HEADER MEMBRANE PROTEIN 19-OCT-09 2WVP TITLE SYNTHETICALLY MODIFIED OMPG COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER MEMBRANE PROTEIN G; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 OTHER_DETAILS: Y209C MUTANT CHEMICALLY MODIFIED WITH COMPND 7 N-(2-ETHYL-IODO-ACETAMIDE)-DANSYL SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K-12; SOURCE 5 ATCC: 11775; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) OMP9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET20B KEYWDS ION-CHANNEL ENGINEERING, OMPG HYBRIDS, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR W.GROSSE,P.REISS,S.REITZ,M.CEBI,W.LUEBBEN,U.KOERT,L.-O.ESSEN REVDAT 2 20-APR-11 2WVP 1 AUTHOR JRNL REMARK REVDAT 1 14-JUL-10 2WVP 0 JRNL AUTH W.GROSSE,P.REISS,S.REITZ,M.CEBI,W.LUEBBEN,U.KOERT,L.-O.ESSEN JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF A JRNL TITL 2 SYNTHETICALLY MODIFIED OMPG. JRNL REF BIOORG.MED.CHEM. V. 18 7716 2010 JRNL REFN ISSN 0968-0896 JRNL PMID 20378361 JRNL DOI 10.1016/J.BMC.2010.03.044 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 94.47 REMARK 3 NUMBER OF REFLECTIONS : 13933 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.22400 REMARK 3 R VALUE (WORKING SET) : 0.22081 REMARK 3 FREE R VALUE : 0.28735 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 FREE R VALUE TEST SET COUNT : 730 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.400 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.462 REMARK 3 REFLECTION IN BIN (WORKING SET) : 491 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 44.47 REMARK 3 BIN R VALUE (WORKING SET) : 0.268 REMARK 3 BIN FREE R VALUE SET COUNT : 20 REMARK 3 BIN FREE R VALUE : 0.419 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2201 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 143 REMARK 3 SOLVENT ATOMS : 77 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 59.5 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.306 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.35 REMARK 3 B22 (A**2) : 0.24 REMARK 3 B33 (A**2) : -0.69 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : -0.21 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.415 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.298 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.229 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 21.587 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.936 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.890 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2417 ; 0.011 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1661 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3244 ; 1.310 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3942 ; 0.806 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 266 ; 7.678 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 141 ;35.004 ;23.830 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 322 ;16.007 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;16.241 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 297 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2678 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 555 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1305 ; 0.627 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 544 ; 0.077 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2084 ; 1.181 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1112 ; 1.442 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1157 ; 2.387 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 283 REMARK 3 ORIGIN FOR THE GROUP (A): -17.0360 -10.0320 5.4390 REMARK 3 T TENSOR REMARK 3 T11: 0.0627 T22: 0.0661 REMARK 3 T33: 0.0188 T12: 0.0051 REMARK 3 T13: -0.0071 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 3.2274 L22: 3.3868 REMARK 3 L33: 0.4028 L12: 0.0807 REMARK 3 L13: 0.0765 L23: 0.7887 REMARK 3 S TENSOR REMARK 3 S11: -0.0399 S12: -0.3688 S13: -0.1157 REMARK 3 S21: 0.3091 S22: -0.0286 S23: 0.1635 REMARK 3 S31: 0.0455 S32: -0.0604 S33: 0.0684 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 ONLY. U VALUES HAVE BEEN REFINED RESIDUAL ONLY. REMARK 3 THERE ARE THREE GAPS IN DISORDERED LOOPS REMARK 3 ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. REMARK 3 ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. REMARK 4 REMARK 4 2WVP COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-OCT-09. REMARK 100 THE PDBE ID CODE IS EBI-41422. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.75 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9755 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD (QUANTUM 315R) REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15345 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.40 REMARK 200 RESOLUTION RANGE LOW (A) : 30.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 3.6 REMARK 200 R MERGE (I) : 0.05 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.70 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.3 REMARK 200 R MERGE FOR SHELL (I) : 0.71 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.20 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2F1C REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM CACODYLATE, PH 5.75, 1.2 REMARK 280 M SODIUM FORMATE AND 28% PEG400 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 49.78000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.90500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 49.78000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.90500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, TYR 230 TO CYS REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 1 REMARK 465 GLU A 2 REMARK 465 ARG A 3 REMARK 465 GLU A 20 REMARK 465 GLY A 21 REMARK 465 TYR A 22 REMARK 465 GLY A 23 REMARK 465 GLU A 24 REMARK 465 ASP A 25 REMARK 465 MET A 26 REMARK 465 ASP A 27 REMARK 465 SER A 58 REMARK 465 ALA A 59 REMARK 465 GLY A 60 REMARK 465 TRP A 222 REMARK 465 GLN A 223 REMARK 465 ASP A 224 REMARK 465 ASP A 225 REMARK 465 ILE A 226 REMARK 465 GLU A 227 REMARK 465 ARG A 228 REMARK 465 HIS A 284 REMARK 465 HIS A 285 REMARK 465 HIS A 286 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 261 CG ND1 CD2 CE1 NE2 REMARK 470 ASP A 265 CG OD1 OD2 REMARK 470 SER A 266 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 62 166.62 176.40 REMARK 500 ASP A 100 87.72 46.80 REMARK 500 GLU A 101 94.77 -178.51 REMARK 500 PRO A 102 127.65 -37.53 REMARK 500 ASN A 139 137.05 72.78 REMARK 500 ASN A 162 -169.99 -171.14 REMARK 500 ASP A 180 93.41 -58.97 REMARK 500 HIS A 231 -95.05 167.65 REMARK 500 GLN A 259 -65.95 -106.81 REMARK 500 ASP A 260 23.58 -154.79 REMARK 500 HIS A 261 -166.20 76.46 REMARK 500 ASP A 262 -103.82 22.13 REMARK 500 ASP A 265 82.97 123.69 REMARK 500 SER A 266 4.04 106.51 REMARK 500 ASP A 267 -121.94 3.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 N-OCTYLTETRAOXYETHYLENE (EDO): PARTIAL ELECTRON DENSITY OF REMARK 600 N-OCTYLTETRAOXYETHYLENE WAS MODELED WITH ETHYLENGLYCOLE REMARK 600 UNIT REMARK 600 N-OCTYLTETRAOXYETHYLENE (C8E): PARTIAL OR COMPLETE ELECTRON REMARK 600 DENSITY OF N-OCTYLTETRAOXYETHYLENE WAS MODELED WITH REMARK 600 ETHYLENGLYCOLE UNIT REMARK 600 N-(2-ETHYL-ACETAMIDE)-DANSYL (420): REMARK 600 N2ETHYLIODOACETAMIDEDANSYL WAS COVALENTLY BOUND TO REMARK 600 CYSTEINE 209 BY SUBSTITUTION OF IODIDE REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 C8E A 1285 REMARK 610 C8E A 1289 REMARK 610 C8E A 1290 REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 14-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 15-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 420 A1284 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A1285 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A1286 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A1287 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A1288 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A1289 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A1290 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2F1C RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE MONOMERIC PORIN OMPG REMARK 900 RELATED ID: 2IWW RELATED DB: PDB REMARK 900 STRUCTURE OF THE MONOMERIC OUTER MEMBRANE REMARK 900 PORIN OMPG IN THE OPEN AND CLOSED CONFORMATION REMARK 900 