HEADER SIGNALING PROTEIN ACTIVATOR 18-JUN-07 2Z4I TITLE CRYSTAL STRUCTURE OF THE CPX PATHWAY ACTIVATOR NLPE FROM TITLE 2 ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: COPPER HOMEOSTASIS PROTEIN CUTF; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LIPOPROTEIN NLPE; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: NLPE; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PKT-MNLPE KEYWDS OUTER MEMBLANE LIPOPROTEIN, BETA BARREL, OB-FOLD, 3D DOMAIN KEYWDS 2 SWAPPING, SIGNALING PROTEIN ACTIVATOR EXPDTA X-RAY DIFFRACTION AUTHOR Y.HIRANO,M.M.HOSSAIN,K.TAKEDA,H.TOKUDA,K.MIKI REVDAT 2 24-FEB-09 2Z4I 1 VERSN REVDAT 1 04-SEP-07 2Z4I 0 JRNL AUTH Y.HIRANO,M.M.HOSSAIN,K.TAKEDA,H.TOKUDA,K.MIKI JRNL TITL STRUCTURAL STUDIES OF THE CPX PATHWAY ACTIVATOR JRNL TITL 2 NLPE ON THE OUTER MEMBRANE OF ESCHERICHIA COLI JRNL REF STRUCTURE V. 15 963 2007 JRNL REFN ISSN 0969-2126 JRNL PMID 17698001 JRNL DOI 10.1016/J.STR.2007.06.014 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2227445.400 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 89.4 REMARK 3 NUMBER OF REFLECTIONS : 33171 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1584 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.76 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 69.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4082 REMARK 3 BIN R VALUE (WORKING SET) : 0.3400 REMARK 3 BIN FREE R VALUE : 0.3830 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 217 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.026 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2866 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 24 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -8.93000 REMARK 3 B22 (A**2) : -8.93000 REMARK 3 B33 (A**2) : 17.87000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM SIGMAA (A) : 0.56 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.42 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.62 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.40 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.70 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.570 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.820 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.290 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.450 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 37.37 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : LIGAND.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : LIGAND.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE FACTOR FILE CONTAINS REMARK 3 FRIEDEL PAIRS. REMARK 4 REMARK 4 2Z4I COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JUN-07. REMARK 100 THE RCSB ID CODE IS RCSB027510. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-OCT-05; NULL REMARK 200 TEMPERATURE (KELVIN) : 95; 95 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SPRING-8; SPRING-8 REMARK 200 BEAMLINE : BL44B2; BL44B2 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000; 0.9792, 0.9797, REMARK 200 0.9700, 0.9900 REMARK 200 MONOCHROMATOR : SI 111; SI 111 REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210; ADSC REMARK 200 QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33952 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 200 DATA REDUNDANCY : 8.