HEADER TRANSFERASE 01-MAR-08 2RO0 TITLE SOLUTION STRUCTURE OF THE KNOTTED TUDOR DOMAIN OF THE YEAST TITLE 2 HISTONE ACETYLTRANSFERASE, ESA1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE ACETYLTRANSFERASE ESA1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-89; COMPND 5 EC: 2.3.1.48; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS ESA1, HAT, CHROMODOMAIN, TUDOR DOMAIN, RNA BINDING, KEYWDS 2 ACTIVATOR, CHROMATIN REGULATOR, TRANSCRIPTION, KEYWDS 3 TRANSCRIPTION REGULATION, TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.SHIMOJO,N.SANO,Y.MORIWAKI,M.OKUDA,M.HORIKOSHI,Y.NISHIMURA REVDAT 3 24-FEB-09 2RO0 1 VERSN REVDAT 2 03-JUN-08 2RO0 1 JRNL REVDAT 1 29-APR-08 2RO0 0 JRNL AUTH H.SHIMOJO,N.SANO,Y.MORIWAKI,M.OKUDA,M.HORIKOSHI, JRNL AUTH 2 Y.NISHIMURA JRNL TITL NOVEL STRUCTURAL AND FUNCTIONAL MODE OF A KNOT JRNL TITL 2 ESSENTIAL FOR RNA BINDING ACTIVITY OF THE ESA1 JRNL TITL 3 PRESUMED CHROMODOMAIN JRNL REF J.MOL.BIOL. V. 378 987 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18407291 JRNL DOI 10.1016/J.JMB.2008.03.021 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : P.GUNTERT ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RO0 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-MAR-08. REMARK 100 THE RCSB ID CODE IS RCSB150078. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 295 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.35MM CHROMODOMAIN [U-99% REMARK 210 13C; U-99% 15N], 200MM REMARK 210 POTASSIUM PHOSPHATE, 5MM D- REMARK 210 DTT, 95% H2O/5% D2O; 0.35MM REMARK 210 CHROMODOMAIN [U-99% 13C; U-99% REMARK 210 15N], 200MM POTASSIUM REMARK 210 PHOSPHATE, 5MM D-DTT, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC, 3D CBCA(CO) REMARK 210 NH, 3D HNCACB, 3D HNCO, 3D REMARK 210 HN(CO)CA, 2D 1H-13C HSQC, 3D REMARK 210 HCCH-TOCSY, 3D 1H-15N NOESY, REMARK 210 3D 1H-13C NOESY, 3D HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 800 MHZ, 900 MHZ REMARK 210 SPECTROMETER MODEL : DRX, INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER, VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : OLIVIA, NMRPIPE REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 600 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 9 -176.25 -69.74 REMARK 500 1 PRO A 50 -179.11 -69.74 REMARK 500 1 GLU A 65 -179.26 -172.45 REMARK 500 1 ASP A 87 61.50 -109.71 REMARK 500 2 HIS A 0 -52.10 -130.07 REMARK 500 2 HIS A 3 54.98 -118.48 REMARK 500 2 PRO A 50 -177.72 -69.76 REMARK 500 2 ASP A 87 46.73 -101.95 REMARK 500 3 THR A 45 65.17 -100.05 REMARK 500 3 PRO A 50 -178.89 -69.77 REMARK 500 4 PRO A 9 -176.03 -69.76 REMARK 500 4 ASN A 16 15.10 -140.02 REMARK 500 4 PRO A 50 -179.91 -69.78 REMARK 500 4 GLU A 65 -179.93 -176.61 REMARK 500 5 PRO A 50 -178.58 -69.78 REMARK 500 6 HIS A 0 72.71 -104.91 REMARK 500 6 HIS A 3 -66.23 -93.33 REMARK 500 6 PRO A 9 -170.86 -69.73 REMARK 500 6 PRO A 50 -178.78 -69.77 REMARK 500 7 PRO A 9 -178.80 -69.75 REMARK 500 7 PRO A 50 -178.12 -69.75 REMARK 500 7 GLU A 65 -175.58 -174.93 REMARK 500 7 ASP A 87 78.99 -105.57 REMARK 500 8 SER A 2 -178.12 -67.52 REMARK 500 8 PRO A 9 -177.48 -69.75 REMARK 500 8 PRO A 50 -178.10 -69.74 REMARK 500 8 GLU A 65 -178.58 -174.34 REMARK 500 9 MET A 1 108.49 -58.06 REMARK 500 9 LYS A 6 79.90 -118.43 REMARK 500 9 PRO A 9 -177.88 -69.75 REMARK 500 9 PRO A 50 -178.88 -69.79 REMARK 500 9 GLU A 65 -174.42 -174.44 REMARK 500 9 LYS A 84 82.54 51.40 REMARK 500 9 ALA A 85 