HEADER ISOMERASE 23-MAY-08 3D8H TITLE CRYSTAL STRUCTURE OF PHOSPHOGLYCERATE MUTASE FROM CRYPTOSPORIDIUM TITLE 2 PARVUM, CGD7_4270 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOLYTIC PHOSPHOGLYCERATE MUTASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPTOSPORIDIUM PARVUM; SOURCE 3 ORGANISM_TAXID: 353152; SOURCE 4 STRAIN: IOWA II; SOURCE 5 GENE: CGD7_4270; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A-THROMBIN-LIC KEYWDS STRUCTURAL GENOMICS, MALARIA, CRYPTOSPORIDIUM, GLYCOLYSIS, ISOMERASE, KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, SGC EXPDTA X-RAY DIFFRACTION AUTHOR A.K.WERNIMONT,J.LEW,G.WASNEY,Z.ALAM,I.KOZIERADZKI,D.COSSAR, AUTHOR 2 M.SCHAPIRO,A.BOCHKAREV,C.H.ARROWSMITH,C.BOUNTRA,M.WILKSTROM, AUTHOR 3 A.M.EDWARDS,R.HUI,J.D.ARTZ,T.HILLS,STRUCTURAL GENOMICS CONSORTIUM AUTHOR 4 (SGC) REVDAT 6 25-OCT-17 3D8H 1 REMARK REVDAT 5 07-SEP-11 3D8H 1 JRNL REVDAT 4 24-AUG-11 3D8H 1 JRNL REVDAT 3 13-JUL-11 3D8H 1 VERSN REVDAT 2 24-FEB-09 3D8H 1 VERSN REVDAT 1 15-JUL-08 3D8H 0 JRNL AUTH T.HILLS,A.SRIVASTAVA,K.AYI,A.K.WERNIMONT,K.KAIN,A.P.WATERS, JRNL AUTH 2 R.HUI,J.C.PIZARRO JRNL TITL CHARACTERIZATION OF A NEW PHOSPHATASE FROM PLASMODIUM. JRNL REF MOL.BIOCHEM.PARASITOL. V. 179 69 2011 JRNL REFN ISSN 0166-6851 JRNL PMID 21689687 JRNL DOI 10.1016/J.MOLBIOPARA.2011.06.001 REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 39074 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1958 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.01 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.06 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2630 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.29 REMARK 3 BIN R VALUE (WORKING SET) : 0.2820 REMARK 3 BIN FREE R VALUE SET COUNT : 134 REMARK 3 BIN FREE R VALUE : 0.3510 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3641 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 206 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.80000 REMARK 3 B22 (A**2) : -0.25000 REMARK 3 B33 (A**2) : -1.55000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.200 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.169 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.149 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.193 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3755 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5112 ; 1.141 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 469 ; 5.920 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 152 ;33.578 ;24.474 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 652 ;14.967 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;17.109 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 582 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2785 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1747 ; 0.185 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2560 ; 0.299 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 212 ; 0.129 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 38 ; 0.140 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.127 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2416 ; 0.384 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3777 ; 0.647 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1582 ; 1.020 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1331 ; 1.504 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 197 A 205 3 REMARK 3 1 B 197 B 205 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 B (A): 36 ; 0.030 ; 0.050 REMARK 3 LOOSE POSITIONAL 1 B (A): 26 ; 0.120 ; 5.000 REMARK 3 TIGHT THERMAL 1 B (A**2): 36 ; 0.100 ; 0.500 REMARK 3 LOOSE THERMAL 1 B (A**2): 26 ; 0.810 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3D8H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-MAY-08. REMARK 100 THE DEPOSITION ID IS D_1000047724. