HEADER UNKNOWN FUNCTION 12-NOV-08 3F8H TITLE CRYSTAL STRUCTURE OF A PUTATIVE POLYKETIDE CYCLASE (TM1040_3560) FROM TITLE 2 SILICIBACTER SP. TM1040 AT 2.00 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE POLYKETIDE CYCLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SILICIBACTER SP. TM1040; SOURCE 3 ORGANISM_TAXID: 292414; SOURCE 4 GENE: TM1040_3560, YP_611791.1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI-2, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 24-JUL-19 3F8H 1 REMARK LINK REVDAT 5 01-NOV-17 3F8H 1 REMARK REVDAT 4 13-JUL-11 3F8H 1 VERSN REVDAT 3 23-MAR-11 3F8H 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 3F8H 1 VERSN REVDAT 1 25-NOV-08 3F8H 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE POLYKETIDE CYCLASE JRNL TITL 2 (YP_611791.1) FROM SILICIBACTER SP. TM1040 AT 2.00 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0067 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 28016 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1408 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1950 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.56 REMARK 3 BIN R VALUE (WORKING SET) : 0.2070 REMARK 3 BIN FREE R VALUE SET COUNT : 84 REMARK 3 BIN FREE R VALUE : 0.2250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2136 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 65 REMARK 3 SOLVENT ATOMS : 270 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 23.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.73000 REMARK 3 B22 (A**2) : 0.73000 REMARK 3 B33 (A**2) : -1.45000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.132 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.133 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.086 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.825 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2283 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1473 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3109 ; 1.679 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3569 ; 1.582 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 286 ; 3.965 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 115 ;30.722 ;24.087 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 346 ;10.753 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;17.279 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 342 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2584 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 495 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1382 ; 1.350 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 565 ; 0.288 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2206 ; 2.462 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 901 ; 4.331 ; 6.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 896 ; 6.105 ; 8.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 3 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 3 A 31 6 REMARK 3 1 B 3 B 31 6 REMARK 3 2 A 37 A 64 6 REMARK 3 2 B 37 B 64 6 REMARK 3 3 A 71 A 130 6 REMARK 3 3 B 71 B 130 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -5 A 131 REMARK 3 ORIGIN FOR THE GROUP (A): 9.0900 29.1850 22.3570 REMARK 3 T TENSOR REMARK 3 T11: -0.2224 T22: -0.2067 REMARK 3 T33: -0.1757 T12: -0.0113 REMARK 3 T13: 0.0068 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 0.5031 L22: 0.6027 REMARK 3 L33: 2.0821 L12: 0.2396 REMARK 3 L13: -0.1316 L23: -0.2851 REMARK 3 S TENSOR REMARK 3 S11: 0.0123 S12: 0.0155 S13: 0.0616 REMARK 3 S21: 0.0108 S22: 0.0221 S23: -0.0578 REMARK 3 S31: -0.2517 S32: 0.0070 S33: -0.0345 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -5 B 131 REMARK 3 ORIGIN FOR THE GROUP (A): 2.5430 22.7340 41.8930 REMARK 3 T TENSOR REMARK 3 T11: -0.2468 T22: -0.2139 REMARK 3 T33: -0.1974 T12: 0.0092 REMARK 3 T13: -0.0008 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 0.9160 L22: 0.6930 REMARK 3 L33: 1.8565 L12: 0.1125 REMARK 3 L13: -0.7435 L23: 0.2147 REMARK 3 