HEADER LYASE 07-MAY-07 2Z0I TITLE CRYSTAL STRUCTURE OF 5-AMINOLEVULINIC ACID DEHYDRATASE TITLE 2 (ALAD) FROM MUS MUSCULUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DELTA-AMINOLEVULINIC ACID DEHYDRATASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MS0399; COMPND 5 EC: 4.2.1.24; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: CELL-FREE PROTEIN SYNTHESIS; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PX041202-30 KEYWDS DEHYDRATASE, TETRAPYRROLE BIOSYNTHESIS, LYASE, STRUCTURAL KEYWDS 2 GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL KEYWDS 3 AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI EXPDTA X-RAY DIFFRACTION AUTHOR H.WANG,Y.XIE,M.KAWAZOE,S.KISHISHITA,K.MURAYAMA,C.TAKEMOTO, AUTHOR 2 T.TERADA,M.SHIROUZU,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 3 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 2 24-FEB-09 2Z0I 1 VERSN REVDAT 1 13-MAY-08 2Z0I 0 JRNL AUTH H.WANG,Y.XIE,M.KAWAZOE,S.KISHISHITA,K.MURAYAMA, JRNL AUTH 2 C.TAKEMOTO,T.TERADA,M.SHIROUZU,S.YOKOYAMA JRNL TITL CRYSTAL STRUCTURE OF 5-AMINOLEVULINIC ACID JRNL TITL 2 DEHYDRATASE (ALAD) FROM MUS MUSCULUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 25267.780 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 12063 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 623 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.011 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.40 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1754 REMARK 3 BIN R VALUE (WORKING SET) : 0.2800 REMARK 3 BIN FREE R VALUE : 0.3830 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 98 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.039 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4299 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 48 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.60000 REMARK 3 B22 (A**2) : -6.60000 REMARK 3 B33 (A**2) : 13.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM SIGMAA (A) : 0.41 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.47 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.66 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.003 REMARK 3 BOND ANGLES (DEGREES) : 0.70 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.65 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 50.18 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2Z0I COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-AUG-07. REMARK 100 THE RCSB ID CODE IS RCSB027366. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-APR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97931 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12792 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.17600 REMARK 200 FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.64000 REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1E51 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS, PEG 400, PH 7, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 60.75500 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 60.75500 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 98.35000 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 60.75500 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 60.75500 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 98.35000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 60.75500 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 60.75500 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 98.35000 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 60.75500 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 60.75500 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 98.35000 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 60.75500 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 60.75500 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 98.35000 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 60.75500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 60.75500 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 98.35000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 60.75500 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 60.75500 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 98.35000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 60.75500 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 60.75500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 98.35000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 32170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 74290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -204.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 GLN A 4 REMARK 465 SER A 5 REMARK 465 VAL A 85 REMARK 465 PRO A 86 REMARK 465 LYS A 87 REMARK 465 ASP A 88 REMARK 465 GLU A 89 REMARK 465 GLN A 90 REMARK 465 GLY A 91 REMARK 465 SER A 92 REMARK 465 ALA A 93 REMARK 465 ALA A 94 REMARK 465 ASP A 95 REMARK 465 SER A 96 REMARK 465 CYS A 124 REMARK 465 PRO A 125 REMARK 465 TYR A 126 REMARK 465 THR A 127 REMARK 465 SER A 128 REMARK 465 HIS A 129 REMARK 465 GLY A 130 REMARK 465 HIS A 131 REMARK 465 CYS A 132 REMARK 465 GLY A 133 REMARK 465 LEU A 134 REMARK 465 LEU A 135 REMARK 465 SER A 136 REMARK 465 GLU A 137 REMARK 465 ASN A 138 REMARK 465 GLY A 139 REMARK 465 ALA A 140 REMARK 465 PHE A 141 REMARK 465 SER A 214 REMARK 465 SER A 215 REMARK 465 PRO A 216 REMARK 465 ALA A 217 REMARK 465 PHE A 218 REMARK 465 GLY A 219 REMARK 465 ASP A 220 REMARK 465 ARG A 221 REMARK 465 ARG A 222 REMARK 465 CYS A 223 REMARK 465 GLU A 329 REMARK 465 GLU A 330 REMARK 465 MSE B 1 REMARK 465 HIS B 2 REMARK 