HEADER HYDROLASE/HYDROLASE ACTIVATOR 30-AUG-07 2R3Y TITLE CRYSTAL STRUCTURE OF THE DEGS PROTEASE IN COMPLEX WITH THE TITLE 2 YWF ACTIVATING PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEASE DEGS; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 3.4.21.-; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: SYNTHETIC PEPTIDE YWF; COMPND 8 CHAIN: D, E, F; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: DEGS, HHOB, HTRH; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15-B; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 OTHER_DETAILS: THE YWF PEPTIDE MIMICS THE C-TERMINUS OF SOURCE 13 OUTER MEMBRANE PROTEINS. KEYWDS REVERSIBLE ACTIVATION OF A PROTEASE, CATALYTIC TRIAD, KEYWDS 2 HYDROLASE, PERIPLASM, SERINE PROTEASE, HYDROLASE/HYDROLASE KEYWDS 3 ACTIVATOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.CLAUSEN,H.HASSELBLATT REVDAT 2 24-FEB-09 2R3Y 1 VERSN REVDAT 1 27-NOV-07 2R3Y 0 JRNL AUTH H.HASSELBLATT,R.KURZBAUER,C.WILKEN,T.KROJER,J.SAWA, JRNL AUTH 2 J.KURT,R.KIRK,S.HASENBEIN,M.EHRMANN,T.CLAUSEN JRNL TITL REGULATION OF THE SIGMAE STRESS RESPONSE BY DEGS: JRNL TITL 2 HOW THE PDZ DOMAIN KEEPS THE PROTEASE INACTIVE IN JRNL TITL 3 THE RESTING STATE AND ALLOWS INTEGRATION OF JRNL TITL 4 DIFFERENT OMP-DERIVED STRESS SIGNALS UPON FOLDING JRNL TITL 5 STRESS. JRNL REF GENES DEV. V. 21 2659 2007 JRNL REFN ISSN 0890-9369 JRNL PMID 17938245 JRNL DOI 10.1101/GAD.445307 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.0 REMARK 3 NUMBER OF REFLECTIONS : 38774 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1923 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6292 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 157 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 60.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.45 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2R3Y COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-OCT-07. REMARK 100 THE RCSB ID CODE IS RCSB044394. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-OCT-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39228 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : 0.04700 REMARK 200 FOR THE DATA SET : 13.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.32000 REMARK 200 R SYM FOR SHELL (I) : 0.33000 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1SOZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: THE YWF (100 MICROM) WAS ADDED TO REMARK 280 DEGS AND INCUBATED 30 MINUTES BEFORE SETTING UP THE CO- REMARK 280 CRYSTALLIZATION TRIALS. CRYSTALS OF THE COMPLEX WERE GROWN IN REMARK 280 SITTING DROPS AT 19 C BY MIXING 4 MICROL OF DEGS/YWF WITH 2 REMARK 280 MICROL OF A CRYSTALLIZATION SOLUTION CONTAINING 0.1 M HEPES REMARK 280 (PH 7.5), 6% PEG 6000, 9% MPD AND 10 MM MGCL2. CRYSTAL TRIALS REMARK 280 WERE SET UP IN CRYSCHEM PLATES WITH A RESERVOIR VOLUME OF 400 REMARK 280 MICROL. , VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 