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06400 REMARK 200 FOR THE DATA SET : 24.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.28700 REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG 8000, 0.05M SODIUM CITRATE, REMARK 280 0.07M ZINC SULFATE, 40% D-SORBITOL, PH 4.2, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.22800 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 60.71100 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 60.71100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 63.34200 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 60.71100 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 60.71100 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 21.11400 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 60.71100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.71100 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 63.34200 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 60.71100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.71100 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 21.11400 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 42.22800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A MONOMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 ASN A 2 REMARK 465 ASN A 3 REMARK 465 ARG A 4 REMARK 465 ALA A 5 REMARK 465 GLU A 6 REMARK 465 VAL A 7 REMARK 465 ASP A 8 REMARK 465 THR A 9 REMARK 465 LEU A 10 REMARK 465 SER A 11 REMARK 465 PRO A 12 REMARK 465 ALA A 13 REMARK 465 GLN A 14 REMARK 465 ALA A 15 REMARK 465 ALA A 16 REMARK 465 GLU A 17 REMARK 465 LEU A 18 REMARK 465 LYS A 19 REMARK 465 PRO A 188 REMARK 465 ASP A 189 REMARK 465 THR A 190 REMARK 465 GLY A 191 REMARK 465 ALA A 192 REMARK 465 GLY A 215 REMARK 465 GLN A 216 REMARK 465 MSE A 217 REMARK 465 ALA A 218 REMARK 465 SER A 219 REMARK 465 MSE A 220 REMARK 465 THR A 221 REMARK 465 GLY A 222 REMARK 465 GLY A 223 REMARK 465 GLN A 224 REMARK 465 GLN A 225 REMARK 465 MSE A 226 REMARK 465 GLY A 227 REMARK 465 HIS A 228 REMARK 465 HIS A 229 REMARK 465 HIS A 230 REMARK 465 HIS A 231 REMARK 465 HIS A 232 REMARK 465 HIS A 233 REMARK 465 ALA B 1 REMARK 465 ASN B 2 REMARK 465 ASN B 3 REMARK 465 ARG B 4 REMARK 465 ALA B 5 REMARK 465 GLU B 6 REMARK 465 VAL B 7 REMARK 465 ASP B 8 REMARK 465 THR B 9 REMARK 465 LEU B 10 REMARK 465 SER B 11 REMARK 465 PRO B 12 REMARK 465 ALA B 13 REMARK 465 GLN B 14 REMARK 465 ALA B 15 REMARK 465 ALA B 16 REMARK 465 GLU B 17 REMARK 465 LEU B 18 REMARK 465 LYS B 19 REMARK 465 PRO B 20 REMARK 465 GLY B 215 REMARK 465 GLN B 216 REMARK 465 MSE B 217 REMARK 465 ALA B 218 REMARK 465 SER B 219 REMARK 465 MSE B 220 REMARK 465 THR B 221 REMARK 465 GLY B 222 REMARK 465 GLY B 223 REMARK 465 GLN B 224 REMARK 465 GLN B 225 REMARK 465 MSE B 226 REMARK 465 GLY B 227 REMARK 465 HIS B 228 