465 HIS B 3 REMARK 465 GLN B 4 REMARK 465 SER B 5 REMARK 465 SER B 83 REMARK 465 ARG B 84 REMARK 465 VAL B 85 REMARK 465 PRO B 86 REMARK 465 LYS B 87 REMARK 465 ASP B 88 REMARK 465 GLU B 89 REMARK 465 GLN B 90 REMARK 465 GLY B 91 REMARK 465 SER B 92 REMARK 465 ALA B 93 REMARK 465 ALA B 94 REMARK 465 ASP B 95 REMARK 465 CYS B 124 REMARK 465 PRO B 125 REMARK 465 TYR B 126 REMARK 465 THR B 127 REMARK 465 SER B 128 REMARK 465 HIS B 129 REMARK 465 GLY B 130 REMARK 465 HIS B 131 REMARK 465 CYS B 132 REMARK 465 GLY B 133 REMARK 465 LEU B 134 REMARK 465 LEU B 135 REMARK 465 SER B 136 REMARK 465 GLU B 137 REMARK 465 ASN B 138 REMARK 465 GLY B 139 REMARK 465 ALA B 140 REMARK 465 PHE B 141 REMARK 465 LEU B 142 REMARK 465 ARG B 209 REMARK 465 ASP B 210 REMARK 465 ALA B 211 REMARK 465 ALA B 212 REMARK 465 GLN B 213 REMARK 465 SER B 214 REMARK 465 SER B 215 REMARK 465 PRO B 216 REMARK 465 ALA B 217 REMARK 465 PHE B 218 REMARK 465 GLY B 219 REMARK 465 ASP B 220 REMARK 465 ARG B 221 REMARK 465 ARG B 222 REMARK 465 CYS B 223 REMARK 465 GLU B 329 REMARK 465 GLU B 330 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 298 OG1 CG2 REMARK 470 THR B 298 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 11 -92.91 -138.17 REMARK 500 PHE A 12 6.77 45.36 REMARK 500 ALA A 22 -178.81 -62.39 REMARK 500 SER A 24 47.01 -145.60 REMARK 500 VAL A 26 89.27 72.15 REMARK 500 PRO A 41 -75.38 -49.10 REMARK 500 PRO A 51 106.71 -49.34 REMARK 500 ASN A 59 39.12 -87.71 REMARK 500 GLN A 60 -8.56 -151.96 REMARK 500 GLU A 62 0.45 -59.26 REMARK 500 SER A 83 43.86 -157.11 REMARK 500 LEU A 187 28.67 -71.37 REMARK 500 PHE A 204 30.20 -89.28 REMARK 500 LEU A 226 127.84 -34.53 REMARK 500 ALA A 230 49.02 -87.30 REMARK 500 PRO A 253 -174.64 -63.76 REMARK 500 VAL A 278 167.19 -46.69 REMARK 500 LEU B 7 -33.30 -133.62 REMARK 500 TYR B 11 -91.85 -154.09 REMARK 500 PHE B 12 8.88 44.95 REMARK 500 ALA B 23 -2.07 63.28 REMARK 500 VAL B 40 109.03 -51.73 REMARK 500 ASP B 42 78.13 -101.18 REMARK 500 ASN B 59 -82.99 -54.26 REMARK 500 ASN B 189 42.99 -94.71 REMARK 500 GLN B 225 114.23 -167.32 REMARK 500 LEU B 226 130.24 -37.81 REMARK 500 PRO B 253 -167.82 -64.38 REMARK 500 VAL B 278 161.98 -48.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMK001003090.1 RELATED DB: TARGETDB DBREF 2Z0I A 1 330 UNP Q9DD05 Q9DD05_MOUSE 1 330 DBREF 2Z0I B 1 330 UNP Q9DD05 Q9DD05_MOUSE 1 330 SEQRES 1 A 330 MSE HIS HIS GLN SER VAL LEU HIS SER GLY TYR PHE HIS SEQRES 2 A 330 PRO LEU LEU ARG SER TRP GLN THR ALA ALA SER THR VAL SEQRES 3 A 330 SER ALA SER ASN LEU ILE TYR PRO ILE PHE VAL THR ASP SEQRES 4 A 330 VAL PRO ASP ASP VAL GLN PRO ILE ALA SER LEU PRO GLY SEQRES 5 A 330 VAL ALA ARG TYR GLY VAL ASN GLN LEU GLU GLU MSE LEU SEQRES 6 A 330 ARG PRO LEU VAL GLU ALA GLY LEU ARG CYS VAL LEU ILE SEQRES 7 A 330 PHE GLY VAL PRO SER