HEADER STRUCTURAL PROTEIN 20-SEP-07 2Z9H TITLE ETHANOLAMINE UTILIZATION PROTEIN, EUTN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ETHANOLAMINE UTILIZATION PROTEIN EUTN; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: EUTN, CCHB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS HEXAMER, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.TANAKA,M.R.SAWAYA,T.O.YEATES REVDAT 4 11-OCT-17 2Z9H 1 REMARK REVDAT 3 13-JUL-11 2Z9H 1 VERSN REVDAT 2 24-FEB-09 2Z9H 1 VERSN REVDAT 1 02-OCT-07 2Z9H 0 JRNL AUTH S.TANAKA,M.R.SAWAYA,C.A.KERFELD,T.O.YEATES JRNL TITL THE CRYSTAL STRUCTURE OF ETHANOLAMINE UTILIZATION PROTEIN JRNL TITL 2 EUTN FROM E. COLI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 85.5 REMARK 3 NUMBER OF REFLECTIONS : 13732 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.246 REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.302 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 704 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.71 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.78 REMARK 3 REFLECTION IN BIN (WORKING SET) : 329 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 29.45 REMARK 3 BIN R VALUE (WORKING SET) : 0.3540 REMARK 3 BIN FREE R VALUE SET COUNT : 15 REMARK 3 BIN FREE R VALUE : 0.5830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4029 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 21 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.491 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.358 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 36.655 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.893 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4112 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2589 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5579 ; 0.950 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6437 ; 0.781 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 543 ; 5.347 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 150 ;39.860 ;26.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 692 ;17.528 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;20.406 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 683 ; 0.057 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4537 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 683 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 864 ; 0.187 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2728 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1954 ; 0.157 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2317 ; 0.082 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 116 ; 0.132 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 31 ; 0.143 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 26 ; 0.128 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.136 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3460 ; 1.615 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1145 ; 0.223 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4346 ; 1.847 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1511 ; 0.783 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1233 ; 1.098 