HEADER TRANSCRIPTION 02-APR-07 2YRK TITLE SOLUTION STRUCTURE OF THE ZF-C2H2 DOMAIN IN ZINC FINGER TITLE 2 HOMEODOMAIN 4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZINC FINGER HOMEOBOX PROTEIN 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZF-C2H2 DOMAIN; COMPND 5 SYNONYM: ZINC FINGER HOMEODOMAIN PROTEIN 4, ZFH-4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: P060718-14; SOURCE 7 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS NMR, STRUCTURE GENOMICS, ZF-C2H2 DOMAIN, ZFH-4, STRUCTURAL KEYWDS 2 GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL KEYWDS 3 AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU, AUTHOR 2 T.TARADA,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 3 INITIATIVE (RSGI) REVDAT 2 24-FEB-09 2YRK 1 VERSN REVDAT 1 02-OCT-07 2YRK 0 JRNL AUTH W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA, JRNL AUTH 2 M.SHIROUZU,T.TARADA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE ZF-C2H2 DOMAIN IN ZINC JRNL TITL 2 FINGER HOMEODOMAIN 4 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YRK COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JUN-07. REMARK 100 THE RCSB ID CODE IS RCSB027044. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0MM 13C, 15N-LABELED REMARK 210 PROTEIN; 20MM D-TRIS-HCL(PH REMARK 210 7.0); 100MM NACL; 1MM D-DTT; REMARK 210 0.02% NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 12 37.51 -92.16 REMARK 500 1 PRO A 14 92.59 -69.80 REMARK 500 1 ALA A 25 -32.07 -34.96 REMARK 500 1 LEU A 27 167.51 -44.77 REMARK 500 1 PHE A 34 33.83 -93.25 REMARK 500 1 THR A 45 -38.31 -34.09 REMARK 500 2 SER A 3 -55.37 -120.57 REMARK 500 2 PRO A 14 92.62 -69.74 REMARK 500 2 ALA A 25 -32.29 -34.75 REMARK 500 2 LEU A 27 159.66 -46.99 REMARK 500 2 ASP A 31 -26.51 -39.95 REMARK 500 2 THR A 45 -37.57 -37.23 REMARK 500 2 SER A 48 124.22 -34.75 REMARK 500 2 ARG A 52 114.27 -35.03 REMARK 500 3 PRO A 14 92.61 -69.80 REMARK 500 3 LEU A 27 146.12 -34.31 REMARK 500 3 ILE A 29 -38.30 -37.57 REMARK 500 3 HIS A 32 -70.07 -80.99 REMARK 500 3 PHE A 34 33.00 -91.95 REMARK 500 4 PRO A 14 92.61 -69.73 REMARK 500 4 ALA A 25 -31.44 -35.29 REMARK 500 4 LEU A 27 167.18 -43.97 REMARK 500 4 ASP A 31 -36.23 -34.56 REMARK 500 4 LEU A 50 95.91 -63.05 REMARK 500 5 SER A 6 150.15 -44.40 REMARK 500 5 THR A 12 -31.19 -130.90 REMARK 500 5 PRO A 14 92.48 -69.72 REMARK 500 5 ALA A 25 -38.57 -34.56 REMARK 500 5 LEU A 27 160.81 -39.90 REMARK 500 5 PHE A 34 32.22 -90.70 REMARK 500 5 VAL A 46 -50.71 -127.91 REMARK 500 6 PRO A 14 92.60 -69.74 