HEADER CYTOKINE, HORMONE/GROWTH FACTOR 25-SEP-07 2RE9 TITLE CRYSTAL STRUCTURE OF TL1A AT 2.1 A COMPND MOL_ID: 1; COMPND 2 MOLECULE: TNF SUPERFAMILY LIGAND TL1A; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: SOLUBLE PART: RESIDUES 72-251; COMPND 5 SYNONYM: TUMOR NECROSIS FACTOR (LIGAND) SUPERFAMILY, MEMBER 15; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TNFSF15; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PDEST14 KEYWDS VEGI, HOMOTRIMER, METAL BINDING, CYTOKINE, MEMBRANE, TRANSMEMBRANE, KEYWDS 2 HORMONE-GROWTH FACTOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.C.JIN,F.GUO,S.KIM,A.J.HOWARD,Y.Z.ZHANG REVDAT 5 25-OCT-17 2RE9 1 REMARK REVDAT 4 13-JUL-11 2RE9 1 VERSN REVDAT 3 24-FEB-09 2RE9 1 VERSN REVDAT 2 30-OCT-07 2RE9 1 JRNL REVDAT 1 09-OCT-07 2RE9 0 JRNL AUTH T.JIN,F.GUO,S.KIM,A.HOWARD,Y.Z.ZHANG JRNL TITL X-RAY CRYSTAL STRUCTURE OF TNF LIGAND FAMILY MEMBER TL1A AT JRNL TITL 2 2.1 A. JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 364 1 2007 JRNL REFN ISSN 0006-291X JRNL PMID 17935696 JRNL DOI 10.1016/J.BBRC.2007.09.097 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.C.JIN,F.GUO,S.KIM,A.J.HOWARD,Y.Z.ZHANG REMARK 1 TITL PURIFICATION AND CRYSTALLIZATION OF RECOMBINANT HUMAN REMARK 1 TITL 2 TNF-LIKE LIGAND TL1A REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 43958 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : THIN SHELLS REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 2194 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3945 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.349 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 78.26 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR:PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR:WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : CNS_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 4 : CNS_TOPPAR:GLYCEROL.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RE9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-SEP-07. REMARK 100 THE DEPOSITION ID IS D_1000044755. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.86 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : ID REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46993 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : 0.13100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.96000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1A8M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM FORMATE, PH 6.86, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.67300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 57.45550 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 57.45550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.83650 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 57.45550 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 57.45550 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 89.50950 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 57.45550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.45550 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 29.83650 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 