HEADER CELL INVASION 27-AUG-09 2WQW TITLE DOUBLE-DISULFIDE CROSS-LINKED CRYSTAL DIMER OF THE LISTERIA TITLE 2 MONOCYTOGENES INLB INTERNALIN DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERNALIN B; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: INTERNALIN DOMAIN, RESIDUES 36-321; COMPND 5 SYNONYM: INLB; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: RESIDUES 36-321 OF LISTERIA MONOCYTOGENES INLB CROSS- COMPND 9 LINKED INTO DIMERS BY TWO INTERMOLECULAR DISULFIDE BONDS BETWEEN C206 COMPND 10 AND C227 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; SOURCE 3 ORGANISM_TAXID: 169963; SOURCE 4 STRAIN: EGD-E; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 CODON PLUS (DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PETM30 KEYWDS HGF RECEPTOR LIGAND, LEUCINE-RICH REPEAT, LEUCINE RICH REPEAT, LRR, KEYWDS 2 C-MET LIGAND, CELL INVASION, VIRULENCE FACTOR EXPDTA X-RAY DIFFRACTION AUTHOR D.M.FERRARIS,D.W.HEINZ,H.H.NIEMANN REVDAT 4 06-MAR-19 2WQW 1 REMARK REVDAT 3 09-FEB-10 2WQW 1 JRNL REMARK REVDAT 2 24-NOV-09 2WQW 1 JRNL REVDAT 1 10-NOV-09 2WQW 0 JRNL AUTH D.M.FERRARIS,E.GHERARDI,Y.DI,D.W.HEINZ,H.H.NIEMANN JRNL TITL LIGAND-MEDIATED DIMERIZATION OF THE MET RECEPTOR TYROSINE JRNL TITL 2 KINASE BY THE BACTERIAL INVASION PROTEIN INLB. JRNL REF J.MOL.BIOL. V. 395 522 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 19900460 JRNL DOI 10.1016/J.JMB.2009.10.074 REMARK 2 REMARK 2 RESOLUTION. 2.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.24 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 35166 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1849 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.24 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.30 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2554 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.2640 REMARK 3 BIN FREE R VALUE SET COUNT : 126 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4512 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 63 REMARK 3 SOLVENT ATOMS : 142 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.09000 REMARK 3 B22 (A**2) : -1.09000 REMARK 3 B33 (A**2) : 1.64000 REMARK 3 B12 (A**2) : -0.55000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.244 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.199 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.140 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.370 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4640 ; 0.024 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3129 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6269 ; 1.909 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7789 ; 1.259 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 570 ; 6.952 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 198 ;47.120 ;26.970 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 870 ;16.593 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;23.839 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 754 ; 0.130 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4966 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 750 