HEADER NUCLEIC ACID BINDING PROTEIN/DNA/RNA 07-NOV-08 3F73 TITLE ALIGNMENT OF GUIDE-TARGET SEED DUPLEX WITHIN AN ARGONAUTE SILENCING TITLE 2 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGONAUTE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'- COMPND 7 D(P*DTP*DGP*DAP*DGP*DGP*DTP*DAP*DGP*DTP*DAP*DGP*DGP*DTP*DTP*DGP*DTP*D COMPND 8 A*DTP*DAP*DGP*DT)-3'); COMPND 9 CHAIN: C, X; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: RNA (5'- COMPND 13 R(*UP*AP*UP*AP*CP*AP*A*CP*UP*CP*AP*CP*UP*AP*CP*CP*UP*CP*GP*U)-3'); COMPND 14 CHAIN: H, Y; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 262724; SOURCE 4 STRAIN: HB27; SOURCE 5 GENE: TT_P0026; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES KEYWDS ARGONAUTE, PROTEIN-DNA-RNA-COMPLEX, NUCLEIC ACID BINDING PROTEIN-DNA- KEYWDS 2 RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.WANG,H.LI,G.SHENG,S.JURANEK,T.TUSCHL,D.J.PATEL REVDAT 3 13-JUL-11 3F73 1 VERSN REVDAT 2 10-MAR-09 3F73 1 JRNL REVDAT 1 16-DEC-08 3F73 0 JRNL AUTH Y.WANG,S.JURANEK,H.LI,G.SHENG,T.TUSCHL,D.J.PATEL JRNL TITL STRUCTURE OF AN ARGONAUTE SILENCING COMPLEX WITH A JRNL TITL 2 SEED-CONTAINING GUIDE DNA AND TARGET RNA DUPLEX. JRNL REF NATURE V. 456 921 2008 JRNL REFN ISSN 0028-0836 JRNL PMID 19092929 JRNL DOI 10.1038/NATURE07666 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 29792 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2073 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.19 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3170 REMARK 3 BIN FREE R VALUE : 0.3670 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 329 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10044 REMARK 3 NUCLEIC ACID ATOMS : 980 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 16 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.51700 REMARK 3 B22 (A**2) : 12.79300 REMARK 3 B33 (A**2) : -5.27600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.27200 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ANISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 36.88 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR:PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR:DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : CNS_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 4 : CNS_TOPPAR:WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 PARAMETER FILE 7 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 TOPOLOGY FILE 7 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3F73 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-NOV-08. REMARK 100 THE RCSB ID CODE IS RCSB050228. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29830 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08100 REMARK 200 FOR THE DATA SET : 15.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.39000 REMARK 200 R SYM FOR SHELL (I) : 0.39700 REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: PDB ENTRY 3DLH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% (V/V) PEG400, 50MM MES 5.6, 0.1M REMARK 280 KCL, 15 MM MGCL2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 308K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 60.26350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, X, Y REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 HIS A 3 REMARK 465 LEU A 4 REMARK 465 ASP A 497 REMARK 465 ASP A 609 REMARK 465 PHE A 610 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 HIS B 3 REMARK 465 GLU B 272 REMARK 465 GLU B 273 REMARK 465 GLU B 274 REMARK 465 ALA B 468 REMARK 465 ASP B 497 REMARK 465 GLY B 498 REMARK 465 GLY B 511 REMARK 465 GLU B 512 REMARK 465 ARG B 513 REMARK 465 LYS B 533 REMARK 465 ASP B 609 REMARK 465 PHE B 610 REMARK 465 DT C 13 REMARK 465 DT C 14 REMARK 465 DG C 15 REMARK 465 DT C 16 