REMARK 465 HIS B 229 REMARK 465 HIS B 230 REMARK 465 HIS B 231 REMARK 465 HIS B 232 REMARK 465 HIS B 233 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 20 CG CD REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 ARG A 59 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 60 CG CD OE1 OE2 REMARK 470 GLU A 61 CG CD OE1 OE2 REMARK 470 LYS A 93 CG CD CE NZ REMARK 470 GLU A 116 CG CD OE1 OE2 REMARK 470 HIS A 169 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 171 CG CD OE1 OE2 REMARK 470 LYS A 172 CG CD CE NZ REMARK 470 LYS A 204 CG CD CE NZ REMARK 470 ASN A 208 CG OD1 ND2 REMARK 470 GLN B 23 CG CD OE1 NE2 REMARK 470 LYS B 45 CG CD CE NZ REMARK 470 GLU B 61 CG CD OE1 OE2 REMARK 470 ARG B 73 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 76 CG OD1 OD2 REMARK 470 LYS B 77 CG CD CE NZ REMARK 470 LYS B 84 CG CD CE NZ REMARK 470 GLU B 86 CG CD OE1 OE2 REMARK 470 ARG B 91 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 93 CG CD CE NZ REMARK 470 GLU B 158 CG CD OE1 OE2 REMARK 470 GLU B 171 CG CD OE1 OE2 REMARK 470 LYS B 172 CG CD CE NZ REMARK 470 LYS B 204 CG CD CE NZ REMARK 470 GLN B 209 CG CD OE1 NE2 REMARK 470 LEU B 214 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 GLN A 209 NE2 GLN A 209 8554 1.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 46 32.43 -83.77 REMARK 500 THR A 74 -148.52 -86.45 REMARK 500 ALA A 75 -81.81 -50.40 REMARK 500 SER A 170 148.26 -173.34 REMARK 500 GLU A 171 59.61 -103.94 REMARK 500 SER A 213 171.94 -49.68 REMARK 500 ASP B 46 15.47 -67.83 REMARK 500 GLU B 60 105.33 -52.45 REMARK 500 THR B 74 -118.47 -61.50 REMARK 500 ALA B 75 -128.15 -73.18 REMARK 500 LYS B 93 94.55 -179.39 REMARK 500 ARG B 102 -48.84 157.87 REMARK 500 SER B 120 100.56 -45.76 REMARK 500 SER B 121 135.59 162.24 REMARK 500 PRO B 173 161.03 -49.48 REMARK 500 ASN B 208 34.50 -84.65 REMARK 500 SER B 213 30.80 -70.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Z4H RELATED DB: PDB REMARK 900 THE UNLABELED PROTEIN DBREF 2Z4I A 1 216 UNP P40710 CUTF_ECOLI 21 236 DBREF 2Z4I B 1 216 UNP P40710 CUTF_ECOLI 21 236 SEQADV 2Z4I ALA A 1 UNP P40710 CYS 21 ENGINEERED SEQADV 2Z4I MSE A 21 UNP P40710 MET 41 MODIFIED RESIDUE SEQADV 2Z4I MSE A 51 UNP P40710 MET 71 MODIFIED RESIDUE SEQADV 2Z4I MSE A 99 UNP P40710 MET 119 MODIFIED RESIDUE SEQADV 2Z4I MSE A 124 UNP P40710 MET 144 MODIFIED RESIDUE SEQADV 2Z4I MSE A 127 UNP P40710 MET 147 MODIFIED RESIDUE SEQADV 2Z4I MSE A 132 UNP P40710 MET 152 MODIFIED RESIDUE SEQADV 2Z4I MSE A 136 UNP P40710 MET 156 MODIFIED RESIDUE SEQADV 2Z4I MSE A 152 UNP P40710 MET 172 MODIFIED RESIDUE SEQADV 2Z4I MSE A 217 UNP P40710 EXPRESSION TAG SEQADV 2Z4I ALA A 218 UNP P40710 EXPRESSION TAG SEQADV 2Z4I SER A 219 UNP P40710 EXPRESSION TAG SEQADV 2Z4I MSE A 220 UNP P40710 EXPRESSION TAG SEQADV 2Z4I THR A 221 UNP P40710 EXPRESSION TAG SEQADV 2Z4I GLY A 222 UNP P40710 EXPRESSION TAG SEQADV 2Z4I GLY A 223 UNP P40710 EXPRESSION TAG SEQADV 2Z4I GLN A 224 UNP P40710 EXPRESSION TAG SEQADV 2Z4I GLN A 225 UNP P40710 EXPRESSION TAG SEQADV 2Z4I MSE A 226 UNP P40710 