 T22: 0.0127 REMARK 3 T33: 0.0379 T12: -0.0072 REMARK 3 T13: 0.0092 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.5020 L22: 0.3093 REMARK 3 L33: 0.4293 L12: -0.0430 REMARK 3 L13: -0.1392 L23: -0.0386 REMARK 3 S TENSOR REMARK 3 S11: 0.0036 S12: 0.0146 S13: -0.0097 REMARK 3 S21: -0.0600 S22: 0.0131 S23: -0.0100 REMARK 3 S31: -0.0193 S32: -0.0167 S33: -0.0167 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 248 REMARK 3 ORIGIN FOR THE GROUP (A): -3.1945 -11.8040 58.4242 REMARK 3 T TENSOR REMARK 3 T11: 0.0014 T22: 0.0697 REMARK 3 T33: 0.0419 T12: -0.0030 REMARK 3 T13: 0.0026 T23: -0.0027 REMARK 3 L TENSOR REMARK 3 L11: 0.4649 L22: 0.7956 REMARK 3 L33: 0.9395 L12: -0.1493 REMARK 3 L13: 0.1745 L23: -0.1277 REMARK 3 S TENSOR REMARK 3 S11: 0.0207 S12: -0.0735 S13: -0.0003 REMARK 3 S21: 0.0073 S22: 0.0221 S23: -0.0189 REMARK 3 S31: -0.0031 S32: 0.0554 S33: -0.0428 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3FPK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JAN-09. REMARK 100 THE RCSB ID CODE IS RCSB050882. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MITTORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59191 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 43.150 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.76800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL3000, MOLREP, BALBES REMARK 200 STARTING MODEL: 1FDR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M CALCIUM CHLORIDE, 0.1 M TRIS PH REMARK 280 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.71150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.81500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.99450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.81500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.71150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.99450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: DIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN B 89 O HOH B 605 2.02 REMARK 500 OE1 GLN A 89 O HOH A 619 2.11 REMARK 500 OD1 ASP A 93 O HOH A 306 2.14 REMARK 500 OD2 ASP B 101 O HOH B 276 2.15 REMARK 500 OE1 GLU A 245 O HOH A 318 2.15 REMARK 500 O HOH B 259 O HOH B 637 2.15 REMARK 500 OE1 GLU A 163 O HOH A 686 2.16 REMARK 500 CB ALA B 2 O HOH B 459 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 SER A 76 24.6 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 287 DISTANCE = 7.79 ANGSTROMS REMARK 525 HOH A 371 DISTANCE = 7.20 ANGSTROMS REMARK 525 HOH A 396 DISTANCE = 5.24 ANGSTROMS REMARK 525 HOH A 428 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH A 429 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH A 469 DISTANCE = 5.14 ANGSTROMS REMARK 525 HOH A 483 DISTANCE = 5.29 ANGSTROMS REMARK 525 HOH A 491 DISTANCE = 5.01 ANGSTROMS REMARK 525 HOH A 518 DISTANCE = 5.57 ANGSTROMS REMARK 525 HOH A 533 DISTANCE = 5.51 ANGSTROMS REMARK 