REMARK 465 DA C 17 REMARK 465 U H 1 REMARK 465 A H 2 REMARK 465 U H 3 REMARK 465 A H 4 REMARK 465 C H 5 REMARK 465 A H 6 REMARK 465 A H 7 REMARK 465 U H 20 REMARK 465 DG X 11 REMARK 465 DG X 12 REMARK 465 DT X 13 REMARK 465 DT X 14 REMARK 465 DG X 15 REMARK 465 DT X 16 REMARK 465 U Y 1 REMARK 465 A Y 2 REMARK 465 U Y 3 REMARK 465 A Y 4 REMARK 465 C Y 5 REMARK 465 A Y 6 REMARK 465 A Y 7 REMARK 465 C Y 8 REMARK 465 U Y 20 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 22 CG CD OE1 OE2 REMARK 470 LEU A 24 CG CD1 CD2 REMARK 470 ARG A 39 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 40 CG CD OE1 OE2 REMARK 470 GLU A 41 CG CD OE1 OE2 REMARK 470 ARG A 81 CG CD NE CZ NH1 NH2 REMARK 470 MET A 82 CG SD CE REMARK 470 GLN A 84 CG CD OE1 NE2 REMARK 470 THR A 85 OG1 CG2 REMARK 470 ARG A 96 CG CD NE CZ NH1 NH2 REMARK 470 PRO A 97 CG CD REMARK 470 ASP A 99 CG OD1 OD2 REMARK 470 GLU A 105 CG CD OE1 OE2 REMARK 470 ARG A 106 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 108 CG1 CG2 REMARK 470 GLU A 119 CG CD OE1 OE2 REMARK 470 GLU A 125 CG CD OE1 OE2 REMARK 470 ARG A 137 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 159 CG OD1 OD2 REMARK 470 LEU A 217 CG CD1 CD2 REMARK 470 SER A 229 OG REMARK 470 GLU A 237 CG CD OE1 OE2 REMARK 470 LYS A 248 CG CD CE NZ REMARK 470 ASP A 249 CG OD1 OD2 REMARK 470 ARG A 251 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 269 CG OD1 OD2 REMARK 470 HIS A 271 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 272 CG CD OE1 OE2 REMARK 470 GLU A 273 CG CD OE1 OE2 REMARK 470 GLU A 274 CG CD OE1 OE2 REMARK 470 LEU A 277 CG CD1 CD2 REMARK 470 LEU A 279 CG CD1 CD2 REMARK 470 GLU A 285 CG CD OE1 OE2 REMARK 470 GLN A 355 CG CD OE1 NE2 REMARK 470 GLU A 359 CG CD OE1 OE2 REMARK 470 ARG A 363 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 367 CG CD NE CZ NH1 NH2 REMARK 470 SER A 372 OG REMARK 470 HIS A 382 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 387 CG CD OE1 NE2 REMARK 470 LEU A 389 CG CD1 CD2 REMARK 470 GLU A 393 CG CD OE1 OE2 REMARK 470 LYS A 397 CG CD CE NZ REMARK 470 LYS A 399 CG CD CE NZ REMARK 470 GLU A 401 CG CD OE1 OE2 REMARK 470 GLU A 416 CG CD OE1 OE2 REMARK 470 ASP A 417 CG OD1 OD2 REMARK 470 ARG A 420 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 427 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 428 CG CD OE1 OE2 REMARK 470 ARG A 440 CG CD NE CZ NH1 NH2 REMARK 470 SER A 466 OG REMARK 470 ARG A 482 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 483 CG CD OE1 OE2 REMARK 470 PRO A 506 CG CD REMARK 470 GLN A 509 CG CD OE1 NE2 REMARK 470 GLU A 564 CG CD OE1 OE2 REMARK 470 SER A 576 OG REMARK 470 GLN A 585 CG CD OE1 NE2 REMARK 470 ARG A 587 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 598 CG OD1 OD2 REMARK 470 LYS A 599 CG CD CE NZ REMARK 470 ARG A 608 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 611 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 664 CG CD CE NZ REMARK 470 VAL A 666 CG1 CG2 REMARK 470 ARG A 672 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 673 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 675 CG CD CE NZ REMARK 470 GLU A 676 CG CD OE1 OE2 REMARK 470 LYS A 681 CG CD CE NZ REMARK 470 LEU B 4 CG CD1 CD2 REMARK 470 ARG B 28 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 39 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 40 CG CD OE1 OE2 REMARK 470 ARG B 51 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 93 CG CD CE NZ REMARK 470 ARG B 96 CG CD NE CZ NH1 NH2 REMARK 470 PRO B 97 CG CD REMARK 470 VAL B 108 CG1 CG2 REMARK 470 GLU B 125 CG CD OE1 OE2 REMARK 470 SER B 229 OG REMARK 470 GLU B 237 CG CD OE1 OE2 REMARK 470 LYS B 248 CG CD CE NZ REMARK 470 ASP B 249 CG OD1 OD2 REMARK 470 ARG B 251 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 