57.45550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.45550 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 89.50950 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 59.67300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT BIOLOGICAL UNIT IS THE SAME AS REMARK 300 ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7660 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 LEU A 1 REMARK 465 LYS A 2 REMARK 465 GLY A 3 REMARK 465 GLN A 4 REMARK 465 GLU A 5 REMARK 465 PHE A 6 REMARK 465 ALA A 7 REMARK 465 PRO A 8 REMARK 465 SER A 9 REMARK 465 HIS A 10 REMARK 465 GLN A 11 REMARK 465 GLN A 12 REMARK 465 VAL A 13 REMARK 465 TYR A 14 REMARK 465 ALA A 15 REMARK 465 PRO A 16 REMARK 465 GLY B 0 REMARK 465 LEU B 1 REMARK 465 LYS B 2 REMARK 465 GLY B 3 REMARK 465 GLN B 4 REMARK 465 GLU B 5 REMARK 465 PHE B 6 REMARK 465 ALA B 7 REMARK 465 PRO B 8 REMARK 465 SER B 9 REMARK 465 HIS B 10 REMARK 465 GLN B 11 REMARK 465 GLN B 12 REMARK 465 VAL B 13 REMARK 465 TYR B 14 REMARK 465 ALA B 15 REMARK 465 PRO B 16 REMARK 465 GLY C 0 REMARK 465 LEU C 1 REMARK 465 LYS C 2 REMARK 465 GLY C 3 REMARK 465 GLN C 4 REMARK 465 GLU C 5 REMARK 465 PHE C 6 REMARK 465 ALA C 7 REMARK 465 PRO C 8 REMARK 465 SER C 9 REMARK 465 HIS C 10 REMARK 465 GLN C 11 REMARK 465 GLN C 12 REMARK 465 VAL C 13 REMARK 465 TYR C 14 REMARK 465 ALA C 15 REMARK 465 PRO C 16 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE B 39 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 309 O HOH A 309 7555 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 20 59.96 -91.46 REMARK 500 ASP A 22 29.18 -79.34 REMARK 500 GLU A 51 -4.22 -141.80 REMARK 500 ARG A 60 -10.58 84.11 REMARK 500 SER A 89 -155.72 -74.43 REMARK 500 GLN A 96 94.54 -49.01 REMARK 500 ALA A 97 18.17 -170.70 REMARK 500 PRO A 118 30.25 -99.67 REMARK 500 ARG B 18 -158.18 -103.85 REMARK 500 ALA B 19 -12.77 -145.78 REMARK 500 ASN B 41 49.90 -92.22 REMARK 500 GLN B 42 151.84 175.74 REMARK 500 GLU B 51 -13.67 -144.29 REMARK 500 ARG B 60 -5.66 78.84 REMARK 500 LYS B 66 -0.84 72.25 REMARK 500 GLN B 96 3.99 -68.74 REMARK 500 SER B 116 -84.81 -71.92 REMARK 500 CYS B 131 64.79 -156.66 REMARK 500 GLU C 51 -25.39 -141.63 REMARK 500 ARG C 60 -6.98 81.83 REMARK 500 LYS C 66 -16.45 76.18 REMARK 500 SER C 80 147.72 -170.78 REMARK 500 SER C 89 -168.04 -69.94 REMARK 500 GLU C 93 -141.82 -146.24 REMARK 500 ARG C 95 -153.04 -86.15 REMARK 500 GLN C 96 -157.97 -92.71 REMARK 500 ALA C 97 47.27 -80.22 REMARK 500 CYS C 131 60.02 -163.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 181 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 187 O REMARK 620 2 HOH A 186 O 86.3 REMARK 620 3 HOH A 188 O 90.4 95.7 REMARK 620 4 HOH A 183 O 85.8 88.2 174.4 REMARK 620 5 HOH A 184 O 172.8 95.3 96.4 87.3 REMARK 620 6 HOH A 185 O 91.4 177.3 83.0 93.0 87.