EXPRESSION TAG SEQADV 2Z4I GLY A 227 UNP P40710 EXPRESSION TAG SEQADV 2Z4I HIS A 228 UNP P40710 EXPRESSION TAG SEQADV 2Z4I HIS A 229 UNP P40710 EXPRESSION TAG SEQADV 2Z4I HIS A 230 UNP P40710 EXPRESSION TAG SEQADV 2Z4I HIS A 231 UNP P40710 EXPRESSION TAG SEQADV 2Z4I HIS A 232 UNP P40710 EXPRESSION TAG SEQADV 2Z4I HIS A 233 UNP P40710 EXPRESSION TAG SEQADV 2Z4I ALA B 1 UNP P40710 CYS 21 ENGINEERED SEQADV 2Z4I MSE B 21 UNP P40710 MET 41 MODIFIED RESIDUE SEQADV 2Z4I MSE B 51 UNP P40710 MET 71 MODIFIED RESIDUE SEQADV 2Z4I MSE B 99 UNP P40710 MET 119 MODIFIED RESIDUE SEQADV 2Z4I MSE B 124 UNP P40710 MET 144 MODIFIED RESIDUE SEQADV 2Z4I MSE B 127 UNP P40710 MET 147 MODIFIED RESIDUE SEQADV 2Z4I MSE B 132 UNP P40710 MET 152 MODIFIED RESIDUE SEQADV 2Z4I MSE B 136 UNP P40710 MET 156 MODIFIED RESIDUE SEQADV 2Z4I MSE B 152 UNP P40710 MET 172 MODIFIED RESIDUE SEQADV 2Z4I MSE B 217 UNP P40710 EXPRESSION TAG SEQADV 2Z4I ALA B 218 UNP P40710 EXPRESSION TAG SEQADV 2Z4I SER B 219 UNP P40710 EXPRESSION TAG SEQADV 2Z4I MSE B 220 UNP P40710 EXPRESSION TAG SEQADV 2Z4I THR B 221 UNP P40710 EXPRESSION TAG SEQADV 2Z4I GLY B 222 UNP P40710 EXPRESSION TAG SEQADV 2Z4I GLY B 223 UNP P40710 EXPRESSION TAG SEQADV 2Z4I GLN B 224 UNP P40710 EXPRESSION TAG SEQADV 2Z4I GLN B 225 UNP P40710 EXPRESSION TAG SEQADV 2Z4I MSE B 226 UNP P40710 EXPRESSION TAG SEQADV 2Z4I GLY B 227 UNP P40710 EXPRESSION TAG SEQADV 2Z4I HIS B 228 UNP P40710 EXPRESSION TAG SEQADV 2Z4I HIS B 229 UNP P40710 EXPRESSION TAG SEQADV 2Z4I HIS B 230 UNP P40710 EXPRESSION TAG SEQADV 2Z4I HIS B 231 UNP P40710 EXPRESSION TAG SEQADV 2Z4I HIS B 232 UNP P40710 EXPRESSION TAG SEQADV 2Z4I HIS B 233 UNP P40710 EXPRESSION TAG SEQRES 1 A 233 ALA ASN ASN ARG ALA GLU VAL ASP THR LEU SER PRO ALA SEQRES 2 A 233 GLN ALA ALA GLU LEU LYS PRO MSE PRO GLN SER TRP ARG SEQRES 3 A 233 GLY VAL LEU PRO CYS ALA ASP CYS GLU GLY ILE GLU THR SEQRES 4 A 233 SER LEU PHE LEU GLU LYS ASP GLY THR TRP VAL MSE ASN SEQRES 5 A 233 GLU ARG TYR LEU GLY ALA ARG GLU GLU PRO SER SER PHE SEQRES 6 A 233 ALA SER TYR GLY THR TRP ALA ARG THR ALA ASP LYS LEU SEQRES 7 A 233 VAL LEU THR ASP SER LYS GLY GLU LYS SER TYR TYR ARG SEQRES 8 A 233 ALA LYS GLY ASP ALA LEU GLU MSE LEU ASP ARG GLU GLY SEQRES 9 A 233 ASN PRO ILE GLU SER GLN PHE ASN TYR THR LEU GLU ALA SEQRES 10 A 233 ALA GLN SER SER LEU PRO MSE THR PRO MSE THR LEU ARG SEQRES 11 A 233 GLY MSE TYR PHE TYR MSE ALA ASP ALA ALA THR PHE THR SEQRES 12 A 233 ASP CYS ALA THR GLY LYS ARG PHE MSE VAL ALA ASN ASN SEQRES 13 A 233 ALA GLU LEU GLU ARG SER TYR LEU ALA ALA ARG GLY HIS SEQRES 14 A 233 SER GLU LYS PRO VAL LEU LEU SER VAL GLU GLY HIS PHE SEQRES 15 A 233 THR LEU GLU GLY ASN PRO ASP THR GLY ALA PRO THR LYS SEQRES 16 A 233 VAL LEU ALA PRO ASP THR ALA GLY LYS PHE TYR PRO ASN SEQRES 17 A 233 GLN ASP CYS SER SER LEU GLY GLN MSE ALA SER MSE THR SEQRES 18 A 233 GLY GLY GLN GLN MSE GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 233 ALA ASN ASN ARG ALA GLU VAL ASP THR LEU SER PRO ALA SEQRES 2 B 233 GLN ALA ALA GLU LEU LYS PRO MSE PRO GLN SER TRP ARG SEQRES 