S TENSOR REMARK 3 S11: -0.0277 S12: -0.0260 S13: -0.0052 REMARK 3 S21: 0.0497 S22: 0.0399 S23: 0.0193 REMARK 3 S31: -0.0719 S32: 0.0312 S33: -0.0122 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS REMARK 3 ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE REMARK 3 ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED REMARK 3 SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. CA ION, REMARK 3 2-METHYLPENTANE-2,4-DIOL AND ACETATE IONS HAVE BEEN MODELED FROM REMARK 3 THE CRYSTALLIZATION CONDITIONS. REMARK 4 REMARK 4 3F8H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-NOV-08. REMARK 100 THE DEPOSITION ID IS D_1000050278. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97967,0.94645 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMETER REMARK 200 OPTICS : ADJUSTABLE FOCUSING MIRRORS IN K REMARK 200 -B GEOMETRY REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28101 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 29.501 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.16900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.5800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.01000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.0200M CACL2, 30.0000% MPD, 0.1M REMARK 280 ACETATE PH 4.6, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 98.04500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 31.65500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 31.65500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 147.06750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 31.65500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 31.65500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 49.02250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 31.65500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.65500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 147.06750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 31.65500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.65500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 49.02250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 98.04500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT CRYSTAL PACKING ANALYSIS SUGGESTS THE REMARK 300 ASSIGNMENT OF A DIMER AS THE SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -18 REMARK 465 GLY A -17 REMARK 465 SER A -16 REMARK 465 ASP A -15 REMARK 465 LYS A -14 REMARK 465 ILE A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 GLU A -6 REMARK 465 MSE B -18 REMARK 465 GLY B -17 REMARK 465 SER B -16 REMARK 465 ASP B -15 REMARK 465 LYS B -14 REMARK 465 ILE B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 GLU B -6 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 88 CG CD OE1 OE2 REMARK 470 LYS A 127 CD CE NZ REMARK 470 LYS B 56 CE NZ REMARK 470 GLU B 88 CG CD OE1 OE2 REMARK 470 ALA B 131 C O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 3 53.00 -100.62 REMARK 500 GLU A 88 115.47 -38.35 REMARK 500 ARG A 94 26.59 -143.94 REMARK 500 GLU B 34 19.83 59.06 REMARK 500 ARG B 94 35.83 -147.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 132 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 16 OD1 REMARK 620 2 ASP A 18 OD2 97.3 REMARK 620 3 HOH A 201 O 89.2 77.3 REMARK 620 4 HOH A 203 O 93.2 146.9 71.6 REMARK 620 5 HOH A 187 O 90.8 144.8 137.3 65.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 132 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 133 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 134 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 135 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 136 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD B 132 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD B 133 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD B 134 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD B 135 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 136 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 