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 181 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 182 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 181 DBREF 2RE9 A 1 180 UNP Q8NFE9 Q8NFE9_HUMAN 72 251 DBREF 2RE9 B 1 180 UNP Q8NFE9 Q8NFE9_HUMAN 72 251 DBREF 2RE9 C 1 180 UNP Q8NFE9 Q8NFE9_HUMAN 72 251 SEQADV 2RE9 GLY A 0 UNP Q8NFE9 EXPRESSION TAG SEQADV 2RE9 GLY B 0 UNP Q8NFE9 EXPRESSION TAG SEQADV 2RE9 GLY C 0 UNP Q8NFE9 EXPRESSION TAG SEQRES 1 A 181 GLY LEU LYS GLY GLN GLU PHE ALA PRO SER HIS GLN GLN SEQRES 2 A 181 VAL TYR ALA PRO LEU ARG ALA ASP GLY ASP LYS PRO ARG SEQRES 3 A 181 ALA HIS LEU THR VAL VAL ARG GLN THR PRO THR GLN HIS SEQRES 4 A 181 PHE LYS ASN GLN PHE PRO ALA LEU HIS TRP GLU HIS GLU SEQRES 5 A 181 LEU GLY LEU ALA PHE THR LYS ASN ARG MET ASN TYR THR SEQRES 6 A 181 ASN LYS PHE LEU LEU ILE PRO GLU SER GLY ASP TYR PHE SEQRES 7 A 181 ILE TYR SER GLN VAL THR PHE ARG GLY MET THR SER GLU SEQRES 8 A 181 CYS SER GLU ILE ARG GLN ALA GLY ARG PRO ASN LYS PRO SEQRES 9 A 181 ASP SER ILE THR VAL VAL ILE THR LYS VAL THR ASP SER SEQRES 10 A 181 TYR PRO GLU PRO THR GLN LEU LEU MET GLY THR LYS SER SEQRES 11 A 181 VAL CYS GLU VAL GLY SER ASN TRP PHE GLN PRO ILE TYR SEQRES 12 A 181 LEU GLY ALA MET PHE SER LEU GLN GLU GLY ASP LYS LEU SEQRES 13 A 181 MET VAL ASN VAL SER ASP ILE SER LEU VAL ASP TYR THR SEQRES 14 A 181 LYS GLU ASP LYS THR PHE PHE GLY ALA PHE LEU LEU SEQRES 1 B 181 GLY LEU LYS GLY GLN GLU PHE ALA PRO SER HIS GLN GLN SEQRES 2 B 181 VAL TYR ALA PRO LEU ARG ALA ASP GLY ASP LYS PRO ARG SEQRES 3 B 181 ALA HIS LEU THR VAL VAL ARG GLN THR PRO THR GLN HIS SEQRES 4 B 181 PHE LYS ASN GLN PHE PRO ALA LEU HIS TRP GLU HIS GLU SEQRES 5 B 181 LEU GLY LEU ALA PHE THR LYS ASN ARG MET ASN TYR THR SEQRES 6 B 181 ASN LYS PHE LEU LEU ILE PRO GLU SER GLY ASP TYR PHE SEQRES 7 B 181 ILE TYR SER GLN VAL THR PHE ARG GLY MET THR SER GLU SEQRES 8 B 181 CYS SER GLU ILE ARG GLN ALA GLY ARG PRO ASN LYS PRO SEQRES 9 B 181 ASP SER ILE THR VAL VAL ILE THR LYS VAL THR ASP SER SEQRES 10 B 181 TYR PRO GLU PRO THR GLN LEU LEU MET GLY THR LYS SER SEQRES 11 B 181 VAL CYS GLU VAL GLY SER ASN TRP PHE GLN PRO ILE TYR SEQRES 12 B 181 LEU GLY ALA MET PHE SER LEU GLN GLU GLY ASP LYS LEU SEQRES 13 B 181 MET VAL ASN VAL SER ASP ILE SER LEU VAL ASP TYR THR SEQRES 14 B 181 LYS GLU ASP LYS THR PHE PHE GLY ALA PHE LEU LEU SEQRES 1 C 181 GLY LEU LYS GLY GLN GLU PHE ALA PRO SER HIS GLN GLN SEQRES 2 C 181 VAL TYR ALA PRO LEU ARG ALA ASP GLY ASP LYS PRO ARG SEQRES 3 C 181 ALA HIS LEU THR VAL VAL ARG GLN THR PRO THR GLN HIS SEQRES 4 C 181 PHE LYS ASN GLN PHE PRO ALA LEU HIS TRP GLU HIS GLU SEQRES 5 C 181 LEU GLY LEU ALA PHE THR LYS ASN ARG MET ASN TYR THR SEQRES 6 C 181 ASN LYS PHE LEU LEU ILE PRO GLU SER GLY ASP TYR PHE SEQRES 7 C 181 ILE TYR SER GLN VAL THR PHE ARG GLY MET THR SER GLU SEQRES 8 C 181 CYS SER GLU ILE ARG GLN ALA GLY ARG PRO ASN LYS PRO SEQRES 9 C 181 ASP SER ILE THR VAL VAL ILE THR LYS VAL THR ASP SER SEQRES 10 C 181 TYR PRO GLU PRO THR GLN LEU LEU MET GLY THR LYS SER SEQRES 11 C 181 VAL CYS GLU VAL GLY SER ASN TRP PHE GLN PRO ILE TYR SEQRES 12 C 181 LEU GLY ALA MET PHE SER LEU GLN GLU GLY ASP LYS LEU SEQRES 13 C 181 MET VAL ASN VAL SER ASP ILE SER LEU VAL ASP TYR THR SEQRES 14 C 181 LYS GLU ASP LYS THR PHE PHE GLY ALA PHE LEU LEU HET MG A 181 1 HET GOL A 182 6 HET GOL B 181 6 HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 MG MG 2+ FORMUL 5 GOL 2(C3 H8 O3) FORMUL 