HEADER STRUCTURAL PROTEIN 02-DEC-08 2W4S TITLE NOVEL RNA-BINDING DOMAIN IN CRYPTOSPORIDIUM PARVUM AT 2.5 TITLE 2 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANKYRIN-REPEAT PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: RNA-BINDING DOMAIN, RESIDUES 387-496; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPTOSPORIDIUM PARVUM; SOURCE 3 ORGANISM_TAXID: 414452; SOURCE 4 STRAIN: IOWA; SOURCE 5 ATCC: PRA-67D; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: ORIGAMI; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PROEXHTB KEYWDS RNA TRANSPORT, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.VARROT,C.MACKERETH,A.MOURAO,M.SATTLER,S.CUSACK REVDAT 4 13-JUL-11 2W4S 1 VERSN REVDAT 3 02-JUN-10 2W4S 1 JRNL REVDAT 2 12-MAY-10 2W4S 1 JRNL REMARK FORMUL HELIX REVDAT 2 2 MASTER REVDAT 1 29-DEC-09 2W4S 0 JRNL AUTH A.MOURAO,A.VARROT,C.MACKERETH,S.CUSACK,M.SATTLER JRNL TITL STRUCTURE AND RNA RECOGNITION BY THE SNRNA AND SNORNA JRNL TITL 2 TRANSPORT FACTOR PHAX. JRNL REF RNA V. 16 1205 2010 JRNL REFN ISSN 1355-8382 JRNL PMID 20430857 JRNL DOI 10.1261/RNA.2009910 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 3 NUMBER OF REFLECTIONS : 14569 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 769 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.51 REMARK 3 REFLECTION IN BIN (WORKING SET) : 743 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2080 REMARK 3 BIN FREE R VALUE SET COUNT : 49 REMARK 3 BIN FREE R VALUE : 0.2850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2728 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 92 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.35000 REMARK 3 B22 (A**2) : 0.68000 REMARK 3 B33 (A**2) : -1.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.45000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.476 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.287 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.201 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.557 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2811 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3774 ; 1.468 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 343 ; 6.344 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 127 ;42.272 ;24.961 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 567 ;19.548 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;18.776 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 450 ; 0.131 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2000 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1311 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1972 ; 0.306 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 105 ; 0.149 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 51 ; 0.223 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.094 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1772 ; 0.702 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2782 ; 1.271 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1165 ; 1.933 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 992 ; 3.244 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 388 A 475 6 REMARK 3 1 C 388 C 475 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 694 ; 0.50 ; 5.00 REMARK 3 LOOSE POSITIONAL 1 C (A): 694 ; 0.50 ; 5.