HEADER HYDROLASE 12-OCT-07 2RIP TITLE STRUCTURE OF DPPIV IN COMPLEX WITH AN INHIBITOR CAVEAT 2RIP NAG B 2 HAS WRONG CHIRALITY AT ATOM C1 MAN B 3 HAS WRONG CAVEAT 2 2RIP CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIPEPTIDYL PEPTIDASE 4; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DIPEPTIDYL PEPTIDASE IV; DPP IV; T-CELL ACTIVATION ANTIGEN COMPND 5 CD26; TP103; ADENOSINE DEAMINASE COMPLEXING PROTEIN 2; ADABP; COMPND 6 EC: 3.4.14.5; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DPPIV; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: BACULOVIRUS KEYWDS DPPIV, DIABETES, DRUG DESIGN, AMINOPEPTIDASE, GLYCOPROTEIN, KEYWDS 2 HYDROLASE, MEMBRANE, PROTEASE, SECRETED, SERINE PROTEASE, SIGNAL- KEYWDS 3 ANCHOR, TRANSMEMBRANE EXPDTA X-RAY DIFFRACTION AUTHOR X.QIU REVDAT 4 29-JUL-20 2RIP 1 CAVEAT COMPND REMARK HETNAM REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 13-JUL-11 2RIP 1 VERSN REVDAT 2 24-FEB-09 2RIP 1 VERSN REVDAT 1 18-MAR-08 2RIP 0 JRNL AUTH J.W.CORBETT,K.DIRICO,W.SONG,B.P.BOSCOE,S.D.DORAN,D.BOYER, JRNL AUTH 2 X.QIU,M.AMMIRATI,M.A.VANVOLKENBURG,R.K.MCPHERSON,J.C.PARKER, JRNL AUTH 3 E.D.COX JRNL TITL DESIGN AND SYNTHESIS OF POTENT AMIDO- AND BENZYL-SUBSTITUTED JRNL TITL 2 CIS-3-AMINO-4-(2-CYANOPYRROLIDIDE)PYRROLIDINYL DPP-IV JRNL TITL 3 INHIBITORS. JRNL REF BIOORG.MED.CHEM.LETT. V. 17 6707 2007 JRNL REFN ISSN 0960-894X JRNL PMID 17977724 JRNL DOI 10.1016/J.BMCL.2007.10.063 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.6 REMARK 3 NUMBER OF REFLECTIONS : 20047 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.293 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1095 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1170 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3050 REMARK 3 BIN FREE R VALUE SET COUNT : 75 REMARK 3 BIN FREE R VALUE : 0.4090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5972 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 159 REMARK 3 SOLVENT ATOMS : 27 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 69.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.53000 REMARK 3 B22 (A**2) : 1.53000 REMARK 3 B33 (A**2) : -3.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.496 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.372 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.972 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.911 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.845 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6319 ; 0.012 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8608 ; 1.399 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 728 ; 6.724 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 926 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4824 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2607 ; 0.229 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 192 ; 0.158 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 48 ; 0.226 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.203 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3632 ; 0.589 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5892 ; 1.129 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2687 ; 1.396 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2716 ; 2.440 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RIP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-FEB-08. REMARK 100 THE DEPOSITION ID IS D_1000044905. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JAN-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39722 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.12500 REMARK 200 R SYM (I) : 0.12500 REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.00580 REMARK 200 R SYM FOR SHELL (I) : 0.00580 REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1WCY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20%PEG, PH 8, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 204.61000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.61000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.61000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 306.91500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.61000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.61000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 102.30500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.61000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.61000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 306.91500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.61000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.61000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 102.30500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 204.61000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 61780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 49.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 138.44000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 138.44000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 204.61000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 96 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP A 171 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP A 243 CB - CG - OD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 ASP A 302 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 51 51.08 76.38 REMARK 500 SER A 64 -153.51 -157.37 REMARK 500 GLU A 73 -93.35 63.01 REMARK 500 ASN A 74 -2.69 -140.48 REMARK 500 ASN A 92 26.12 -79.27 REMARK 500 PHE A 98 -22.54 -151.20 REMARK 500 TYR A 105 147.90 -172.70 REMARK 500 PRO A 109 38.30 -68.41 REMARK 500 ASP A 110 20.48 -159.34 REMARK 500 GLN A 123 -100.35 -111.10 REMARK 500 TRP A 124 -149.89 -88.31 REMARK 500 PRO A 178 -1.04 -50.79 REMARK 500 ASN A 179 20.86 -149.39 REMARK 500 ASP A 192 -3.30 65.05 REMARK 500 VAL A 207 -56.80 -126.98 REMARK 500 SER A 242 -165.29 70.40 REMARK 500 VAL A 279 -47.65 -132.10 REMARK 500 ALA A 306 -62.69 -95.02 REMARK 500 GLN A 320 32.67 -75.27 REMARK 500 GLU A 332 -74.64 -52.86 REMARK 500 LYS A 423 16.20 53.51 REMARK 500 ASN A 450 34.62 -152.07 REMARK 500 PRO A 451 -34.82 -30.99 REMARK 500 ALA A 465 33.10 73.22 