3 B 233 GLY VAL LEU PRO CYS ALA ASP CYS GLU GLY ILE GLU THR SEQRES 4 B 233 SER LEU PHE LEU GLU LYS ASP GLY THR TRP VAL MSE ASN SEQRES 5 B 233 GLU ARG TYR LEU GLY ALA ARG GLU GLU PRO SER SER PHE SEQRES 6 B 233 ALA SER TYR GLY THR TRP ALA ARG THR ALA ASP LYS LEU SEQRES 7 B 233 VAL LEU THR ASP SER LYS GLY GLU LYS SER TYR TYR ARG SEQRES 8 B 233 ALA LYS GLY ASP ALA LEU GLU MSE LEU ASP ARG GLU GLY SEQRES 9 B 233 ASN PRO ILE GLU SER GLN PHE ASN TYR THR LEU GLU ALA SEQRES 10 B 233 ALA GLN SER SER LEU PRO MSE THR PRO MSE THR LEU ARG SEQRES 11 B 233 GLY MSE TYR PHE TYR MSE ALA ASP ALA ALA THR PHE THR SEQRES 12 B 233 ASP CYS ALA THR GLY LYS ARG PHE MSE VAL ALA ASN ASN SEQRES 13 B 233 ALA GLU LEU GLU ARG SER TYR LEU ALA ALA ARG GLY HIS SEQRES 14 B 233 SER GLU LYS PRO VAL LEU LEU SER VAL GLU GLY HIS PHE SEQRES 15 B 233 THR LEU GLU GLY ASN PRO ASP THR GLY ALA PRO THR LYS SEQRES 16 B 233 VAL LEU ALA PRO ASP THR ALA GLY LYS PHE TYR PRO ASN SEQRES 17 B 233 GLN ASP CYS SER SER LEU GLY GLN MSE ALA SER MSE THR SEQRES 18 B 233 GLY GLY GLN GLN MSE GLY HIS HIS HIS HIS HIS HIS MODRES 2Z4I MSE A 21 MET SELENOMETHIONINE MODRES 2Z4I MSE A 51 MET SELENOMETHIONINE MODRES 2Z4I MSE A 99 MET SELENOMETHIONINE MODRES 2Z4I MSE A 124 MET SELENOMETHIONINE MODRES 2Z4I MSE A 127 MET SELENOMETHIONINE MODRES 2Z4I MSE A 132 MET SELENOMETHIONINE MODRES 2Z4I MSE A 136 MET SELENOMETHIONINE MODRES 2Z4I MSE A 152 MET SELENOMETHIONINE MODRES 2Z4I MSE B 21 MET SELENOMETHIONINE MODRES 2Z4I MSE B 51 MET SELENOMETHIONINE MODRES 2Z4I MSE B 99 MET SELENOMETHIONINE MODRES 2Z4I MSE B 124 MET SELENOMETHIONINE MODRES 2Z4I MSE B 127 MET SELENOMETHIONINE MODRES 2Z4I MSE B 132 MET SELENOMETHIONINE MODRES 2Z4I MSE B 136 MET SELENOMETHIONINE MODRES 2Z4I MSE B 152 MET SELENOMETHIONINE HET MSE A 21 8 HET MSE A 51 8 HET MSE A 99 8 HET MSE A 124 8 HET MSE A 127 8 HET MSE A 132 8 HET MSE A 136 8 HET MSE A 152 8 HET MSE B 21 8 HET MSE B 51 8 HET MSE B 99 8 HET MSE B 124 8 HET MSE B 127 8 HET MSE B 132 8 HET MSE B 136 8 HET MSE B 152 8 HET SO4 B4770 5 HET P6G A4771 19 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM P6G HEXAETHYLENE GLYCOL HETSYN P6G POLYETHYLENE GLYCOL PEG400 FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 3 SO4 O4 S 2- FORMUL 4 P6G C12 H26 O7 FORMUL 5 HOH *24(H2 O) HELIX 1 1 ASN A 156 GLY A 168 1 13 HELIX 2 2 ASN B 156 ARG B 167 1 12 SHEET 1 A 9 SER A 24 CYS A 31 0 SHEET 2 A 9 CYS A 34 LEU A 43 -1 O ILE A 37 N LEU A 29 SHEET 3 A 9 THR A 48 LEU A 56 -1 O ARG A 54 N GLU A 38 SHEET 4 A 9 SER A 64 ALA A 72 -1 O SER A 67 N MSE A 51 SHEET 5 A 9 LYS A 77 ASP A 82 -1 O VAL A 79 N ALA A 72 SHEET 6 A 9 LYS A 87 LYS A 93 -1 O TYR A 90 N LEU A 78 SHEET 7 A 9 ALA A 96 LEU A 100 -1 O LEU A 100 N TYR A 89 SHEET 8 A 9 THR B 114 ALA B 117 -1 O LEU B 115 N LEU A 97 SHEET 9 A 9 SER A 24 CYS A 31 -1 N ARG A 26 O GLU B 116 SHEET 1 B 2 GLU A 108 PHE A 111 0 SHEET 2 B 2 SER B 109 ASN B 112 -1 O SER B 109 N PHE A 111 SHEET 1 C 9 THR A 114 ALA A 117 0 SHEET 2 C 9 SER B 24 LEU B 29 -1 O ARG B 26 N GLU A 116 SHEET 3 C 9 GLY B 36 LEU B 43 -1 O THR B 39 