269 CG OD1 OD2 REMARK 470 HIS B 271 CG ND1 CD2 CE1 NE2 REMARK 470 SER B 276 OG REMARK 470 LEU B 277 CG CD1 CD2 REMARK 470 LEU B 279 CG CD1 CD2 REMARK 470 ARG B 288 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 292 CG CD OE1 OE2 REMARK 470 ARG B 324 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 325 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 340 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 355 CG CD OE1 NE2 REMARK 470 GLU B 359 CG CD OE1 OE2 REMARK 470 SER B 375 OG REMARK 470 HIS B 382 CG ND1 CD2 CE1 NE2 REMARK 470 HIS B 384 CG ND1 CD2 CE1 NE2 REMARK 470 PRO B 385 CG CD REMARK 470 SER B 386 OG REMARK 470 GLN B 387 CG CD OE1 NE2 REMARK 470 LEU B 389 CG CD1 CD2 REMARK 470 ARG B 392 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 393 CG CD OE1 OE2 REMARK 470 ARG B 396 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 397 CG CD CE NZ REMARK 470 LYS B 399 CG CD CE NZ REMARK 470 GLU B 400 CG CD OE1 OE2 REMARK 470 GLU B 401 CG CD OE1 OE2 REMARK 470 GLU B 416 CG CD OE1 OE2 REMARK 470 ASP B 417 CG OD1 OD2 REMARK 470 ARG B 427 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 428 CG CD OE1 OE2 REMARK 470 SER B 466 OG REMARK 470 GLU B 472 CG CD OE1 OE2 REMARK 470 ARG B 482 CG CD NE CZ NH1 NH2 REMARK 470 PRO B 506 CG CD REMARK 470 GLU B 507 CG CD OE1 OE2 REMARK 470 GLN B 509 CG CD OE1 NE2 REMARK 470 ILE B 514 CG1 CG2 CD1 REMARK 470 ASP B 521 CG OD1 OD2 REMARK 470 GLU B 524 CG CD OE1 OE2 REMARK 470 GLU B 525 CG CD OE1 OE2 REMARK 470 PHE B 530 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG B 532 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 536 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 537 CG CD1 CD2 REMARK 470 ARG B 548 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 556 CG CD1 CD2 REMARK 470 LEU B 561 CG CD1 CD2 REMARK 470 ARG B 563 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 564 CG CD OE1 OE2 REMARK 470 ILE B 566 CG1 CG2 CD1 REMARK 470 GLN B 585 CG CD OE1 NE2 REMARK 470 ARG B 587 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 598 CG OD1 OD2 REMARK 470 LYS B 599 CG CD CE NZ REMARK 470 ARG B 608 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 611 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 664 CG CD CE NZ REMARK 470 VAL B 666 CG1 CG2 REMARK 470 ARG B 668 CG CD NE CZ NH1 NH2 REMARK 470 HIS B 673 CG ND1 CD2 CE1 NE2 REMARK 470 LEU B 674 CG CD1 CD2 REMARK 470 LYS B 675 CG CD CE NZ REMARK 470 GLU B 676 CG CD OE1 OE2 REMARK 470 ARG B 679 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 681 CG CD CE NZ REMARK 470 DG C 11 C8 N7 C5 C6 O6 N1 C2 REMARK 470 DG C 11 N2 N3 C4 REMARK 470 DG C 12 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DG C 12 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG C 12 C2 N2 N3 C4 REMARK 470 DT C 18 P OP1 OP2 O5' C5' C4' O4' REMARK 470 DT C 18 C3' C2' C1' N1 C2 O2 N3 REMARK 470 DT C 18 C4 O4 C5 C7 C6 REMARK 470 C H 8 P OP1 OP2 O5' C5' C4' O4' REMARK 470 C H 8 C3' C2' O2' C1' N1 C2 O2 REMARK 470 C H 8 N3 C4 N4 C5 C6 REMARK 470 U H 9 C2 O2 N3 C4 O4 C5 C6 REMARK 470 C H 10 C2 O2 N3 C4 N4 C5 C6 REMARK 470 G H 19 N9 C8 N7 C5 C6 O6 N1 REMARK 470 G H 19 C2 N2 N3 C4 REMARK 470 DA X 17 P OP1 OP2 O5' C5' C4' O4' REMARK 470 DA X 17 C3' C2' C1' N9 C8 N7 C5 REMARK 470 DA X 17 C6 N6 N1 C2 N3 C4 REMARK 470 U Y 9 P OP1 OP2 O5' C5' C4' O4' REMARK 470 U Y 9 C3' C2' O2' C1' N1 C2 O2 REMARK 470 U Y 9 N3 C4 O4 C5 C6 REMARK 470 C Y 10 N1 C2 O2 N3 C4 N4 C5 REMARK 470 C Y 10 C6 REMARK 470 G Y 19 N9 C8 N7 C5 C6 O6 N1 REMARK 470 G Y 19 C2 N2 N3 C4 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 GLY A 144 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 191 CE NZ REMARK 480 GLU A 343 CD OE1 OE2 REMARK 480 GLU A 517 CG CD OE1 OE2 REMARK 480 GLU B 