HEADER TRANSFERASE 05-MAR-08 3CGG TITLE CRYSTAL STRUCTURE OF TEHB-LIKE SAM-DEPENDENT METHYLTRANSFERASE TITLE 2 (NP_600671.1) FROM CORYNEBACTERIUM GLUTAMICUM ATCC 13032 KITASATO AT TITLE 3 2.00 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: SAM-DEPENDENT METHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM GLUTAMICUM ATCC 13032; SOURCE 3 ORGANISM_TAXID: 196627; SOURCE 4 STRAIN: DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025; SOURCE 5 GENE: NP_600671.1, CG1645; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS NP_600671.1, TEHB-LIKE SAM-DEPENDENT METHYLTRANSFERASE, KEYWDS 2 METHYLTRANSFERASE DOMAIN, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, KEYWDS 4 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 24-JUL-19 3CGG 1 REMARK LINK REVDAT 4 25-OCT-17 3CGG 1 REMARK REVDAT 3 13-JUL-11 3CGG 1 VERSN REVDAT 2 24-FEB-09 3CGG 1 VERSN REVDAT 1 18-MAR-08 3CGG 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF TEHB-LIKE SAM-DEPENDENT JRNL TITL 2 METHYLTRANSFERASE (NP_600671.1) FROM CORYNEBACTERIUM JRNL TITL 3 GLUTAMICUM ATCC 13032 KITASATO AT 2.00 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 28741 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1455 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1962 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE SET COUNT : 130 REMARK 3 BIN FREE R VALUE : 0.2880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2820 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 71 REMARK 3 SOLVENT ATOMS : 274 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 28.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.23000 REMARK 3 B22 (A**2) : 0.58000 REMARK 3 B33 (A**2) : -0.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.164 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.150 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.105 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.250 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3086 ; 0.015 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2113 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4183 ; 1.827 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5101 ; 0.987 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 398 ; 6.071 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 155 ;36.979 ;24.065 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 469 ;15.032 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;21.126 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 430 ; 0.167 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3621 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 672 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 607 ; 0.199 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2278 ; 0.202 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1513 ; 0.174 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1584 ; 0.087 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 235 ; 0.152 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.073 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 11 ; 0.203 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 83 ; 0.230 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.117 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1983 ; 1.872 