N GLY B 27 SHEET 4 C 9 THR B 48 LEU B 56 -1 O LEU B 56 N GLY B 36 SHEET 5 C 9 SER B 64 ALA B 72 -1 O SER B 67 N MSE B 51 SHEET 6 C 9 LYS B 77 ASP B 82 -1 O VAL B 79 N ALA B 72 SHEET 7 C 9 LYS B 87 ALA B 92 -1 O SER B 88 N LEU B 80 SHEET 8 C 9 ALA B 96 MSE B 99 -1 O GLU B 98 N ARG B 91 SHEET 9 C 9 THR A 114 ALA A 117 -1 N LEU A 115 O LEU B 97 SHEET 1 D 5 ARG A 150 MSE A 152 0 SHEET 2 D 5 ALA A 140 ASP A 144 -1 N PHE A 142 O PHE A 151 SHEET 3 D 5 MSE A 127 TYR A 135 -1 N MSE A 132 O THR A 143 SHEET 4 D 5 VAL A 174 GLU A 185 -1 O LEU A 176 N GLY A 131 SHEET 5 D 5 THR A 194 PRO A 199 -1 O ALA A 198 N HIS A 181 SHEET 1 E 5 ARG A 150 MSE A 152 0 SHEET 2 E 5 ALA A 140 ASP A 144 -1 N PHE A 142 O PHE A 151 SHEET 3 E 5 MSE A 127 TYR A 135 -1 N MSE A 132 O THR A 143 SHEET 4 E 5 VAL A 174 GLU A 185 -1 O LEU A 176 N GLY A 131 SHEET 5 E 5 PHE A 205 TYR A 206 -1 O TYR A 206 N LEU A 175 SHEET 1 F 7 LYS B 204 TYR B 206 0 SHEET 2 F 7 VAL B 174 GLY B 186 -1 N LEU B 175 O TYR B 206 SHEET 3 F 7 PRO B 193 PRO B 199 -1 O ALA B 198 N HIS B 181 SHEET 4 F 7 ARG B 150 VAL B 153 1 N MSE B 152 O LEU B 197 SHEET 5 F 7 ALA B 140 ASP B 144 -1 N PHE B 142 O PHE B 151 SHEET 6 F 7 MSE B 127 TYR B 135 -1 N MSE B 132 O THR B 143 SHEET 7 F 7 VAL B 174 GLY B 186 -1 O GLY B 180 N MSE B 127 SSBOND 1 CYS A 31 CYS A 34 1555 1555 2.04 SSBOND 2 CYS A 145 CYS A 211 1555 1555 2.04 SSBOND 3 CYS B 31 CYS B 34 1555 1555 2.04 SSBOND 4 CYS B 145 CYS B 211 1555 1555 2.04 LINK C PRO A 20 N MSE A 21 1555 1555 1.33 LINK C MSE A 21 N PRO A 22 1555 1555 1.35 LINK C VAL A 50 N MSE A 51 1555 1555 1.33 LINK C MSE A 51 N ASN A 52 1555 1555 1.32 LINK C GLU A 98 N MSE A 99 1555 1555 1.33 LINK C MSE A 99 N LEU A 100 1555 1555 1.33 LINK C PRO A 123 N MSE A 124 1555 1555 1.33 LINK C MSE A 124 N THR A 125 1555 1555 1.33 LINK C PRO A 126 N MSE A 127 1555 1555 1.32 LINK C MSE A 127 N THR A 128 1555 1555 1.33 LINK C GLY A 131 N MSE A 132 1555 1555 1.33 LINK C MSE A 132 N TYR A 133 1555 1555 1.33 LINK C TYR A 135 N MSE A 136 1555 1555 1.33 LINK C MSE A 136 N ALA A 137 1555 1555 1.33 LINK C PHE A 151 N MSE A 152 1555 1555 1.33 LINK C MSE A 152 N VAL A 153 1555 1555 1.32 LINK C MSE B 21 N PRO B 22 1555 1555 1.35 LINK C VAL B 50 N MSE B 51 1555 1555 1.33 LINK C MSE B 51 N ASN B 52 1555 1555 1.33 LINK C GLU B 98 N MSE B 99 1555 1555 1.33 LINK C MSE B 99 N LEU B 100 1555 1555 1.34 LINK C PRO B 123 N MSE B 124 1555 1555 1.33 LINK C MSE B 124 N THR B 125 1555 1555 1.32 LINK C PRO B 126 N MSE B 127 1555 1555 1.33 LINK C MSE B 127 N THR B 128 1555 1555 1.33 LINK C GLY B 131 N MSE B 132 1555 1555 1.33 LINK C MSE B 132 N TYR B 133 1555 1555 1.34 LINK C TYR B 135 N MSE B 136 1555 1555 1.33 LINK C MSE B 136 N ALA B 137 1555 1555 1.33 LINK C PHE B 151 N MSE B 152 1555 1555 1.33 LINK C MSE B 152 N VAL B 153 1555 1555 1.32 CRYST1 121.422 121.422 84.456 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008236 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008236 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011840 0.00000 MASTER 423 0 18 2 37 0 0 6 0 0 0 36 END