391384 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. DBREF 3F8H A 1 131 UNP Q1GLD7 Q1GLD7_SILST 1 131 DBREF 3F8H B 1 131 UNP Q1GLD7 Q1GLD7_SILST 1 131 SEQADV 3F8H MSE A -18 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H GLY A -17 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H SER A -16 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H ASP A -15 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H LYS A -14 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H ILE A -13 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H HIS A -12 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H HIS A -11 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H HIS A -10 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H HIS A -9 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H HIS A -8 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H HIS A -7 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H GLU A -6 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H ASN A -5 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H LEU A -4 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H TYR A -3 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H PHE A -2 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H GLN A -1 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H GLY A 0 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H MSE B -18 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H GLY B -17 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H SER B -16 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H ASP B -15 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H LYS B -14 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H ILE B -13 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H HIS B -12 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H HIS B -11 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H HIS B -10 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H HIS B -9 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H HIS B -8 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H HIS B -7 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H GLU B -6 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H ASN B -5 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H LEU B -4 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H TYR B -3 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H PHE B -2 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H GLN B -1 UNP Q1GLD7 LEADER SEQUENCE SEQADV 3F8H GLY B 0 UNP Q1GLD7 LEADER SEQUENCE SEQRES 1 A 150 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 A 150 ASN LEU TYR PHE GLN GLY MSE ASN ASP THR ILE ALA ARG SEQRES 3 A 150 TYR PHE ASP ALA PHE ASN ALA GLY ASP THR ASP GLY MSE SEQRES 4 A 150 LEU ALA CYS LEU SER GLU ASP VAL ALA HIS HIS VAL ASN SEQRES 5 A 150 GLU GLY ASN ILE ARG VAL GLY LYS GLU LYS PHE ALA ALA SEQRES 6 A 150 PHE CYS ALA HIS MSE SER HIS CYS TYR LYS GLU GLU LEU SEQRES 7 A 150 THR ASP MSE VAL ILE PHE ALA THR PRO ASP ALA THR ARG SEQRES 8 A 150 ALA ALA ALA GLU TYR THR VAL ASN GLY THR TYR LEU ALA SEQRES 9 A 150 THR ASP GLU GLY LEU PRO GLU ALA ARG GLN GLN SER TYR SEQRES 10 A 150 LYS LEU PRO ALA GLY SER PHE PHE ASP LEU ARG ASP GLY SEQRES 11 A 150 LEU ILE THR ARG VAL THR THR TYR TYR ASN LEU SER ASP SEQRES 12 A 150 TRP ILE LYS GLN VAL SER ALA SEQRES 1 B 150 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 B 150 ASN LEU TYR PHE GLN GLY MSE ASN ASP THR ILE ALA ARG SEQRES 3 B 150 TYR PHE ASP ALA PHE ASN ALA GLY ASP THR ASP GLY MSE SEQRES 4 B 150 LEU ALA CYS LEU SER GLU ASP VAL ALA HIS HIS VAL ASN SEQRES 5 B 150 GLU GLY ASN ILE ARG VAL GLY LYS GLU LYS PHE ALA ALA SEQRES 6 B 150 PHE CYS ALA HIS MSE SER HIS CYS TYR LYS GLU GLU LEU SEQRES 7 B 150 THR ASP MSE VAL ILE PHE ALA THR PRO ASP ALA THR ARG SEQRES 8 B 150 ALA ALA ALA GLU TYR THR VAL ASN GLY THR TYR LEU ALA SEQRES 9 B 150 THR ASP GLU GLY LEU PRO GLU ALA ARG GLN GLN SER TYR