ARG VAL PRO LYS ASP GLU GLN GLY SEQRES 8 A 330 SER ALA ALA ASP SER GLU ASP SER PRO THR ILE GLU ALA SEQRES 9 A 330 VAL ARG LEU LEU ARG LYS THR PHE PRO SER LEU LEU VAL SEQRES 10 A 330 ALA CYS ASP VAL CYS LEU CYS PRO TYR THR SER HIS GLY SEQRES 11 A 330 HIS CYS GLY LEU LEU SER GLU ASN GLY ALA PHE LEU SER SEQRES 12 A 330 GLU GLU SER ARG GLN ARG LEU ALA GLU VAL ALA LEU ALA SEQRES 13 A 330 TYR ALA LYS ALA GLY CYS GLN VAL VAL ALA PRO SER ASP SEQRES 14 A 330 MSE MSE ASP GLY ARG VAL GLU ALA ILE LYS ALA ALA LEU SEQRES 15 A 330 LEU LYS HIS GLY LEU GLY ASN ARG VAL SER VAL MSE SER SEQRES 16 A 330 TYR SER ALA LYS PHE ALA SER CYS PHE TYR GLY PRO PHE SEQRES 17 A 330 ARG ASP ALA ALA GLN SER SER PRO ALA PHE GLY ASP ARG SEQRES 18 A 330 ARG CYS TYR GLN LEU PRO PRO GLY ALA ARG GLY LEU ALA SEQRES 19 A 330 LEU ARG ALA VAL ALA ARG ASP ILE GLN GLU GLY ALA ASP SEQRES 20 A 330 MSE LEU MSE VAL LYS PRO GLY LEU PRO TYR LEU ASP MSE SEQRES 21 A 330 VAL ARG GLU VAL LYS ASP LYS HIS PRO GLU LEU PRO LEU SEQRES 22 A 330 ALA VAL TYR GLN VAL SER GLY GLU PHE ALA MSE LEU TRP SEQRES 23 A 330 HIS GLY ALA GLN ALA GLY ALA PHE ASP LEU ARG THR ALA SEQRES 24 A 330 VAL LEU GLU THR MSE THR ALA PHE ARG ARG ALA GLY ALA SEQRES 25 A 330 ASP ILE ILE ILE THR TYR PHE ALA PRO GLN LEU LEU LYS SEQRES 26 A 330 TRP LEU LYS GLU GLU SEQRES 1 B 330 MSE HIS HIS GLN SER VAL LEU HIS SER GLY TYR PHE HIS SEQRES 2 B 330 PRO LEU LEU ARG SER TRP GLN THR ALA ALA SER THR VAL SEQRES 3 B 330 SER ALA SER ASN LEU ILE TYR PRO ILE PHE VAL THR ASP SEQRES 4 B 330 VAL PRO ASP ASP VAL GLN PRO ILE ALA SER LEU PRO GLY SEQRES 5 B 330 VAL ALA ARG TYR GLY VAL ASN GLN LEU GLU GLU MSE LEU SEQRES 6 B 330 ARG PRO LEU VAL GLU ALA GLY LEU ARG CYS VAL LEU ILE SEQRES 7 B 330 PHE GLY VAL PRO SER ARG VAL PRO LYS ASP GLU GLN GLY SEQRES 8 B 330 SER ALA ALA ASP SER GLU ASP SER PRO THR ILE GLU ALA SEQRES 9 B 330 VAL ARG LEU LEU ARG LYS THR PHE PRO SER LEU LEU VAL SEQRES 10 B 330 ALA CYS ASP VAL CYS LEU CYS PRO TYR THR SER HIS GLY SEQRES 11 B 330 HIS CYS GLY LEU LEU SER GLU ASN GLY ALA PHE LEU SER SEQRES 12 B 330 GLU GLU SER ARG GLN ARG LEU ALA GLU VAL ALA LEU ALA SEQRES 13 B 330 TYR ALA LYS ALA GLY CYS GLN VAL VAL ALA PRO SER ASP SEQRES 14 B 330 MSE MSE ASP GLY ARG VAL GLU ALA ILE LYS ALA ALA LEU SEQRES 15 B 330 LEU LYS HIS GLY LEU GLY ASN ARG VAL SER VAL MSE SER SEQRES 16 B 330 TYR SER ALA LYS PHE ALA SER CYS PHE TYR GLY PRO PHE SEQRES 17 B 330 ARG ASP ALA ALA GLN SER SER PRO ALA PHE GLY ASP ARG SEQRES 18 B 330 ARG CYS TYR GLN LEU PRO PRO GLY ALA ARG GLY LEU ALA SEQRES 19 B 330 LEU ARG ALA VAL ALA ARG ASP ILE GLN GLU GLY ALA ASP SEQRES 20 B 330 MSE LEU MSE VAL LYS PRO GLY LEU PRO TYR LEU ASP MSE SEQRES 21 B 330 VAL ARG GLU VAL LYS ASP LYS HIS PRO GLU LEU PRO LEU SEQRES 22 B 330 ALA VAL TYR GLN VAL SER GLY GLU PHE ALA MSE LEU TRP SEQRES 23 B 330 