HEADER CELL ADHESION/BLOOD CLOTTING 23-DEC-10 3AT0 TITLE STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF CLFB:LIGAND TITLE 2 INTERACTIONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CLUMPING FACTOR B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N2 N3 DOMAIN (UNP RESIDUES 212-541); COMPND 5 SYNONYM: FIBRINOGEN RECEPTOR B, FIBRINOGEN-BINDING PROTEIN B; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: C-TERMINAL ALPHA CHAIN PEPTIDE; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: 16-MER FROM FIBRINOGEN ALPHA CHAIN, FIBRINOPEPTIDE A; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 158879; SOURCE 4 STRAIN: N315; SOURCE 5 GENE: CLFB, SA2423; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED. KEYWDS IGG LIKE, ADHESIN, FIBRINOGEN, CYTOKERATIN, CELL ADHESION-BLOOD KEYWDS 2 CLOTTING COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR V.K.GANESH REVDAT 1 04-MAY-11 3AT0 0 JRNL AUTH V.K.GANESH,E.M.BARBU,C.C.S.DEIVANAYAGAM,B.LE,A.ANDERSON, JRNL AUTH 2 Y.MATSUKA,S.L.LIN,T.J.FOSTER,S.V.L.NARAYANA,M.HOOK JRNL TITL STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF CLFB:LIGAND JRNL TITL 2 INTERACTIONS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.75 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 21307 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1096 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1453 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.2450 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.2620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2529 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 204 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.36000 REMARK 3 B22 (A**2) : -0.36000 REMARK 3 B33 (A**2) : 0.71000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.195 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.117 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.099 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2595 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3530 ; 1.550 ; 1.929 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 330 ; 6.023 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 126 ;36.424 ;26.429 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 410 ;13.220 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;15.870 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 398 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2005 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1131 ; 0.213 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1782 ; 0.318 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 213 ; 0.149 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 24 ; 0.224 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.062 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1670 ; 0.842 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2662 ; 1.532 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1041 ; 2.551 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 868 ; 4.015 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3AT0 COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-JAN-11. REMARK 100 THE RCSB ID CODE IS RCSB029659. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21349 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.9M SODIUM CITRATE, 90MM IMIDAZOLE PH REMARK 280 8.0, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.93200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.89800 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.96600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 204 REMARK 465 HIS A 205 REMARK 465 HIS A 206 REMARK 465 HIS A 207 REMARK 465 HIS A 208 REMARK 465 HIS A 209 REMARK 465 GLY A 210 REMARK 465 SER A 211 REMARK 465 ARG A 529 REMARK 465 TYR A 530 REMARK 465 GLY A 531 REMARK 465 GLY A 532 REMARK 465 GLY A 533 REMARK 465 SER A 534 REMARK 465 ALA A 535 REMARK 465 ASP A 536 REMARK 465 GLY A 537 REMARK 465 ASP A 538 REMARK 465 SER A 539 REMARK 465 ALA A 540 REMARK 465 VAL A 541 REMARK 465 GLY B 333 REMARK 465 SER B 334 REMARK 465 ASN B 347 REMARK 465 GLN B 348 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 249 CG OD1 OD2 REMARK 470 LYS A 250 CG CD CE NZ REMARK 470 LYS A 252 CG CD CE NZ REMARK 470 ASP A 415 CG OD1 OD2 REMARK 470 LYS A 463 CG CD CE NZ REMARK 470 ARG A 515 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 527 CG1 CG2 REMARK 470 VAL A 528 CG1 CG2 REMARK 470 TRP B 335 CB CG CD1 CD2 NE1 CE2 CE3 REMARK 470 TRP B 335 CZ2 CZ3 CH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 444 CG GLU A 444 CD -0.101 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 331 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 223 66.37 12.31 REMARK 500 ASN A 277 18.02 57.30 REMARK 500 ALA A 334 62.03 -118.03 REMARK 500 GLN A 414 -89.64 -105.98 REMARK 500 TYR A 468 69.78 -117.09 REMARK 500 ASN B 336 40.10 -173.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ASN A 223 20.0 L L OUTSIDE RANGE REMARK 500 ASN A 526 23.9 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ASW RELATED DB: PDB REMARK 900 THE SAME PROTEIN (CLFB) COMPLEXED WITH HUMAN CYTOKERATIN REMARK 900 (K10) DBREF 3AT0 A 212 541 UNP Q7A382 CLFB_STAAN 212 541 DBREF 3AT0 B 333 348 UNP P02671 FIBA_HUMAN 332 347 SEQADV 3AT0 HIS A 204 UNP Q7A382 EXPRESSION TAG SEQADV 3AT0 HIS A 205 UNP Q7A382 EXPRESSION TAG SEQADV 3AT0 HIS A 206 UNP Q7A382 EXPRESSION TAG SEQADV 3AT0 HIS A 207 UNP Q7A382 EXPRESSION TAG SEQADV 3AT0 HIS A 208 UNP Q7A382 EXPRESSION TAG SEQADV 3AT0 HIS A 209 UNP Q7A382 EXPRESSION TAG SEQADV 3AT0 GLY A 210 UNP Q7A382 EXPRESSION TAG SEQADV 3AT0 SER A 211 UNP Q7A382 EXPRESSION TAG SEQADV 3AT0 GLU A 444 UNP Q7A382 ASP 444 ENGINEERED MUTATION SEQRES 1 A 338 HIS HIS HIS HIS HIS HIS GLY SER GLY THR ASN VAL ASN SEQRES 2 A 338 ASP LYS VAL THR ALA SER ASN PHE LYS LEU GLU LYS THR SEQRES 3 A 338 THR PHE ASP PRO ASN GLN SER GLY ASN THR PHE MET ALA SEQRES 4 A 338 ALA ASN PHE THR VAL THR ASP LYS VAL LYS SER GLY ASP SEQRES 5 A 338 TYR PHE THR ALA LYS LEU PRO ASP SER LEU THR GLY ASN SEQRES 6 A 338 GLY ASP VAL ASP TYR SER ASN SER ASN ASN THR MET PRO SEQRES 7 A 338 ILE ALA ASP ILE LYS SER THR ASN GLY ASP VAL VAL ALA SEQRES 8 A 338 LYS ALA THR TYR ASP ILE LEU THR LYS THR TYR THR PHE SEQRES 9 A 338 VAL PHE THR ASP TYR VAL ASN ASN LYS GLU ASN ILE ASN SEQRES 10 A 338 GLY GLN PHE SER LEU PRO LEU PHE THR ASP ARG ALA LYS SEQRES 11 A 338 ALA PRO LYS SER GLY THR TYR ASP ALA ASN ILE ASN ILE SEQRES 12 A 338 ALA ASP GLU MET PHE ASN ASN LYS ILE THR