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-APR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39125 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.010 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : 0.04600 REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.79600 REMARK 200 R SYM FOR SHELL (I) : 0.79600 REMARK 200 FOR SHELL : 2.320 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1XQ9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 0.2 M NH4OAC, 0.1 M REMARK 280 HEPES PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 273K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.12450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.12450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 26.12400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 79.18250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 26.12400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 79.18250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 70.12450 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 26.12400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 79.18250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 70.12450 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 26.12400 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 79.18250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 SER A 249 REMARK 465 GLU A 250 REMARK 465 GLU A 251 REMARK 465 GLU A 252 REMARK 465 LEU A 253 REMARK 465 LYS A 254 REMARK 465 ALA A 255 REMARK 465 LYS A 256 REMARK 465 MET A 257 REMARK 465 GLU A 258 REMARK 465 ALA A 259 REMARK 465 VAL A 260 REMARK 465 ALA A 261 REMARK 465 ASN A 262 REMARK 465 GLN A 263 REMARK 465 GLY A 264 REMARK 465 LYS A 265 REMARK 465 ALA A 266 REMARK 465 LYS A 267 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 SER B 3 REMARK 465 SER B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 SER B 11 REMARK 465 SER B 12 REMARK 465 GLY B 13 REMARK 465 LEU B 14 REMARK 465 VAL B 15 REMARK 465 SER B 249 REMARK 465 GLU B 252 REMARK 465 LEU B 253 REMARK 465 LYS B 254 REMARK 465 ALA B 255 REMARK 465 LYS B 256 REMARK 465 MET B 257 REMARK 465 GLU B 258 REMARK 465 ALA B 259 REMARK 465 VAL B 260 REMARK 465 ALA B 261 REMARK 465 ASN B 262 REMARK 465 GLN B 263 REMARK 465 GLY B 264 REMARK 465 LYS B 265 REMARK 465 ALA B 266 REMARK 465 LYS B 267 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 38 CZ NH1 NH2 REMARK 470 LYS A 123 CG CD CE NZ REMARK 470 ARG A 133 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 134 CZ NH1 NH2 REMARK 470 LYS A 145 CE NZ REMARK 470 GLU A 222 CG CD OE1 OE2 REMARK 470 ASN A 224 CG OD1 ND2 REMARK 470 LYS A 240 CD CE NZ REMARK 470 ILE A 248 CG1 CG2 CD1 REMARK 470 ARG B 17 NE CZ NH1 NH2 REMARK 470 LYS B 123 CG CD CE NZ REMARK 470 ASP B 127 CG OD1 OD2 REMARK 470 VAL B 129 CG1 CG2 REMARK 470 ARG B 133 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 134 CZ NH1 NH2 REMARK 470 GLU B 144 CG CD OE1 OE2 REMARK 470 LYS B 145 CG CD CE NZ REMARK 470 GLU B 218 CD OE1 OE2 REMARK 470 GLU B 222 CG CD OE1 OE2 REMARK 470 ASN B 224 CG OD1 ND2 REMARK 470 ILE B 225 CD1 REMARK 470 LYS B 240 CE NZ REMARK 470 ILE B 248 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN A 219 CD GLN A 219 OE1 0.234 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 40 -65.17 -101.40 REMARK 500 ASN A 93 33.58 -143.53 REMARK 500 VAL A 185 -58.34 -120.95 REMARK 500 ALA A 200 -138.54 -145.83 