HIS GLY ALA GLN ALA GLY ALA PHE ASP LEU ARG THR ALA SEQRES 24 B 330 VAL LEU GLU THR MSE THR ALA PHE ARG ARG ALA GLY ALA SEQRES 25 B 330 ASP ILE ILE ILE THR TYR PHE ALA PRO GLN LEU LEU LYS SEQRES 26 B 330 TRP LEU LYS GLU GLU MODRES 2Z0I MSE A 64 MET SELENOMETHIONINE MODRES 2Z0I MSE A 170 MET SELENOMETHIONINE MODRES 2Z0I MSE A 171 MET SELENOMETHIONINE MODRES 2Z0I MSE A 194 MET SELENOMETHIONINE MODRES 2Z0I MSE A 248 MET SELENOMETHIONINE MODRES 2Z0I MSE A 250 MET SELENOMETHIONINE MODRES 2Z0I MSE A 260 MET SELENOMETHIONINE MODRES 2Z0I MSE A 284 MET SELENOMETHIONINE MODRES 2Z0I MSE A 304 MET SELENOMETHIONINE MODRES 2Z0I MSE B 64 MET SELENOMETHIONINE MODRES 2Z0I MSE B 170 MET SELENOMETHIONINE MODRES 2Z0I MSE B 171 MET SELENOMETHIONINE MODRES 2Z0I MSE B 194 MET SELENOMETHIONINE MODRES 2Z0I MSE B 248 MET SELENOMETHIONINE MODRES 2Z0I MSE B 250 MET SELENOMETHIONINE MODRES 2Z0I MSE B 260 MET SELENOMETHIONINE MODRES 2Z0I MSE B 284 MET SELENOMETHIONINE MODRES 2Z0I MSE B 304 MET SELENOMETHIONINE HET MSE A 64 8 HET MSE A 170 8 HET MSE A 171 8 HET MSE A 194 8 HET MSE A 248 8 HET MSE A 250 8 HET MSE A 260 8 HET MSE A 284 8 HET MSE A 304 8 HET MSE B 64 8 HET MSE B 170 8 HET MSE B 171 8 HET MSE B 194 8 HET MSE B 248 8 HET MSE B 250 8 HET MSE B 260 8 HET MSE B 284 8 HET MSE B 304 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 18(C5 H11 N O2 SE) FORMUL 3 HOH *48(H2 O) HELIX 1 1 LEU A 7 TYR A 11 5 5 HELIX 2 2 HIS A 13 THR A 21 1 9 HELIX 3 3 SER A 27 ASN A 30 5 4 HELIX 4 4 GLN A 60 LEU A 65 1 6 HELIX 5 5 LEU A 65 GLU A 70 1 6 HELIX 6 6 SER A 99 PHE A 112 1 14 HELIX 7 7 SER A 143 GLY A 161 1 19 HELIX 8 8 GLY A 173 LYS A 184 1 12 HELIX 9 9 TYR A 205 ALA A 212 1 8 HELIX 10 10 ALA A 230 ILE A 242 1 13 HELIX 11 11 GLN A 243 GLY A 245 5 3 HELIX 12 12 GLY A 254 PRO A 256 5 3 HELIX 13 13 TYR A 257 HIS A 268 1 12 HELIX 14 14 VAL A 278 ALA A 291 1 14 HELIX 15 15 ASP A 295 ALA A 310 1 16 HELIX 16 16 PHE A 319 LEU A 327 1 9 HELIX 17 17 LEU B 7 TYR B 11 5 5 HELIX 18 18 HIS B 13 GLN B 20 1 8 HELIX 19 19 SER B 27 SER B 29 5 3 HELIX 20 20 LEU B 61 GLY B 72 1 12 HELIX 21 21 SER B 99 PHE B 112 1 14 HELIX 22 22 SER B 143 GLY B 161 1 19 HELIX 23 23 GLY B 173 LYS B 184 1 12 HELIX 24 24 HIS B 185 VAL B 191 5 7 HELIX 25 25 ALA B 230 GLU B 244 1 15 HELIX 26 26 GLY B 254 PRO B 256 5 3 HELIX 27 27 TYR B 257 HIS B 268 1 12 HELIX 28 28 VAL B 278 ALA B 291 1 14 HELIX 29 29 ASP B 295 GLY B 311 1 17 HELIX 30 30 PHE B 319 LEU B 327 1 9 SHEET 1 A 7 VAL A 44 PRO A 46 0 SHEET 2 A 7 ALA A 54 GLY A 57 -1 O ARG A 55 N GLN A 45 SHEET 3 A 7 ILE A 32 THR A 38 1 N PHE A 36 O TYR A 56 SHEET 4 A 7 CYS A 75 VAL A 81 1 O LEU A 77 N ILE A 35 SHEET 5 A 7 LEU A 116 CYS A 119 1 O ALA A 118 N ILE A 78 SHEET 6 A 7 VAL A 164 VAL A 165 1 O VAL A 164 N CYS A 119 SHEET 7 A 7 SER A 192 VAL A 193 1 O SER A 192 N VAL A 