214 CG CD OE1 OE2 REMARK 480 LYS B 320 CG CD CE NZ REMARK 480 ARG B 444 CD NE CZ NH1 NH2 REMARK 480 GLU B 517 CG CD OE1 OE2 REMARK 480 GLU B 665 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY A 144 OE1 GLU A 176 1.92 REMARK 500 N ILE B 173 OP1 DT X 9 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH1 ARG A 236 O GLN B 234 2755 2.05 REMARK 500 O GLN A 234 NH1 ARG B 236 2755 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT C 1 P DT C 1 OP3 -0.087 REMARK 500 DT C 18 O3' DA C 19 P -0.152 REMARK 500 C H 8 O3' U H 9 P -0.082 REMARK 500 DT X 1 P DT X 1 OP3 -0.089 REMARK 500 DA X 17 O3' DT X 18 P -0.082 REMARK 500 C Y 10 P C Y 10 OP1 0.124 REMARK 500 C Y 10 P C Y 10 OP2 0.126 REMARK 500 U Y 9 O3' C Y 10 P -0.127 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 323 N - CA - C ANGL. DEV. = -15.0 DEGREES REMARK 500 GLY A 481 N - CA - C ANGL. DEV. = -20.1 DEGREES REMARK 500 ASP A 598 N - CA - C ANGL. DEV. = 20.0 DEGREES REMARK 500 HIS A 607 N - CA - C ANGL. DEV. = -19.3 DEGREES REMARK 500 PRO B 97 N - CA - CB ANGL. DEV. = 7.3 DEGREES REMARK 500 PRO B 169 C - N - CA ANGL. DEV. = 9.2 DEGREES REMARK 500 PRO B 438 C - N - CA ANGL. DEV. = -10.3 DEGREES REMARK 500 HIS B 607 N - CA - C ANGL. DEV. = -18.2 DEGREES REMARK 500 DA C 3 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DT C 6 N1 - C1' - C2' ANGL. DEV. = 12.5 DEGREES REMARK 500 DT C 6 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DA C 7 O4' - C1' - N9 ANGL. DEV. = 3.5 DEGREES REMARK 500 DT C 9 N1 - C1' - C2' ANGL. DEV. = 10.9 DEGREES REMARK 500 DA C 10 N9 - C1' - C2' ANGL. DEV. = 16.1 DEGREES REMARK 500 DA C 10 C8 - N9 - C1' ANGL. DEV. = -15.3 DEGREES REMARK 500 DA C 10 C4 - N9 - C1' ANGL. DEV. = 15.8 DEGREES REMARK 500 DG C 11 O3' - P - OP1 ANGL. DEV. = 6.8 DEGREES REMARK 500 DA X 3 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DT X 6 O4' - C1' - C2' ANGL. DEV. = 3.2 DEGREES REMARK 500 DT X 6 N1 - C1' - C2' ANGL. DEV. = 12.7 DEGREES REMARK 500 DT X 6 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DA X 7 O4' - C1' - N9 ANGL. DEV. = 3.2 DEGREES REMARK 500 DT X 9 N1 - C1' - C2' ANGL. DEV. = 11.0 DEGREES REMARK 500 DA X 10 O3' - P - O5' ANGL. DEV. = 16.6 DEGREES REMARK 500 DA X 19 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 C Y 10 OP1 - P - OP2 ANGL. DEV. = -10.1 DEGREES REMARK 500 C Y 12 C3' - O3' - P ANGL. DEV. = -10.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 12 48.90 -75.65 REMARK 500 PRO A 37 -153.80 -75.71 REMARK 500 MET A 60 77.17 -115.22 REMARK 500 PRO A 70 -8.19 -57.25 REMARK 500 ARG A 81 99.88 -167.46 REMARK 500 PRO A 97 155.34 -48.48 REMARK 500 SER A 107 -31.14 -36.64 REMARK 500 PRO A 143 82.33 -19.75 REMARK 500 ASP A 154 134.59 -173.46 REMARK 500 GLU A 176 43.08 -107.49 REMARK 500 MET A 177 -167.93 -118.88 REMARK 500 LEU A 179 -67.11 -27.28 REMARK 500 ALA A 184 -7.66 -50.35 REMARK 500 LEU A 205 -78.29 -68.18 REMARK 500 PRO A 218 112.10 -33.37 REMARK 500 LEU A 224 -70.15 -55.83 REMARK 500 ASP A 225 -31.45 -39.85 REMARK 500 PRO A 247 49.63 -70.84 REMARK 500 LYS A 248 -33.11 -143.41 REMARK 500 PRO A 250 20.77 -61.92 REMARK 500 THR A 266 89.95 -152.28 REMARK 500 LEU A 267 72.81 36.10 REMARK 500 GLU A 268 33.10 -145.99 REMARK 500 GLU A 274 -24.31 -144.29 REMARK 500 ALA A 278 92.99 -53.42 REMARK 500 GLU A 292 -79.21 -59.72 REMARK 500 SER A 328 -65.85 -99.37 REMARK 500 LEU A 334 1.01 -65.87 REMARK 500 GLN A 342 168.46 170.68 REMARK 500 ASP A 352 -126.97 -124.15 REMARK 500 ALA A 354 -147.41 -119.40 REMARK 500 GLN A 387 7.13 -63.20 REMARK 500 GLU A 401 7.17 -67.18 REMARK 500 VAL A 403 112.98 -35.76 REMARK 500 PRO A 438 94.39 -62.80 REMARK 500 GLU A 441 22.42 -67.99 REMARK 500 SER A 484 -169.67 -162.16 REMARK 500 HIS A 500 118.34 -33.99 REMARK 500 ILE A 514 107.41 -59.77 REMARK 