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2864 ; 0.682 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1138 ; 0.258 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4684 ; 1.120 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1776 ; 2.165 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1585 ; 3.233 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : B A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 1 B 321 1 REMARK 3 1 A 1 A 321 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 3780 ; 0.08 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 3780 ; 0.08 ; 0.05 REMARK 3 TIGHT THERMAL 1 A (A**2): 3780 ; 0.18 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 3780 ; 0.18 ; 0.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 33 A 70 REMARK 3 ORIGIN FOR THE GROUP (A): -21.4922 14.5427 8.5138 REMARK 3 T TENSOR REMARK 3 T11: 0.3744 T22: 0.2975 REMARK 3 T33: 0.0959 T12: -0.1557 REMARK 3 T13: -0.0502 T23: 0.0316 REMARK 3 L TENSOR REMARK 3 L11: 4.4620 L22: 8.5006 REMARK 3 L33: 4.7914 L12: 3.2769 REMARK 3 L13: 2.1889 L23: 2.2222 REMARK 3 S TENSOR REMARK 3 S11: -0.5321 S12: 0.5354 S13: 0.0362 REMARK 3 S21: -1.0325 S22: 0.5145 S23: 0.0977 REMARK 3 S31: -0.2429 S32: 0.1615 S33: 0.0176 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 71 A 135 REMARK 3 ORIGIN FOR THE GROUP (A): -20.9965 18.6822 22.4895 REMARK 3 T TENSOR REMARK 3 T11: 0.0865 T22: 0.1248 REMARK 3 T33: 0.1346 T12: 0.0095 REMARK 3 T13: -0.0383 T23: 0.0190 REMARK 3 L TENSOR REMARK 3 L11: 1.5921 L22: 3.5939 REMARK 3 L33: 2.9444 L12: 0.4305 REMARK 3 L13: 0.2023 L23: 1.7468 REMARK 3 S TENSOR REMARK 3 S11: -0.1121 S12: 0.0980 S13: 0.0753 REMARK 3 S21: -0.0944 S22: 0.0137 S23: 0.2258 REMARK 3 S31: -0.1545 S32: -0.2712 S33: 0.0984 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 136 A 207 REMARK 3 ORIGIN FOR THE GROUP (A): -20.1730 25.2232 40.1145 REMARK 3 T TENSOR REMARK 3 T11: 0.0625 T22: 0.0635 REMARK 3 T33: 0.1742 T12: 0.0326 REMARK 3 T13: -0.0308 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.0679 L22: 2.1119 REMARK 3 L33: 3.1377 L12: 1.0453 REMARK 3 L13: 0.2298 L23: 0.7398 REMARK 3 S TENSOR REMARK 3 S11: -0.0762 S12: 0.0408 S13: 0.0741 REMARK 3 S21: -0.2019 S22: -0.0029 S23: 0.2295 REMARK 3 S31: -0.0564 S32: -0.3229 S33: 0.0791 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 208 A 241 REMARK 3 ORIGIN FOR THE GROUP (A): -9.4803 31.2261 48.5058 REMARK 3 T TENSOR REMARK 3 T11: 0.0165 T22: 0.0187 REMARK 3 T33: 0.1428 T12: -0.0072 REMARK 3 T13: -0.0372 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 3.5190 L22: 3.6909 REMARK 3 L33: 4.8727 L12: -2.2833 REMARK 3 L13: -0.1221 L23: 1.3438 REMARK 3 S TENSOR REMARK 3 S11: -0.0061 S12: -0.0040 S13: -0.0113 REMARK 3 S21: -0.0925 S22: 0.0118 S23: 0.0706 REMARK 3 S31: -0.1683 S32: 0.2824 S33: -0.0057 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 242 A 299 REMARK 3 ORIGIN FOR THE GROUP (A): -10.6378 53.4551 55.1310 REMARK 3 T TENSOR REMARK 3 T11: 0.3759 T22: 0.0691 REMARK 3 T33: 0.3372 T12: 0.0514 REMARK 3 T13: -0.1005 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 3.0565 L22: 8.6039 REMARK 3 