SEQRES 10 B 150 LYS LEU PRO ALA GLY SER PHE PHE ASP LEU ARG ASP GLY SEQRES 11 B 150 LEU ILE THR ARG VAL THR THR TYR TYR ASN LEU SER ASP SEQRES 12 B 150 TRP ILE LYS GLN VAL SER ALA MODRES 3F8H MSE A 1 MET SELENOMETHIONINE MODRES 3F8H MSE A 20 MET SELENOMETHIONINE MODRES 3F8H MSE A 51 MET SELENOMETHIONINE MODRES 3F8H MSE A 62 MET SELENOMETHIONINE MODRES 3F8H MSE B 1 MET SELENOMETHIONINE MODRES 3F8H MSE B 20 MET SELENOMETHIONINE MODRES 3F8H MSE B 51 MET SELENOMETHIONINE MODRES 3F8H MSE B 62 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 20 8 HET MSE A 51 8 HET MSE A 62 8 HET MSE B 1 8 HET MSE B 20 8 HET MSE B 51 13 HET MSE B 62 8 HET CA A 132 1 HET MPD A 133 8 HET MRD A 134 8 HET MRD A 135 8 HET ACT A 136 4 HET MRD B 132 8 HET MRD B 133 8 HET MRD B 134 8 HET MRD B 135 8 HET ACT B 136 4 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL HETNAM ACT ACETATE ION FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 CA CA 2+ FORMUL 4 MPD C6 H14 O2 FORMUL 5 MRD 6(C6 H14 O2) FORMUL 7 ACT 2(C2 H3 O2 1-) FORMUL 13 HOH *270(H2 O) HELIX 1 1 ASP A 3 GLY A 15 1 13 HELIX 2 2 ASP A 16 ALA A 22 1 7 HELIX 3 3 GLY A 40 CYS A 54 1 15 HELIX 4 4 ASN A 121 ALA A 131 1 11 HELIX 5 5 MSE B 1 GLY B 15 1 15 HELIX 6 6 ASP B 16 CYS B 23 1 8 HELIX 7 7 GLY B 40 CYS B 54 1 15 HELIX 8 8 ASN B 121 SER B 130 1 10 SHEET 1 A 2 PHE A -2 GLN A -1 0 SHEET 2 A 2 LEU B -4 TYR B -3 -1 O TYR B -3 N PHE A -2 SHEET 1 B 6 ASN A 36 VAL A 39 0 SHEET 2 B 6 LEU A 24 ASN A 33 -1 N HIS A 30 O ARG A 38 SHEET 3 B 6 LEU A 112 TYR A 120 1 O ILE A 113 N SER A 25 SHEET 4 B 6 GLN A 96 ARG A 109 -1 N GLY A 103 O TYR A 119 SHEET 5 B 6 ARG A 72 TYR A 83 -1 N VAL A 79 O LEU A 100 SHEET 6 B 6 TYR A 55 ALA A 66 -1 N PHE A 65 O ALA A 74 SHEET 1 C 6 ILE B 37 VAL B 39 0 SHEET 2 C 6 LEU B 24 HIS B 31 -1 N HIS B 30 O ARG B 38 SHEET 3 C 6 LEU B 112 TYR B 120 1 O VAL B 116 N HIS B 31 SHEET 4 C 6 SER B 97 ARG B 109 -1 N GLY B 103 O TYR B 119 SHEET 5 C 6 ARG B 72 TYR B 83 -1 N VAL B 79 O LEU B 100 SHEET 6 C 6 TYR B 55 ILE B 64 -1 N VAL B 63 O GLU B 76 LINK C GLY A 0 N MSE A 1 1555 1555 1.32 LINK C MSE A 1 N ASN A 2 1555 1555 1.33 LINK C GLY A 19 N MSE A 20 1555 1555 1.33 LINK C MSE A 20 N LEU A 21 1555 1555 1.33 LINK C HIS A 50 N MSE A 51 1555 1555 1.32 LINK C MSE A 51 N SER A 52 1555 1555 1.32 LINK C ASP A 61 N MSE A 62 1555 1555 1.31 LINK C MSE A 62 N VAL A 63 1555 1555 1.33 LINK C GLY B 0 N MSE B 1 1555 1555 1.32 LINK C MSE B 1 N ASN B 2 1555 1555 1.32 LINK C GLY B 19 N MSE B 20 1555 1555 1.33 LINK C MSE B 20 N LEU B 21 1555 1555 1.32 LINK C HIS B 50 N MSE B 51 1555 1555 1.31 LINK C MSE B 51 N SER B 52 1555 1555 1.32 LINK C ASP B 61 N MSE B 62 1555 1555 1.32 LINK C MSE B 62 N VAL B 63 1555 1555 1.31 LINK OD1 ASP A 16 CA CA A 132 1555 1555 2.31 LINK OD2 ASP A 18 CA CA A 132 1555 1555 2.40 LINK CA CA A 132 O HOH A 201 1555 1555 2.32 LINK CA CA A 132 O HOH A 203 1555 1555 2.35 LINK CA CA A 132 O HOH A 187 1555 1555 2.30 SITE 1 AC1 7 ASP A 16 ASP A 18 HOH A 187 HOH A 201 SITE 2 AC1 7 HOH A 203 ASP B 16 ASP B 18 SITE 1 AC2 7 TYR A 8 LEU A 59 TYR A 77 SER A 104 SITE 2 AC2 7 THR A 118 MRD A 134 HOH A 223 SITE 1 AC3 6 MSE A 51 TYR A 55 GLU A 57 TYR A 98 SITE 2 AC3 6 TRP A 125 MPD A 133 SITE 1 AC4 8 PHE A 12 CYS A 48 MSE A 51 TYR A 55 SITE 2 AC4 8 LYS A 56 GLU A 57 HOH A 209 HOH A 263 SITE 1 AC5 4 THR A 118 TYR A 119 TYR A 120 HOH A 258 SITE 1 AC6 6 MSE B 51 TYR B 55 GLU B 57 TYR B 98 SITE 2 AC6 6 TYR B 120 TRP B 125 SITE 1 AC7 5 TYR B 8 PHE B 12 LEU B 59 TYR B 77 SITE 2 AC7 5 THR B 118 SITE 1 AC8 8 PHE B 12 GLY B 15 CYS B 48 MSE B 51 SITE 2 AC8 8 TYR B 55 GLU B 57 HOH B 146 HOH B 225 SITE 1 AC9 5 GLU A 42 ARG B 38 PHE B 47 HIS B 50 SITE 2 AC9 5 HOH B 263 SITE 1 BC1 4 HIS B 30 VAL B 32 ASN B 33 HOH B 176 CRYST1 63.310 63.310 196.090 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015795 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015795 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005100 0.00000 MASTER 443 0 18 8 14 0 18 6 0 0 0 24 END