HEADER STRUCTURAL PROTEIN 07-JUN-07 2V2U TITLE STRUCTURE OF MOUSE GAMMAC-CRYSTALLIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GAMMA CRYSTALLIN C; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GAMMAC-CRYSTALLIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 ORGAN: EYE; SOURCE 6 TISSUE: LENS; SOURCE 7 CELL: FIBER; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 11 EXPRESSION_SYSTEM_VARIANT: PLYS; SOURCE 12 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 13 EXPRESSION_SYSTEM_VECTOR: PET3A KEYWDS STRUCTURAL PROTEIN, EYE LENS PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.G.PURKISS,O.A.BATEMAN,K.WYATT,L.L.DAVID,G.J.WISTOW,C.SLINGSBY REVDAT 5 04-DEC-13 2V2U 1 SOURCE AUTHOR REMARK REVDAT 4 13-JUL-11 2V2U 1 VERSN REVDAT 3 24-FEB-09 2V2U 1 VERSN REVDAT 2 28-AUG-07 2V2U 1 JRNL REVDAT 1 19-JUN-07 2V2U 0 JRNL AUTH A.G.PURKISS,O.A.BATEMAN,K.WYATT,L.L.DAVID,G.J.WISTOW, JRNL AUTH 2 C.SLINGSBY JRNL TITL EVOLUTIONARY ADAPTATION OF HUMAN AND MOUSE EYE LENS JRNL TITL 2 GAMMAC-CRYSTALLINS FOR SOLUBILITY AND STABILITY: JRNL TITL 3 FINE-TUNING OF MOLECULAR DIPOLES. JRNL REF J.MOL.BIOL. V. 372 205 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17659303 JRNL DOI 10.1016/J.JMB.2007.06.049 REMARK 2 REMARK 2 RESOLUTION. 1.9 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.07 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 3 NUMBER OF REFLECTIONS : 21170 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1149 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1050 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2910 REMARK 3 BIN FREE R VALUE SET COUNT : 74 REMARK 3 BIN FREE R VALUE : 0.3960 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2978 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 136 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.01000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.244 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.208 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.177 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.793 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3062 ; 0.012 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4125 ; 1.511 ; 1.936 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 358 ; 6.599 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 178 ;32.818 ;22.135 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 528 ;18.300 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;24.112 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 390 ; 0.128 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2448 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1340 ; 0.204 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1977 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 154 ; 0.187 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 50 ; 0.192 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 18 ; 0.261 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1827 ; 0.643 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2835 ; 0.999 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1450 ; 1.687 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1288 ; 2.564 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 80 REMARK 3 RESIDUE RANGE : A 200 A 200 REMARK 3 ORIGIN FOR THE GROUP (A): 4.7652 -1.7030 -0.6916 REMARK 3 T TENSOR REMARK 3 T11: -0.1570 T22: -0.0614 REMARK 3 T33: -0.0699 T12: -0.0258 REMARK 3 T13: -0.0158 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 3.9190 L22: 6.7928 REMARK 3 L33: 3.2345 L12: -1.8757 REMARK 3 L13: -0.3213 L23: 0.9223 REMARK 3 S TENSOR REMARK 3 S11: 0.0264 