L33: 6.7935 L12: 0.3862 REMARK 3 L13: 0.6285 L23: -1.2811 REMARK 3 S TENSOR REMARK 3 S11: -0.2967 S12: 0.0688 S13: 0.6571 REMARK 3 S21: 0.0312 S22: 0.1861 S23: 0.3664 REMARK 3 S31: -1.3158 S32: -0.2636 S33: 0.1106 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 300 A 321 REMARK 3 ORIGIN FOR THE GROUP (A): -7.7064 42.2020 50.2931 REMARK 3 T TENSOR REMARK 3 T11: 0.2247 T22: 0.0459 REMARK 3 T33: 0.1227 T12: -0.0368 REMARK 3 T13: -0.0498 T23: -0.0231 REMARK 3 L TENSOR REMARK 3 L11: 2.6733 L22: 18.5060 REMARK 3 L33: 3.9497 L12: -4.3006 REMARK 3 L13: 1.9700 L23: -3.3915 REMARK 3 S TENSOR REMARK 3 S11: -0.4041 S12: -0.1780 S13: 0.1712 REMARK 3 S21: 0.0261 S22: 0.3457 S23: -0.3343 REMARK 3 S31: -0.6885 S32: 0.0765 S33: 0.0584 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 33 B 70 REMARK 3 ORIGIN FOR THE GROUP (A): -22.9107 -11.2652 8.5235 REMARK 3 T TENSOR REMARK 3 T11: 0.4578 T22: 0.3036 REMARK 3 T33: 0.0903 T12: 0.0627 REMARK 3 T13: -0.0160 T23: -0.0428 REMARK 3 L TENSOR REMARK 3 L11: 5.3419 L22: 9.8123 REMARK 3 L33: 3.7115 L12: -3.1934 REMARK 3 L13: 0.1011 L23: 0.9343 REMARK 3 S TENSOR REMARK 3 S11: 0.3070 S12: 0.7340 S13: -0.0671 REMARK 3 S21: -1.2996 S22: -0.4020 S23: 0.2575 REMARK 3 S31: 0.2955 S32: 0.0943 S33: 0.0950 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 71 B 135 REMARK 3 ORIGIN FOR THE GROUP (A): -26.5400 -8.7565 22.4690 REMARK 3 T TENSOR REMARK 3 T11: 0.0578 T22: 0.0974 REMARK 3 T33: 0.1435 T12: -0.0482 REMARK 3 T13: -0.0152 T23: -0.0361 REMARK 3 L TENSOR REMARK 3 L11: 2.9005 L22: 3.0434 REMARK 3 L33: 4.1250 L12: -1.5300 REMARK 3 L13: -1.0103 L23: 0.4586 REMARK 3 S TENSOR REMARK 3 S11: -0.0439 S12: 0.0377 S13: -0.1790 REMARK 3 S21: -0.1692 S22: 0.0019 S23: 0.1910 REMARK 3 S31: 0.2078 S32: -0.2494 S33: 0.0420 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 136 B 207 REMARK 3 ORIGIN FOR THE GROUP (A): -31.9788 -4.7660 39.9753 REMARK 3 T TENSOR REMARK 3 T11: 0.0455 T22: 0.0995 REMARK 3 T33: 0.1784 T12: -0.0327 REMARK 3 T13: -0.0176 T23: -0.0262 REMARK 3 L TENSOR REMARK 3 L11: 1.2561 L22: 1.3650 REMARK 3 L33: 4.1321 L12: -0.9881 REMARK 3 L13: -0.6692 L23: 0.9637 REMARK 3 S TENSOR REMARK 3 S11: 0.0347 S12: 0.0692 S13: -0.1301 REMARK 3 S21: -0.0375 S22: -0.0798 S23: 0.1668 REMARK 3 S31: 0.3577 S32: -0.2806 S33: 0.0452 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 208 B 241 REMARK 3 ORIGIN FOR THE GROUP (A): -31.7208 7.3301 48.4229 REMARK 3 T TENSOR REMARK 3 T11: 0.0379 T22: 0.0234 REMARK 3 T33: 0.1648 T12: -0.0025 REMARK 3 T13: -0.0076 T23: -0.0407 REMARK 3 L TENSOR REMARK 3 L11: 4.8850 L22: 2.1687 REMARK 3 L33: 5.6797 L12: 0.6089 REMARK 3 L13: -1.0543 L23: 0.7673 REMARK 3 S TENSOR REMARK 3 S11: 0.0299 S12: 0.1916 S13: -0.1029 REMARK 3 S21: 0.0630 S22: -0.1114 S23: 0.0274 REMARK 3 S31: -0.4079 S32: -0.0888 S33: 0.0814 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 242 B 299 REMARK 3 ORIGIN FOR THE GROUP (A): -51.4751 17.5141 54.8855 REMARK 3 T TENSOR REMARK 3 T11: 0.0516 T22: 0.2741 REMARK 3 T33: 0.3035 T12: 0.0654 REMARK 3 T13: 0.0483 T23: -0.0970 REMARK 3 L TENSOR REMARK 3 L11: 8.5589 L22: 3.7953 REMARK 3 L33: 3.6422 