500 LEU A 596 -143.17 -126.62 REMARK 500 GLU A 597 150.82 -40.58 REMARK 500 ASP A 598 -12.18 -43.21 REMARK 500 LEU A 604 67.13 -104.69 REMARK 500 HIS A 607 -176.85 -174.34 REMARK 500 ASP A 625 -4.91 -146.16 REMARK 500 SER A 645 -74.38 -87.51 REMARK 500 ALA A 648 140.76 -179.31 REMARK 500 HIS A 673 -10.71 -48.78 REMARK 500 LEU A 674 44.82 -81.25 REMARK 500 LYS A 675 -93.47 -57.71 REMARK 500 REMARK 500 THIS ENTRY HAS 112 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DG C 2 0.05 SIDE CHAIN REMARK 500 DT C 9 0.07 SIDE CHAIN REMARK 500 DT X 6 0.08 SIDE CHAIN REMARK 500 DG X 8 0.07 SIDE CHAIN REMARK 500 DT X 9 0.09 SIDE CHAIN REMARK 500 DG X 20 0.06 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 DT C 6 -22.1 D D OUTSIDE RANGE REMARK 500 DA C 10 -23.0 D D OUTSIDE RANGE REMARK 500 DT X 6 -20.9 D D OUTSIDE RANGE REMARK 500 TRP A 283 24.5 L L OUTSIDE RANGE REMARK 500 GLN A 355 24.8 L L OUTSIDE RANGE REMARK 500 ASP A 598 20.1 L L OUTSIDE RANGE REMARK 500 TRP B 283 24.3 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 686 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 22 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG X 22 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3DLB RELATED DB: PDB REMARK 900 SAME PROTEIN WITH DIFFERENT LIGAND REMARK 900 RELATED ID: 3DLH RELATED DB: PDB REMARK 900 SAME PROTEIN WITH DIFFERENT LIGAND DBREF 3F73 A 1 685 UNP Q746M7 Q746M7_THET2 1 685 DBREF 3F73 B 1 685 UNP Q746M7 Q746M7_THET2 1 685 DBREF 3F73 C 1 21 PDB 3F73 3F73 1 21 DBREF 3F73 X 1 21 PDB 3F73 3F73 1 21 DBREF 3F73 H 1 20 PDB 3F73 3F73 1 20 DBREF 3F73 Y 1 20 PDB 3F73 3F73 1 20 SEQRES 1 A 685 MET ASN HIS LEU GLY LYS THR GLU VAL PHE LEU ASN ARG SEQRES 2 A 685 PHE ALA LEU ARG PRO LEU ASN PRO GLU GLU LEU ARG PRO SEQRES 3 A 685 TRP ARG LEU GLU VAL VAL LEU ASP PRO PRO PRO GLY ARG SEQRES 4 A 685 GLU GLU VAL TYR PRO LEU LEU ALA GLN VAL ALA ARG ARG SEQRES 5 A 685 ALA GLY GLY VAL THR VAL ARG MET GLY ASP GLY LEU ALA SEQRES 6 A 685 SER TRP SER PRO PRO GLU VAL LEU VAL LEU GLU GLY THR SEQRES 7 A 685 LEU ALA ARG MET GLY GLN THR TYR ALA TYR ARG LEU TYR SEQRES 8 A 685 PRO LYS GLY ARG ARG PRO LEU ASP PRO LYS ASP PRO GLY SEQRES 9 A 685 GLU ARG SER VAL LEU SER ALA LEU ALA ARG ARG LEU LEU SEQRES 10 A 685 GLN GLU ARG LEU ARG ARG LEU GLU GLY VAL TRP VAL GLU SEQRES 11 A 685 GLY LEU ALA VAL TYR ARG ARG GLU HIS ALA ARG GLY PRO SEQRES 12 A 685 GLY TRP ARG VAL LEU GLY GLY ALA VAL LEU ASP LEU TRP SEQRES 13 A 685 VAL SER ASP SER GLY ALA PHE LEU LEU GLU VAL ASP PRO SEQRES 14 A 685 ALA TYR ARG ILE LEU CYS GLU MET SER LEU GLU ALA TRP SEQRES 15 A 685 LEU ALA GLN GLY HIS PRO LEU PRO LYS ARG VAL ARG ASN SEQRES 16 A 685 ALA TYR ASP ARG ARG THR TRP GLU LEU LEU ARG LEU GLY SEQRES 17 A 685 GLU GLU ASP PRO LYS GLU LEU PRO LEU PRO GLY GLY LEU SEQRES 18 A 685 SER LEU LEU ASP TYR HIS ALA SER LYS GLY ARG LEU GLN SEQRES 19 A 685 GLY ARG GLU GLY GLY ARG VAL ALA TRP VAL ALA ASP PRO SEQRES 20 A 685 LYS ASP PRO ARG LYS PRO ILE PRO HIS LEU THR GLY LEU SEQRES 21 A 685 LEU VAL PRO VAL LEU THR LEU GLU ASP LEU HIS GLU GLU SEQRES 22 A 685 GLU GLY SER LEU ALA LEU SER LEU PRO TRP GLU GLU ARG SEQRES 23 A 685 ARG ARG ARG THR ARG GLU ILE ALA SER TRP ILE GLY ARG SEQRES 24 A 685 ARG LEU GLY LEU GLY THR PRO GLU ALA VAL ARG ALA GLN SEQRES 25 A 685 ALA TYR ARG LEU SER ILE PRO LYS LEU MET GLY ARG ARG SEQRES 26 A 685 ALA VAL SER LYS PRO ALA ASP ALA LEU ARG VAL GLY PHE SEQRES 27 A 685 TYR ARG ALA GLN GLU THR ALA LEU ALA LEU LEU ARG LEU SEQRES 28 A 685 ASP GLY ALA GLN GLY TRP PRO GLU PHE LEU ARG ARG ALA SEQRES 29 A 685 LEU LEU ARG ALA PHE GLY ALA SER GLY ALA SER LEU ARG SEQRES 30 A 685 LEU HIS THR LEU HIS ALA HIS PRO SER GLN GLY LEU ALA SEQRES 31 A 685 PHE ARG GLU ALA LEU ARG LYS ALA LYS GLU GLU GLY VAL SEQRES 32 A 685 GLN ALA VAL LEU VAL