HEADER TRANSCRIPTION 05-APR-07 2YTD TITLE SOLUTION STRUCTURE OF THE C2H2 TYPE ZINC FINGER (REGION 426- TITLE 2 458) OF HUMAN ZINC FINGER PROTEIN 473 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZINC FINGER PROTEIN 473; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZF-C2H2; COMPND 5 SYNONYM: ZINC FINGER PROTEIN 100 HOMOLOG, ZFP-100; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ZNF473; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P070115-57; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS ZF-C2H2, NMR, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT KEYWDS 2 ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.TOMIZAWA,N.TOCHIO,H.ABE,K.SAITO,H.LI,M.SATO,S.KOSHIBA, AUTHOR 2 N.KOBAYASHI,T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 3 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 2 24-FEB-09 2YTD 1 VERSN REVDAT 1 09-OCT-07 2YTD 0 JRNL AUTH N.TOCHIO,T.TOMIZAWA,H.ABE,K.SAITO,H.LI,M.SATO, JRNL AUTH 2 S.KOSHIBA,N.KOBAYASHI,T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE C2H2 TYPE ZINC FINGER JRNL TITL 2 (REGION 426-458) OF HUMAN ZINC FINGER PROTEIN 473 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YTD COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-JUN-07. REMARK 100 THE RCSB ID CODE IS RCSB027109. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0MM SAMPLE U-15N, 13C; 20MM REMARK 210 D-TRIS-HCL; 100MM NACL; 0.05MM REMARK 210 ZNCL2; 1MM IDA; 1MM D-DTT; REMARK 210 0.02% NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 5 41.46 34.41 REMARK 500 1 LYS A 11 144.07 -39.01 REMARK 500 1 SER A 16 44.15 -96.27 REMARK 500 1 GLU A 17 -43.78 -131.01 REMARK 500 1 THR A 36 34.87 -83.26 REMARK 500 2 TYR A 13 41.62 -95.91 REMARK 500 2 ARG A 32 -25.97 -39.03 REMARK 500 2 PRO A 43 88.24 -69.72 REMARK 500 3 SER A 16 40.63 -85.47 REMARK 500 3 GLU A 17 -40.33 -133.43 REMARK 500 4 SER A 16 37.58 -93.91 REMARK 500 4 CYS A 18 -47.10 -134.73 REMARK 500 4 TYR A 38 173.95 -59.96 REMARK 500 5 SER A 16 37.24 -90.84 REMARK 500 5 ARG A 32 -26.09 -38.89 REMARK 500 6 SER A 16 42.31 -104.74 REMARK 500 6 GLU A 17 -38.43 -130.01 REMARK 500 7 SER A 5 43.97 -101.11 REMARK 500 7 TYR A 13 73.71 -110.81 REMARK 500 7 THR A 36 74.83 -118.77 REMARK 500 8 SER A 2 118.43 -173.26 REMARK 500 8 GLU A 10 44.79 -84.28 REMARK 500 8 ARG A 32 -25.61 -39.89 REMARK 500 8 PRO A 43 -174.12 -69.77 REMARK 500 9 SER A 3 42.08 39.85 REMARK 500 9 SER A 6 173.25 -55.39 REMARK 500 9 TYR A 38 141.20 -37.87 REMARK 500 9 SER A 41 92.81 -65.87 REMARK 500 10 CYS A 15 97.11 -52.35 REMARK 500 10 PRO A 43 99.73 -69.74 REMARK 500 11 SER A 6 -43.76 -131.41 REMARK 500 11 SER A 45 87.44 -59.60 REMARK 500 12 SER A 8 83.18 -68.79 REMARK 500 12 GLU A 10 134.55 -34.75 REMARK 500 12 