525 HOH A 538 DISTANCE = 6.77 ANGSTROMS REMARK 525 HOH A 704 DISTANCE = 5.17 ANGSTROMS REMARK 525 HOH B 375 DISTANCE = 5.04 ANGSTROMS REMARK 525 HOH B 427 DISTANCE = 5.16 ANGSTROMS REMARK 525 HOH B 452 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH B 468 DISTANCE = 5.77 ANGSTROMS REMARK 525 HOH B 473 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH B 515 DISTANCE = 5.07 ANGSTROMS REMARK 525 HOH B 525 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH B 526 DISTANCE = 7.63 ANGSTROMS REMARK 525 HOH B 529 DISTANCE = 6.56 ANGSTROMS REMARK 525 HOH B 532 DISTANCE = 7.35 ANGSTROMS REMARK 525 HOH B 545 DISTANCE = 5.03 ANGSTROMS REMARK 525 HOH B 546 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH B 549 DISTANCE = 6.91 ANGSTROMS REMARK 525 HOH B 560 DISTANCE = 7.10 ANGSTROMS REMARK 525 HOH B 561 DISTANCE = 5.39 ANGSTROMS REMARK 525 HOH B 589 DISTANCE = 5.01 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 249 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 197 O REMARK 620 2 HOH A 554 O 78.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 250 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 101 O REMARK 620 2 HOH B 381 O 87.7 REMARK 620 3 HOH B 259 O 60.8 143.0 REMARK 620 4 HOH B 491 O 87.8 71.0 122.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 249 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B 197 O REMARK 620 2 HOH A 251 O 137.8 REMARK 620 3 HOH B 255 O 83.3 67.1 REMARK 620 4 HOH B 257 O 92.4 108.8 77.6 REMARK 620 5 HOH A 250 O 99.4 90.2 145.6 136.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 249 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 249 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 250 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP01074 RELATED DB: TARGETDB DBREF 3FPK A 1 248 UNP Q8ZKP5 Q8ZKP5_SALTY 1 248 DBREF 3FPK B 1 248 UNP Q8ZKP5 Q8ZKP5_SALTY 1 248 SEQADV 3FPK SER A -2 UNP Q8ZKP5 EXPRESSION TAG SEQADV 3FPK ASN A -1 UNP Q8ZKP5 EXPRESSION TAG SEQADV 3FPK ALA A 0 UNP Q8ZKP5 EXPRESSION TAG SEQADV 3FPK SER B -2 UNP Q8ZKP5 EXPRESSION TAG SEQADV 3FPK ASN B -1 UNP Q8ZKP5 EXPRESSION TAG SEQADV 3FPK ALA B 0 UNP Q8ZKP5 EXPRESSION TAG SEQRES 1 A 251 SER ASN ALA MET ALA ASP TRP VAL THR GLY LYS VAL THR SEQRES 2 A 251 LYS VAL GLN ASN TRP THR ASP ALA LEU PHE SER LEU THR SEQRES 3 A 251 VAL HIS ALA PRO ILE ASN PRO PHE THR ALA GLY GLN PHE SEQRES 4 A 251 THR LYS LEU GLY LEU GLU ILE ASP GLY GLU ARG VAL GLN SEQRES 5 A 251 ARG ALA TYR SER TYR VAL ASN ALA PRO ASP ASN PRO ASN SEQRES 6 A 251 LEU GLU PHE TYR LEU VAL THR VAL PRO GLN GLY LYS LEU SEQRES 7 A 251 SER PRO ARG LEU ALA ALA LEU LYS PRO GLY ASP GLU VAL SEQRES 8 A 251 GLN VAL VAL SER ASP ALA SER GLY PHE PHE VAL LEU ASP SEQRES 9 A 251 GLU VAL PRO ASP CYS GLU THR LEU TRP MET LEU ALA THR SEQRES 10 A 251 GLY THR ALA ILE GLY PRO TYR LEU SER ILE LEU GLN TYR SEQRES 11 A 251 GLY GLN ASP VAL