REMARK 500 PRO A 478 130.11 -32.60 REMARK 500 LEU A 491 -66.32 -94.44 REMARK 500 ASN A 520 44.99 35.74 REMARK 500 TYR A 547 -69.04 -132.82 REMARK 500 CYS A 551 32.08 73.22 REMARK 500 ARG A 596 10.49 46.46 REMARK 500 THR A 600 -79.63 -130.89 REMARK 500 SER A 630 -131.86 55.78 REMARK 500 GLU A 660 0.59 -66.86 REMARK 500 ARG A 669 -34.80 -37.93 REMARK 500 ASP A 678 -105.25 -92.72 REMARK 500 ASN A 685 0.26 -63.62 REMARK 500 ASN A 710 -71.50 -75.32 REMARK 500 ASP A 737 -6.22 72.25 REMARK 500 ASP A 739 -153.75 -99.60 REMARK 500 ILE A 742 60.46 33.04 REMARK 500 REMARK 500 REMARK: NULL DBREF 2RIP A 38 766 UNP P27487 DPP4_HUMAN 38 766 SEQRES 1 A 729 ASP SER ARG LYS THR TYR THR LEU THR ASP TYR LEU LYS SEQRES 2 A 729 ASN THR TYR ARG LEU LYS LEU TYR SER LEU ARG TRP ILE SEQRES 3 A 729 SER ASP HIS GLU TYR LEU TYR LYS GLN GLU ASN ASN ILE SEQRES 4 A 729 LEU VAL PHE ASN ALA GLU TYR GLY ASN SER SER VAL PHE SEQRES 5 A 729 LEU GLU ASN SER THR PHE ASP GLU PHE GLY HIS SER ILE SEQRES 6 A 729 ASN ASP TYR SER ILE SER PRO ASP GLY GLN PHE ILE LEU SEQRES 7 A 729 LEU GLU TYR ASN TYR VAL LYS GLN TRP ARG HIS SER TYR SEQRES 8 A 729 THR ALA SER TYR ASP ILE TYR ASP LEU ASN LYS ARG GLN SEQRES 9 A 729 LEU ILE THR GLU GLU ARG ILE PRO ASN ASN THR GLN TRP SEQRES 10 A 729 VAL THR TRP SER PRO VAL GLY HIS LYS LEU ALA TYR VAL SEQRES 11 A 729 TRP ASN ASN ASP ILE TYR VAL LYS ILE GLU PRO ASN LEU SEQRES 12 A 729 PRO SER TYR ARG ILE THR TRP THR GLY LYS GLU ASP ILE SEQRES 13 A 729 ILE TYR ASN GLY ILE THR ASP TRP VAL TYR GLU GLU GLU SEQRES 14 A 729 VAL PHE SER ALA TYR SER ALA LEU TRP TRP SER PRO ASN SEQRES 15 A 729 GLY THR PHE LEU ALA TYR ALA GLN PHE ASN ASP THR GLU SEQRES 16 A 729 VAL PRO LEU ILE GLU TYR SER PHE TYR SER ASP GLU SER SEQRES 17 A 729 LEU GLN TYR PRO LYS THR VAL ARG VAL PRO TYR PRO LYS SEQRES 18 A 729 ALA GLY ALA VAL ASN PRO THR VAL LYS PHE PHE VAL VAL SEQRES 19 A 729 ASN THR ASP SER LEU SER SER VAL THR ASN ALA THR SER SEQRES 20 A 729 ILE GLN ILE THR ALA PRO ALA SER MET LEU ILE GLY ASP SEQRES 21 A 729 HIS TYR LEU CYS ASP VAL THR TRP ALA THR GLN GLU ARG SEQRES 22 A 729 ILE SER LEU GLN TRP LEU ARG ARG ILE GLN ASN TYR SER SEQRES 23 A 729 VAL MET ASP ILE CYS ASP TYR ASP GLU SER SER GLY ARG SEQRES 24 A 729 TRP ASN CYS LEU VAL ALA ARG GLN HIS ILE GLU MET SER SEQRES 25 A 729 THR THR GLY TRP VAL GLY ARG PHE ARG PRO SER GLU PRO SEQRES 26 A 729 HIS PHE THR LEU ASP GLY ASN SER PHE TYR LYS ILE ILE SEQRES 27 A 729 SER ASN GLU GLU GLY TYR ARG HIS ILE CYS TYR PHE GLN SEQRES 28 A 729 ILE ASP LYS LYS ASP CYS THR PHE ILE THR LYS GLY THR SEQRES 29 A 729 TRP GLU VAL ILE GLY ILE GLU ALA LEU THR SER ASP TYR SEQRES 30 A 729 LEU TYR TYR ILE SER ASN GLU TYR LYS GLY MET PRO GLY SEQRES 31 A 729 GLY ARG ASN LEU TYR LYS ILE GLN LEU SER ASP TYR THR SEQRES 32 A 729 LYS VAL THR CYS LEU SER CYS GLU LEU ASN PRO GLU ARG SEQRES 33 A 729 CYS GLN TYR TYR SER VAL SER PHE SER LYS GLU ALA LYS SEQRES 34 A 729 TYR TYR GLN LEU ARG CYS SER GLY PRO GLY LEU PRO LEU SEQRES 35 A 729 TYR THR LEU HIS SER SER VAL ASN ASP LYS GLY LEU ARG SEQRES 36 A 729 VAL LEU GLU ASP ASN SER ALA LEU ASP LYS MET LEU