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 3 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 3 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 29 3 REMARK 3 1 D 1 D 29 3 REMARK 3 2 A 39 A 85 3 REMARK 3 2 D 39 D 85 3 REMARK 3 3 A 92 A 95 3 REMARK 3 3 D 92 D 95 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 471 ; 0.020 ; 0.050 REMARK 3 LOOSE POSITIONAL 1 A (A): 504 ; 0.560 ; 5.000 REMARK 3 TIGHT THERMAL 1 A (A**2): 471 ; 0.040 ; 0.500 REMARK 3 LOOSE THERMAL 1 A (A**2): 504 ; 0.660 ;10.000 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : B E REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 1 B 95 3 REMARK 3 1 E 1 E 95 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 B (A): 555 ; 0.020 ; 0.050 REMARK 3 LOOSE POSITIONAL 2 B (A): 585 ; 0.600 ; 5.000 REMARK 3 TIGHT THERMAL 2 B (A**2): 555 ; 0.040 ; 0.500 REMARK 3 LOOSE THERMAL 2 B (A**2): 585 ; 0.570 ;10.000 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : C F REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 C 1 C 95 3 REMARK 3 1 F 1 F 95 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 3 C (A): 478 ; 0.020 ; 0.050 REMARK 3 LOOSE POSITIONAL 3 C (A): 495 ; 0.620 ; 5.000 REMARK 3 TIGHT THERMAL 3 C (A**2): 478 ; 0.040 ; 0.500 REMARK 3 LOOSE THERMAL 3 C (A**2): 495 ; 0.750 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 6 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 95 REMARK 3 RESIDUE RANGE : B 1 B 95 REMARK 3 RESIDUE RANGE : C 1 C 95 REMARK 3 RESIDUE RANGE : D 1 D 95 REMARK 3 RESIDUE RANGE : E 1 E 95 REMARK 3 RESIDUE RANGE : F 1 F 95 REMARK 3 ORIGIN FOR THE GROUP (A): -3.9432 6.3173 19.1309 REMARK 3 T TENSOR REMARK 3 T11: 0.2001 T22: 0.0999 REMARK 3 T33: 0.1913 T12: 0.0090 REMARK 3 T13: 0.0011 T23: -0.0051 REMARK 3 L TENSOR REMARK 3 L11: 1.1528 L22: 0.0088 REMARK 3 L33: 1.6895 L12: 0.0885 REMARK 3 L13: -0.2668 L23: 0.0372 REMARK 3 S TENSOR REMARK 3 S11: -0.0354 S12: -0.4181 S13: -0.0168 REMARK 3 S21: 0.0240 S22: 0.0020 S23: 0.0057 REMARK 3 S31: 0.0300 S32: 0.0083 S33: 0.0334 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2Z9H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-SEP-07. REMARK 100 THE DEPOSITION ID IS D_1000027689. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-D REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15586 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 80.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 2.400 REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.49400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2HD3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS, 0.2M AMMONIUM ACETATE, REMARK 280 50% MPD, PH5.3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.27000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12000 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 97 REMARK 465 HIS A 98 REMARK 465 HIS A 99 REMARK 465 HIS A 100 REMARK 465 HIS A 101 REMARK 465 HIS A 102 REMARK 465 HIS A 103 REMARK 465 HIS B 98 REMARK 465 HIS B 99 REMARK 465 HIS B 100 REMARK 465 HIS B 101 REMARK 465 HIS B 102 REMARK 465 HIS B 103 REMARK 465 SER C 61 REMARK 465 SER C 62 REMARK 465 ALA C 63 REMARK 465 ARG C 64 