ALA ARG PHE LYS ASN LEU VAL LEU VAL SEQRES 12 A 251 HIS ALA ALA ARG PHE ALA ALA ASP LEU SER TYR LEU PRO SEQRES 13 A 251 LEU MET LEU GLU LEU GLN GLN ARG TYR GLU GLY LYS LEU SEQRES 14 A 251 ARG ILE GLN THR VAL VAL SER ARG GLU ASN VAL PRO GLY SEQRES 15 A 251 SER LEU THR GLY ARG VAL PRO ALA LEU ILE GLU ASN GLY SEQRES 16 A 251 GLU LEU GLU LYS ALA VAL GLY LEU PRO MET ASP LYS GLU SEQRES 17 A 251 THR SER HIS VAL MET LEU CYS GLY ASN PRO GLN MET VAL SEQRES 18 A 251 ARG ASP THR GLN GLN LEU LEU LYS GLU THR ARG GLN MET SEQRES 19 A 251 THR LYS HIS LEU ARG ARG ARG PRO GLY HIS MET THR ALA SEQRES 20 A 251 GLU HIS TYR TRP SEQRES 1 B 251 SER ASN ALA MET ALA ASP TRP VAL THR GLY LYS VAL THR SEQRES 2 B 251 LYS VAL GLN ASN TRP THR ASP ALA LEU PHE SER LEU THR SEQRES 3 B 251 VAL HIS ALA PRO ILE ASN PRO PHE THR ALA GLY GLN PHE SEQRES 4 B 251 THR LYS LEU GLY LEU GLU ILE ASP GLY GLU ARG VAL GLN SEQRES 5 B 251 ARG ALA TYR SER TYR VAL ASN ALA PRO ASP ASN PRO ASN SEQRES 6 B 251 LEU GLU PHE TYR LEU VAL THR VAL PRO GLN GLY LYS LEU SEQRES 7 B 251 SER PRO ARG LEU ALA ALA LEU LYS PRO GLY ASP GLU VAL SEQRES 8 B 251 GLN VAL VAL SER ASP ALA SER GLY PHE PHE VAL LEU ASP SEQRES 9 B 251 GLU VAL PRO ASP CYS GLU THR LEU TRP MET LEU ALA THR SEQRES 10 B 251 GLY THR ALA ILE GLY PRO TYR LEU SER ILE LEU GLN TYR SEQRES 11 B 251 GLY GLN ASP VAL ALA ARG PHE LYS ASN LEU VAL LEU VAL SEQRES 12 B 251 HIS ALA ALA ARG PHE ALA ALA ASP LEU SER TYR LEU PRO SEQRES 13 B 251 LEU MET LEU GLU LEU GLN GLN ARG TYR GLU GLY LYS LEU SEQRES 14 B 251 ARG ILE GLN THR VAL VAL SER ARG GLU ASN VAL PRO GLY SEQRES 15 B 251 SER LEU THR GLY ARG VAL PRO ALA LEU ILE GLU ASN GLY SEQRES 16 B 251 GLU LEU GLU LYS ALA VAL GLY LEU PRO MET ASP LYS GLU SEQRES 17 B 251 THR SER HIS VAL MET LEU CYS GLY ASN PRO GLN MET VAL SEQRES 18 B 251 ARG ASP THR GLN GLN LEU LEU LYS GLU THR ARG GLN MET SEQRES 19 B 251 THR LYS HIS LEU ARG ARG ARG PRO GLY HIS MET THR ALA SEQRES 20 B 251 GLU HIS TYR TRP HET FAD A 301 53 HET MG A 249 1 HET FAD B 301 53 HET MG B 249 1 HET CA B 250 1 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM MG MAGNESIUM ION HETNAM CA CALCIUM ION FORMUL 3 FAD 2(C27 H33 N9 O15 P2) FORMUL 4 MG 2(MG 2+) FORMUL 7 CA CA 2+ FORMUL 8 HOH *711(H2 O) HELIX 1 1 LEU A 75 ALA A 81 1 7 HELIX 2 2 VAL A 99 VAL A 103 5 5 HELIX 3 3 ILE A 118 GLY A 128 1 11 HELIX 4 4 PHE A 145 LEU A 149 5 5 HELIX 5 5 TYR A 151 GLU A 163 1 13 HELIX 6 6 ARG A 184 ASN A 191 1 8 HELIX 7 7 GLY A 192 GLY A 199 1 8 HELIX 8 8 ASN A 214 GLN A 230 1 17 HELIX 9 9 LEU B 75 ALA B 81 1 7 HELIX 10 10 VAL B 99 VAL B 103 5 5 HELIX 11 11 ILE B 118 GLY B 128 1 11 HELIX 12 12 PHE B 145 LEU B 149 5 5 HELIX 13 13 TYR B 151 TYR B 162 1 12 HELIX 14 14 ARG B 184 ASN B 191 1 8 HELIX 15 15 GLY B 192 GLY B 199 1 8 HELIX 16 16 ASN B 214 GLN B 230 1 17 SHEET 1 A 6 GLU A 46 SER A 53 0 SHEET 2 A 6 PHE A 36 ILE A 43 -1 N ILE A 43 O GLU A 46 SHEET 3 A 6 GLU A 87 