L12: -3.4956 REMARK 3 L13: 2.7154 L23: -0.3682 REMARK 3 S TENSOR REMARK 3 S11: -0.0479 S12: -0.1711 S13: 0.0374 REMARK 3 S21: 0.0627 S22: -0.0763 S23: 0.4587 REMARK 3 S31: -0.0328 S32: -0.6143 S33: 0.1242 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 300 B 321 REMARK 3 ORIGIN FOR THE GROUP (A): -40.3257 14.4328 50.1348 REMARK 3 T TENSOR REMARK 3 T11: 0.0899 T22: 0.1712 REMARK 3 T33: 0.1691 T12: 0.0736 REMARK 3 T13: 0.0137 T23: -0.0773 REMARK 3 L TENSOR REMARK 3 L11: 15.6693 L22: 4.1004 REMARK 3 L33: 2.8194 L12: -3.6524 REMARK 3 L13: 3.6674 L23: -0.4502 REMARK 3 S TENSOR REMARK 3 S11: 0.3731 S12: -0.1819 S13: 0.9931 REMARK 3 S21: -0.0901 S22: -0.4475 S23: -0.0001 REMARK 3 S31: -0.1708 S32: -0.3928 S33: 0.0744 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2WQW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1290038721. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9535 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37017 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.240 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.88000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1H6T REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 293 K. PROTEIN (6.7 MG/ML) PLUS REMARK 280 RESERVOIR = 2 PLUS 1. RESERVOIR SOLUTION IS 44-52% PEG2000, 0.1 REMARK 280 M CHES PH=9,5, 0.2M NACL., PH 9.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 93.49500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 53.97936 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 38.35700 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 93.49500 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 53.97936 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 38.35700 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 93.49500 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 53.97936 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 38.35700 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 93.49500 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 53.97936 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 38.35700 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 93.49500 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 53.97936 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 38.35700 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 93.49500 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 53.97936 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 38.35700 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 107.95873 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 76.71400 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 107.95873 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 76.71400 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 107.95873 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 76.71400 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 107.95873 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 76.71400 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 107.95873 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 76.71400 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 107.95873 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 76.71400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNITS ARE DIMERS FORMED BY DISULFIDE REMARK 300 BONDS BETWEEN CYSTEINES 206 AND 227. THE DIMERS ARE 2-FOLD REMARK 300 SYMMETRIC AND CONSIST OF TWO CHAINS A OR TWO CHAINS B. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 17.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 115.07100 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 2.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 115.07100 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, GLY 206 TO CYS REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ALA 227 TO CYS REMARK 400 ENGINEERED RESIDUE IN CHAIN A, CYS 242 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN B, GLY 206 TO CYS REMARK 400 ENGINEERED RESIDUE IN CHAIN B, ALA 227 TO CYS REMARK 400 ENGINEERED RESIDUE IN CHAIN B, CYS 242 TO ALA REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2034 O HOH A 2036 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL A 100 CB VAL A 100 CG2 -0.190 REMARK 500 ASP A 233 CB ASP A 233 CG -0.152 REMARK 500 VAL A 294 CB VAL A 294 CG1 -0.138 REMARK 500 VAL A 294 CB VAL A 294 CG2 -0.164 REMARK 500 VAL B 294 CB VAL B 294 CG1 -0.131 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 51 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 VAL A 100 CG1 - CB - CG2 ANGL. DEV. = -11.1 DEGREES REMARK 500 ARG A 184 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 224 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 VAL A 294 CG1 - CB - CG2 ANGL. DEV. = -12.2 DEGREES REMARK 500 ARG A 310 CD - NE - CZ ANGL. DEV. = 13.7 DEGREES REMARK 500 ARG A 310 NE - CZ - NH1 ANGL. DEV. = 8.8 DEGREES REMARK 500 ARG A 310 NE - CZ - NH2 ANGL. DEV. = -10.9 DEGREES REMARK 500 VAL B 100 CG1 - CB - CG2 ANGL. DEV. = -9.7 DEGREES REMARK 500 LEU B 119 CB - CG - CD1 ANGL. DEV. = 14.2 DEGREES REMARK 500 ARG B 184 NE - CZ - NH1 ANGL. DEV. = -3.4 DEGREES REMARK 500 VAL B 234 CG1 - CB - CG2 ANGL. DEV. = -11.1 DEGREES REMARK 500 ARG B 310 CD - NE - CZ ANGL. DEV. = 11.0 DEGREES REMARK 500 ARG B 310 NE - CZ - NH1 ANGL. DEV. = -8.9 DEGREES REMARK 500 ARG B 310 NE - CZ - NH2 ANGL. DEV. = 7.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 97 70.98 -114.19 REMARK 500 ASN A 108 -161.72 -122.84 REMARK 500 ASN A 174 -151.86 -135.16 REMARK 500 ASN A 196 -155.95 -125.99 REMARK 500 SER A 216 152.52 -44.38 REMARK 500 ASN A 218 -159.41 -112.29 REMARK 500 LYS A 280 127.16 -33.31 REMARK 500 LEU A 287 77.01 -114.77 REMARK 500 LEU B 97 72.45 -110.57 REMARK 500 ASN B 108 -165.51 -111.58 REMARK 500 ASN B 130 -162.48 -79.62 REMARK 500 LEU B 149 42.27 -141.19 REMARK 500 LEU B 163 55.87 -118.31 REMARK 500 ASN B 174 -152.52 -130.09 REMARK 500 ASN B 196 -155.51 -127.17 REMARK 500 SER B 216 152.56 -46.75 REMARK 500 ASN B 218 -156.77 -112.90 REMARK 500 LEU B 237 17.69 -140.86 REMARK 500 LYS B 280 126.76 -32.39 REMARK 500 LEU B 287 74.02 -115.