REMARK 465 GLN C 65 REMARK 465 ALA C 66 REMARK 465 HIS C 67 REMARK 465 LYS C 68 REMARK 465 SER C 69 REMARK 465 GLU C 70 REMARK 465 THR C 71 REMARK 465 SER C 72 REMARK 465 LEU C 96 REMARK 465 GLU C 97 REMARK 465 HIS C 98 REMARK 465 HIS C 99 REMARK 465 HIS C 100 REMARK 465 HIS C 101 REMARK 465 HIS C 102 REMARK 465 HIS C 103 REMARK 465 GLU D 97 REMARK 465 HIS D 98 REMARK 465 HIS D 99 REMARK 465 HIS D 100 REMARK 465 HIS D 101 REMARK 465 HIS D 102 REMARK 465 HIS D 103 REMARK 465 HIS E 98 REMARK 465 HIS E 99 REMARK 465 HIS E 100 REMARK 465 HIS E 101 REMARK 465 HIS E 102 REMARK 465 HIS E 103 REMARK 465 SER F 61 REMARK 465 SER F 62 REMARK 465 ALA F 63 REMARK 465 ARG F 64 REMARK 465 GLN F 65 REMARK 465 ALA F 66 REMARK 465 HIS F 67 REMARK 465 LYS F 68 REMARK 465 SER F 69 REMARK 465 GLU F 70 REMARK 465 THR F 71 REMARK 465 SER F 72 REMARK 465 PRO F 73 REMARK 465 LEU F 96 REMARK 465 GLU F 97 REMARK 465 HIS F 98 REMARK 465 HIS F 99 REMARK 465 HIS F 100 REMARK 465 HIS F 101 REMARK 465 HIS F 102 REMARK 465 HIS F 103 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 20 -120.71 55.96 REMARK 500 GLN A 39 116.63 -36.25 REMARK 500 LYS A 68 -65.34 -158.03 REMARK 500 PRO A 73 58.56 -91.51 REMARK 500 LEU A 76 119.66 -169.83 REMARK 500 ALA B 20 -139.19 60.16 REMARK 500 LYS B 68 -68.24 -158.63 REMARK 500 SER B 69 -169.23 -168.39 REMARK 500 PRO C 32 -35.10 -34.13 REMARK 500 GLN C 39 100.85 -50.72 REMARK 500 VAL C 74 -74.24 -159.62 REMARK 500 ASP C 75 -83.32 -140.89 REMARK 500 SER C 87 -136.50 -108.00 REMARK 500 ALA D 20 -120.98 56.65 REMARK 500 LYS D 68 -65.91 -158.70 REMARK 500 SER D 87 -114.53 -88.66 REMARK 500 VAL D 91 108.90 -54.07 REMARK 500 ALA E 20 -139.63 59.68 REMARK 500 LYS E 68 -67.26 -159.21 REMARK 500 SER E 69 -167.06 -168.44 REMARK 500 LEU E 96 56.56 -91.96 REMARK 500 GLN F 39 101.70 -51.38 REMARK 500 ASP F 75 -82.44 -140.12 REMARK 500 SER F 87 -134.92 -108.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL D 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD F 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 106 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2HD3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ETHANOLAMINE UTILIZATION PROTEIN EUTN FROM REMARK 900 ESCHERICHIA COLI, NESG TARGET ER316 REMARK 900 RELATED ID: 2QW7 RELATED DB: PDB REMARK 900 CARBOXYSOME SHELL SUBUNIT, CCML DBREF 2Z9H A 1 95 UNP P0AEJ8 EUTN_ECOLI 1 95 DBREF 2Z9H B 1 95 UNP P0AEJ8 EUTN_ECOLI 1 95 DBREF 2Z9H C 1 95 UNP P0AEJ8 EUTN_ECOLI 1 95 DBREF 2Z9H D 1 95 UNP P0AEJ8 EUTN_ECOLI 1 95 DBREF 2Z9H E 1 95 UNP P0AEJ8 EUTN_ECOLI 1 95 DBREF 2Z9H F 1 95 UNP P0AEJ8 EUTN_ECOLI 1 95 SEQADV 2Z9H LEU A 96 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H GLU A 97 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS A 98 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS A 99 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS A 100 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS A 101 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS A 102 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS A 103 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H LEU B 96 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H