REMARK 500 ASN B 116 -169.29 -71.72 REMARK 500 PHE B 124 -163.63 -122.49 REMARK 500 VAL B 185 -57.61 -120.04 REMARK 500 ALA B 200 -133.64 -149.99 REMARK 500 REMARK 500 REMARK: NULL DBREF 3D8H A 20 267 UNP Q5CXZ9 Q5CXZ9_CRYPV 2 249 DBREF 3D8H B 20 266 UNP Q5CXZ9 Q5CXZ9_CRYPV 2 249 SEQADV 3D8H MET A 1 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H GLY A 2 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H SER A 3 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H SER A 4 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H HIS A 5 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H HIS A 6 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H HIS A 7 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H HIS A 8 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H HIS A 9 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H HIS A 10 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H SER A 11 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H SER A 12 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H GLY A 13 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H LEU A 14 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H VAL A 15 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H PRO A 16 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H ARG A 17 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H GLY A 18 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H SER A 19 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H MET B 1 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H GLY B 2 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H SER B 3 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H SER B 4 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H HIS B 5 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H HIS B 6 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H HIS B 7 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H HIS B 8 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H HIS B 9 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H HIS B 10 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H SER B 11 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H SER B 12 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H GLY B 13 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H LEU B 14 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H VAL B 15 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H PRO B 16 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H ARG B 17 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H GLY B 18 UNP Q5CXZ9 EXPRESSION TAG SEQADV 3D8H SER B 19 UNP Q5CXZ9 EXPRESSION TAG SEQRES 1 A 267 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 267 LEU VAL PRO ARG GLY SER THR TYR LYS LEU THR LEU ILE SEQRES 3 A 267 ARG HIS GLY GLU SER GLU TRP ASN LYS GLU ASN ARG PHE SEQRES 4 A 267 THR GLY TRP THR ASP VAL SER LEU SER GLU GLN GLY VAL SEQRES 5 A 267 SER GLU ALA ILE GLU ALA GLY ARG MET LEU LEU GLU LYS SEQRES 6 A 267 GLY PHE LYS PHE ASP VAL VAL TYR THR SER VAL LEU LYS SEQRES 7 A 267 ARG ALA ILE MET THR THR TRP THR VAL LEU LYS GLU LEU SEQRES 8 A 267 GLY ASN ILE ASN CYS PRO ILE ILE ASN HIS TRP ARG LEU SEQRES 9 A 267 ASN GLU ARG HIS TYR GLY ALA LEU GLN GLY LEU ASN LYS SEQRES 10 A 267 SER GLU THR ALA SER LYS PHE GLY GLU ASP GLN VAL LYS SEQRES 11 A 267 ILE TRP ARG ARG SER PHE ASP VAL PRO PRO PRO VAL LEU SEQRES 12 A 267 GLU LYS SER ASP PRO ARG TRP PRO GLY ASN GLU LEU ILE SEQRES 13 A 267 TYR LYS GLY ILE CYS PRO SER CYS LEU PRO THR THR GLU SEQRES 14 A 267 CYS LEU LYS ASP THR VAL GLU ARG VAL LYS PRO TYR PHE SEQRES 15 A 267 