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 310 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1322 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 1322 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1323 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 1323 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1324 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 1324 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 1325 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 1326 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 1327 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1H6T RELATED DB: PDB REMARK 900 INTERNALIN B: CRYSTAL STRUCTURE OF FUSED N- TERMINAL DOMAINS. REMARK 900 RELATED ID: 1OTM RELATED DB: PDB REMARK 900 CALCIUM-BINDING MUTANT OF THE INTERNALIN B LRR DOMAIN REMARK 900 RELATED ID: 2UZX RELATED DB: PDB REMARK 900 STRUCTURE OF THE HUMAN RECEPTOR TYROSINE KINASE MET IN COMPLEX WITH REMARK 900 THE LISTERIA MONOCYTOGENES INVASION PROTEIN INLB: CRYSTAL FORM I REMARK 900 RELATED ID: 1OTN RELATED DB: PDB REMARK 900 CALCIUM-BINDING MUTANT OF THE INTERNALIN B LRR DOMAIN REMARK 900 RELATED ID: 2UZY RELATED DB: PDB REMARK 900 STRUCTURE OF THE HUMAN RECEPTOR TYROSINE KINASE MET IN COMPLEX WITH REMARK 900 THE LISTERIA MONOCYTOGENES INVASION PROTEIN INLB: LOW RESOLUTION, REMARK 900 CRYSTAL FORM II REMARK 900 RELATED ID: 1M9S RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF INTERNALIN B (INLB), A LISTERIAMONOCYTOGENES REMARK 900 VIRULENCE PROTEIN CONTAINING SH3-LIKEDOMAINS. REMARK 900 RELATED ID: 1OTO RELATED DB: PDB REMARK 900 CALCIUM-BINDING MUTANT OF THE INTERNALIN B LRR DOMAIN REMARK 900 RELATED ID: 1D0B RELATED DB: PDB REMARK 900 INTERNALIN B LEUCINE RICH REPEAT DOMAIN REMARK 900 RELATED ID: 2WQV RELATED DB: PDB REMARK 900 INTERNALIN DOMAIN OF LISTERIA MONOCYTOGENES INLB: RHOMBOHEDRAL REMARK 900 CRYSTAL FORM REMARK 900 RELATED ID: 2WQU RELATED DB: PDB REMARK 900 INTERNALIN DOMAIN OF LISTERIA MONOCYTOGENES INLB: TRICLINIC CRYSTAL REMARK 900 FORM REMARK 900 RELATED ID: 2WQX RELATED DB: PDB REMARK 900 INLB321_4R: S199R, D200R, G206R, A227R, C242A MUTANT OF THE REMARK 900 LISTERIA MONOCYTOGENES INLB INTERNALIN DOMAIN DBREF 2WQW A 36 321 UNP P25147 INLB_LISMO 36 321 DBREF 2WQW B 36 321 UNP P25147 INLB_LISMO 36 321 SEQADV 2WQW CYS A 206 UNP P25147 GLY 206 ENGINEERED MUTATION SEQADV 2WQW CYS A 227 UNP P25147 ALA 227 ENGINEERED MUTATION SEQADV 2WQW ALA A 242 UNP P25147 CYS 242 ENGINEERED MUTATION SEQADV 2WQW CYS B 206 UNP P25147 GLY 206 ENGINEERED MUTATION SEQADV 2WQW CYS B 227 UNP P25147 ALA 227 ENGINEERED MUTATION SEQADV 2WQW ALA B 242 UNP P25147 CYS 242 ENGINEERED MUTATION SEQRES 1 A 286 GLU THR ILE THR VAL PRO THR PRO ILE LYS GLN ILE PHE SEQRES 2 A 286 SER ASP ASP ALA PHE ALA GLU THR ILE LYS ASP ASN LEU SEQRES 3 A 286 LYS LYS LYS SER VAL THR ASP ALA VAL THR GLN ASN GLU SEQRES 4 A 286 LEU ASN SER ILE ASP GLN ILE ILE ALA ASN ASN SER ASP SEQRES 5 A 286 ILE LYS SER VAL GLN GLY ILE GLN TYR LEU PRO ASN VAL SEQRES 6 A 286 THR LYS LEU PHE LEU ASN GLY ASN LYS LEU THR ASP ILE SEQRES 7 A 286 LYS PRO LEU ALA ASN LEU LYS ASN LEU GLY TRP LEU PHE SEQRES 8 A 286 LEU ASP GLU ASN LYS VAL LYS ASP LEU SER SER LEU LYS SEQRES 9 A 286 ASP LEU LYS