102.90000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 71.35000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 102.90000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 71.35000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ONE HOMOTRIMER OF DEGS WAS OBSERVED IN THE ASYMMETRIC REMARK 300 UNIT AND SHOULD REPRESENT ITS PHYSIOLOGICAL STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9210 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 264 REMARK 465 GLU A 265 REMARK 465 ILE A 266 REMARK 465 ALA A 267 REMARK 465 PRO A 268 REMARK 465 LEU A 269 REMARK 465 HIS A 270 REMARK 465 ALA A 271 REMARK 465 GLN A 272 REMARK 465 GLY A 273 REMARK 465 GLY A 274 REMARK 465 GLY A 275 REMARK 465 ILE A 276 REMARK 465 ASP A 277 REMARK 465 GLN A 278 REMARK 465 LEU A 279 REMARK 465 GLN A 280 REMARK 465 GLY A 281 REMARK 465 ILE A 313 REMARK 465 SER A 314 REMARK 465 ALA A 315 REMARK 465 LEU A 316 REMARK 465 GLU A 317 REMARK 465 MET A 336 REMARK 465 ARG A 337 REMARK 465 ASP A 338 REMARK 465 ASP A 339 REMARK 465 LYS A 340 REMARK 465 GLN A 341 REMARK 465 LEU A 342 REMARK 465 THR A 343 REMARK 465 ALA A 353 REMARK 465 THR A 354 REMARK 465 ASN A 355 REMARK 465 ASN B 67 REMARK 465 THR B 68 REMARK 465 ASN B 69 REMARK 465 SER B 70 REMARK 465 HIS B 71 REMARK 465 ASN B 72 REMARK 465 ARG B 264 REMARK 465 GLU B 265 REMARK 465 ILE B 266 REMARK 465 ALA B 267 REMARK 465 PRO B 268 REMARK 465 LEU B 269 REMARK 465 HIS B 270 REMARK 465 ALA B 271 REMARK 465 GLN B 272 REMARK 465 GLY B 273 REMARK 465 GLY B 274 REMARK 465 GLY B 275 REMARK 465 ILE B 276 REMARK 465 ASP B 277 REMARK 465 GLN B 278 REMARK 465 LEU B 279 REMARK 465 GLN B 280 REMARK 465 GLY B 281 REMARK 465 ILE B 313 REMARK 465 SER B 314 REMARK 465 ALA B 315 REMARK 465 LEU B 316 REMARK 465 GLU B 317 REMARK 465 MET B 336 REMARK 465 ARG B 337 REMARK 465 ASP B 338 REMARK 465 ASP B 339 REMARK 465 LYS B 340 REMARK 465 GLN B 341 REMARK 465 LEU B 342 REMARK 465 THR B 343 REMARK 465 ALA B 353 REMARK 465 THR B 354 REMARK 465 ASN B 355 REMARK 465 THR C 68 REMARK 465 ASN C 69 REMARK 465 SER C 70 REMARK 465 HIS C 71 REMARK 465 ASN C 72 REMARK 465 ARG C 264 REMARK 465 GLU C 265 REMARK 465 ILE C 266 REMARK 465 ALA C 267 REMARK 465 PRO C 268 REMARK 465 LEU C 269 REMARK 465 HIS C 270 REMARK 465 ALA C 271 REMARK 465 GLN C 272 REMARK 465 GLY C 273 REMARK 465 GLY C 274 REMARK 465 GLY C 275 REMARK 465 ILE C 276 REMARK 465 ASP C 277 REMARK 465 GLN C 278 REMARK 465 LEU C 279 REMARK 465 GLN C 280 REMARK 465 GLY C 281 REMARK 465 ILE C 313 REMARK 465 SER C 314 REMARK 465 ALA C 315 REMARK 465 LEU C 316 REMARK 465 GLU C 317 REMARK 465 MET C 336 REMARK 465 ARG C 337 REMARK 465 ASP C 338 REMARK 465 ASP C 339 REMARK 465 LYS C 340 REMARK 465 GLN C 341 REMARK 465 LEU C 342 REMARK 465 THR C 343 REMARK 465 ALA C 353 REMARK 465 THR C 354 REMARK 465 ASN C 355 REMARK 465 ASP D 401 REMARK 465 ASN D 402 REMARK 465 ARG D 403 REMARK 465 