HEADER CHAPERONE 22-MAY-09 2WJ7 TITLE HUMAN ALPHAB CRYSTALLIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-CRYSTALLIN B CHAIN; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 FRAGMENT: ALPHA-CRYSTALLIN DOMAIN, RESIDUES 67-157; COMPND 5 SYNONYM: ALPHA(B)-CRYSTALLIN, ROSENTHAL FIBER COMPONENT, HEAT SHOCK COMPND 6 PROTEIN BETA-5, HSPB5, RENAL CARCINOMA ANTIGEN NY-REN-27, HUMAN COMPND 7 ALPHAB; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DESMIN-RELATED MYOPATHY, PHOSPHOPROTEIN, DISEASE MUTATION, EYE LENS KEYWDS 2 PROTEIN, METHYLATION, POLYMORPHISM, GLYCOPROTEIN, CATARACT, KEYWDS 3 OXIDATION, CHAPERONE, ACETYLATION EXPDTA X-RAY DIFFRACTION AUTHOR C.E.NAYLOR,C.BAGNERIS,O.A.BATEMAN,N.CRONIN,N.H.KEEP,C.SLINGSBY REVDAT 3 15-MAY-19 2WJ7 1 REMARK REVDAT 2 29-SEP-09 2WJ7 1 JRNL REVDAT 1 11-AUG-09 2WJ7 0 JRNL AUTH C.BAGNERIS,O.A.BATEMAN,C.E.NAYLOR,N.CRONIN,W.C.BOELENS, JRNL AUTH 2 N.H.KEEP,C.SLINGSBY JRNL TITL CRYSTAL STRUCTURES OF ALPHA-CRYSTALLIN DOMAIN DIMERS OF JRNL TITL 2 ALPHAB-CRYSTALLIN AND HSP20. JRNL REF J.MOL.BIOL. V. 392 1242 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19646995 JRNL DOI 10.1016/J.JMB.2009.07.069 REMARK 2 REMARK 2 RESOLUTION. 2.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 17813 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.255 REMARK 3 R VALUE (WORKING SET) : 0.252 REMARK 3 FREE R VALUE : 0.320 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 912 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.0383 - 5.0300 0.98 2493 140 0.2851 0.3123 REMARK 3 2 5.0300 - 3.9937 0.98 2466 159 0.1948 0.2586 REMARK 3 3 3.9937 - 3.4893 0.99 2452 123 0.2015 0.3133 REMARK 3 4 3.4893 - 3.1704 0.99 2456 137 0.2387 0.3016 REMARK 3 5 3.1704 - 2.9432 0.98 2451 119 0.2925 0.4213 REMARK 3 6 2.9432 - 2.7698 0.96 2391 116 0.2786 0.3823 REMARK 3 7 2.7698 - 2.6311 0.87 2192 118 0.2636 0.3686 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 66.90 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.560 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 68.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.09000 REMARK 3 B22 (A**2) : 6.88570 REMARK 3 B33 (A**2) : -10.97570 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.48500 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.022 3013 REMARK 3 ANGLE : 2.071 4086 REMARK 3 CHIRALITY : 0.119 470 REMARK 3 PLANARITY : 0.008 538 REMARK 3 DIHEDRAL : 18.906 1076 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 4 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 12:32 OR RESSEQ 34:39 REMARK 3 OR RESSEQ 41:44 OR RESSEQ 49:50 OR RESSEQ REMARK 3 52:60 OR RESSEQ 78:83 ) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 12:32 OR RESSEQ 34:39 REMARK 3 OR RESSEQ 41:44 OR