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 804 ; 0.598 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3033 ; 2.793 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1284 ; 4.842 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1150 ; 6.516 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 31 A 194 4 REMARK 3 1 B 31 B 194 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 2035 ; 0.550 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 2035 ; 1.180 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 194 REMARK 3 ORIGIN FOR THE GROUP (A): 26.8987 46.6452 16.5100 REMARK 3 T TENSOR REMARK 3 T11: -0.0527 T22: -0.0822 REMARK 3 T33: -0.0866 T12: -0.0044 REMARK 3 T13: -0.0007 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 1.7548 L22: 1.0129 REMARK 3 L33: 1.2934 L12: 0.0606 REMARK 3 L13: 0.1531 L23: 0.3875 REMARK 3 S TENSOR REMARK 3 S11: 0.0111 S12: 0.0920 S13: -0.0432 REMARK 3 S21: 0.0077 S22: 0.0118 S23: -0.0528 REMARK 3 S31: 0.0881 S32: -0.0055 S33: -0.0229 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 11 B 194 REMARK 3 ORIGIN FOR THE GROUP (A): 0.2262 51.3812 31.0345 REMARK 3 T TENSOR REMARK 3 T11: -0.0571 T22: -0.0276 REMARK 3 T33: -0.0594 T12: 0.0282 REMARK 3 T13: 0.0030 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 2.3259 L22: 0.5056 REMARK 3 L33: 1.3894 L12: -0.2936 REMARK 3 L13: -0.1204 L23: 0.1335 REMARK 3 S TENSOR REMARK 3 S11: 0.0321 S12: -0.0215 S13: 0.1462 REMARK 3 S21: 0.0039 S22: 0.0173 S23: 0.0724 REMARK 3 S31: -0.0215 S32: -0.1361 S33: -0.0494 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. REMARK 3 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. REMARK 3 4. 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID (NHE) AND CITRATE REMARK 3 (CIT) REMARK 3 FROM CRYSTALLIZATION AND ETHYLENE GLYCOL (EDO) FROM CRYO SOLUTION REMARK 3 WERE MODELED. REMARK 4 REMARK 4 3CGG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAR-08. REMARK 100 THE DEPOSITION ID IS D_1000046746. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JAN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837, 0.97978 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, TOROID REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28773 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 29.062 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : 0.09300 REMARK 200 FOR THE DATA SET : 6.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.66700 REMARK 200 R SYM FOR SHELL (I) : 0.66700 REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, AUTOSHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 1.0M SODIUM CITRATE, 0.1M REMARK 280 CHES PH 9.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.66500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.21450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.69900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.21450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.66500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.69900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE CRYSTAL PACKING ANALYSIS SUPPORTS REMARK 300 THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION REMARK 300 STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 TRP A 4 REMARK 465 LYS A 5 REMARK 465 GLU A 6 REMARK 465 LEU A 7 REMARK 465 THR A 8 REMARK 465 GLY B 0 REMARK 465 MSE B 1 REMARK 465 THR B 2 REMARK 465 THR B 3 REMARK 465 TRP B 4 REMARK 465 LYS B 5 REMARK 465 GLU B 6 REMARK 465 LEU B 7 REMARK 465 THR B 8 REMARK 465 ASP B 9 REMARK 465 ASN B 10 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 9 CG OD1 OD2 REMARK 470 LEU A 25 CD1 CD2 REMARK 470 ARG B 23 NH1 NH2 REMARK 470 LYS B 194 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 177 30.52 70.