ARG A 32 -32.82 -34.50 REMARK 500 12 PRO A 43 95.39 -69.79 REMARK 500 13 SER A 8 -59.99 -120.06 REMARK 500 13 ARG A 39 79.82 -108.65 REMARK 500 13 SER A 44 -50.17 -123.32 REMARK 500 14 SER A 16 37.08 -88.05 REMARK 500 14 ARG A 32 -25.97 -39.46 REMARK 500 14 TYR A 38 128.05 -38.03 REMARK 500 15 SER A 2 42.34 39.43 REMARK 500 15 SER A 3 -61.35 -126.94 REMARK 500 15 SER A 16 40.22 -92.17 REMARK 500 15 GLU A 17 -38.36 -130.33 REMARK 500 15 ARG A 32 -27.39 -38.84 REMARK 500 15 THR A 36 62.84 -118.60 REMARK 500 15 PRO A 40 -169.74 -69.71 REMARK 500 16 SER A 2 48.85 -83.46 REMARK 500 16 SER A 6 98.89 -34.78 REMARK 500 16 LYS A 11 142.65 -39.82 REMARK 500 16 SER A 16 39.83 -88.97 REMARK 500 16 CYS A 18 -39.70 -132.10 REMARK 500 17 SER A 5 -45.61 -133.45 REMARK 500 17 SER A 6 104.92 -34.85 REMARK 500 17 CYS A 15 108.33 -56.45 REMARK 500 17 ARG A 32 -27.89 -37.78 REMARK 500 17 THR A 36 43.68 -90.00 REMARK 500 17 SER A 41 -70.14 -91.26 REMARK 500 18 SER A 45 -59.52 -122.19 REMARK 500 20 TYR A 13 40.50 -91.45 REMARK 500 20 SER A 16 38.96 -92.89 REMARK 500 20 ARG A 32 -18.94 -48.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 15 SG REMARK 620 2 CYS A 18 SG 107.7 REMARK 620 3 HIS A 31 NE2 118.3 119.7 REMARK 620 4 HIS A 35 NE2 103.9 102.8 101.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO003003493.12 RELATED DB: TARGETDB DBREF 2YTD A 8 40 UNP Q8WTR7 ZN473_HUMAN 426 458 SEQADV 2YTD GLY A 1 UNP Q8WTR7 EXPRESSION TAG SEQADV 2YTD SER A 2 UNP Q8WTR7 EXPRESSION TAG SEQADV 2YTD SER A 3 UNP Q8WTR7 EXPRESSION TAG SEQADV 2YTD GLY A 4 UNP Q8WTR7 EXPRESSION TAG SEQADV 2YTD SER A 5 UNP Q8WTR7 EXPRESSION TAG SEQADV 2YTD SER A 6 UNP Q8WTR7 EXPRESSION TAG SEQADV 2YTD GLY A 7 UNP Q8WTR7 EXPRESSION TAG SEQADV 2YTD SER A 41 UNP Q8WTR7 EXPRESSION TAG SEQADV 2YTD GLY A 42 UNP Q8WTR7 EXPRESSION TAG SEQADV 2YTD PRO A 43 UNP Q8WTR7 EXPRESSION TAG SEQADV 2YTD SER A 44 UNP Q8WTR7 EXPRESSION TAG SEQADV 2YTD SER A 45 UNP Q8WTR7 EXPRESSION TAG SEQADV 2YTD GLY A 46 UNP Q8WTR7 EXPRESSION TAG SEQRES 1 A 46 GLY SER SER GLY SER SER GLY SER GLY GLU LYS PRO TYR SEQRES 2 A 46 LYS CYS SER GLU CYS GLY LYS ALA PHE HIS ARG HIS THR SEQRES 3 A 46 HIS LEU ASN GLU HIS ARG ARG ILE HIS THR GLY TYR ARG SEQRES 4 A 46 PRO SER GLY PRO SER SER GLY HET ZN A 201 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ HELIX 1 1 ARG A 24 THR A 36 1 13 SHEET 1 A 2 TYR A 13 LYS A 14 0 SHEET 2 A 2 ALA A 21 PHE A 22 -1 O PHE A 22 N TYR A 13 LINK SG CYS A 15 ZN ZN A 201 1555 1555 2.29 LINK SG CYS A 18 ZN ZN A 201 1555 1555 2.25 LINK NE2 HIS A 31 ZN ZN A 201 1555 1555 2.00 LINK NE2 HIS A 35 ZN ZN A 201 1555 1555 2.08 SITE 1 AC1 4 CYS A 15 CYS A 18 HIS A 31 HIS A 35 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 155 0 1 1 2 0 1 6 0 0 0 4 END