RESSEQ 49:50 OR RESSEQ REMARK 3 52:60 OR RESSEQ 78:83 ) REMARK 3 ATOM PAIRS NUMBER : 370 REMARK 3 RMSD : 0.146 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 12:32 OR RESSEQ 34:39 REMARK 3 OR RESSEQ 41:44 OR RESSEQ 49:50 OR RESSEQ REMARK 3 52:60 OR RESSEQ 78:83 ) REMARK 3 SELECTION : CHAIN C AND (RESSEQ 12:32 OR RESSEQ 34:39 REMARK 3 OR RESSEQ 41:44 OR RESSEQ 49:50 OR RESSEQ REMARK 3 52:60 OR RESSEQ 78:83 ) REMARK 3 ATOM PAIRS NUMBER : 373 REMARK 3 RMSD : 0.125 REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 12:32 OR RESSEQ 34:39 REMARK 3 OR RESSEQ 41:44 OR RESSEQ 49:50 OR RESSEQ REMARK 3 52:60 OR RESSEQ 78:83 ) REMARK 3 SELECTION : CHAIN D AND (RESSEQ 14:32 OR RESSEQ 34:39 REMARK 3 OR RESSEQ 41:44 OR RESSEQ 49:50 OR RESSEQ REMARK 3 52:60 OR RESSEQ 78:83 ) REMARK 3 ATOM PAIRS NUMBER : 352 REMARK 3 RMSD : 0.140 REMARK 3 NCS OPERATOR : 4 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 12:32 OR RESSEQ 34:39 REMARK 3 OR RESSEQ 41:44 OR RESSEQ 49:50 OR RESSEQ REMARK 3 52:60 OR RESSEQ 78:83 ) REMARK 3 SELECTION : CHAIN E AND (RESSEQ 12:32 OR RESSEQ 34:39 REMARK 3 OR RESSEQ 41:44 OR RESSEQ 49:50 OR RESSEQ REMARK 3 52:60 OR RESSEQ 78:83 ) REMARK 3 ATOM PAIRS NUMBER : 376 REMARK 3 RMSD : 0.135 REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 3:11 ) REMARK 3 SELECTION : CHAIN C AND (RESSEQ 3:11 ) REMARK 3 ATOM PAIRS NUMBER : 62 REMARK 3 RMSD : 0.134 REMARK 3 NCS GROUP : 3 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 61:77 ) REMARK 3 SELECTION : CHAIN C AND (RESSEQ 61:77 ) REMARK 3 ATOM PAIRS NUMBER : 114 REMARK 3 RMSD : 0.137 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 61:77 ) REMARK 3 SELECTION : CHAIN E AND (RESSEQ 61:77 ) REMARK 3 ATOM PAIRS NUMBER : 120 REMARK 3 RMSD : 0.148 REMARK 3 NCS GROUP : 4 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN B AND (RESSEQ 61:77 ) REMARK 3 SELECTION : CHAIN D AND (RESSEQ 61:77 ) REMARK 3 ATOM PAIRS NUMBER : 117 REMARK 3 RMSD : 0.085 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2WJ7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1290039897. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0066 REMARK 200 MONOCHROMATOR : SI CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17862 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.630 REMARK 200 RESOLUTION RANGE LOW (A) : 190.