LEU THR PRO PRO MET ALA TRP GLU SEQRES 33 A 685 ASP ARG ASN ARG LEU LYS ALA LEU LEU LEU ARG GLU GLY SEQRES 34 A 685 LEU PRO SER GLN ILE LEU ASN VAL PRO LEU ARG GLU GLU SEQRES 35 A 685 GLU ARG HIS ARG TRP GLU ASN ALA LEU LEU GLY LEU LEU SEQRES 36 A 685 ALA LYS ALA GLY LEU GLN VAL VAL ALA LEU SER GLY ALA SEQRES 37 A 685 TYR PRO ALA GLU LEU ALA VAL GLY PHE ASP ALA GLY GLY SEQRES 38 A 685 ARG GLU SER PHE ARG PHE GLY GLY ALA ALA CYS ALA VAL SEQRES 39 A 685 GLY GLY ASP GLY GLY HIS LEU LEU TRP THR LEU PRO GLU SEQRES 40 A 685 ALA GLN ALA GLY GLU ARG ILE PRO GLN GLU VAL VAL TRP SEQRES 41 A 685 ASP LEU LEU GLU GLU THR LEU TRP ALA PHE ARG ARG LYS SEQRES 42 A 685 ALA GLY ARG LEU PRO SER ARG VAL LEU LEU LEU ARG ASP SEQRES 43 A 685 GLY ARG VAL PRO GLN ASP GLU PHE ALA LEU ALA LEU GLU SEQRES 44 A 685 ALA LEU ALA ARG GLU GLY ILE ALA TYR ASP LEU VAL SER SEQRES 45 A 685 VAL ARG LYS SER GLY GLY GLY ARG VAL TYR PRO VAL GLN SEQRES 46 A 685 GLY ARG LEU ALA ASP GLY LEU TYR VAL PRO LEU GLU ASP SEQRES 47 A 685 LYS THR PHE LEU LEU LEU THR VAL HIS ARG ASP PHE ARG SEQRES 48 A 685 GLY THR PRO ARG PRO LEU LYS LEU VAL HIS GLU ALA GLY SEQRES 49 A 685 ASP THR PRO LEU GLU ALA LEU ALA HIS GLN ILE PHE HIS SEQRES 50 A 685 LEU THR ARG LEU TYR PRO ALA SER GLY PHE ALA PHE PRO SEQRES 51 A 685 ARG LEU PRO ALA PRO LEU HIS LEU ALA ASP ARG LEU VAL SEQRES 52 A 685 LYS GLU VAL GLY ARG LEU GLY ILE ARG HIS LEU LYS GLU SEQRES 53 A 685 VAL ASP ARG GLU LYS LEU PHE PHE VAL SEQRES 1 B 685 MET ASN HIS LEU GLY LYS THR GLU VAL PHE LEU ASN ARG SEQRES 2 B 685 PHE ALA LEU ARG PRO LEU ASN PRO GLU GLU LEU ARG PRO SEQRES 3 B 685 TRP ARG LEU GLU VAL VAL LEU ASP PRO PRO PRO GLY ARG SEQRES 4 B 685 GLU GLU VAL TYR PRO LEU LEU ALA GLN VAL ALA ARG ARG SEQRES 5 B 685 ALA GLY GLY VAL THR VAL ARG MET GLY ASP GLY LEU ALA SEQRES 6 B 685 SER TRP SER PRO PRO GLU VAL LEU VAL LEU GLU GLY THR SEQRES 7 B 685 LEU ALA ARG MET GLY GLN THR TYR ALA TYR ARG LEU TYR SEQRES 8 B 685 PRO LYS GLY ARG ARG PRO LEU ASP PRO LYS ASP PRO GLY SEQRES 9 B 685 GLU ARG SER VAL LEU SER ALA LEU ALA ARG ARG LEU LEU SEQRES 10 B 685 GLN GLU ARG LEU ARG ARG LEU GLU GLY VAL TRP VAL GLU SEQRES 11 B 685 GLY LEU ALA VAL TYR ARG ARG GLU HIS ALA ARG GLY PRO SEQRES 12 B 685 GLY TRP ARG VAL LEU GLY GLY ALA VAL LEU ASP LEU TRP SEQRES 13 B 685 VAL SER ASP SER GLY ALA PHE LEU LEU GLU VAL ASP PRO SEQRES 14 B 685 ALA TYR ARG ILE LEU CYS GLU MET SER LEU GLU ALA TRP SEQRES 15 B 685 LEU ALA GLN GLY HIS PRO LEU PRO LYS ARG VAL ARG ASN SEQRES 16 B 685 ALA TYR ASP ARG ARG THR TRP GLU LEU LEU ARG LEU GLY SEQRES 17 B 685 GLU GLU ASP PRO LYS GLU LEU PRO LEU PRO GLY GLY LEU SEQRES 18 B 685 SER LEU LEU ASP TYR HIS ALA SER LYS GLY ARG LEU GLN SEQRES 19 B 685 GLY ARG GLU GLY GLY ARG VAL ALA TRP VAL ALA ASP PRO SEQRES 20 B 685 LYS ASP PRO ARG LYS PRO ILE PRO HIS LEU THR GLY LEU SEQRES 21 B 685 LEU VAL PRO VAL LEU THR LEU GLU ASP LEU HIS GLU GLU SEQRES 22 B 685 GLU GLY SER LEU ALA LEU SER LEU PRO TRP GLU GLU ARG SEQRES 23 B 685 ARG ARG ARG THR ARG GLU ILE ALA SER TRP ILE GLY ARG SEQRES 24 B 685 ARG LEU GLY LEU GLY THR PRO GLU ALA VAL ARG ALA GLN SEQRES 25 B 685 ALA TYR ARG LEU SER ILE PRO LYS LEU MET GLY ARG ARG SEQRES 26 B 685 ALA VAL SER LYS PRO ALA ASP ALA LEU ARG VAL GLY PHE SEQRES 27 B 685 TYR ARG ALA GLN GLU THR ALA LEU ALA LEU LEU ARG LEU SEQRES 28 B 685 ASP GLY ALA GLN GLY TRP PRO GLU PHE LEU ARG ARG ALA SEQRES 29 B 685 LEU LEU ARG ALA PHE GLY ALA SER GLY ALA SER LEU ARG SEQRES 30 B 685 LEU HIS THR LEU HIS ALA HIS PRO SER GLN GLY LEU ALA SEQRES 31 B 685 PHE ARG GLU ALA LEU ARG LYS ALA LYS GLU GLU GLY VAL SEQRES 32 B 685 GLN ALA VAL LEU VAL LEU THR PRO PRO MET ALA TRP GLU SEQRES 33 B 685 ASP ARG ASN ARG LEU LYS ALA LEU LEU LEU ARG GLU GLY SEQRES 34 B 685 LEU PRO SER GLN ILE LEU ASN VAL PRO LEU ARG GLU GLU SEQRES 