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NHE A 195 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NHE A 196 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT B 195 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 197 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 198 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 196 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 199 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 197 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 198 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 372498 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3CGG A 1 194 UNP Q6M5C6 Q6M5C6_CORGL 1 194 DBREF 3CGG B 1 194 UNP Q6M5C6 Q6M5C6_CORGL 1 194 SEQADV 3CGG GLY A 0 UNP Q6M5C6 LEADER SEQUENCE SEQADV 3CGG GLY B 0 UNP Q6M5C6 LEADER SEQUENCE SEQRES 1 A 195 GLY MSE THR THR TRP LYS GLU LEU THR ASP ASN ASN PRO SEQRES 2 A 195 ALA HIS SER GLU ASN TYR ALA GLN ARG TRP ARG ASN LEU SEQRES 3 A 195 ALA ALA ALA GLY ASN ASP ILE TYR GLY GLU ALA ARG LEU SEQRES 4 A 195 ILE ASP ALA MSE ALA PRO ARG GLY ALA LYS ILE LEU ASP SEQRES 5 A 195 ALA GLY CYS GLY GLN GLY ARG ILE GLY GLY TYR LEU SER SEQRES 6 A 195 LYS GLN GLY HIS ASP VAL LEU GLY THR ASP LEU ASP PRO SEQRES 7 A 195 ILE LEU ILE ASP TYR ALA LYS GLN ASP PHE PRO GLU ALA SEQRES 8 A 195 ARG TRP VAL VAL GLY ASP LEU SER VAL ASP GLN ILE SER SEQRES 9 A 195 GLU THR ASP PHE ASP LEU ILE VAL SER ALA GLY ASN VAL SEQRES 10 A 195 MSE GLY PHE LEU ALA GLU ASP GLY ARG GLU PRO ALA LEU SEQRES 11 A 195 ALA ASN ILE HIS ARG ALA LEU GLY ALA ASP GLY ARG ALA SEQRES 12 A 195 VAL ILE GLY PHE GLY ALA GLY ARG GLY TRP VAL PHE GLY SEQRES 13 A 195 ASP PHE LEU GLU VAL ALA GLU ARG VAL GLY LEU GLU LEU SEQRES 14 A 195 GLU ASN ALA PHE GLU SER TRP ASP LEU LYS PRO PHE VAL SEQRES 15 A 195 GLN GLY SER GLU PHE LEU VAL ALA VAL PHE THR LYS LYS SEQRES 1 B 195 GLY MSE THR THR TRP LYS GLU LEU THR ASP ASN ASN PRO SEQRES 2 B 195 ALA HIS SER GLU ASN TYR ALA GLN ARG TRP ARG ASN LEU SEQRES 3 B 195 ALA ALA ALA GLY ASN ASP ILE TYR GLY GLU ALA ARG LEU SEQRES 4 B 195 ILE ASP ALA MSE ALA PRO ARG GLY ALA LYS ILE LEU ASP SEQRES 5 B 195 ALA GLY CYS GLY GLN GLY ARG ILE GLY GLY TYR LEU SER SEQRES 6 B 195 LYS GLN GLY HIS ASP VAL LEU GLY THR ASP LEU ASP PRO SEQRES 7 B 195 ILE LEU ILE ASP TYR ALA LYS GLN ASP PHE PRO GLU ALA SEQRES 8 B 195 ARG TRP VAL VAL GLY ASP LEU SER VAL ASP GLN ILE SER SEQRES 9 B 195 GLU THR ASP PHE ASP LEU ILE VAL SER ALA GLY ASN VAL SEQRES 10 B 195 MSE GLY PHE LEU ALA GLU ASP GLY ARG GLU PRO ALA LEU SEQRES 11 B 195 ALA ASN ILE HIS ARG ALA LEU GLY ALA ASP GLY ARG ALA SEQRES 12 B 195 VAL ILE GLY PHE GLY ALA GLY ARG GLY TRP VAL PHE GLY SEQRES 13 B 195 ASP PHE LEU GLU VAL ALA GLU ARG VAL GLY LEU GLU LEU SEQRES 14 B 195 GLU ASN ALA PHE GLU SER TRP ASP LEU LYS PRO PHE VAL SEQRES 15 B 195 GLN GLY SER GLU PHE LEU VAL ALA VAL PHE THR LYS LYS MODRES 