GLU ASP VAL ILE ALA PRO SER ILE MET SER GLY LYS SER SEQRES 16 A 267 VAL LEU VAL SER ALA HIS GLY ASN SER LEU ARG ALA LEU SEQRES 17 A 267 LEU TYR LEU LEU GLU GLY MET THR PRO GLU GLN ILE LEU SEQRES 18 A 267 GLU VAL ASN ILE PRO THR ALA CYS PRO LEU VAL LEU GLU SEQRES 19 A 267 LEU ASP ASP TYR LEU LYS VAL THR LYS LYS TYR TYR LEU SEQRES 20 A 267 ILE SER GLU GLU GLU LEU LYS ALA LYS MET GLU ALA VAL SEQRES 21 A 267 ALA ASN GLN GLY LYS ALA LYS SEQRES 1 B 267 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 267 LEU VAL PRO ARG GLY SER THR TYR LYS LEU THR LEU ILE SEQRES 3 B 267 ARG HIS GLY GLU SER GLU TRP ASN LYS GLU ASN ARG PHE SEQRES 4 B 267 THR GLY TRP THR ASP VAL SER LEU SER GLU GLN GLY VAL SEQRES 5 B 267 SER GLU ALA ILE GLU ALA GLY ARG MET LEU LEU GLU LYS SEQRES 6 B 267 GLY PHE LYS PHE ASP VAL VAL TYR THR SER VAL LEU LYS SEQRES 7 B 267 ARG ALA ILE MET THR THR TRP THR VAL LEU LYS GLU LEU SEQRES 8 B 267 GLY ASN ILE ASN CYS PRO ILE ILE ASN HIS TRP ARG LEU SEQRES 9 B 267 ASN GLU ARG HIS TYR GLY ALA LEU GLN GLY LEU ASN LYS SEQRES 10 B 267 SER GLU THR ALA SER LYS PHE GLY GLU ASP GLN VAL LYS SEQRES 11 B 267 ILE TRP ARG ARG SER PHE ASP VAL PRO PRO PRO VAL LEU SEQRES 12 B 267 GLU LYS SER ASP PRO ARG TRP PRO GLY ASN GLU LEU ILE SEQRES 13 B 267 TYR LYS GLY ILE CYS PRO SER CYS LEU PRO THR THR GLU SEQRES 14 B 267 CYS LEU LYS ASP THR VAL GLU ARG VAL LYS PRO TYR PHE SEQRES 15 B 267 GLU ASP VAL ILE ALA PRO SER ILE MET SER GLY LYS SER SEQRES 16 B 267 VAL LEU VAL SER ALA HIS GLY ASN SER LEU ARG ALA LEU SEQRES 17 B 267 LEU TYR LEU LEU GLU GLY MET THR PRO GLU GLN ILE LEU SEQRES 18 B 267 GLU VAL ASN ILE PRO THR ALA CYS PRO LEU VAL LEU GLU SEQRES 19 B 267 LEU ASP ASP TYR LEU LYS VAL THR LYS LYS TYR TYR LEU SEQRES 20 B 267 ILE SER GLU GLU GLU LEU LYS ALA LYS MET GLU ALA VAL SEQRES 21 B 267 ALA ASN GLN GLY LYS ALA LYS FORMUL 3 HOH *206(H2 O) HELIX 1 1 SER A 48 LYS A 65 1 18 HELIX 2 2 LEU A 77 GLY A 92 1 16 HELIX 3 3 TRP A 102 ASN A 105 5 4 HELIX 4 4 TYR A 109 GLN A 113 5 5 HELIX 5 5 ASN A 116 PHE A 124 1 9 HELIX 6 6 GLY A 125 SER A 135 1 11 HELIX 7 7 TRP A 150 LYS A 158 5 9 HELIX 8 8 CYS A 161 LEU A 165 5 5 HELIX 9 9 CYS A 170 VAL A 185 1 16 HELIX 10 10 VAL A 185 SER A 192 1 8 HELIX 11 11 HIS A 201 GLY A 214 1 14 HELIX 12 12 THR A 216 LEU A 221 1 6 HELIX 13 13 SER B 31 GLU B 36 1 6 HELIX 14 14 SER B 48 LYS B 65 1 18 HELIX 15 15 LEU B 77 LEU B 91 1 15 HELIX 16 16 TRP B 102 ASN B 105 5 4 HELIX 17 17 TYR B 109 GLN B 113 5 5 HELIX 18 18 SER B 118 PHE B 124 1 7 HELIX 19 19 GLY B 125 SER B 135 1 11 HELIX 20 20 TRP B 150 LYS B 158 5 9 HELIX 21 21 CYS B 161 LEU B 165 5 5 HELIX 22 22 CYS B 170 VAL B 185 1 16 HELIX 23 23 VAL B 185 SER B 192 1 8 HELIX 24 24 HIS B 201 GLY B 214 1 14 HELIX 25 25 THR B 216 GLU B 222 1 7 SHEET 1 A 6 ILE A 98 ASN A 100 0 SHEET 2 A 6 VAL A 71 THR A 74 1 N VAL A 72 O ILE A 99 SHEET 3 A 6 VAL A 196 ALA A 200 1 O SER A 199 N TYR A 73 SHEET 4 A 6 TYR A 21 ARG A 27 1 N THR A 24 O VAL A 198 SHEET 5 A 6 LEU A 231 LEU A 235 -1 O LEU A 233 N LEU A 23 SHEET 6 A 6 VAL A 241 TYR A 246 -1 O TYR A 245 N VAL A 232 SHEET 1 B 6 ILE B 98 ASN B 100 0 SHEET 2 B 6 VAL B 71 THR B 74 1 N VAL B 72 O ILE B 99 SHEET 3 B 6 VAL B 196 ALA B 200 1 O SER B 199 N TYR B 73 SHEET 4 B 6 TYR B 21 ARG B 27 1 N THR B 24 O VAL B 198 SHEET 5 B 6 LEU B 231 LEU B 235 -1 O LEU B 233 N LEU B 23 SHEET 6 B 6 VAL B 241 TYR B 246 -1 O LYS B 243 N GLU B 234 CRYST1 52.248 158.365 140.249 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019139 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006315 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007130 0.00000 MASTER 414 0 0 25 12 0 0 6 0 0 0 42 END