TYR ASN TYR SEQRES 13 A 338 SER SER PRO ILE ALA GLY ILE ASP LYS PRO ASN GLY ALA SEQRES 14 A 338 ASN ILE SER SER GLN ILE ILE GLY VAL ASP THR ALA SER SEQRES 15 A 338 GLY GLN ASN THR TYR LYS GLN THR VAL PHE VAL ASN PRO SEQRES 16 A 338 LYS GLN ARG VAL LEU GLY ASN THR TRP VAL TYR ILE LYS SEQRES 17 A 338 GLY TYR GLN ASP LYS ILE GLU GLU SER SER GLY LYS VAL SEQRES 18 A 338 SER ALA THR ASP THR LYS LEU ARG ILE PHE GLU VAL ASN SEQRES 19 A 338 ASP THR SER LYS LEU SER GLU SER TYR TYR ALA ASP PRO SEQRES 20 A 338 ASN ASP SER ASN LEU LYS GLU VAL THR ASP GLN PHE LYS SEQRES 21 A 338 ASN ARG ILE TYR TYR GLU HIS PRO ASN VAL ALA SER ILE SEQRES 22 A 338 LYS PHE GLY ASP ILE THR LYS THR TYR VAL VAL LEU VAL SEQRES 23 A 338 GLU GLY HIS TYR ASP ASN THR GLY LYS ASN LEU LYS THR SEQRES 24 A 338 GLN VAL ILE GLN GLU ASN VAL ASP PRO VAL THR ASN ARG SEQRES 25 A 338 ASP TYR SER ILE PHE GLY TRP ASN ASN GLU ASN VAL VAL SEQRES 26 A 338 ARG TYR GLY GLY GLY SER ALA ASP GLY ASP SER ALA VAL SEQRES 1 B 16 GLY SER TRP ASN SER GLY SER SER GLY THR GLY SER THR SEQRES 2 B 16 GLY ASN GLN FORMUL 3 HOH *204(H2 O) HELIX 1 1 VAL A 215 ASP A 217 5 3 HELIX 2 2 ASP A 232 SER A 236 5 5 HELIX 3 3 ASP A 311 LYS A 316 5 6 HELIX 4 4 LYS A 416 SER A 420 5 5 HELIX 5 5 ASP A 438 LEU A 442 5 5 HELIX 6 6 THR A 459 LYS A 463 5 5 SHEET 1 A 4 VAL A 219 LEU A 226 0 SHEET 2 A 4 THR A 239 VAL A 247 -1 O THR A 246 N THR A 220 SHEET 3 A 4 ILE A 319 THR A 329 -1 O LEU A 325 N MET A 241 SHEET 4 A 4 LEU A 265 THR A 266 -1 N THR A 266 O PHE A 328 SHEET 1 B 9 VAL A 219 LEU A 226 0 SHEET 2 B 9 THR A 239 VAL A 247 -1 O THR A 246 N THR A 220 SHEET 3 B 9 ILE A 319 THR A 329 -1 O LEU A 325 N MET A 241 SHEET 4 B 9 THR A 279 SER A 287 -1 N LYS A 286 O GLN A 322 SHEET 5 B 9 VAL A 292 ASP A 299 -1 O TYR A 298 N MET A 280 SHEET 6 B 9 THR A 304 PHE A 309 -1 O THR A 304 N ASP A 299 SHEET 7 B 9 TYR A 256 LYS A 260 -1 N ALA A 259 O TYR A 305 SHEET 8 B 9 ILE A 344 ILE A 346 -1 O ASN A 345 N LYS A 260 SHEET 9 B 9 MET A 350 PHE A 351 -1 O PHE A 351 N ILE A 344 SHEET 1 C 3 THR A 230 PHE A 231 0 SHEET 2 C 3 LYS A 354 TYR A 357 1 O THR A 356 N PHE A 231 SHEET 3 C 3 GLY A 338 ASP A 341 -1 N TYR A 340 O ILE A 355 SHEET 1 D 4 ILE A 374 VAL A 381 0 SHEET 2 D 4 THR A 389 VAL A 396 -1 O PHE A 395 N SER A 375 SHEET 3 D 4 TYR A 485 TYR A 493 -1 O VAL A 489 N GLN A 392 SHEET 4 D 4 GLY A 422 LYS A 423 -1 N LYS A 423 O HIS A 492 SHEET 1 E 5 ILE A 374 VAL A 381 0 SHEET 2 E 5 THR A 389 VAL A 396 -1 O PHE A 395 N SER A 375 SHEET 3 E 5 TYR A 485 TYR A 493 -1 O VAL A 489 N GLN A 392 SHEET 4 E 5 LYS A 430 VAL A 436 -1 N ARG A 432 O LEU A 488 SHEET 5 E 5 LEU A 455 GLU A 457 -1 O LYS A 456 N GLU A 435 SHEET 1 F 6 ILE A 466 HIS A 470 0 SHEET 2 F 6 VAL A 473 ILE A 481 -1 O SER A 475 N TYR A 467 SHEET 3 F 6 LEU A 403 LYS A 411 -1 N VAL A 408 O ILE A 476 SHEET 4 F 6 LEU A 500 VAL A 509 -1 O GLN A 503 N LYS A 411 SHEET 5 F 6 SER A 518 ASN A 526 -1 O PHE A 520 N GLN A 506 SHEET 6 F 6 SER B 337 SER B 340 1 O SER B 337 N ASN A 523 CRYST1 86.238 86.238 83.864 90.00 90.00 90.00 P 43 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011596 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011596 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011924 0.00000 MASTER 366 0 0 6 31 0 0 6 0 0 0 28 END