GLU B 97 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS B 98 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS B 99 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS B 100 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS B 101 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS B 102 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS B 103 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H LEU C 96 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H GLU C 97 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS C 98 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS C 99 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS C 100 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS C 101 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS C 102 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS C 103 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H LEU D 96 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H GLU D 97 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS D 98 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS D 99 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS D 100 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS D 101 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS D 102 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS D 103 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H LEU E 96 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H GLU E 97 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS E 98 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS E 99 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS E 100 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS E 101 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS E 102 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS E 103 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H LEU F 96 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H GLU F 97 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS F 98 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS F 99 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS F 100 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS F 101 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS F 102 UNP P0AEJ8 EXPRESSION TAG SEQADV 2Z9H HIS F 103 UNP P0AEJ8 EXPRESSION TAG SEQRES 1 A 103 MET LYS LEU ALA VAL VAL THR GLY GLN ILE VAL CYS THR SEQRES 2 A 103 VAL ARG HIS HIS GLY LEU ALA HIS ASP LYS LEU LEU MET SEQRES 3 A 103 VAL GLU MET ILE ASP PRO GLN GLY ASN PRO ASP GLY GLN SEQRES 4 A 103 CYS ALA VAL ALA ILE ASP ASN ILE GLY ALA GLY THR GLY SEQRES 5 A 103 GLU TRP VAL LEU LEU VAL SER GLY SER SER ALA ARG GLN SEQRES 6 A 103 ALA HIS LYS SER GLU THR SER PRO VAL ASP LEU CYS VAL SEQRES 7 A 103 ILE GLY ILE VAL ASP GLU VAL VAL SER GLY GLY GLN VAL SEQRES 8 A 103 ILE PHE HIS LYS LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 103 MET LYS LEU ALA VAL VAL THR GLY GLN ILE VAL CYS THR SEQRES 2 B 103 VAL ARG HIS HIS GLY LEU ALA HIS ASP LYS LEU LEU MET SEQRES 3 B 103 VAL GLU MET ILE ASP PRO GLN GLY ASN PRO ASP GLY GLN SEQRES 4 B 103 CYS ALA VAL ALA ILE