LYS LEU LYS SER LEU SER LEU GLU HIS ASN SEQRES 10 A 286 GLY ILE SER ASP ILE ASN GLY LEU VAL HIS LEU PRO GLN SEQRES 11 A 286 LEU GLU SER LEU TYR LEU GLY ASN ASN LYS ILE THR ASP SEQRES 12 A 286 ILE THR VAL LEU SER ARG LEU THR LYS LEU ASP THR LEU SEQRES 13 A 286 SER LEU GLU ASP ASN GLN ILE SER ASP ILE VAL PRO LEU SEQRES 14 A 286 ALA CYS LEU THR LYS LEU GLN ASN LEU TYR LEU SER LYS SEQRES 15 A 286 ASN HIS ILE SER ASP LEU ARG ALA LEU CYS GLY LEU LYS SEQRES 16 A 286 ASN LEU ASP VAL LEU GLU LEU PHE SER GLN GLU ALA LEU SEQRES 17 A 286 ASN LYS PRO ILE ASN HIS GLN SER ASN LEU VAL VAL PRO SEQRES 18 A 286 ASN THR VAL LYS ASN THR ASP GLY SER LEU VAL THR PRO SEQRES 19 A 286 GLU ILE ILE SER ASP ASP GLY ASP TYR GLU LYS PRO ASN SEQRES 20 A 286 VAL LYS TRP HIS LEU PRO GLU PHE THR ASN GLU VAL SER SEQRES 21 A 286 PHE ILE PHE TYR GLN PRO VAL THR ILE GLY LYS ALA LYS SEQRES 22 A 286 ALA ARG PHE HIS GLY ARG VAL THR GLN PRO LEU LYS GLU SEQRES 1 B 286 GLU THR ILE THR VAL PRO THR PRO ILE LYS GLN ILE PHE SEQRES 2 B 286 SER ASP ASP ALA PHE ALA GLU THR ILE LYS ASP ASN LEU SEQRES 3 B 286 LYS LYS LYS SER VAL THR ASP ALA VAL THR GLN ASN GLU SEQRES 4 B 286 LEU ASN SER ILE ASP GLN ILE ILE ALA ASN ASN SER ASP SEQRES 5 B 286 ILE LYS SER VAL GLN GLY ILE GLN TYR LEU PRO ASN VAL SEQRES 6 B 286 THR LYS LEU PHE LEU ASN GLY ASN LYS LEU THR ASP ILE SEQRES 7 B 286 LYS PRO LEU ALA ASN LEU LYS ASN LEU GLY TRP LEU PHE SEQRES 8 B 286 LEU ASP GLU ASN LYS VAL LYS ASP LEU SER SER LEU LYS SEQRES 9 B 286 ASP LEU LYS LYS LEU LYS SER LEU SER LEU GLU HIS ASN SEQRES 10 B 286 GLY ILE SER ASP ILE ASN GLY LEU VAL HIS LEU PRO GLN SEQRES 11 B 286 LEU GLU SER LEU TYR LEU GLY ASN ASN LYS ILE THR ASP SEQRES 12 B 286 ILE THR VAL LEU SER ARG LEU THR LYS LEU ASP THR LEU SEQRES 13 B 286 SER LEU GLU ASP ASN GLN ILE SER ASP ILE VAL PRO LEU SEQRES 14 B 286 ALA CYS LEU THR LYS LEU GLN ASN LEU TYR LEU SER LYS SEQRES 15 B 286 ASN HIS ILE SER ASP LEU ARG ALA LEU CYS GLY LEU LYS SEQRES 16 B 286 ASN LEU ASP VAL LEU GLU LEU PHE SER GLN GLU ALA LEU SEQRES 17 B 286 ASN LYS PRO ILE ASN HIS GLN SER ASN LEU VAL VAL PRO SEQRES 18 B 286 ASN THR VAL LYS ASN THR ASP GLY SER LEU VAL THR PRO SEQRES 19 B 286 GLU ILE ILE SER ASP ASP GLY ASP TYR GLU LYS PRO ASN SEQRES 20 B 286 VAL LYS TRP HIS LEU PRO GLU PHE THR ASN GLU VAL SER SEQRES 21 B 286 PHE ILE PHE TYR GLN PRO VAL THR ILE GLY LYS ALA LYS SEQRES 22 B 286 ALA ARG PHE HIS GLY ARG VAL THR GLN PRO LEU LYS GLU HET PEG A1322 7 HET PEG A1323 7 HET PEG A1324 7 HET PEG B1322 7 HET PEG B1323 7 HET PEG B1324 7 HET PEG B1325 7 HET PEG B1326 7 HET PEG B1327 7 HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 3 PEG 9(C4 H10 O3) FORMUL 12 HOH *142(H2 O) HELIX 1 1 ILE A 44 PHE A 48 1 5 HELIX 2 2 ASP A 50 LEU A 61 1 12 HELIX 3 3 THR A 71 ASN A 76 1 6 HELIX 4 4 ILE A 113 LEU A 119 5 7 HELIX 5 5 LEU A 135 LYS A 139 5 5 HELIX 6 6 ILE A 179 LEU A 185 5 7 HELIX 7 7 ILE A 201 LEU A 207 5 7 HELIX 8 8 LEU A 223 CYS A 227 5 5 HELIX 9 9 ILE B 44 PHE B 48 1 5 HELIX 10 10 ASP B 50 LEU B 61 1 12 HELIX 11 11 THR B 71 ASN B 76 1 6 HELIX 12 12 ILE B 113 LEU B 119 5 7 HELIX 13 13 LEU B 135 LYS B 139 5 5 HELIX 14 14 ILE B 179 LEU B 