35 B 685 GLU ARG HIS ARG TRP GLU ASN ALA LEU LEU GLY LEU LEU SEQRES 36 B 685 ALA LYS ALA GLY LEU GLN VAL VAL ALA LEU SER GLY ALA SEQRES 37 B 685 TYR PRO ALA GLU LEU ALA VAL GLY PHE ASP ALA GLY GLY SEQRES 38 B 685 ARG GLU SER PHE ARG PHE GLY GLY ALA ALA CYS ALA VAL SEQRES 39 B 685 GLY GLY ASP GLY GLY HIS LEU LEU TRP THR LEU PRO GLU SEQRES 40 B 685 ALA GLN ALA GLY GLU ARG ILE PRO GLN GLU VAL VAL TRP SEQRES 41 B 685 ASP LEU LEU GLU GLU THR LEU TRP ALA PHE ARG ARG LYS SEQRES 42 B 685 ALA GLY ARG LEU PRO SER ARG VAL LEU LEU LEU ARG ASP SEQRES 43 B 685 GLY ARG VAL PRO GLN ASP GLU PHE ALA LEU ALA LEU GLU SEQRES 44 B 685 ALA LEU ALA ARG GLU GLY ILE ALA TYR ASP LEU VAL SER SEQRES 45 B 685 VAL ARG LYS SER GLY GLY GLY ARG VAL TYR PRO VAL GLN SEQRES 46 B 685 GLY ARG LEU ALA ASP GLY LEU TYR VAL PRO LEU GLU ASP SEQRES 47 B 685 LYS THR PHE LEU LEU LEU THR VAL HIS ARG ASP PHE ARG SEQRES 48 B 685 GLY THR PRO ARG PRO LEU LYS LEU VAL HIS GLU ALA GLY SEQRES 49 B 685 ASP THR PRO LEU GLU ALA LEU ALA HIS GLN ILE PHE HIS SEQRES 50 B 685 LEU THR ARG LEU TYR PRO ALA SER GLY PHE ALA PHE PRO SEQRES 51 B 685 ARG LEU PRO ALA PRO LEU HIS LEU ALA ASP ARG LEU VAL SEQRES 52 B 685 LYS GLU VAL GLY ARG LEU GLY ILE ARG HIS LEU LYS GLU SEQRES 53 B 685 VAL ASP ARG GLU LYS LEU PHE PHE VAL SEQRES 1 C 21 DT DG DA DG DG DT DA DG DT DA DG DG DT SEQRES 2 C 21 DT DG DT DA DT DA DG DT SEQRES 1 H 20 U A U A C A A C U C A C U SEQRES 2 H 20 A C C U C G U SEQRES 1 X 21 DT DG DA DG DG DT DA DG DT DA DG DG DT SEQRES 2 X 21 DT DG DT DA DT DA DG DT SEQRES 1 Y 20 U A U A C A A C U C A C U SEQRES 2 Y 20 A C C U C G U HET MG A 686 1 HET MG C 22 1 HET PO4 C 23 5 HET MG X 22 1 HETNAM MG MAGNESIUM ION HETNAM PO4 PHOSPHATE ION FORMUL 7 MG 3(MG 2+) FORMUL 9 PO4 O4 P 3- FORMUL 11 HOH *16(H2 O) HELIX 1 1 ASN A 20 ARG A 25 1 6 HELIX 2 2 VAL A 42 GLY A 54 1 13 HELIX 3 3 ASP A 102 ARG A 123 1 22 HELIX 4 4 SER A 178 ALA A 184 1 7 HELIX 5 5 SER A 222 LYS A 230 1 9 HELIX 6 6 PRO A 282 GLY A 302 1 21 HELIX 7 7 LYS A 329 ALA A 331 5 3 HELIX 8 8 ASP A 332 GLY A 337 1 6 HELIX 9 9 PRO A 358 SER A 372 1 15 HELIX 10 10 HIS A 384 GLN A 387 5 4 HELIX 11 11 GLY A 388 LYS A 399 1 12 HELIX 12 12 ALA A 414 GLU A 428 1 15 HELIX 13 13 GLU A 443 GLY A 459 1 17 HELIX 14 14 ILE A 514 GLY A 535 1 22 HELIX 15 15 PRO A 550 GLU A 553 5 4 HELIX 16 16 PHE A 554 LEU A 561 1 8 HELIX 17 17 ALA A 562 GLU A 564 5 3 HELIX 18 18 PRO A 627 THR A 639 1 13 HELIX 19 19 PRO A 653 GLY A 670 1 18 HELIX 20 20 ILE A 671 LEU A 674 5 4 HELIX 21 21 GLU B 41 GLY B 54 1 14 HELIX 22 22 ASP B 102 ARG B 123 1 22 HELIX 23 23 SER B 178 GLN B 185 1 8 HELIX 24 24 SER B 222 LYS B 230 1 9 HELIX 25 25 LEU B 257 GLY B 259 5 3 HELIX 26 26 PRO B 282 ARG B 300 1 19 HELIX 27 27 LYS B 329 ALA B 331 5 3 HELIX 28 28 ASP B 332 GLY B 337 1 6 HELIX 29 29 PRO B 358 ALA B 371 1 14 HELIX 30 30 GLY B 388 GLU B 400 1 13 HELIX 31 31 ALA B 414 GLU B 428 1 15 HELIX 32 32 GLU B 443 ALA B 458 1 16 HELIX 33 33 ILE B 514 ARG B 532 1 19 HELIX 34 34 PRO B 550 GLU B 553 5 4 HELIX 35 35 PHE B 554 GLY B 565 1 12 HELIX 36 36 PRO B 627 LEU B 638 1 12 HELIX 37 37 PRO B 653 LEU B 669 1 17 SHEET 1 A14 TRP A 128 GLU A 130 0 SHEET 2 A14 ALA A 133 GLU A 138 -1 O TYR A 135 N TRP A 128 SHEET 3 A14 TRP A 145 VAL A 157 -1 O ALA A 151 N VAL A 134 SHEET 4 A14 ALA A 162 CYS A 175 -1 O LEU A 174 N ARG A 146 SHEET 5 A14 LYS A 6 PRO A 18 -1 N PHE A 14 O LEU A 165 SHEET 6 A14 GLU A 307 ARG A 315 -1 O GLU A 307 N ALA A 15 SHEET 7 A14 LEU A 592 PRO A 595 -1 O TYR A 593 N TYR A 314 SHEET 8 A14 THR A 600 LEU A 604 -1 O LEU A 602 N VAL A 594 SHEET 9 A14 LEU A 617 ALA A 623 -1 O LEU A 617 N LEU A 603 SHEET 10 A14 ALA A 567 ARG A 574 -1 N LEU A 570 O ALA A 623 SHEET 11 A14 ARG A 540 ARG A 545 1 N ARG A 545 O VAL A 573 SHEET 12 A14 LEU A 473 ALA A 479 1 N VAL A 