REMARK 500 6 ALA A 25 -32.75 -34.41 REMARK 500 6 ASP A 31 -26.82 -38.81 REMARK 500 6 GLN A 49 160.49 -48.95 REMARK 500 7 SER A 3 135.29 -174.90 REMARK 500 7 THR A 9 98.43 -58.25 REMARK 500 7 PRO A 14 92.52 -69.77 REMARK 500 7 ALA A 25 -34.85 -34.07 REMARK 500 7 ARG A 30 -73.44 -57.83 REMARK 500 7 ASP A 31 -34.10 -34.95 REMARK 500 8 SER A 6 141.64 -173.68 REMARK 500 8 PRO A 14 92.53 -69.75 REMARK 500 8 LEU A 27 157.33 -44.89 REMARK 500 8 ARG A 30 -72.50 -62.65 REMARK 500 8 ASP A 31 -37.26 -36.11 REMARK 500 8 ILE A 33 -19.99 -48.91 REMARK 500 8 PHE A 34 30.34 -93.86 REMARK 500 8 ASP A 51 99.27 -63.77 REMARK 500 8 GLU A 53 98.14 -38.60 REMARK 500 9 THR A 9 36.49 -89.04 REMARK 500 9 PRO A 14 92.55 -69.74 REMARK 500 9 ALA A 25 -31.47 -38.12 REMARK 500 9 LEU A 27 162.48 -40.77 REMARK 500 9 ARG A 30 -70.39 -64.35 REMARK 500 9 ASP A 31 -37.88 -34.67 REMARK 500 9 HIS A 32 -70.03 -66.79 REMARK 500 9 LYS A 36 -37.87 -34.42 REMARK 500 9 THR A 45 -32.54 -34.70 REMARK 500 9 GLN A 49 98.69 -36.74 REMARK 500 10 THR A 9 39.71 -82.81 REMARK 500 10 PRO A 14 92.53 -69.72 REMARK 500 10 THR A 17 -27.74 -39.77 REMARK 500 10 ALA A 25 -26.24 -38.57 REMARK 500 10 ARG A 26 -61.63 -91.06 REMARK 500 10 LEU A 27 155.56 -40.11 REMARK 500 10 ASP A 31 -32.96 -39.51 REMARK 500 10 HIS A 32 -70.02 -73.57 REMARK 500 10 ILE A 33 -19.88 -48.42 REMARK 500 10 PHE A 34 31.27 -92.74 REMARK 500 10 ASP A 51 116.71 -34.91 REMARK 500 10 LYS A 54 -67.30 -93.10 REMARK 500 11 PRO A 14 92.47 -69.70 REMARK 500 11 ALA A 25 -30.54 -35.99 REMARK 500 11 LEU A 27 149.54 -35.89 REMARK 500 11 GLN A 49 51.88 -90.27 REMARK 500 11 GLU A 53 78.39 -101.76 REMARK 500 12 PRO A 14 92.56 -69.74 REMARK 500 12 ALA A 25 -37.69 -34.10 REMARK 500 12 PHE A 34 33.04 -93.18 REMARK 500 12 THR A 45 -32.65 -36.67 REMARK 500 12 GLN A 49 97.59 -57.26 REMARK 500 13 ASP A 10 44.96 -84.00 REMARK 500 13 PRO A 14 92.60 -69.77 REMARK 500 13 ALA A 25 -38.39 -34.04 REMARK 500 13 LEU A 27 159.79 -41.16 REMARK 500 13 HIS A 32 -70.03 -65.05 REMARK 500 13 PHE A 34 30.32 -86.22 REMARK 500 13 THR A 45 -37.57 -35.00 REMARK 500 13 GLN A 49 100.12 -34.64 REMARK 500 13 GLU A 53 145.77 -37.07 REMARK 500 14 SER A 6 139.72 -174.56 REMARK 500 14 PRO A 14 92.63 -69.76 REMARK 500 14 ALA A 25 -31.23 -35.33 REMARK 500 14 LEU A 27 162.78 -41.39 REMARK 500 14 ARG A 30 -71.95 -60.69 REMARK 500 14 ASP A 31 -34.98 -36.38 REMARK 500 14 ILE A 33 -19.56 -49.09 REMARK 500 14 ASP A 51 46.86 -83.88 REMARK 500 15 PRO A 14 92.72 -69.74 REMARK 500 15 HIS A 32 -70.13 -73.35 REMARK 500 15 GLU A 53 -60.83 -123.37 REMARK 500 16 PRO A 14 92.61 -69.80 REMARK 500 16 LEU A 27 166.94 -44.85 REMARK 500 16 ILE A 29 -39.15 -39.40 REMARK 500 16 ASP A 31 -39.82 -37.41 REMARK 500 17 PRO A 14 92.86 -69.77 REMARK 500 17 ALA A 25 -30.93 -38.39 REMARK 500 17 LEU A 27 155.03 -37.11 REMARK 500 17 HIS A 32 -70.02 -71.34 REMARK 500 17 GLN A 49 127.00 -39.29 REMARK 500 18 PRO A 14 93.86 -69.81 REMARK 500 18 ALA A 25 -17.98 -49.67 REMARK 500 18 ARG A 26 -62.85 -100.77 REMARK 500 18 LEU A 27 164.96 -41.95 REMARK 500 18 ASP A 31 -30.49 -38.79 REMARK 500 18 HIS A 32 -70.12 -77.46 REMARK 500 18 SER A 48 42.95 -107.67 REMARK 500 18 GLN A 49 126.76 -35.10 REMARK 500 19 SER A 5 41.97 35.39 REMARK 500 19 PRO A 14 92.59 -69.73 REMARK 500 19 ALA A 25 -28.10 -37.37 REMARK 500 19 LEU A 27 159.34 -38.98 REMARK 500 19 ASP A 31 -28.67 -38.68 REMARK 500 19 HIS A 32 -70.04 -77.12 REMARK 500 19 SER A 48 41.73 -104.04 REMARK 500 19 GLU A 53 -52.40 -123.92 REMARK 500 20 PRO A 14 96.08 -69.72 REMARK 500 20 ARG A 26 -60.96 -98.58 REMARK 500 20 LEU A 27 154.84 -45.34 REMARK 500 20 HIS A 32 -70.66 -67.32 REMARK 500 20 THR A 45 -32.00 -39.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 16 SG REMARK 620 2 CYS A 19 SG 102.3 REMARK 620 3 HIS A 32 NE2 97.8 118.1 REMARK 620 4 HIS A 38 ND1 111.0 116.1 109.5 REMARK 620 N 1 2 3 REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: AR_001000691.1 RELATED DB: TARGETDB DBREF 2YRK A 8 55 UNP Q9JJN2 ZFHX4_MOUSE 2937 2984 SEQADV 2YRK GLY A 1 UNP Q9JJN2 EXPRESSION TAG SEQADV 2YRK SER A 2 UNP Q9JJN2 EXPRESSION TAG SEQADV 2YRK SER A 3 UNP Q9JJN2 EXPRESSION TAG SEQADV 2YRK GLY A 4 UNP Q9JJN2 EXPRESSION TAG SEQADV 2YRK SER A 5 UNP Q9JJN2 EXPRESSION TAG SEQADV 2YRK SER A 6 UNP Q9JJN2 EXPRESSION TAG SEQADV 2YRK GLY A 7 UNP Q9JJN2 EXPRESSION TAG SEQRES 1 A 55 GLY SER SER GLY SER SER GLY GLY THR ASP GLY THR LYS SEQRES 2 A 55 PRO GLU CYS THR LEU CYS GLY VAL LYS TYR SER ALA ARG SEQRES 3 A 55 LEU SER ILE ARG ASP HIS ILE PHE SER LYS GLN HIS ILE SEQRES 4 A 55 SER LYS VAL ARG GLU THR VAL GLY SER GLN LEU ASP ARG SEQRES 5 A 55 GLU LYS ASP HET ZN A 201 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ HELIX 1 1 ILE A 29 ILE A 33 1 5 HELIX 2 2 LYS A 36 GLU A 44 1 9 SHEET 1 A 2 GLU A 15 CYS A 16 0 SHEET 2 A 2 VAL A 21 LYS A 22 -1 LINK SG CYS A 16 ZN ZN A 201 1555 1555 2.33 LINK SG CYS A 19 ZN ZN A 201 1555 1555 2.25 LINK NE2 HIS A 32 ZN ZN A 201 1555 1555 2.09 LINK ND1 HIS A 38 ZN ZN A 201 1555 1555 2.06 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 224 0 1 2 2 0 0 6 0 0 0 5 END