ASP ASN ILE GLY ALA GLY THR GLY SEQRES 5 B 103 GLU TRP VAL LEU LEU VAL SER GLY SER SER ALA ARG GLN SEQRES 6 B 103 ALA HIS LYS SER GLU THR SER PRO VAL ASP LEU CYS VAL SEQRES 7 B 103 ILE GLY ILE VAL ASP GLU VAL VAL SER GLY GLY GLN VAL SEQRES 8 B 103 ILE PHE HIS LYS LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 103 MET LYS LEU ALA VAL VAL THR GLY GLN ILE VAL CYS THR SEQRES 2 C 103 VAL ARG HIS HIS GLY LEU ALA HIS ASP LYS LEU LEU MET SEQRES 3 C 103 VAL GLU MET ILE ASP PRO GLN GLY ASN PRO ASP GLY GLN SEQRES 4 C 103 CYS ALA VAL ALA ILE ASP ASN ILE GLY ALA GLY THR GLY SEQRES 5 C 103 GLU TRP VAL LEU LEU VAL SER GLY SER SER ALA ARG GLN SEQRES 6 C 103 ALA HIS LYS SER GLU THR SER PRO VAL ASP LEU CYS VAL SEQRES 7 C 103 ILE GLY ILE VAL ASP GLU VAL VAL SER GLY GLY GLN VAL SEQRES 8 C 103 ILE PHE HIS LYS LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 D 103 MET LYS LEU ALA VAL VAL THR GLY GLN ILE VAL CYS THR SEQRES 2 D 103 VAL ARG HIS HIS GLY LEU ALA HIS ASP LYS LEU LEU MET SEQRES 3 D 103 VAL GLU MET ILE ASP PRO GLN GLY ASN PRO ASP GLY GLN SEQRES 4 D 103 CYS ALA VAL ALA ILE ASP ASN ILE GLY ALA GLY THR GLY SEQRES 5 D 103 GLU TRP VAL LEU LEU VAL SER GLY SER SER ALA ARG GLN SEQRES 6 D 103 ALA HIS LYS SER GLU THR SER PRO VAL ASP LEU CYS VAL SEQRES 7 D 103 ILE GLY ILE VAL ASP GLU VAL VAL SER GLY GLY GLN VAL SEQRES 8 D 103 ILE PHE HIS LYS LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 E 103 MET LYS LEU ALA VAL VAL THR GLY GLN ILE VAL CYS THR SEQRES 2 E 103 VAL ARG HIS HIS GLY LEU ALA HIS ASP LYS LEU LEU MET SEQRES 3 E 103 VAL GLU MET ILE ASP PRO GLN GLY ASN PRO ASP GLY GLN SEQRES 4 E 103 CYS ALA VAL ALA ILE ASP ASN ILE GLY ALA GLY THR GLY SEQRES 5 E 103 GLU TRP VAL LEU LEU VAL SER GLY SER SER ALA ARG GLN SEQRES 6 E 103 ALA HIS LYS SER GLU THR SER PRO VAL ASP LEU CYS VAL SEQRES 7 E 103 ILE GLY ILE VAL ASP GLU VAL VAL SER GLY GLY GLN VAL SEQRES 8 E 103 ILE PHE HIS LYS LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 F 103 MET LYS LEU ALA VAL VAL THR GLY GLN ILE VAL CYS THR SEQRES 2 F 103 VAL ARG HIS HIS GLY LEU ALA HIS ASP LYS LEU LEU MET SEQRES 3 F 103 VAL GLU MET ILE ASP PRO GLN GLY ASN PRO ASP GLY GLN SEQRES 4 F 103 CYS ALA VAL ALA ILE ASP ASN ILE GLY ALA GLY THR GLY SEQRES 5 F 103 GLU TRP VAL LEU LEU VAL SER GLY SER SER ALA ARG GLN SEQRES 6 F 103 ALA HIS LYS SER GLU THR SER PRO VAL ASP LEU CYS VAL SEQRES 7 F 103 ILE GLY ILE VAL ASP GLU VAL VAL SER GLY GLY GLN VAL SEQRES 8 F 103 ILE PHE HIS LYS LEU GLU HIS HIS HIS HIS HIS HIS HET MRD A 104 8 HET MRD A 105 8 HET MRD A 106 8 HET CL D 104 1 HET MRD F 104 8 HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL HETNAM CL CHLORIDE ION FORMUL 7 MRD 4(C6 H14 O2) FORMUL 10 CL CL 1- FORMUL 12 HOH *21(H2 O) HELIX 1 1 HIS A 16 ALA A 20 5 5 HELIX 2 2 GLY A 60 LYS A 68 1 9 HELIX 3 3 HIS B 16 ALA B 20 5 5 HELIX 4 4 GLY B 60 LYS B 68 1 9 HELIX 5 5 HIS D 16 ALA D 20 5 5 HELIX 6 6 GLY D 60 LYS D 68 1 9 HELIX 7 7 HIS E 17 ALA E 20 5 4 HELIX 8 8 GLY E 60 LYS E 68 1 9 HELIX 9 9 HIS F 16 ALA F 20 5 5 SHEET 1 A 8 VAL B 91 HIS B 94 0 SHEET 2 A 8 GLU B 84 SER B 87 -1 N VAL B 85 O ILE B 92 SHEET 3 A 8 LYS A 2 VAL A 11 -1 N GLN A 9 O VAL B 86 SHEET 4 A 8 TRP A 54 