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 694 ; 1.84 ; 10.00 REMARK 3 LOOSE THERMAL 1 C (A**2): 694 ; 1.84 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : B D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 389 B 475 6 REMARK 3 1 D 389 D 475 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 2 B (A): 678 ; 0.44 ; 5.00 REMARK 3 LOOSE POSITIONAL 2 D (A): 678 ; 0.44 ; 5.00 REMARK 3 LOOSE THERMAL 2 B (A**2): 678 ; 1.68 ; 10.00 REMARK 3 LOOSE THERMAL 2 D (A**2): 678 ; 1.68 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 388 B 475 REMARK 3 ORIGIN FOR THE GROUP (A): 6.6810 27.4100 36.6900 REMARK 3 T TENSOR REMARK 3 T11: 0.0591 T22: -0.0930 REMARK 3 T33: -0.1811 T12: 0.0205 REMARK 3 T13: -0.0324 T23: -0.0207 REMARK 3 L TENSOR REMARK 3 L11: 2.7923 L22: 3.2235 REMARK 3 L33: 4.5415 L12: -0.7832 REMARK 3 L13: 0.2797 L23: 1.5026 REMARK 3 S TENSOR REMARK 3 S11: -0.0372 S12: 0.2992 S13: 0.1344 REMARK 3 S21: -0.3346 S22: -0.1430 S23: 0.0727 REMARK 3 S31: -0.2770 S32: -0.5228 S33: 0.1802 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 388 C 475 REMARK 3 ORIGIN FOR THE GROUP (A): 18.3390 23.5450 109.6360 REMARK 3 T TENSOR REMARK 3 T11: -0.0021 T22: -0.0425 REMARK 3 T33: -0.2123 T12: 0.0572 REMARK 3 T13: 0.0301 T23: 0.0373 REMARK 3 L TENSOR REMARK 3 L11: 2.9198 L22: 2.8867 REMARK 3 L33: 5.4623 L12: 1.1255 REMARK 3 L13: 1.1118 L23: -0.3784 REMARK 3 S TENSOR REMARK 3 S11: 0.0627 S12: -0.0521 S13: 0.1743 REMARK 3 S21: 0.0583 S22: -0.2561 S23: 0.0016 REMARK 3 S31: -0.3888 S32: 0.1347 S33: 0.1934 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 388 D 475 REMARK 3 ORIGIN FOR THE GROUP (A): 27.0090 30.2180 88.0180 REMARK 3 T TENSOR REMARK 3 T11: 0.0597 T22: 0.1692 REMARK 3 T33: -0.1322 T12: 0.0877 REMARK 3 T13: 0.0639 T23: 0.1290 REMARK 3 L TENSOR REMARK 3 L11: 2.6780 L22: 4.7930 REMARK 3 L33: 3.9536 L12: -1.0840 REMARK 3 L13: 0.0464 L23: -2.5315 REMARK 3 S TENSOR REMARK 3 S11: 0.0940 S12: 0.1547 S13: -0.1364 REMARK 3 S21: -0.1938 S22: -0.4391 S23: -0.2547 REMARK 3 S31: 0.2007 S32: 0.9016 S33: 0.3451 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 2W4S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-DEC-08. REMARK 100 THE PDBE ID CODE IS EBI-27414. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14569 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.45 REMARK 200 RESOLUTION RANGE LOW (A) : 20.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 200 DATA REDUNDANCY : 4.6 REMARK 200 R MERGE (I) : 0.07 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.40 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.2 REMARK 200 R MERGE FOR SHELL (I) : 0.33 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.20 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PARTIAL MODEL IN ANOTHER SPACE GROUP REMARK 200 REMARK 200 REMARK: PHASES WERE OBTAINED BY MAD WITH SELENOMETHIONYL REMARK 200 SUBSTITUTED PROTEIN AND A PARTIAL MODEL WAS BUILD. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2M NA/K TARTRATE, 100 MM REMARK 280 BIS-TRIS PH 5.