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.22000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.63000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2WJ5 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4 DAYS AT 16 DEGREESC IN 100 MM BICINE REMARK 280 PH 9.0, 55% 2-METHYL-2,4-PENTANDIOL, AT A PROTEIN CONCENTRATION REMARK 280 OF 20 MG/ML USING 1 UL PROTEIN SOLUTION AND 2 UL RESERVOIR REMARK 280 SOLUTION., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 24.73000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.03500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 24.73000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.03500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 ALA A 2 REMARK 465 GLN A 88 REMARK 465 VAL A 89 REMARK 465 SER A 90 REMARK 465 GLY A 91 REMARK 465 PRO A 92 REMARK 465 GLU A 93 REMARK 465 ARG A 94 REMARK 465 GLY B 1 REMARK 465 ALA B 2 REMARK 465 MET B 3 REMARK 465 GLU B 4 REMARK 465 MET B 5 REMARK 465 ARG B 6 REMARK 465 LEU B 7 REMARK 465 GLU B 8 REMARK 465 LYS B 9 REMARK 465 ASP B 10 REMARK 465 ARG B 11 REMARK 465 GLY B 84 REMARK 465 PRO B 85 REMARK 465 ARG B 86 REMARK 465 LYS B 87 REMARK 465 GLN B 88 REMARK 465 VAL B 89 REMARK 465 SER B 90 REMARK 465 GLY B 91 REMARK 465 PRO B 92 REMARK 465 GLU B 93 REMARK 465 ARG B 94 REMARK 465 GLY C 1 REMARK 465 ALA C 2 REMARK 465 GLN C 88 REMARK 465 VAL C 89 REMARK 465 SER C 90 REMARK 465 GLY C 91 REMARK 465 PRO C 92 REMARK 465 GLU C 93 REMARK 465 ARG C 94 REMARK 465 GLY D 1 REMARK 465 ALA D 2 REMARK 465 MET D 3 REMARK 465 GLU D 4 REMARK 465 MET D 5 REMARK 465 ARG D 6 REMARK 465 LEU D 7 REMARK 465 GLU D 8 REMARK 465 LYS D 9 REMARK 465 ASP D 10 REMARK 465 ARG D 11 REMARK 465 PHE D 12 REMARK 465 SER D 13 REMARK 465 PRO D 85 REMARK 465 ARG D 86 REMARK 465 LYS D 87 REMARK 465 GLN D 88 REMARK 465 VAL D 89 REMARK 465 SER D 90 REMARK 465 GLY D 91 REMARK 465 PRO D 92 REMARK 465 GLU D 93 REMARK 465 ARG D 94 REMARK 465 GLY E 1 REMARK 465 ALA E 2 REMARK 465 MET E 3 REMARK 465 GLU E 4 REMARK 465 MET E 5 REMARK 465 ARG E 6 REMARK 465 LEU E 7 REMARK 465 GLU E 8 REMARK 465 LYS E 9 REMARK 465 ASP E 10 REMARK 465 ARG E 11 REMARK 465 ARG E 86 REMARK 465 LYS E 87 REMARK 465 GLN E 88 REMARK 465 VAL E 89 REMARK 465 SER E 90 REMARK 465 GLY E 91 REMARK 465 PRO E 92 REMARK 465 GLU E 93 REMARK 465 ARG E 94 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 3 CG SD CE REMARK 470 ARG A 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 11 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 27 CG CD CE NZ REMARK 470 LYS A 29 CD CE NZ REMARK 470 ASP A 33 CG OD1 OD2 REMARK 470 LYS A 40 CD CE NZ REMARK 470 GLU A 42 CG CD OE1 OE2 REMARK 470 ARG A 60 CD NE CZ NH1 NH2 REMARK 470 LYS A 87 CG CD CE NZ REMARK 470 PHE B 12 CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 24 CD OE1 OE2 REMARK 470 LYS B 27 CD CE NZ REMARK 470 GLU B 42 CG CD OE1 OE2 REMARK 470 GLU B 43 CG CD OE1 OE2 REMARK 470 MET C 3 SD CE REMARK 470 GLU C 4 CG CD OE1 OE2 REMARK 470 ARG C 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 11 CD NE CZ NH1 NH2 REMARK 470 LYS C 27 CD CE NZ REMARK 470 LYS C 29 CD CE NZ REMARK 