185 5 7 HELIX 15 15 ILE B 201 LEU B 207 5 7 HELIX 16 16 LEU B 223 CYS B 227 5 5 SHEET 1 AA 2 THR A 42 PRO A 43 0 SHEET 2 AA 2 ALA A 69 VAL A 70 -1 O VAL A 70 N THR A 42 SHEET 1 AB 8 GLN A 80 ILE A 82 0 SHEET 2 AB 8 LYS A 102 PHE A 104 1 O LYS A 102 N ILE A 81 SHEET 3 AB 8 LEU A 125 PHE A 126 1 N PHE A 126 O LEU A 103 SHEET 4 AB 8 SER A 146 SER A 148 1 O SER A 146 N LEU A 125 SHEET 5 AB 8 SER A 168 TYR A 170 1 O SER A 168 N LEU A 147 SHEET 6 AB 8 THR A 190 SER A 192 1 O THR A 190 N LEU A 169 SHEET 7 AB 8 ASN A 212 TYR A 214 1 O ASN A 212 N LEU A 191 SHEET 8 AB 8 VAL A 234 GLU A 236 1 O VAL A 234 N LEU A 213 SHEET 1 AC 3 ALA A 242 LEU A 243 0 SHEET 2 AC 3 VAL A 315 LYS A 320 1 N THR A 316 O ALA A 242 SHEET 3 AC 3 ILE A 247 ASN A 248 1 O ILE A 247 N LYS A 320 SHEET 1 AD 2 ALA A 242 LEU A 243 0 SHEET 2 AD 2 VAL A 315 LYS A 320 1 N THR A 316 O ALA A 242 SHEET 1 AE 3 ASN A 252 PRO A 256 0 SHEET 2 AE 3 ASN A 282 HIS A 286 -1 O VAL A 283 N VAL A 255 SHEET 3 AE 3 TYR A 278 GLU A 279 -1 O GLU A 279 N ASN A 282 SHEET 1 AF 2 GLN A 300 THR A 303 0 SHEET 2 AF 2 LYS A 308 PHE A 311 -1 O ALA A 309 N VAL A 302 SHEET 1 BA 2 THR B 42 PRO B 43 0 SHEET 2 BA 2 ALA B 69 VAL B 70 -1 O VAL B 70 N THR B 42 SHEET 1 BB 8 GLN B 80 ILE B 82 0 SHEET 2 BB 8 LYS B 102 PHE B 104 1 O LYS B 102 N ILE B 81 SHEET 3 BB 8 LEU B 125 PHE B 126 1 N PHE B 126 O LEU B 103 SHEET 4 BB 8 SER B 146 SER B 148 1 O SER B 146 N LEU B 125 SHEET 5 BB 8 SER B 168 TYR B 170 1 O SER B 168 N LEU B 147 SHEET 6 BB 8 THR B 190 SER B 192 1 O THR B 190 N LEU B 169 SHEET 7 BB 8 ASN B 212 TYR B 214 1 O ASN B 212 N LEU B 191 SHEET 8 BB 8 VAL B 234 GLU B 236 1 O VAL B 234 N LEU B 213 SHEET 1 BC 3 ALA B 242 LEU B 243 0 SHEET 2 BC 3 VAL B 315 LYS B 320 1 N THR B 316 O ALA B 242 SHEET 3 BC 3 ILE B 247 ASN B 248 1 O ILE B 247 N LYS B 320 SHEET 1 BD 2 ALA B 242 LEU B 243 0 SHEET 2 BD 2 VAL B 315 LYS B 320 1 N THR B 316 O ALA B 242 SHEET 1 BE 3 ASN B 252 PRO B 256 0 SHEET 2 BE 3 ASN B 282 HIS B 286 -1 O VAL B 283 N VAL B 255 SHEET 3 BE 3 TYR B 278 GLU B 279 -1 O GLU B 279 N ASN B 282 SHEET 1 BF 2 GLN B 300 THR B 303 0 SHEET 2 BF 2 LYS B 308 PHE B 311 -1 O ALA B 309 N VAL B 302 SSBOND 1 CYS A 206 CYS A 227 1555 6556 2.07 SSBOND 2 CYS B 206 CYS B 227 1555 5556 2.15 CISPEP 1 LYS A 280 PRO A 281 0 7.84 CISPEP 2 LYS B 280 PRO B 281 0 7.83 SITE 1 AC1 4 ASN A 99 HOH A2064 HOH A2065 PHE B 104 SITE 1 AC2 8 LYS A 120 ASN A 121 LYS A 143 PHE B 126 SITE 2 AC2 8 ASP B 128 SER B 148 HOH B2019 HOH B2074 SITE 1 AC3 5 ASP A 128 SER A 148 GLU A 150 ASN B 121 SITE 2 AC3 5 LYS B 143 SITE 1 AC4 2 THR A 37 ASN B 85 SITE 1 AC5 2 LYS A 142 LYS A 145 SITE 1 AC6 7 ASN B 76 SER B 77 ASP B 79 ASN B 99 SITE 2 AC6 7 HOH B2017 HOH B2075 HOH B2076 SITE 1 AC7 7 PRO A 269 GLU A 270 ILE A 272 PRO B 269 SITE 2 AC7 7 GLU B 270 ILE B 272 HOH B2077 SITE 1 AC8 3 ASN A 85 THR B 37 TYR B 96 SITE 1 AC9 3 ASP B 222 THR B 258 LYS B 260 CRYST1 186.990 186.990 115.071 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005348 0.003088 0.000000 0.00000 SCALE2 0.000000 0.006175 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008690 0.00000 MASTER 745 0 9 16 40 0 13 6 0 0 0 44 END