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.43100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 384 REMARK 465 ALA A 385 REMARK 465 MET A 386 REMARK 465 GLU A 403 REMARK 465 PRO A 404 REMARK 465 LYS A 405 REMARK 465 GLU A 476 REMARK 465 GLU A 477 REMARK 465 LYS A 478 REMARK 465 GLU A 479 REMARK 465 ARG A 480 REMARK 465 ILE A 481 REMARK 465 ASN A 482 REMARK 465 ALA A 483 REMARK 465 LYS A 484 REMARK 465 ASN A 485 REMARK 465 ILE A 486 REMARK 465 LEU A 487 REMARK 465 LYS A 488 REMARK 465 ARG A 489 REMARK 465 ASN A 490 REMARK 465 ASN A 491 REMARK 465 ARG A 492 REMARK 465 ARG A 493 REMARK 465 CYS A 494 REMARK 465 GLN A 495 REMARK 465 VAL A 496 REMARK 465 GLY B 384 REMARK 465 ALA B 385 REMARK 465 MET B 386 REMARK 465 ASP B 387 REMARK 465 GLU B 403 REMARK 465 PRO B 404 REMARK 465 LYS B 405 REMARK 465 GLU B 476 REMARK 465 GLU B 477 REMARK 465 LYS B 478 REMARK 465 GLU B 479 REMARK 465 ARG B 480 REMARK 465 ILE B 481 REMARK 465 ASN B 482 REMARK 465 ALA B 483 REMARK 465 LYS B 484 REMARK 465 ASN B 485 REMARK 465 ILE B 486 REMARK 465 LEU B 487 REMARK 465 LYS B 488 REMARK 465 ARG B 489 REMARK 465 ASN B 490 REMARK 465 ASN B 491 REMARK 465 ARG B 492 REMARK 465 ARG B 493 REMARK 465 CYS B 494 REMARK 465 GLN B 495 REMARK 465 VAL B 496 REMARK 465 GLY C 384 REMARK 465 ALA C 385 REMARK 465 MET C 386 REMARK 465 GLU C 403 REMARK 465 PRO C 404 REMARK 465 LYS C 405 REMARK 465 GLU C 476 REMARK 465 GLU C 477 REMARK 465 LYS C 478 REMARK 465 GLU C 479 REMARK 465 ARG C 480 REMARK 465 ILE C 481 REMARK 465 ASN C 482 REMARK 465 ALA C 483 REMARK 465 LYS C 484 REMARK 465 ASN C 485 REMARK 465 ILE C 486 REMARK 465 LEU C 487 REMARK 465 LYS C 488 REMARK 465 ARG C 489 REMARK 465 ASN C 490 REMARK 465 ASN C 491 REMARK 465 ARG C 492 REMARK 465 ARG C 493 REMARK 465 CYS C 494 REMARK 465 GLN C 495 REMARK 465 VAL C 496 REMARK 465 GLY D 384 REMARK 465 ALA D 385 REMARK 465 MET D 386 REMARK 465 GLU D 403 REMARK 465 PRO D 404 REMARK 465 LYS D 405 REMARK 465 GLU D 476 REMARK 465 GLU D 477 REMARK 465 LYS D 478 REMARK 465 GLU D 479 REMARK 465 ARG D 480 REMARK 465 ILE D 481 REMARK 465 ASN D 482 REMARK 465 ALA D 483 REMARK 465 LYS D 484 REMARK 465 ASN D 485 REMARK 465 ILE D 486 REMARK 465 LEU D 487 REMARK 465 LYS D 488 REMARK 465 ARG D 489 REMARK 465 ASN D 490 REMARK 465 ASN D 491 REMARK 465 ARG D 492 REMARK 465 ARG D 493 REMARK 465 CYS D 494 REMARK 465 GLN D 495 REMARK 465 VAL D 496 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR C 388 -32.56 -132.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 LYS C 406 12.2 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR PROVIDED. DBREF 2W4S A 384 386 PDB 2W4S 2W4S 384 386 DBREF 2W4S A 387 496 UNP Q7YZ62 Q7YZ62_CRYPV 387 496 DBREF 2W4S B 384 386 PDB 2W4S 2W4S 384 386 DBREF 2W4S B 387 496 UNP Q7YZ62 Q7YZ62_CRYPV 387 496 DBREF 2W4S C 384 386 PDB 2W4S 2W4S 384 386 DBREF 2W4S C 387 496 UNP Q7YZ62 Q7YZ62_CRYPV 387 496 DBREF 2W4S D 384 386 PDB 2W4S 2W4S 384 386 DBREF 2W4S D 387 496 UNP Q7YZ62 Q7YZ62_CRYPV 387 496 SEQRES 1 A 113 GLY ALA MET ASP THR MET GLU SER ILE VAL LEU ASN THR SEQRES 2 A 113 ILE VAL THR GLY LEU GLN GLU PRO LYS LYS GLU PHE ILE SEQRES 3 A 113 ALA ARG VAL ILE LYS THR ILE GLY SER GLN ARG SER LEU SEQRES 4 A 113 GLN LEU TYR GLU ASN ALA MET LYS VAL GLU ASN SER GLY SEQRES 5 A 113 GLY LEU LEU THR ALA ASP MET SER ARG ARG LYS THR ILE SEQRES 6 A 113 GLY GLY VAL PHE CYS TYR LEU LEU LYS GLN LEU VAL ALA SEQRES 7 A 113 GLU ASP GLN ILE THR