3CGG MSE A 42 MET SELENOMETHIONINE MODRES 3CGG MSE A 117 MET SELENOMETHIONINE MODRES 3CGG MSE B 42 MET SELENOMETHIONINE MODRES 3CGG MSE B 117 MET SELENOMETHIONINE HET MSE A 42 8 HET MSE A 117 8 HET MSE B 42 8 HET MSE B 117 8 HET NHE A 195 13 HET NHE A 196 13 HET EDO A 197 4 HET EDO A 198 4 HET EDO A 199 4 HET EDO A 200 4 HET EDO A 201 4 HET CIT B 195 13 HET EDO B 196 4 HET EDO B 197 4 HET EDO B 198 4 HETNAM MSE SELENOMETHIONINE HETNAM NHE 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM CIT CITRIC ACID HETSYN NHE N-CYCLOHEXYLTAURINE; CHES HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 NHE 2(C8 H17 N O3 S) FORMUL 5 EDO 8(C2 H6 O2) FORMUL 10 CIT C6 H8 O7 FORMUL 14 HOH *274(H2 O) HELIX 1 1 ASN A 11 SER A 15 5 5 HELIX 2 2 ASN A 17 GLY A 29 1 13 HELIX 3 3 TYR A 33 ALA A 43 1 11 HELIX 4 4 GLY A 57 GLN A 66 1 10 HELIX 5 5 ASP A 76 PHE A 87 1 12 HELIX 6 6 VAL A 116 LEU A 120 5 5 HELIX 7 7 ALA A 121 ASP A 123 5 3 HELIX 8 8 GLY A 124 ALA A 135 1 12 HELIX 9 9 VAL A 153 GLY A 165 1 13 HELIX 10 10 PRO B 12 ALA B 28 1 17 HELIX 11 11 TYR B 33 ALA B 43 1 11 HELIX 12 12 GLY B 57 GLN B 66 1 10 HELIX 13 13 ASP B 76 PHE B 87 1 12 HELIX 14 14 ASN B 115 LEU B 120 1 6 HELIX 15 15 ALA B 121 ASP B 123 5 3 HELIX 16 16 GLY B 124 ALA B 135 1 12 HELIX 17 17 VAL B 153 GLY B 165 1 13 SHEET 1 A 7 ARG A 91 VAL A 94 0 SHEET 2 A 7 ASP A 69 ASP A 74 1 N GLY A 72 O ARG A 91 SHEET 3 A 7 LYS A 48 ALA A 52 1 N ILE A 49 O ASP A 69 SHEET 4 A 7 PHE A 107 SER A 112 1 O VAL A 111 N LEU A 50 SHEET 5 A 7 LEU A 136 GLY A 147 1 O VAL A 143 N ILE A 110 SHEET 6 A 7 PHE A 186 LYS A 193 -1 O PHE A 191 N ALA A 142 SHEET 7 A 7 LEU A 166 PHE A 172 -1 N GLU A 169 O VAL A 190 SHEET 1 B 7 ARG B 91 VAL B 94 0 SHEET 2 B 7 ASP B 69 ASP B 74 1 N GLY B 72 O VAL B 93 SHEET 3 B 7 LYS B 48 ALA B 52 1 N ASP B 51 O LEU B 71 SHEET 4 B 7 PHE B 107 SER B 112 1 O VAL B 111 N LEU B 50 SHEET 5 B 7 LEU B 136 GLY B 147 1 O GLY B 145 N SER B 112 SHEET 6 B 7 PHE B 186 LYS B 193 -1 O ALA B 189 N ILE B 144 SHEET 7 B 7 LEU B 166 PHE B 172 -1 N GLU B 169 O VAL B 190 LINK C ALA A 41 N MSE A 42 1555 1555 1.32 LINK C MSE A 42 N ALA A 43 1555 1555 1.33 LINK C VAL A 116 N MSE A 117 1555 1555 1.34 LINK C MSE A 117 N GLY A 118 1555 1555 1.33 LINK C ALA B 41 N MSE B 42 1555 1555 1.32 LINK C MSE B 42 N ALA B 43 1555 1555 1.33 LINK C VAL B 116 N MSE B 117 1555 1555 1.35 LINK C MSE B 117 N GLY B 118 1555 1555 1.34 CISPEP 1 ASN B 11 PRO B 12 0 12.76 SITE 1 AC1 8 GLY A 53 ASP A 74 LEU A 75 GLY A 95 SITE 2 AC1 8 ASP A 96 LEU A 97 SER A 112 ARG B 21 SITE 1 AC2 4 ALA A 19 TRP A 22 GLY A 155 LEU A 158 SITE 1 AC3 4 ASP A 9 TYR B 33 LYS B 65 ASP B 86 SITE 1 AC4 2 LEU A 120 ARG B 21 SITE 1 AC5 3 THR A 73 ASP A 100 GLN A 101 SITE 1 AC6 3 SER B 98 PRO B 127 ARG B 134 SITE 1 AC7 4 TYR A 62 GLN A 66 TYR B 62 GLN B 66 SITE 1 AC8 4 ILE A 102 SER A 103 GLU A 104 SER B 103 SITE 1 AC9 5 LYS A 178 ASP B 108 LEU B 109 ASP B 139 SITE 2 AC9 5 ARG B 141 SITE 1 BC1 4 TYR A 33 TYR A 62 LYS A 65 PHE A 87 SITE 1 BC2 5 SER A 103 GLN B 101 ILE B 102 SER B 103 SITE 2 BC2 5 GLU B 104 CRYST1 51.330 87.398 92.429 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019482 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011442 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010819 0.00000 MASTER 412 0 15 17 14 0 14 6 0 0 0 30 END