GLN SEQRES 37 A 729 ASN VAL GLN MET PRO SER LYS LYS LEU ASP PHE ILE ILE SEQRES 38 A 729 LEU ASN GLU THR LYS PHE TRP TYR GLN MET ILE LEU PRO SEQRES 39 A 729 PRO HIS PHE ASP LYS SER LYS LYS TYR PRO LEU LEU LEU SEQRES 40 A 729 ASP VAL TYR ALA GLY PRO CYS SER GLN LYS ALA ASP THR SEQRES 41 A 729 VAL PHE ARG LEU ASN TRP ALA THR TYR LEU ALA SER THR SEQRES 42 A 729 GLU ASN ILE ILE VAL ALA SER PHE ASP GLY ARG GLY SER SEQRES 43 A 729 GLY TYR GLN GLY ASP LYS ILE MET HIS ALA ILE ASN ARG SEQRES 44 A 729 ARG LEU GLY THR PHE GLU VAL GLU ASP GLN ILE GLU ALA SEQRES 45 A 729 ALA ARG GLN PHE SER LYS MET GLY PHE VAL ASP ASN LYS SEQRES 46 A 729 ARG ILE ALA ILE TRP GLY TRP SER TYR GLY GLY TYR VAL SEQRES 47 A 729 THR SER MET VAL LEU GLY SER GLY SER GLY VAL PHE LYS SEQRES 48 A 729 CYS GLY ILE ALA VAL ALA PRO VAL SER ARG TRP GLU TYR SEQRES 49 A 729 TYR ASP SER VAL TYR THR GLU ARG TYR MET GLY LEU PRO SEQRES 50 A 729 THR PRO GLU ASP ASN LEU ASP HIS TYR ARG ASN SER THR SEQRES 51 A 729 VAL MET SER ARG ALA GLU ASN PHE LYS GLN VAL GLU TYR SEQRES 52 A 729 LEU LEU ILE HIS GLY THR ALA ASP ASP ASN VAL HIS PHE SEQRES 53 A 729 GLN GLN SER ALA GLN ILE SER LYS ALA LEU VAL ASP VAL SEQRES 54 A 729 GLY VAL ASP PHE GLN ALA MET TRP TYR THR ASP GLU ASP SEQRES 55 A 729 HIS GLY ILE ALA SER SER THR ALA HIS GLN HIS ILE TYR SEQRES 56 A 729 THR HIS MET SER HIS PHE ILE LYS GLN CYS PHE SER LEU SEQRES 57 A 729 PRO MODRES 2RIP ASN A 85 ASN GLYCOSYLATION SITE MODRES 2RIP ASN A 150 ASN GLYCOSYLATION SITE MODRES 2RIP ASN A 219 ASN GLYCOSYLATION SITE MODRES 2RIP ASN A 229 ASN GLYCOSYLATION SITE MODRES 2RIP ASN A 281 ASN GLYCOSYLATION SITE MODRES 2RIP ASN A 321 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET MAN B 3 11 HET MAN B 4 11 HET NAG C 1 14 HET NAG C 2 14 HET NAG A1219 14 HET NAG A1229 14 HET NAG A1281 14 HET NAG A1321 14 HET 34Q A 800 25 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM 34Q (3R,4R)-4-(PYRROLIDIN-1-YLCARBONYL)-1-(QUINOXALIN-2- HETNAM 2 34Q YLCARBONYL)PYRROLIDIN-3-AMINE FORMUL 2 NAG 8(C8 H15 N O6) FORMUL 2 MAN 2(C6 H12 O6) FORMUL 8 34Q C18 H21 N5 O2 FORMUL 9 HOH *27(H2 O) HELIX 1 1 THR A 44 ASN A 51 1 8 HELIX 2 2 ASP A 200 VAL A 207 1 8 HELIX 3 3 PRO A 290 ILE A 295 1 6 HELIX 4 4 VAL A 341 GLN A 344 5 4 HELIX 5 5 GLU A 421 MET A 425 5 5 HELIX 6 6 ASN A 497 ASN A 506 1 10 HELIX 7 7 ASN A 562 THR A 570 1 9 HELIX 8 8 GLY A 587 HIS A 592 1 6 HELIX 9 9 ALA A 593 ASN A 595 5 3 HELIX 10 10 THR A 600 MET A 616 1 17 HELIX 11 11 SER A 630 GLY A 641 1 12 HELIX 12 12 ARG A 658 TYR A 662 5 5 HELIX 13 13 ASP A 663 GLY A 672 1 10 HELIX 14 14 ASN A 679 SER A 686 1 8 HELIX 15 15 VAL A 688 VAL A 698 5 11 HELIX 16 16 HIS A 712 ASP A 725 1 14 HELIX 17 17 SER A 744 SER A 764 1 21 SHEET 1 A 4 LEU A 60 TRP A 62 0 SHEET 2 A 4 GLU A 67 GLN A 72 -1 O LEU A 69 N ARG A 61 SHEET 3 A 4 ASN A 75 ASN A 80 -1 O LEU A 77 N TYR A 70 SHEET 4 A 4 SER A 86 LEU A 90 -1 O LEU A 90 N ILE A 76 SHEET 1 B 4 ILE A 102 ILE A 107 0 SHEET 2 B 4 PHE A 113 LYS A 122 -1 O LEU A 115 N SER A 106 SHEET 3 B 4 TYR A 128 ASP A 136 -1 O SER A 131 N TYR A 118 SHEET 4 B 4 GLN A 141 LEU A 142 -1 O