VAL A 91 -1 O GLN A 89 N GLY A 40 SHEET 4 A 6 TRP A 4 ASN A 14 -1 N GLY A 7 O VAL A 88 SHEET 5 A 6 LEU A 19 HIS A 25 -1 O THR A 23 N THR A 10 SHEET 6 A 6 LEU A 63 VAL A 68 -1 O LEU A 67 N PHE A 20 SHEET 1 B 6 LEU A 181 THR A 182 0 SHEET 2 B 6 LEU A 166 VAL A 172 1 N VAL A 172 O LEU A 181 SHEET 3 B 6 ASN A 136 ALA A 143 1 N LEU A 139 O ARG A 167 SHEET 4 B 6 THR A 108 THR A 114 1 N MET A 111 O VAL A 140 SHEET 5 B 6 SER A 207 GLY A 213 1 O MET A 210 N TRP A 110 SHEET 6 B 6 MET A 242 HIS A 246 1 O GLU A 245 N LEU A 211 SHEET 1 C 6 GLU B 46 SER B 53 0 SHEET 2 C 6 PHE B 36 ILE B 43 -1 N ILE B 43 O GLU B 46 SHEET 3 C 6 GLU B 87 VAL B 91 -1 O GLN B 89 N GLY B 40 SHEET 4 C 6 TRP B 4 ASN B 14 -1 N GLY B 7 O VAL B 88 SHEET 5 C 6 LEU B 19 HIS B 25 -1 O THR B 23 N LYS B 11 SHEET 6 C 6 LEU B 63 VAL B 68 -1 O LEU B 67 N PHE B 20 SHEET 1 D 6 LEU B 181 THR B 182 0 SHEET 2 D 6 LEU B 166 VAL B 172 1 N VAL B 172 O LEU B 181 SHEET 3 D 6 ASN B 136 ALA B 143 1 N LEU B 139 O GLN B 169 SHEET 4 D 6 THR B 108 THR B 114 1 N MET B 111 O VAL B 140 SHEET 5 D 6 SER B 207 GLY B 213 1 O MET B 210 N TRP B 110 SHEET 6 D 6 MET B 242 HIS B 246 1 O THR B 243 N VAL B 209 LINK O ALA A 197 MG MG A 249 1555 1555 2.32 LINK O AASP B 101 CA CA B 250 1555 1555 2.50 LINK O BASP B 101 CA CA B 250 1555 1555 2.40 LINK O ALA B 197 MG MG B 249 1555 1555 2.28 LINK MG MG A 249 O HOH A 554 1555 1555 2.12 LINK MG MG B 249 O HOH A 251 1555 1555 2.49 LINK MG MG B 249 O HOH B 255 1555 1555 2.33 LINK MG MG B 249 O HOH B 257 1555 1555 2.05 LINK MG MG B 249 O HOH A 250 1555 1555 2.15 LINK CA CA B 250 O HOH B 381 1555 1555 2.46 LINK CA CA B 250 O HOH B 259 1555 1555 2.38 LINK CA CA B 250 O HOH B 491 1555 1555 2.93 SITE 1 AC1 26 PHE A 36 ARG A 50 ALA A 51 TYR A 52 SITE 2 AC1 26 SER A 53 TYR A 66 LEU A 67 VAL A 68 SITE 3 AC1 26 VAL A 70 GLY A 73 LYS A 74 LEU A 75 SITE 4 AC1 26 SER A 76 THR A 116 HIS A 246 TYR A 247 SITE 5 AC1 26 TRP A 248 HOH A 271 HOH A 422 HOH A 452 SITE 6 AC1 26 HOH A 480 HOH A 601 HOH A 607 HOH A 609 SITE 7 AC1 26 HOH A 643 HOH A 654 SITE 1 AC2 4 ALA A 197 HOH A 493 HOH A 554 HOH B 692 SITE 1 AC3 27 HOH A 555 PHE B 36 ARG B 50 ALA B 51 SITE 2 AC3 27 TYR B 52 SER B 53 TYR B 66 LEU B 67 SITE 3 AC3 27 VAL B 68 VAL B 70 GLY B 73 LYS B 74 SITE 4 AC3 27 LEU B 75 SER B 76 THR B 116 TYR B 247 SITE 5 AC3 27 TRP B 248 HOH B 274 HOH B 318 HOH B 331 SITE 6 AC3 27 HOH B 340 HOH B 342 HOH B 373 HOH B 399 SITE 7 AC3 27 HOH B 423 HOH B 438 HOH B 651 SITE 1 AC4 7 HOH A 250 HOH A 251 HOH A 690 ALA B 197 SITE 2 AC4 7 HOH B 255 HOH B 257 HOH B 258 SITE 1 AC5 5 HOH A 261 ASP B 101 HOH B 259 HOH B 381 SITE 2 AC5 5 HOH B 491 CRYST1 69.423 69.989 109.630 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014404 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014288 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009122 0.00000 MASTER 414 0 5 16 24 0 19 6 0 0 0 40 END