S12: -0.2965 S13: 0.3180 REMARK 3 S21: 0.1653 S22: 0.0283 S23: -0.0188 REMARK 3 S31: -0.1017 S32: -0.0891 S33: -0.0547 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 87 A 171 REMARK 3 ORIGIN FOR THE GROUP (A): 17.7646 -17.3692 -13.5413 REMARK 3 T TENSOR REMARK 3 T11: -0.0596 T22: -0.0817 REMARK 3 T33: -0.0798 T12: 0.0017 REMARK 3 T13: -0.0209 T23: 0.0320 REMARK 3 L TENSOR REMARK 3 L11: 2.0233 L22: 3.1685 REMARK 3 L33: 3.3725 L12: -1.0487 REMARK 3 L13: -0.3061 L23: 0.0796 REMARK 3 S TENSOR REMARK 3 S11: 0.0755 S12: -0.0057 S13: -0.0090 REMARK 3 S21: -0.2523 S22: 0.0395 S23: -0.0510 REMARK 3 S31: 0.0954 S32: 0.0283 S33: -0.1150 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 80 REMARK 3 ORIGIN FOR THE GROUP (A): 0.8490 -9.2502 -34.9508 REMARK 3 T TENSOR REMARK 3 T11: -0.1343 T22: -0.1595 REMARK 3 T33: -0.0640 T12: -0.0859 REMARK 3 T13: 0.0025 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 7.9333 L22: 7.1959 REMARK 3 L33: 8.0097 L12: -2.2825 REMARK 3 L13: -1.2466 L23: 4.5849 REMARK 3 S TENSOR REMARK 3 S11: 0.0861 S12: -0.1201 S13: -0.2140 REMARK 3 S21: 0.1273 S22: 0.2749 S23: -0.5433 REMARK 3 S31: 0.5423 S32: 0.0298 S33: -0.3610 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 87 B 171 REMARK 3 ORIGIN FOR THE GROUP (A): -9.5997 8.9372 -22.9717 REMARK 3 T TENSOR REMARK 3 T11: -0.0904 T22: -0.0463 REMARK 3 T33: -0.0603 T12: 0.0004 REMARK 3 T13: 0.0081 T23: 0.0346 REMARK 3 L TENSOR REMARK 3 L11: 3.1645 L22: 3.9082 REMARK 3 L33: 4.8584 L12: -0.6200 REMARK 3 L13: -1.0986 L23: 1.8215 REMARK 3 S TENSOR REMARK 3 S11: -0.0911 S12: 0.1145 S13: 0.2055 REMARK 3 S21: -0.0639 S22: 0.1500 S23: -0.1423 REMARK 3 S31: -0.2062 S32: -0.1393 S33: -0.0589 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 2V2U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-JUN-07. REMARK 100 THE PDBE ID CODE IS EBI-31998. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.873 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28779 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.90 REMARK 200 RESOLUTION RANGE LOW (A) : 43.10 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 200 DATA REDUNDANCY : 1.9 REMARK 200 R MERGE (I) : 0.10 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.20 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.1 REMARK 200 DATA REDUNDANCY IN SHELL : 1.9 REMARK 200 R MERGE FOR SHELL (I) : 0.62 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.80 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1HK0 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM ACETATE, 0.1 M REMARK 280 SODIUM CACODYLATE PH 6.5 AND 30% PEG 8000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 2 CE NZ REMARK 470 ARG A 9 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N GLY A 1 O HOH A 2001 2.05 REMARK 500 NH1 ARG B 152 O HOH B 2044 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 146 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 24 99.67 -167.23 REMARK 500 CYS A 110 88.41 -154.02 REMARK 500 HIS A 116 51.01 -116.57 REMARK 500 GLN A 148 172.66 169.72 REMARK 500 LYS B 2 77.03 79.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 LYS B 2 16.1 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL DBREF 2V2U A 1 173 UNP Q61597 CRGC_MOUSE 2 174 DBREF 2V2U B 1 173 UNP Q61597 CRGC_MOUSE 2 174 SEQRES 1 A 173 GLY LYS ILE THR PHE PHE GLU ASP ARG SER PHE GLN GLY SEQRES 2 A 173 ARG CYS TYR GLU CYS SER SER ASP CYS PRO ASN LEU GLN SEQRES 3 A 173 THR TYR PHE SER ARG CYS ASN SER VAL ARG VAL ASP SER SEQRES 4 A 173 GLY CYS TRP MET LEU TYR GLU ARG PRO ASN TYR GLN GLY SEQRES 5 A 173 HIS GLN TYR PHE LEU ARG ARG GLY GLU TYR PRO ASP