GLN A 141 N ASP A 136 SHEET 1 C 4 THR A 152 TRP A 157 0 SHEET 2 C 4 LEU A 164 TRP A 168 -1 O VAL A 167 N TRP A 154 SHEET 3 C 4 ASP A 171 LYS A 175 -1 O LYS A 175 N LEU A 164 SHEET 4 C 4 TYR A 183 ARG A 184 -1 O TYR A 183 N VAL A 174 SHEET 1 D 3 ILE A 194 ASN A 196 0 SHEET 2 D 3 PHE A 222 ASN A 229 -1 O PHE A 228 N TYR A 195 SHEET 3 D 3 LEU A 214 TRP A 216 -1 N TRP A 215 O ALA A 224 SHEET 1 E 4 ILE A 194 ASN A 196 0 SHEET 2 E 4 PHE A 222 ASN A 229 -1 O PHE A 228 N TYR A 195 SHEET 3 E 4 THR A 265 ASN A 272 -1 O PHE A 269 N TYR A 225 SHEET 4 E 4 ILE A 285 GLN A 286 -1 O ILE A 285 N VAL A 270 SHEET 1 F 2 LEU A 235 PHE A 240 0 SHEET 2 F 2 LYS A 250 PRO A 255 -1 O VAL A 252 N TYR A 238 SHEET 1 G 4 HIS A 298 THR A 307 0 SHEET 2 G 4 ARG A 310 ARG A 317 -1 O SER A 312 N THR A 304 SHEET 3 G 4 TYR A 322 ASP A 331 -1 O ASP A 326 N LEU A 313 SHEET 4 G 4 ARG A 336 CYS A 339 -1 O ASN A 338 N ASP A 329 SHEET 1 H 4 HIS A 298 THR A 307 0 SHEET 2 H 4 ARG A 310 ARG A 317 -1 O SER A 312 N THR A 304 SHEET 3 H 4 TYR A 322 ASP A 331 -1 O ASP A 326 N LEU A 313 SHEET 4 H 4 HIS A 345 MET A 348 -1 O GLU A 347 N SER A 323 SHEET 1 I 4 PRO A 362 PHE A 364 0 SHEET 2 I 4 SER A 370 SER A 376 -1 O TYR A 372 N HIS A 363 SHEET 3 I 4 ARG A 382 GLN A 388 -1 O PHE A 387 N PHE A 371 SHEET 4 I 4 THR A 395 PHE A 396 -1 O THR A 395 N TYR A 386 SHEET 1 J 4 VAL A 404 LEU A 410 0 SHEET 2 J 4 TYR A 414 SER A 419 -1 O TYR A 416 N GLU A 408 SHEET 3 J 4 ASN A 430 GLN A 435 -1 O TYR A 432 N TYR A 417 SHEET 4 J 4 ASP A 438 CYS A 444 -1 O ASP A 438 N GLN A 435 SHEET 1 K 4 TYR A 457 PHE A 461 0 SHEET 2 K 4 TYR A 467 CYS A 472 -1 O ARG A 471 N SER A 458 SHEET 3 K 4 LEU A 479 SER A 484 -1 O LEU A 479 N CYS A 472 SHEET 4 K 4 LYS A 489 GLU A 495 -1 O LEU A 494 N TYR A 480 SHEET 1 L 8 SER A 511 LEU A 519 0 SHEET 2 L 8 THR A 522 LEU A 530 -1 O THR A 522 N LEU A 519 SHEET 3 L 8 ILE A 574 PHE A 578 -1 O SER A 577 N GLN A 527 SHEET 4 L 8 TYR A 540 VAL A 546 1 N LEU A 543 O ILE A 574 SHEET 5 L 8 VAL A 619 TRP A 629 1 O ASP A 620 N TYR A 540 SHEET 6 L 8 CYS A 649 VAL A 653 1 O VAL A 653 N GLY A 628 SHEET 7 L 8 GLU A 699 GLY A 705 1 O GLU A 699 N GLY A 650 SHEET 8 L 8 GLN A 731 TYR A 735 1 O GLN A 731 N TYR A 700 SSBOND 1 CYS A 328 CYS A 339 1555 1555 2.04 SSBOND 2 CYS A 385 CYS A 394 1555 1555 2.07 SSBOND 3 CYS A 444 CYS A 447 1555 1555 2.02 LINK ND2 ASN A 85 C1 NAG B 1 1555 1555 1.43 LINK ND2 ASN A 150 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN A 219 C1 NAG A1219 1555 1555 1.45 LINK ND2 ASN A 229 C1 NAG A1229 1555 1555 1.45 LINK ND2 ASN A 281 C1 NAG A1281 1555 1555 1.45 LINK ND2 ASN A 321 C1 NAG A1321 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.45 LINK O4 NAG B 2 C1 MAN B 3 1555 1555 1.44 LINK O6 MAN B 3 C1 MAN B 4 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 CISPEP 1 GLY A 474 PRO A 475 0 -1.99 CRYST1 69.220 69.220 409.220 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014447 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014447 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002444 0.00000 MASTER 336 0 11 17 49 0 0 6 0 0 0 57 END