165 SHEET 1 B 4 ALA A 198 LYS A 199 0 SHEET 2 B 4 LEU A 249 LYS A 252 1 O LYS A 252 N ALA A 198 SHEET 3 B 4 LEU A 273 TYR A 276 1 O TYR A 276 N VAL A 251 SHEET 4 B 4 ILE A 314 ILE A 316 1 O ILE A 316 N VAL A 275 SHEET 1 C 7 VAL B 44 PRO B 46 0 SHEET 2 C 7 ALA B 54 GLY B 57 -1 O ARG B 55 N GLN B 45 SHEET 3 C 7 LEU B 31 THR B 38 1 N THR B 38 O TYR B 56 SHEET 4 C 7 CYS B 75 GLY B 80 1 O PHE B 79 N VAL B 37 SHEET 5 C 7 LEU B 116 VAL B 121 1 O ALA B 118 N VAL B 76 SHEET 6 C 7 VAL B 164 PRO B 167 1 O ALA B 166 N CYS B 119 SHEET 7 C 7 SER B 192 VAL B 193 1 O SER B 192 N VAL B 165 SHEET 1 D 7 VAL B 44 PRO B 46 0 SHEET 2 D 7 ALA B 54 GLY B 57 -1 O ARG B 55 N GLN B 45 SHEET 3 D 7 LEU B 31 THR B 38 1 N THR B 38 O TYR B 56 SHEET 4 D 7 ILE B 314 ILE B 316 1 O ILE B 315 N ILE B 32 SHEET 5 D 7 LEU B 273 TYR B 276 1 N VAL B 275 O ILE B 316 SHEET 6 D 7 LEU B 249 LYS B 252 1 N VAL B 251 O TYR B 276 SHEET 7 D 7 ALA B 198 LYS B 199 1 N ALA B 198 O LYS B 252 LINK C GLU A 63 N MSE A 64 1555 1555 1.33 LINK C MSE A 64 N LEU A 65 1555 1555 1.33 LINK C ASP A 169 N MSE A 170 1555 1555 1.33 LINK C MSE A 170 N MSE A 171 1555 1555 1.33 LINK C MSE A 171 N ASP A 172 1555 1555 1.33 LINK C VAL A 193 N MSE A 194 1555 1555 1.33 LINK C MSE A 194 N SER A 195 1555 1555 1.33 LINK C ASP A 247 N MSE A 248 1555 1555 1.33 LINK C MSE A 248 N LEU A 249 1555 1555 1.33 LINK C LEU A 249 N MSE A 250 1555 1555 1.33 LINK C MSE A 250 N VAL A 251 1555 1555 1.33 LINK C ASP A 259 N MSE A 260 1555 1555 1.33 LINK C MSE A 260 N VAL A 261 1555 1555 1.33 LINK C ALA A 283 N MSE A 284 1555 1555 1.33 LINK C MSE A 284 N LEU A 285 1555 1555 1.33 LINK C THR A 303 N MSE A 304 1555 1555 1.33 LINK C MSE A 304 N THR A 305 1555 1555 1.33 LINK C GLU B 63 N MSE B 64 1555 1555 1.33 LINK C MSE B 64 N LEU B 65 1555 1555 1.33 LINK C ASP B 169 N MSE B 170 1555 1555 1.33 LINK C MSE B 170 N MSE B 171 1555 1555 1.33 LINK C MSE B 171 N ASP B 172 1555 1555 1.33 LINK C VAL B 193 N MSE B 194 1555 1555 1.33 LINK C MSE B 194 N SER B 195 1555 1555 1.33 LINK C ASP B 247 N MSE B 248 1555 1555 1.33 LINK C MSE B 248 N LEU B 249 1555 1555 1.33 LINK C LEU B 249 N MSE B 250 1555 1555 1.33 LINK C MSE B 250 N VAL B 251 1555 1555 1.33 LINK C ASP B 259 N MSE B 260 1555 1555 1.33 LINK C MSE B 260 N VAL B 261 1555 1555 1.33 LINK C ALA B 283 N MSE B 284 1555 1555 1.33 LINK C MSE B 284 N LEU B 285 1555 1555 1.33 LINK C THR B 303 N MSE B 304 1555 1555 1.33 LINK C MSE B 304 N THR B 305 1555 1555 1.33 CISPEP 1 LYS A 252 PRO A 253 0 -0.02 CISPEP 2 LYS B 252 PRO B 253 0 -0.08 CRYST1 121.510 121.510 196.700 90.00 90.00 90.00 I 4 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008230 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008230 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005084 0.00000 MASTER 451 0 18 30 25 0 0 6 0 0 0 52 END