TYR SEQRES 6 A 173 GLN GLN TRP MET GLY PHE SER ASP SER ILE ARG SER CYS SEQRES 7 A 173 ARG LEU ILE PRO HIS ALA GLY SER HIS ARG MET ARG LEU SEQRES 8 A 173 TYR GLU LYS GLU ASP HIS LYS GLY VAL MET MET GLU LEU SEQRES 9 A 173 SER GLU ASP CYS SER CYS ILE GLN ASP ARG PHE HIS LEU SEQRES 10 A 173 SER GLU VAL ARG SER LEU GLN VAL LEU GLU GLY CYS TRP SEQRES 11 A 173 VAL LEU TYR GLU MET PRO ASN TYR ARG GLY ARG GLN TYR SEQRES 12 A 173 LEU LEU ARG PRO GLN GLU TYR ARG ARG PHE GLN ASP TRP SEQRES 13 A 173 GLY SER VAL ASP ALA LYS ALA GLY SER LEU ARG ARG VAL SEQRES 14 A 173 VAL ASP LEU TYR SEQRES 1 B 173 GLY LYS ILE THR PHE PHE GLU ASP ARG SER PHE GLN GLY SEQRES 2 B 173 ARG CYS TYR GLU CYS SER SER ASP CYS PRO ASN LEU GLN SEQRES 3 B 173 THR TYR PHE SER ARG CYS ASN SER VAL ARG VAL ASP SER SEQRES 4 B 173 GLY CYS TRP MET LEU TYR GLU ARG PRO ASN TYR GLN GLY SEQRES 5 B 173 HIS GLN TYR PHE LEU ARG ARG GLY GLU TYR PRO ASP TYR SEQRES 6 B 173 GLN GLN TRP MET GLY PHE SER ASP SER ILE ARG SER CYS SEQRES 7 B 173 ARG LEU ILE PRO HIS ALA GLY SER HIS ARG MET ARG LEU SEQRES 8 B 173 TYR GLU LYS GLU ASP HIS LYS GLY VAL MET MET GLU LEU SEQRES 9 B 173 SER GLU ASP CYS SER CYS ILE GLN ASP ARG PHE HIS LEU SEQRES 10 B 173 SER GLU VAL ARG SER LEU GLN VAL LEU GLU GLY CYS TRP SEQRES 11 B 173 VAL LEU TYR GLU MET PRO ASN TYR ARG GLY ARG GLN TYR SEQRES 12 B 173 LEU LEU ARG PRO GLN GLU TYR ARG ARG PHE GLN ASP TRP SEQRES 13 B 173 GLY SER VAL ASP ALA LYS ALA GLY SER LEU ARG ARG VAL SEQRES 14 B 173 VAL ASP LEU TYR FORMUL 3 HOH *136(H2 O) HELIX 1 1 ASP A 64 MET A 69 5 6 HELIX 2 2 GLU A 95 HIS A 97 5 3 HELIX 3 3 CYS A 110 PHE A 115 1 6 HELIX 4 4 ARG A 152 TRP A 156 5 5 HELIX 5 5 ASP B 8 GLN B 12 5 5 HELIX 6 6 ASN B 24 TYR B 28 5 5 HELIX 7 7 PRO B 48 TYR B 50 5 3 HELIX 8 8 ASP B 64 MET B 69 5 6 HELIX 9 9 CYS B 110 HIS B 116 1 7 HELIX 10 10 PRO B 136 TYR B 138 5 3 HELIX 11 11 ARG B 152 GLY B 157 5 6 SHEET 1 AA 4 GLN A 12 CYS A 18 0 SHEET 2 AA 4 LYS A 2 ASP A 8 -1 O ILE A 3 N CYS A 18 SHEET 3 AA 4 SER A 34 SER A 39 -1 O SER A 34 N PHE A 6 SHEET 4 AA 4 GLY A 60 TYR A 62 -1 O GLY A 60 N VAL A 37 SHEET 1 AB 3 GLN A 51 LEU A 57 0 SHEET 2 AB 3 CYS A 41 ARG A 47 -1 O TRP A 42 N LEU A 57 SHEET 3 AB 3 SER A 77 ILE A 81 -1 O SER A 77 N TYR A 45 SHEET 1 AC 4 LYS A 98 LEU A 104 0 SHEET 2 AC 4 ARG A 88 LYS A 94 -1 O MET A 89 N LEU A 104 SHEET 3 AC 4 SER A 122 GLU A 127 -1 O SER A 122 N TYR A 92 SHEET 4 AC 4 GLN A 148 TYR A 150 -1 O GLN A 148 N VAL A 125 SHEET 1 AD 3 ARG A 139 LEU A 145 0 SHEET 2 AD 3 TRP A 130 MET A 135 -1 O TRP A 130 N LEU A 145 SHEET 3 AD 3 SER A 165 ARG A 168 -1 O SER A 165 N TYR A 133 SHEET 1 BA 4 CYS B 15 CYS B 18 0 SHEET 2 BA 4 ILE B 3 PHE B 6 -1 O ILE B 3 N CYS B 18 SHEET 3 BA 4 SER B 34 VAL B 37 -1 O SER B 34 N PHE B 6 SHEET 4 BA 4 GLY B 60 TYR B 62 -1 O GLY B 60 N VAL B 37 SHEET 1 BB 3 GLN B 51 LEU B 57 0 SHEET 2 BB 3 CYS B 41 ARG B 47 -1 O TRP B 42 N LEU B 57 SHEET 3 BB 3 SER B 77 ILE B 81 -1 O SER B 77 N TYR B 45 SHEET 1 BC 4 LYS B 98 LEU B 104 0 SHEET 2 BC 4 ARG B 88 LYS B 94 -1 O MET B 89 N LEU B 104 SHEET 3 BC 4 SER B 122 GLU B 127 -1 O SER B 122 N TYR B 92 SHEET 4 BC 4 GLU B 149 TYR B 150 -1 O TYR B 150 N LEU B 123 SHEET 1 BD 3 ARG B 139 LEU B 145 0 SHEET 2 BD 3 TRP B 130 MET B 135 -1 O TRP B 130 N LEU B 145 SHEET 3 BD 3 SER B 165 ARG B 168 -1 O SER B 165 N TYR B 133 SSBOND 1 CYS A 18 CYS A 22 1555 1555 2.05 CISPEP 1 GLY B 1 LYS B 2 0 -20.88 CRYST1 34.911 46.317 53.317 108.53 94.08 99.37 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028644 0.004727 0.003847 0.00000 SCALE2 0.000000 0.021882 0.007772 0.00000 SCALE3 0.000000 0.000000 0.019954 0.00000 MASTER 379 0 0 11 28 0 0 6 0 0 0 28 END