7 HOH *500(H2 O) HELIX 1 1 ASP A 161 VAL A 165 5 5 HELIX 2 2 ASP B 161 VAL B 165 5 5 HELIX 3 3 ALA C 19 LYS C 23 5 5 HELIX 4 4 ASP C 161 VAL C 165 5 5 SHEET 1 A 3 TRP A 48 GLU A 49 0 SHEET 2 A 3 ARG A 25 VAL A 30 -1 N THR A 29 O GLU A 49 SHEET 3 A 3 PHE A 56 LYS A 58 -1 O PHE A 56 N HIS A 27 SHEET 1 B 5 TRP A 48 GLU A 49 0 SHEET 2 B 5 ARG A 25 VAL A 30 -1 N THR A 29 O GLU A 49 SHEET 3 B 5 PHE A 174 LEU A 179 -1 O PHE A 175 N LEU A 28 SHEET 4 B 5 GLY A 74 MET A 87 -1 N TYR A 79 O GLY A 176 SHEET 5 B 5 ASN A 136 LEU A 149 -1 O LEU A 149 N GLY A 74 SHEET 1 C 5 ASN A 62 THR A 64 0 SHEET 2 C 5 PHE A 67 LEU A 69 -1 O LEU A 69 N ASN A 62 SHEET 3 C 5 LYS A 154 VAL A 159 -1 O LEU A 155 N LEU A 68 SHEET 4 C 5 ASP A 104 VAL A 113 -1 N VAL A 109 O ASN A 158 SHEET 5 C 5 THR A 121 VAL A 130 -1 O VAL A 130 N ASP A 104 SHEET 1 D 3 TRP B 48 GLU B 49 0 SHEET 2 D 3 ARG B 25 VAL B 30 -1 N THR B 29 O GLU B 49 SHEET 3 D 3 PHE B 56 LYS B 58 -1 O LYS B 58 N ARG B 25 SHEET 1 E 5 TRP B 48 GLU B 49 0 SHEET 2 E 5 ARG B 25 VAL B 30 -1 N THR B 29 O GLU B 49 SHEET 3 E 5 PHE B 174 LEU B 179 -1 O PHE B 175 N LEU B 28 SHEET 4 E 5 GLY B 74 MET B 87 -1 N TYR B 79 O GLY B 176 SHEET 5 E 5 ASN B 136 LEU B 149 -1 O LEU B 149 N GLY B 74 SHEET 1 F 5 ASN B 62 THR B 64 0 SHEET 2 F 5 PHE B 67 LEU B 69 -1 O LEU B 69 N ASN B 62 SHEET 3 F 5 LYS B 154 VAL B 159 -1 O LEU B 155 N LEU B 68 SHEET 4 F 5 ASP B 104 VAL B 113 -1 N VAL B 109 O ASN B 158 SHEET 5 F 5 THR B 121 VAL B 130 -1 O VAL B 130 N ASP B 104 SHEET 1 G 3 TRP C 48 GLU C 49 0 SHEET 2 G 3 ARG C 25 VAL C 30 -1 N THR C 29 O GLU C 49 SHEET 3 G 3 PHE C 56 LYS C 58 -1 O LYS C 58 N ARG C 25 SHEET 1 H 5 TRP C 48 GLU C 49 0 SHEET 2 H 5 ARG C 25 VAL C 30 -1 N THR C 29 O GLU C 49 SHEET 3 H 5 PHE C 174 LEU C 179 -1 O PHE C 175 N LEU C 28 SHEET 4 H 5 GLY C 74 MET C 87 -1 N TYR C 79 O GLY C 176 SHEET 5 H 5 ASN C 136 LEU C 149 -1 O GLN C 139 N PHE C 84 SHEET 1 I 5 ASN C 62 THR C 64 0 SHEET 2 I 5 PHE C 67 LEU C 69 -1 O LEU C 69 N ASN C 62 SHEET 3 I 5 LYS C 154 VAL C 159 -1 O LEU C 155 N LEU C 68 SHEET 4 I 5 ASP C 104 THR C 114 -1 N VAL C 109 O ASN C 158 SHEET 5 I 5 TYR C 117 VAL C 130 -1 O GLY C 126 N VAL C 108 SSBOND 1 CYS A 91 CYS A 131 1555 1555 2.04 SSBOND 2 CYS B 91 CYS B 131 1555 1555 2.03 SSBOND 3 CYS C 91 CYS C 131 1555 1555 2.03 LINK MG MG A 181 O HOH A 187 1555 1555 2.44 LINK MG MG A 181 O HOH A 186 1555 1555 2.32 LINK MG MG A 181 O HOH A 188 1555 1555 2.38 LINK MG MG A 181 O HOH A 183 1555 1555 2.32 LINK MG MG A 181 O HOH A 184 1555 1555 2.28 LINK MG MG A 181 O HOH A 185 1555 1555 2.34 CISPEP 1 TYR A 117 PRO A 118 0 -0.22 SITE 1 AC1 6 HOH A 183 HOH A 184 HOH A 185 HOH A 186 SITE 2 AC1 6 HOH A 187 HOH A 188 SITE 1 AC2 8 LYS A 128 TYR A 142 HOH A 197 HOH A 201 SITE 2 AC2 8 LYS B 128 ILE B 141 TYR B 142 LYS C 128 SITE 1 AC3 5 THR A 64 ASN A 65 THR B 57 LYS B 58 SITE 2 AC3 5 HOH B 189 CRYST1 114.911 114.911 119.346 90.00 90.00 90.00 P 41 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008702 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008702 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008379 0.00000 MASTER 401 0 3 4 39 0 6 6 0 0 0 42 END