475 O LEU A 542 SHEET 13 A14 GLY A 489 VAL A 494 -1 O CYS A 492 N GLY A 476 SHEET 14 A14 LEU A 502 LEU A 505 -1 O LEU A 502 N ALA A 493 SHEET 1 B 6 TRP A 128 GLU A 130 0 SHEET 2 B 6 ALA A 133 GLU A 138 -1 O TYR A 135 N TRP A 128 SHEET 3 B 6 TRP A 145 VAL A 157 -1 O ALA A 151 N VAL A 134 SHEET 4 B 6 ALA A 162 CYS A 175 -1 O LEU A 174 N ARG A 146 SHEET 5 B 6 LYS A 6 PRO A 18 -1 N PHE A 14 O LEU A 165 SHEET 6 B 6 VAL A 581 PRO A 583 -1 O TYR A 582 N PHE A 10 SHEET 1 C 5 THR A 57 MET A 60 0 SHEET 2 C 5 GLY A 63 SER A 66 -1 O ALA A 65 N VAL A 58 SHEET 3 C 5 TRP A 27 ASP A 34 -1 N TRP A 27 O SER A 66 SHEET 4 C 5 ALA A 87 ARG A 95 -1 O ALA A 87 N ASP A 34 SHEET 5 C 5 GLU A 76 THR A 78 -1 N GLY A 77 O TYR A 88 SHEET 1 D 5 ILE A 254 LEU A 257 0 SHEET 2 D 5 VAL A 241 ALA A 245 -1 N VAL A 244 O ILE A 254 SHEET 3 D 5 THR A 201 LEU A 207 -1 N GLU A 203 O ALA A 245 SHEET 4 D 5 ARG A 192 ASN A 195 -1 N VAL A 193 O TRP A 202 SHEET 5 D 5 LEU A 261 PRO A 263 -1 O VAL A 262 N ARG A 194 SHEET 1 E 3 ALA A 326 VAL A 327 0 SHEET 2 E 3 LEU A 321 MET A 322 -1 N LEU A 321 O VAL A 327 SHEET 3 E 3 ALA A 464 LEU A 465 -1 O ALA A 464 N MET A 322 SHEET 1 F 4 ARG A 377 THR A 380 0 SHEET 2 F 4 ALA A 345 ARG A 350 1 N LEU A 346 O ARG A 377 SHEET 3 F 4 ALA A 405 THR A 410 1 O ALA A 405 N ALA A 347 SHEET 4 F 4 SER A 432 ASN A 436 1 O GLN A 433 N VAL A 408 SHEET 1 G14 TRP B 128 GLU B 130 0 SHEET 2 G14 ALA B 133 GLY B 142 -1 O TYR B 135 N TRP B 128 SHEET 3 G14 TRP B 145 VAL B 157 -1 O VAL B 147 N ALA B 140 SHEET 4 G14 ALA B 162 CYS B 175 -1 O ARG B 172 N LEU B 148 SHEET 5 G14 THR B 7 PRO B 18 -1 N PHE B 14 O LEU B 165 SHEET 6 G14 GLU B 307 ARG B 315 -1 O ALA B 311 N VAL B 9 SHEET 7 G14 LEU B 592 PRO B 595 -1 O TYR B 593 N TYR B 314 SHEET 8 G14 THR B 600 LEU B 604 -1 O LEU B 602 N VAL B 594 SHEET 9 G14 LEU B 617 ALA B 623 -1 O LEU B 619 N PHE B 601 SHEET 10 G14 ALA B 567 ARG B 574 -1 N LEU B 570 O ALA B 623 SHEET 11 G14 ARG B 540 ARG B 545 1 N LEU B 543 O ASP B 569 SHEET 12 G14 LEU B 473 ALA B 479 1 N VAL B 475 O LEU B 542 SHEET 13 G14 GLY B 489 VAL B 494 -1 O CYS B 492 N GLY B 476 SHEET 14 G14 LEU B 502 LEU B 505 -1 O LEU B 502 N ALA B 493 SHEET 1 H 6 TRP B 128 GLU B 130 0 SHEET 2 H 6 ALA B 133 GLY B 142 -1 O TYR B 135 N TRP B 128 SHEET 3 H 6 TRP B 145 VAL B 157 -1 O VAL B 147 N ALA B 140 SHEET 4 H 6 ALA B 162 CYS B 175 -1 O ARG B 172 N LEU B 148 SHEET 5 H 6 THR B 7 PRO B 18 -1 N PHE B 14 O LEU B 165 SHEET 6 H 6 VAL B 581 PRO B 583 -1 O TYR B 582 N PHE B 10 SHEET 1 I 5 THR B 57 MET B 60 0 SHEET 2 I 5 GLY B 63 SER B 66 -1 O ALA B 65 N VAL B 58 SHEET 3 I 5 TRP B 27 ASP B 34 -1 N LEU B 29 O LEU B 64 SHEET 4 I 5 GLN B 84 PRO B 92 -1 O ALA B 87 N ASP B 34 SHEET 5 I 5 GLU B 76 ARG B 81 -1 N GLY B 77 O TYR B 88 SHEET 1 J 4 ALA B 242 ALA B 245 0 SHEET 2 J 4 THR B 201 LEU B 207 -1 N GLU B 203 O ALA B 245 SHEET 3 J 4 ARG B 192 ASN B 195 -1 N VAL B 193 O TRP B 202 SHEET 4 J 4 LEU B 261 PRO B 263 -1 O VAL B 262 N ARG B 194 SHEET 1 K 3 ALA B 326 VAL B 327 0 SHEET 2 K 3 LEU B 321 MET B 322 -1 N LEU B 321 O VAL B 327 SHEET 3 K 3 ALA B 464 LEU B 465 -1 O ALA B 464 N MET B 322 SHEET 1 L 4 ARG B 377 THR B 380 0 SHEET 2 L 4 ALA B 345 ARG B 350 1 N LEU B 346 O HIS B 379 SHEET 3 L 4 ALA B 405 THR B 410 1 O LEU B 407 N ALA B 347 SHEET 4 L 4 SER B 432 ASN B 436 1 O GLN B 433 N VAL B 408 CISPEP 1 ASP A 34 PRO A 35 0 0.20 CISPEP 2 ASP B 34 PRO B 35 0 -0.16 SITE 1 AC1 4 ASP A 478 ASP A 546 ARG A 548 ASP A 660 SITE 1 AC2 4 VAL A 685 DT C 1 DG C 2 DA C 3 SITE 1 AC3 3 VAL B 685 DT X 1 DA X 3 CRYST1 61.162 120.527 109.085 90.00 105.30 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016350 0.000000 0.004473 0.00000 SCALE2 0.000000 0.008297 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009504 0.00000 MASTER 724 0 4 37 73 0 3 6 0 0 0 114 END