ILE GLN GLU TRP ASN TYR ILE ARG SEQRES 8 A 113 GLN GLU GLU LYS GLU ARG ILE ASN ALA LYS ASN ILE LEU SEQRES 9 A 113 LYS ARG ASN ASN ARG ARG CYS GLN VAL SEQRES 1 B 113 GLY ALA MET ASP THR MET GLU SER ILE VAL LEU ASN THR SEQRES 2 B 113 ILE VAL THR GLY LEU GLN GLU PRO LYS LYS GLU PHE ILE SEQRES 3 B 113 ALA ARG VAL ILE LYS THR ILE GLY SER GLN ARG SER LEU SEQRES 4 B 113 GLN LEU TYR GLU ASN ALA MET LYS VAL GLU ASN SER GLY SEQRES 5 B 113 GLY LEU LEU THR ALA ASP MET SER ARG ARG LYS THR ILE SEQRES 6 B 113 GLY GLY VAL PHE CYS TYR LEU LEU LYS GLN LEU VAL ALA SEQRES 7 B 113 GLU ASP GLN ILE THR ILE GLN GLU TRP ASN TYR ILE ARG SEQRES 8 B 113 GLN GLU GLU LYS GLU ARG ILE ASN ALA LYS ASN ILE LEU SEQRES 9 B 113 LYS ARG ASN ASN ARG ARG CYS GLN VAL SEQRES 1 C 113 GLY ALA MET ASP THR MET GLU SER ILE VAL LEU ASN THR SEQRES 2 C 113 ILE VAL THR GLY LEU GLN GLU PRO LYS LYS GLU PHE ILE SEQRES 3 C 113 ALA ARG VAL ILE LYS THR ILE GLY SER GLN ARG SER LEU SEQRES 4 C 113 GLN LEU TYR GLU ASN ALA MET LYS VAL GLU ASN SER GLY SEQRES 5 C 113 GLY LEU LEU THR ALA ASP MET SER ARG ARG LYS THR ILE SEQRES 6 C 113 GLY GLY VAL PHE CYS TYR LEU LEU LYS GLN LEU VAL ALA SEQRES 7 C 113 GLU ASP GLN ILE THR ILE GLN GLU TRP ASN TYR ILE ARG SEQRES 8 C 113 GLN GLU GLU LYS GLU ARG ILE ASN ALA LYS ASN ILE LEU SEQRES 9 C 113 LYS ARG ASN ASN ARG ARG CYS GLN VAL SEQRES 1 D 113 GLY ALA MET ASP THR MET GLU SER ILE VAL LEU ASN THR SEQRES 2 D 113 ILE VAL THR GLY LEU GLN GLU PRO LYS LYS GLU PHE ILE SEQRES 3 D 113 ALA ARG VAL ILE LYS THR ILE GLY SER GLN ARG SER LEU SEQRES 4 D 113 GLN LEU TYR GLU ASN ALA MET LYS VAL GLU ASN SER GLY SEQRES 5 D 113 GLY LEU LEU THR ALA ASP MET SER ARG ARG LYS THR ILE SEQRES 6 D 113 GLY GLY VAL PHE CYS TYR LEU LEU LYS GLN LEU VAL ALA SEQRES 7 D 113 GLU ASP GLN ILE THR ILE GLN GLU TRP ASN TYR ILE ARG SEQRES 8 D 113 GLN GLU GLU LYS GLU ARG ILE ASN ALA LYS ASN ILE LEU SEQRES 9 D 113 LYS ARG ASN ASN ARG ARG CYS GLN VAL FORMUL 5 HOH *92(H2 O) HELIX 1 1 MET A 389 LEU A 401 1 13 HELIX 2 2 GLU A 407 ILE A 416 1 10 HELIX 3 3 SER A 418 SER A 434 1 17 HELIX 4 4 ILE A 448 GLU A 462 1 15 HELIX 5 5 ILE A 467 ARG A 474 1 8 HELIX 6 6 MET B 389 LEU B 401 1 13 HELIX 7 7 GLU B 407 ILE B 416 1 10 HELIX 8 8 SER B 418 SER B 434 1 17 HELIX 9 9 ILE B 448 GLU B 462 1 15 HELIX 10 10 ILE B 467 ARG B 474 1 8 HELIX 11 11 MET C 389 LEU C 401 1 13 HELIX 12 12 GLU C 407 ILE C 416 1 10 HELIX 13 13 SER C 418 SER C 434 1 17 HELIX 14 14 ILE C 448 GLU C 462 1 15 HELIX 15 15 ILE C 467 ARG C 474 1 8 HELIX 16 16 MET D 389 LEU D 401 1 13 HELIX 17 17 GLU D 407 ILE D 416 1 10 HELIX 18 18 SER D 418 SER D 434 1 17 HELIX 19 19 ILE D 448 GLU D 462 1 15 HELIX 20 20 ILE D 467 ARG D 474 1 8 SHEET 1 BA 2 LEU B 437 THR B 439 0 SHEET 2 BA 2 MET B 442 ARG B 445 -1 O ARG B 445 N LEU B 437 SHEET 1 DA 2 LEU D 437 THR D 439 0 SHEET 2 DA 2 MET D 442 ARG D 445 -1 O ARG D 445 N LEU D 437 CRYST1 42.180 52.862 99.315 90.00 94.05 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023708 0.000000 0.001679 0.00000 SCALE2 0.000000 0.018917 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010094 0.00000 MTRIX1 1 -0.989000 0.019000 -0.143000 1.00148 1 MTRIX2 1 -0.018000 -1.000000 -0.014000 1.11596 1 MTRIX3 1 -0.144000 -0.011000 0.990000 -0.46691 1 MASTER 475 0 0 20 4 0 0 9 0 0 0 36 END