470 LEU C 31 CG CD1 CD2 REMARK 470 GLU C 43 CD OE1 OE2 REMARK 470 GLU C 47 CG CD OE1 OE2 REMARK 470 LYS C 58 CD CE NZ REMARK 470 ARG C 60 CD NE CZ NH1 NH2 REMARK 470 LEU C 68 CG CD1 CD2 REMARK 470 ILE C 70 CG1 CG2 CD1 REMARK 470 LYS C 87 CG CD CE NZ REMARK 470 LYS D 19 CG CD CE NZ REMARK 470 GLU D 24 CG CD OE1 OE2 REMARK 470 LYS D 27 CD CE NZ REMARK 470 LYS D 29 CD CE NZ REMARK 470 ASP D 33 CG OD1 OD2 REMARK 470 GLU D 42 CG CD OE1 OE2 REMARK 470 GLU D 47 CG CD OE1 OE2 REMARK 470 PHE D 50 CD1 CD2 CE1 CE2 CZ REMARK 470 ARG D 60 CD NE CZ NH1 NH2 REMARK 470 ILE D 61 CG1 CG2 CD1 REMARK 470 LEU E 31 CG CD1 CD2 REMARK 470 GLU E 47 CG CD OE1 OE2 REMARK 470 LYS E 58 CD CE NZ REMARK 470 ARG E 60 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 9 O HOH A 2003 1.96 REMARK 500 O LEU B 68 N ILE B 70 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 N LEU C 7 NE2 GLN C 45 3445 1.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 4 CB GLU A 4 CG 0.140 REMARK 500 GLU A 4 CG GLU A 4 CD 0.113 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 44 NE - CZ - NH2 ANGL. DEV. = -4.9 DEGREES REMARK 500 ILE D 51 CB - CA - C ANGL. DEV. = -13.7 DEGREES REMARK 500 PRO D 62 C - N - CA ANGL. DEV. = 9.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 4 150.84 -34.23 REMARK 500 ASP A 64 37.78 -98.19 REMARK 500 LYS B 19 -14.79 -49.04 REMARK 500 PRO B 62 32.45 -55.14 REMARK 500 ALA B 63 -57.96 67.36 REMARK 500 ASP B 64 40.93 -61.55 REMARK 500 VAL B 65 133.14 -179.28 REMARK 500 ASP B 66 121.00 166.29 REMARK 500 PRO B 67 -157.92 -37.54 REMARK 500 THR B 69 -53.82 18.61 REMARK 500 ASP C 46 -161.27 -127.19 REMARK 500 ASP C 64 43.56 -98.33 REMARK 500 LYS D 19 -19.73 -49.81 REMARK 500 ASP D 46 -173.86 -170.32 REMARK 500 PRO D 62 33.37 -56.25 REMARK 500 ALA D 63 -58.16 68.86 REMARK 500 ASP D 64 43.87 -63.93 REMARK 500 VAL D 65 132.98 178.68 REMARK 500 ASP D 66 120.03 165.56 REMARK 500 PRO D 67 -157.92 -38.00 REMARK 500 LEU D 68 -75.81 -24.48 REMARK 500 THR D 69 -58.07 30.88 REMARK 500 ASP D 77 32.00 -97.83 REMARK 500 LYS E 19 -14.98 -46.60 REMARK 500 HIS E 41 125.73 -171.97 REMARK 500 ASP E 46 3.83 -167.81 REMARK 500 GLU E 47 -67.13 97.52 REMARK 500 ASP E 64 43.98 -95.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B2004 DISTANCE = 7.55 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WJ5 RELATED DB: PDB REMARK 900 RAT ALPHA CRYSTALLIN DOMAIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE IS RESIDUES 67-157 PRECEDED BY A GAM TAG DBREF 2WJ7 A 1 3 PDB 2WJ7 2WJ7 1 3 DBREF 2WJ7 A 4 94 UNP P02511 CRYAB_HUMAN 67 157 DBREF 2WJ7 B 1 3 PDB 2WJ7 2WJ7 1 3 DBREF 2WJ7 B 4 94 UNP P02511 CRYAB_HUMAN 67 157 DBREF 2WJ7 C 1 3 PDB 2WJ7 2WJ7 1 3 DBREF 2WJ7 C 4 94 UNP P02511 CRYAB_HUMAN 67 157 DBREF 2WJ7 