SER A 59 -1 O VAL A 55 N ALA A 4 SHEET 5 A 8 LEU A 76 ILE A 81 -1 O CYS A 77 N VAL A 58 SHEET 6 A 8 PRO A 36 ASP A 45 1 N ILE A 44 O VAL A 78 SHEET 7 A 8 LYS A 23 ILE A 30 -1 N VAL A 27 O ALA A 41 SHEET 8 A 8 LYS A 2 VAL A 11 -1 N ILE A 10 O LEU A 24 SHEET 1 B 7 VAL A 91 HIS A 94 0 SHEET 2 B 7 GLU A 84 VAL A 86 -1 N VAL A 85 O PHE A 93 SHEET 3 B 7 LYS F 2 VAL F 11 -1 O VAL F 11 N GLU A 84 SHEET 4 B 7 LYS F 23 ILE F 30 -1 O GLU F 28 N VAL F 5 SHEET 5 B 7 PRO F 36 ASP F 45 -1 O ASP F 37 N MET F 29 SHEET 6 B 7 LEU F 76 ILE F 81 1 O LEU F 76 N ILE F 44 SHEET 7 B 7 VAL E 14 ARG E 15 -1 N VAL E 14 O ILE F 81 SHEET 1 C 6 VAL A 91 HIS A 94 0 SHEET 2 C 6 GLU A 84 VAL A 86 -1 N VAL A 85 O PHE A 93 SHEET 3 C 6 LYS F 2 VAL F 11 -1 O VAL F 11 N GLU A 84 SHEET 4 C 6 TRP F 54 SER F 59 -1 O LEU F 57 N LYS F 2 SHEET 5 C 6 LEU F 76 ILE F 81 -1 O ILE F 79 N LEU F 56 SHEET 6 C 6 VAL E 14 ARG E 15 -1 N VAL E 14 O ILE F 81 SHEET 1 D 8 VAL C 91 HIS C 94 0 SHEET 2 D 8 GLU C 84 VAL C 86 -1 N VAL C 85 O PHE C 93 SHEET 3 D 8 LYS B 2 VAL B 11 -1 N GLN B 9 O VAL C 86 SHEET 4 D 8 TRP B 54 SER B 59 -1 O LEU B 57 N LYS B 2 SHEET 5 D 8 LEU B 76 ILE B 81 -1 O ILE B 79 N LEU B 56 SHEET 6 D 8 PRO B 36 ASP B 45 1 N ILE B 44 O VAL B 78 SHEET 7 D 8 LYS B 23 ILE B 30 -1 N VAL B 27 O ALA B 41 SHEET 8 D 8 LYS B 2 VAL B 11 -1 N VAL B 5 O GLU B 28 SHEET 1 E 8 VAL D 91 HIS D 94 0 SHEET 2 E 8 GLU D 84 VAL D 86 -1 N VAL D 85 O PHE D 93 SHEET 3 E 8 LYS C 2 VAL C 11 -1 N VAL C 11 O GLU D 84 SHEET 4 E 8 TRP C 54 SER C 59 -1 O LEU C 57 N LYS C 2 SHEET 5 E 8 LEU C 76 ILE C 81 -1 O ILE C 79 N LEU C 56 SHEET 6 E 8 PRO C 36 ASP C 45 1 N ILE C 44 O LEU C 76 SHEET 7 E 8 LYS C 23 ILE C 30 -1 N MET C 29 O ASP C 37 SHEET 8 E 8 LYS C 2 VAL C 11 -1 N VAL C 5 O GLU C 28 SHEET 1 F 8 VAL E 91 HIS E 94 0 SHEET 2 F 8 GLU E 84 SER E 87 -1 N VAL E 85 O ILE E 92 SHEET 3 F 8 LYS D 2 VAL D 11 -1 N GLN D 9 O VAL E 86 SHEET 4 F 8 TRP D 54 SER D 59 -1 O VAL D 55 N ALA D 4 SHEET 5 F 8 LEU D 76 ILE D 81 -1 O CYS D 77 N VAL D 58 SHEET 6 F 8 PRO D 36 ASP D 45 1 N ILE D 44 O VAL D 78 SHEET 7 F 8 LYS D 23 ILE D 30 -1 N VAL D 27 O ALA D 41 SHEET 8 F 8 LYS D 2 VAL D 11 -1 N ILE D 10 O LEU D 24 SHEET 1 G 8 VAL F 91 HIS F 94 0 SHEET 2 G 8 GLU F 84 VAL F 86 -1 N VAL F 85 O PHE F 93 SHEET 3 G 8 LYS E 2 VAL E 11 -1 N VAL E 11 O GLU F 84 SHEET 4 G 8 TRP E 54 SER E 59 -1 O LEU E 57 N LYS E 2 SHEET 5 G 8 LEU E 76 ILE E 81 -1 O ILE E 79 N LEU E 56 SHEET 6 G 8 PRO E 36 ASP E 45 1 N ILE E 44 O VAL E 78 SHEET 7 G 8 LYS E 23 ILE E 30 -1 N VAL E 27 O ALA E 41 SHEET 8 G 8 LYS E 2 VAL E 11 -1 N VAL E 5 O GLU E 28 CISPEP 1 PRO D 32 GLN D 33 0 -0.82 SITE 1 AC1 3 MET D 1 LYS D 2 SER D 59 SITE 1 AC2 5 GLN A 9 ASP E 83 GLU E 84 HIS E 94 SITE 2 AC2 5 LEU E 96 SITE 1 AC3 5 MET E 26 CYS E 40 LEU F 3 ILE F 30 SITE 2 AC3 5 PRO F 32 SITE 1 AC4 3 THR A 51 GLY B 89 LEU E 96 SITE 1 AC5 5 GLY A 88 LYS D 95 LEU D 96 GLN F 9 SITE 2 AC5 5 THR F 51 CRYST1 71.281 66.540 72.004 90.00 119.25 90.00 P 1 21 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014029 0.000000 0.007858 0.00000 SCALE2 0.000000 0.015029 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015918 0.00000 MASTER 435 0 5 9 53 0 8 6 0 0 0 48 END