RELATED ID: 2IWV RELATED DB: PDB REMARK 900 STRUCTURE OF THE MONOMERIC OUTER MEMBRANE REMARK 900 PORIN OMPG IN THE OPEN AND CLOSED CONFORMATION DBREF 2WVP A 1 280 UNP P76045 OMPG_ECOLI 22 301 SEQADV 2WVP HIS A 281 UNP P76045 EXPRESSION TAG SEQADV 2WVP HIS A 282 UNP P76045 EXPRESSION TAG SEQADV 2WVP HIS A 283 UNP P76045 EXPRESSION TAG SEQADV 2WVP HIS A 284 UNP P76045 EXPRESSION TAG SEQADV 2WVP HIS A 285 UNP P76045 EXPRESSION TAG SEQADV 2WVP HIS A 286 UNP P76045 EXPRESSION TAG SEQADV 2WVP CYS A 209 UNP P76045 TYR 230 ENGINEERED MUTATION SEQRES 1 A 286 GLU GLU ARG ASN ASP TRP HIS PHE ASN ILE GLY ALA MET SEQRES 2 A 286 TYR GLU ILE GLU ASN VAL GLU GLY TYR GLY GLU ASP MET SEQRES 3 A 286 ASP GLY LEU ALA GLU PRO SER VAL TYR PHE ASN ALA ALA SEQRES 4 A 286 ASN GLY PRO TRP ARG ILE ALA LEU ALA TYR TYR GLN GLU SEQRES 5 A 286 GLY PRO VAL ASP TYR SER ALA GLY LYS ARG GLY THR TRP SEQRES 6 A 286 PHE ASP ARG PRO GLU LEU GLU VAL HIS TYR GLN PHE LEU SEQRES 7 A 286 GLU ASN ASP ASP PHE SER PHE GLY LEU THR GLY GLY PHE SEQRES 8 A 286 ARG ASN TYR GLY TYR HIS TYR VAL ASP GLU PRO GLY LYS SEQRES 9 A 286 ASP THR ALA ASN MET GLN ARG TRP LYS ILE ALA PRO ASP SEQRES 10 A 286 TRP ASP VAL LYS LEU THR ASP ASP LEU ARG PHE ASN GLY SEQRES 11 A 286 TRP LEU SER MET TYR LYS PHE ALA ASN ASP LEU ASN THR SEQRES 12 A 286 THR GLY TYR ALA ASP THR ARG VAL GLU THR GLU THR GLY SEQRES 13 A 286 LEU GLN TYR THR PHE ASN GLU THR VAL ALA LEU ARG VAL SEQRES 14 A 286 ASN TYR TYR LEU GLU ARG GLY PHE ASN MET ASP ASP SER SEQRES 15 A 286 ARG ASN ASN GLY GLU PHE SER THR GLN GLU ILE ARG ALA SEQRES 16 A 286 TYR LEU PRO LEU THR LEU GLY ASN HIS SER VAL THR PRO SEQRES 17 A 286 CYS THR ARG ILE GLY LEU ASP ARG TRP SER ASN TRP ASP SEQRES 18 A 286 TRP GLN ASP ASP ILE GLU ARG GLU GLY HIS ASP PHE ASN SEQRES 19 A 286 ARG VAL GLY LEU PHE TYR GLY TYR ASP PHE GLN ASN GLY SEQRES 20 A 286 LEU SER VAL SER LEU GLU TYR ALA PHE GLU TRP GLN ASP SEQRES 21 A 286 HIS ASP GLU GLY ASP SER ASP LYS PHE HIS TYR ALA GLY SEQRES 22 A 286 VAL GLY VAL ASN TYR SER PHE HIS HIS HIS HIS HIS HIS HET 420 A1284 46 HET C8E A1285 13 HET C8E A1286 21 HET C8E A1287 21 HET C8E A1288 21 HET C8E A1289 8 HET C8E A1290 9 HET EDO A1291 4 HETNAM 420 N-[2-({[5-(DIMETHYLAMINO)NAPHTHALEN-1-YL] HETNAM 2 420 SULFONYL}AMINO)ETHYL]-2-IODOACETAMIDE HETNAM C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 420 C16 H20 I N3 O3 S FORMUL 3 C8E 6(C16 H34 O5) FORMUL 4 EDO C2 H6 O2 FORMUL 5 HOH *77(H2 O) HELIX 1 1 ASP A 140 GLY A 145 1 6 SHEET 1 AA15 TRP A 6 ASN A 18 0 SHEET 2 AA15 PHE A 269 HIS A 282 -1 O HIS A 270 N ASN A 18 SHEET 3 AA15 LEU A 248 TRP A 258 -1 O SER A 249 N ASN A 277 SHEET 4 AA15 ASN A 234 ASP A 243 -1 O ASN A 234 N TRP A 258 SHEET 5 AA15 HIS A 204 TRP A 217 -1 O SER A 205 N GLY A 241 SHEET 6 AA15 SER A 189 TYR A 196 -1 O SER A 189 N TRP A 217 SHEET 7 AA15 ALA A 166 PHE A 177 -1 O ARG A 168 N TYR A 196 SHEET 8 AA15 THR A 149 THR A 160 -1 O THR A 149 N PHE A 177 SHEET 9 AA15 LEU A 126 ALA A 138 -1 O ARG A 127 N GLN A 158 SHEET 10 AA15 THR A 106 LYS A 121 -1 O GLN A 110 N ALA A 138 SHEET 11 AA15 PHE A 83 HIS A 97 -1 O SER A 84 N ASP A 119 SHEET 12 AA15 TRP A 65 LEU A 78 -1 O TRP A 65 N HIS A 97 SHEET 13 AA15 TRP A 43 PRO A 54 -1 O ARG A 44 N HIS A 74 SHEET 14 AA15 LEU A 29 ASN A 40 -1 O ALA A 30 N GLY A 53 SHEET 15 AA15 TRP A 6 ASN A 18 0 LINK SG CYS A 209 C1 A420 A1284 1555 1555 1.84 LINK SG CYS A 209 C1 B420 A1284 1555 1555 1.82 SITE 1 AC1 9 MET A 13 TYR A 35 TYR A 196 THR A 207 SITE 2 AC1 9 CYS A 209 PHE A 239 GLU A 253 HOH A2073 SITE 3 AC1 9 HOH A2074 SITE 1 AC2 3 TRP A 43 TRP A 112 ALA A 138 SITE 1 AC3 9 PHE A 36 THR A 164 LEU A 197 LEU A 201 SITE 2 AC3 9 PRO A 208 CYS A 209 THR A 210 GLY A 237 SITE 3 AC3 9 C8E A1288 SITE 1 AC4 4 ALA A 12 SER A 33 TYR A 159 VAL A 276 SITE 1 AC5 4 ILE A 10 ILE A 193 ASN A 246 C8E A1286 SITE 1 AC6 4 ALA A 30 GLN A 51 TYR A 159 PHE A 161 SITE 1 AC7 1 LEU A 157 CRYST1 99.560 69.810 59.130 90.00 103.60 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010044 0.000000 0.002430 0.00000 SCALE2 0.000000 0.014325 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017400 0.00000 MASTER 392 0 8 1 15 0 11 6 0 0 0 22 END