D 1 3 PDB 2WJ7 2WJ7 1 3 DBREF 2WJ7 D 4 94 UNP P02511 CRYAB_HUMAN 67 157 DBREF 2WJ7 E 1 3 PDB 2WJ7 2WJ7 1 3 DBREF 2WJ7 E 4 94 UNP P02511 CRYAB_HUMAN 67 157 SEQRES 1 A 94 GLY ALA MET GLU MET ARG LEU GLU LYS ASP ARG PHE SER SEQRES 2 A 94 VAL ASN LEU ASP VAL LYS HIS PHE SER PRO GLU GLU LEU SEQRES 3 A 94 LYS VAL LYS VAL LEU GLY ASP VAL ILE GLU VAL HIS GLY SEQRES 4 A 94 LYS HIS GLU GLU ARG GLN ASP GLU HIS GLY PHE ILE SER SEQRES 5 A 94 ARG GLU PHE HIS ARG LYS TYR ARG ILE PRO ALA ASP VAL SEQRES 6 A 94 ASP PRO LEU THR ILE THR SER SER LEU SER SER ASP GLY SEQRES 7 A 94 VAL LEU THR VAL ASN GLY PRO ARG LYS GLN VAL SER GLY SEQRES 8 A 94 PRO GLU ARG SEQRES 1 B 94 GLY ALA MET GLU MET ARG LEU GLU LYS ASP ARG PHE SER SEQRES 2 B 94 VAL ASN LEU ASP VAL LYS HIS PHE SER PRO GLU GLU LEU SEQRES 3 B 94 LYS VAL LYS VAL LEU GLY ASP VAL ILE GLU VAL HIS GLY SEQRES 4 B 94 LYS HIS GLU GLU ARG GLN ASP GLU HIS GLY PHE ILE SER SEQRES 5 B 94 ARG GLU PHE HIS ARG LYS TYR ARG ILE PRO ALA ASP VAL SEQRES 6 B 94 ASP PRO LEU THR ILE THR SER SER LEU SER SER ASP GLY SEQRES 7 B 94 VAL LEU THR VAL ASN GLY PRO ARG LYS GLN VAL SER GLY SEQRES 8 B 94 PRO GLU ARG SEQRES 1 C 94 GLY ALA MET GLU MET ARG LEU GLU LYS ASP ARG PHE SER SEQRES 2 C 94 VAL ASN LEU ASP VAL LYS HIS PHE SER PRO GLU GLU LEU SEQRES 3 C 94 LYS VAL LYS VAL LEU GLY ASP VAL ILE GLU VAL HIS GLY SEQRES 4 C 94 LYS HIS GLU GLU ARG GLN ASP GLU HIS GLY PHE ILE SER SEQRES 5 C 94 ARG GLU PHE HIS ARG LYS TYR ARG ILE PRO ALA ASP VAL SEQRES 6 C 94 ASP PRO LEU THR ILE THR SER SER LEU SER SER ASP GLY SEQRES 7 C 94 VAL LEU THR VAL ASN GLY PRO ARG LYS GLN VAL SER GLY SEQRES 8 C 94 PRO GLU ARG SEQRES 1 D 94 GLY ALA MET GLU MET ARG LEU GLU LYS ASP ARG PHE SER SEQRES 2 D 94 VAL ASN LEU ASP VAL LYS HIS PHE SER PRO GLU GLU LEU SEQRES 3 D 94 LYS VAL LYS VAL LEU GLY ASP VAL ILE GLU VAL HIS GLY SEQRES 4 D 94 LYS HIS GLU GLU ARG GLN ASP GLU HIS GLY PHE ILE SER SEQRES 5 D 94 ARG GLU PHE HIS ARG LYS TYR ARG ILE PRO ALA ASP VAL SEQRES 6 D 94 ASP PRO LEU THR ILE THR SER SER LEU SER SER ASP GLY SEQRES 7 D 94 VAL LEU THR VAL ASN GLY PRO ARG LYS GLN VAL SER GLY SEQRES 8 D 94 PRO GLU ARG SEQRES 1 E 94 GLY ALA MET GLU MET ARG LEU GLU LYS ASP ARG PHE SER SEQRES 2 E 94 VAL ASN LEU ASP VAL LYS HIS PHE SER PRO GLU GLU LEU SEQRES 3 E 94 LYS VAL LYS VAL LEU GLY ASP VAL ILE GLU VAL HIS GLY SEQRES 4 E 94 LYS HIS GLU GLU ARG GLN ASP GLU HIS GLY PHE ILE SER SEQRES 5 E 94 ARG GLU PHE HIS ARG LYS TYR ARG ILE PRO ALA ASP VAL SEQRES 6 E 94 ASP PRO LEU THR ILE THR SER SER LEU SER SER ASP GLY SEQRES 7 E 94 VAL LEU THR VAL ASN GLY PRO ARG LYS GLN VAL SER GLY SEQRES 8 E 94 PRO GLU ARG FORMUL 6 HOH *85(H2 O) HELIX 1 1 SER A 22 GLU A 24 5 3 HELIX 2 2 ASP A 66 ILE A 70 5 5 HELIX 3 3 SER B 22 GLU B 24 5 3 HELIX 4 