69.28 -112.13 REMARK 500 10 THR A 45 60.19 -101.20 REMARK 500 10 GLU A 65 -174.66 -175.11 REMARK 500 10 GLU A 88 -55.64 -126.87 REMARK 500 11 PRO A 9 -172.03 -69.78 REMARK 500 11 PRO A 50 -177.70 -69.75 REMARK 500 11 TYR A 56 106.29 -57.31 REMARK 500 11 GLU A 65 -169.06 -163.44 REMARK 500 12 ASN A 16 14.37 -140.00 REMARK 500 12 THR A 45 53.68 -99.90 REMARK 500 12 GLU A 65 -179.65 -173.91 REMARK 500 12 ASP A 87 -55.67 -134.23 REMARK 500 12 GLU A 88 73.58 -105.20 REMARK 500 13 PRO A 9 -170.92 -69.75 REMARK 500 13 THR A 45 44.72 -99.76 REMARK 500 13 GLU A 65 -176.72 -174.98 REMARK 500 14 MET A 1 43.01 -105.88 REMARK 500 14 ASP A 4 -74.71 -103.27 REMARK 500 14 PRO A 9 -179.60 -69.80 REMARK 500 14 PRO A 50 -177.33 -69.75 REMARK 500 15 THR A 45 56.04 -99.87 REMARK 500 16 SER A -1 119.56 -166.11 REMARK 500 16 PRO A 9 -171.25 -69.79 REMARK 500 16 PRO A 50 -179.00 -69.79 REMARK 500 16 ASP A 87 69.97 -119.28 REMARK 500 17 PRO A 50 -178.48 -69.73 REMARK 500 17 TYR A 56 108.50 -56.23 REMARK 500 17 GLU A 65 -174.50 -176.19 REMARK 500 18 SER A -1 46.89 -103.47 REMARK 500 18 PRO A 9 -178.37 -69.79 REMARK 500 18 THR A 45 48.04 -99.63 REMARK 500 18 GLU A 65 -177.49 -172.84 REMARK 500 19 MET A 1 -70.02 -75.38 REMARK 500 19 HIS A 3 176.59 -56.95 REMARK 500 19 PRO A 9 -176.48 -69.79 REMARK 500 19 THR A 45 60.41 -102.62 REMARK 500 19 GLU A 65 -178.27 -170.83 REMARK 500 20 SER A -1 77.96 -100.32 REMARK 500 20 PRO A 9 -177.58 -69.77 REMARK 500 20 PRO A 50 -176.37 -69.79 REMARK 500 20 GLU A 65 -174.04 -175.59 REMARK 500 20 ASP A 87 58.31 -115.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2RNZ RELATED DB: PDB DBREF 2RO0 A 1 89 UNP Q08649 ESA1_YEAST 1 89 SEQADV 2RO0 GLY A -2 UNP Q08649 EXPRESSION TAG SEQADV 2RO0 SER A -1 UNP Q08649 EXPRESSION TAG SEQADV 2RO0 HIS A 0 UNP Q08649 EXPRESSION TAG SEQRES 1 A 92 GLY SER HIS MET SER HIS ASP GLY LYS GLU GLU PRO GLY SEQRES 2 A 92 ILE ALA LYS LYS ILE ASN SER VAL ASP ASP ILE ILE ILE SEQRES 3 A 92 LYS CYS GLN CYS TRP VAL GLN LYS ASN ASP GLU GLU ARG SEQRES 4 A 92 LEU ALA GLU ILE LEU SER ILE ASN THR ARG LYS ALA PRO SEQRES 5 A 92 PRO LYS PHE TYR VAL HIS TYR VAL ASN TYR ASN LYS ARG SEQRES 6 A 92 LEU ASP GLU TRP ILE THR THR ASP ARG ILE ASN LEU ASP SEQRES 7 A 92 LYS GLU VAL LEU TYR PRO LYS LEU LYS ALA THR ASP GLU SEQRES 8 A 92 ASP SHEET 1 A 2 ILE A 11 LYS A 13 0 SHEET 2 A 2 VAL A 78 TYR A 80 -1 O VAL A 78 N LYS A 13 SHEET 1 B 5 GLU A 65 THR A 68 0 SHEET 2 B 5 LYS A 51 TYR A 56 -1 N PHE A 52 O ILE A 67 SHEET 3 B 5 GLU A 34 ASN A 44 -1 N ASN A 44 O LYS A 51 SHEET 4 B 5 GLN A 26 LYS A 31 -1 N VAL A 29 O ARG A 36 SHEET 5 B 5 ILE A 72 ASN A 73 -1 O ASN A 73 N TRP A 28 CISPEP 1 ALA A 48 PRO A 49 1 0.01 CISPEP 2 ALA A 48 PRO A 49 2 -0.01 CISPEP 3 ALA A 48 PRO A 49 3 0.03 CISPEP 4 ALA A 48 PRO A 49 4 0.06 CISPEP 5 ALA A 48 PRO A 49 5 0.05 CISPEP 6 ALA A 48 PRO A 49 6 0.02 CISPEP 7 ALA A 48 PRO A 49 7 0.00 CISPEP 8 ALA A 48 PRO A 49 8 -0.03 CISPEP 9 ALA A 48 PRO A 49 9 0.03 CISPEP 10 ALA A 48 PRO A 49 10 0.08 CISPEP 11 ALA A 48 PRO A 49 11 0.11 CISPEP 12 ALA A 48 PRO A 49 12 0.07 CISPEP 13 ALA A 48 PRO A 49 13 -0.05 CISPEP 14 ALA A 48 PRO A 49 14 -0.01 CISPEP 15 ALA A 48 PRO A 49 15 0.12 CISPEP 16 ALA A 48 PRO A 49 16 0.07 CISPEP 17 ALA A 48 PRO A 49 17 -0.06 CISPEP 18 ALA A 48 PRO A 49 18 0.06 CISPEP 19 ALA A 48 PRO A 49 19 0.02 CISPEP 20 ALA A 48 PRO A 49 20 0.00 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 151 0 0 0 7 0 0 6 0 0 0 8 END