4 SER C 22 GLU C 24 5 3 HELIX 5 5 ASP C 66 ILE C 70 5 5 HELIX 6 6 SER D 22 GLU D 24 5 3 HELIX 7 7 SER E 22 GLU E 24 5 3 HELIX 8 8 ASP E 66 ILE E 70 5 5 SHEET 1 AA 4 MET A 5 LEU A 7 0 SHEET 2 AA 4 ARG A 11 ASP A 17 -1 O SER A 13 N ARG A 6 SHEET 3 AA 4 VAL A 79 PRO A 85 -1 O LEU A 80 N LEU A 16 SHEET 4 AA 4 THR A 71 LEU A 74 -1 O THR A 71 N ASN A 83 SHEET 1 AB 6 LEU A 26 LEU A 31 0 SHEET 2 AB 6 VAL A 34 HIS A 41 -1 O VAL A 34 N LEU A 31 SHEET 3 AB 6 PHE A 50 ARG A 60 -1 O ARG A 53 N HIS A 41 SHEET 4 AB 6 PHE B 50 ARG B 60 -1 O PHE B 50 N LYS A 58 SHEET 5 AB 6 VAL B 34 HIS B 41 -1 O ILE B 35 N TYR B 59 SHEET 6 AB 6 LEU B 26 LEU B 31 -1 O LYS B 27 N HIS B 38 SHEET 1 BA 7 VAL B 14 ASP B 17 0 SHEET 2 BA 7 VAL B 79 ASN B 83 -1 O LEU B 80 N LEU B 16 SHEET 3 BA 7 THR B 71 SER B 75 -1 O THR B 71 N ASN B 83 SHEET 4 BA 7 THR C 71 SER C 75 -1 O LEU C 74 N LEU B 74 SHEET 5 BA 7 VAL C 79 PRO C 85 -1 O VAL C 79 N SER C 75 SHEET 6 BA 7 ARG C 11 ASP C 17 -1 O PHE C 12 N GLY C 84 SHEET 7 BA 7 MET C 5 LEU C 7 -1 O ARG C 6 N SER C 13 SHEET 1 CA 6 LEU C 26 VAL C 30 0 SHEET 2 CA 6 VAL C 34 GLN C 45 -1 O GLU C 36 N LYS C 29 SHEET 3 CA 6 PHE C 50 ARG C 60 -1 O ILE C 51 N ARG C 44 SHEET 4 CA 6 PHE D 50 ARG D 60 -1 O PHE D 50 N LYS C 58 SHEET 5 CA 6 VAL D 34 GLN D 45 -1 O ILE D 35 N TYR D 59 SHEET 6 CA 6 LEU D 26 LEU D 31 -1 O LYS D 27 N HIS D 38 SHEET 1 DA 6 ASN D 15 ASP D 17 0 SHEET 2 DA 6 VAL D 79 ASN D 83 -1 O LEU D 80 N LEU D 16 SHEET 3 DA 6 THR D 71 SER D 75 -1 O THR D 71 N ASN D 83 SHEET 4 DA 6 THR E 71 SER E 75 -1 O LEU E 74 N LEU D 74 SHEET 5 DA 6 VAL E 79 ASN E 83 -1 O VAL E 79 N SER E 75 SHEET 6 DA 6 SER E 13 ASP E 17 -1 O VAL E 14 N VAL E 82 SHEET 1 EA 3 LEU E 26 LEU E 31 0 SHEET 2 EA 3 VAL E 34 GLN E 45 -1 O VAL E 34 N LEU E 31 SHEET 3 EA 3 PHE E 50 ARG E 60 -1 O ILE E 51 N ARG E 44 CISPEP 1 VAL B 65 ASP B 66 0 -9.76 CISPEP 2 VAL D 65 ASP D 66 0 -6.12 CRYST1 49.460 66.070 190.970 90.00 92.68 90.00 C 1 2 1 20 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020218 0.000000 0.000946 0.00000 SCALE2 0.000000 0.015135 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005242 0.00000 MTRIX1 1 -0.531000 0.834000 0.149000 24.54846 1 MTRIX2 1 0.836000 0.486000 0.257000 -19.67877 1 MTRIX3 1 0.142000 0.261000 -0.955000 34.96871 1 MTRIX1 2 0.284270 0.948820 0.137590 4.76706 1 MTRIX2 2 -0.951030 0.297240 -0.084830 23.91140 1 MTRIX3 2 -0.121390 -0.106740 0.986850 40.89516 1 MTRIX1 3 0.672050 0.717580 0.182850 -2.80537 1 MTRIX2 3 0.729430 -0.684040 0.003490 -7.61084 1 MTRIX3 3 0.127580 0.131030 -0.983130 74.04976 1 MTRIX1 4 -0.876690 0.479500 0.038640 35.02455 1 MTRIX2 4 -0.476440 -0.854400 -0.207370 21.46771 1 MTRIX3 4 -0.066410 -0.200210 0.977500 78.21479 1 MASTER 568 0 0 8 32 0 0 18 0 0 0 40 END