LEU D 404 REMARK 465 GLY D 405 REMARK 465 LEU D 406 REMARK 465 ASP E 401 REMARK 465 ASN E 402 REMARK 465 ARG E 403 REMARK 465 LEU E 404 REMARK 465 GLY E 405 REMARK 465 LEU E 406 REMARK 465 ASP F 401 REMARK 465 ASN F 402 REMARK 465 ARG F 403 REMARK 465 LEU F 404 REMARK 465 GLY F 405 REMARK 465 LEU F 406 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 162 25.65 40.51 REMARK 500 LEU A 181 -146.54 -56.91 REMARK 500 PRO A 183 -120.83 -67.93 REMARK 500 THR A 184 -68.40 -103.30 REMARK 500 ARG A 186 60.89 -55.24 REMARK 500 ASN A 188 129.54 -33.79 REMARK 500 PHE A 220 36.36 -69.75 REMARK 500 ASN A 224 -15.25 -33.24 REMARK 500 ASP A 225 101.15 -168.14 REMARK 500 ASN A 285 126.71 172.80 REMARK 500 PRO A 289 141.02 -17.63 REMARK 500 ALA A 293 5.34 -50.37 REMARK 500 ALA A 296 -74.50 -93.67 REMARK 500 GLN A 299 -132.77 -70.45 REMARK 500 VAL A 300 -77.27 -122.94 REMARK 500 LEU A 303 -143.84 -79.89 REMARK 500 ILE A 304 152.76 162.33 REMARK 500 ILE A 305 -81.35 -119.43 REMARK 500 ASP A 308 45.58 86.39 REMARK 500 ASN A 309 73.70 53.93 REMARK 500 LYS A 310 146.20 -178.79 REMARK 500 ASN B 133 74.66 -108.22 REMARK 500 TYR B 162 25.43 49.15 REMARK 500 PRO B 183 -166.89 -66.15 REMARK 500 THR B 217 -131.56 -107.51 REMARK 500 ASN B 224 -153.10 54.39 REMARK 500 ASP B 225 73.81 -103.62 REMARK 500 ILE B 259 -95.41 -123.90 REMARK 500 ASN B 285 133.98 -177.32 REMARK 500 PRO B 289 -176.95 -20.87 REMARK 500 PRO B 292 -71.65 -63.67 REMARK 500 ALA B 293 -14.08 -36.29 REMARK 500 GLN B 299 -161.81 -66.38 REMARK 500 VAL B 300 -84.48 -90.59 REMARK 500 ILE B 305 -78.60 -130.04 REMARK 500 ASP B 308 56.65 71.58 REMARK 500 THR C 184 105.98 -166.00 REMARK 500 THR C 217 -88.47 -118.31 REMARK 500 ASP C 221 -92.67 -64.01 REMARK 500 ASP C 225 57.60 -167.51 REMARK 500 ARG C 253 -176.17 -177.47 REMARK 500 ILE C 259 -106.05 -73.00 REMARK 500 ASN C 285 149.95 166.85 REMARK 500 PRO C 289 153.50 -39.49 REMARK 500 ASN C 295 40.18 -98.08 REMARK 500 VAL C 300 -89.65 -58.75 REMARK 500 ASP C 302 -174.27 -176.54 REMARK 500 ILE C 305 -96.00 -133.23 REMARK 500 MET C 319 -70.65 -66.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 391 DISTANCE = 5.38 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1SOT RELATED DB: PDB REMARK 900 DEGS REMARK 900 RELATED ID: 1SOZ RELATED DB: PDB REMARK 900 DEGS/YQF REMARK 900 RELATED ID: 1VCW RELATED DB: PDB REMARK 900 DEGS BACKSOAK REMARK 900 RELATED ID: 2R3U RELATED DB: PDB REMARK 900 DEGS DELTA PDZ DBREF 2R3Y A 43 355 UNP P0AEE3 DEGS_ECOLI 43 355 DBREF 2R3Y B 43 355 UNP P0AEE3 DEGS_ECOLI 43 355 DBREF 2R3Y C 43 355 UNP P0AEE3 DEGS_ECOLI 43 355 DBREF 2R3Y D 401 410 PDB 2R3Y 2R3Y 1 10 DBREF 2R3Y E 401 410 PDB 2R3Y 2R3Y 1 10 DBREF 2R3Y F 401 410 PDB 2R3Y 2R3Y 1 10 SEQADV 2R3Y MET A 42 UNP P0AEE3 INITIATING METHIONINE SEQADV 2R3Y MET B 42 UNP P0AEE3 INITIATING METHIONINE SEQADV 2R3Y MET C 42 UNP P0AEE3 INITIATING METHIONINE SEQRES 1 A 314 MET THR PRO ALA SER TYR ASN LEU ALA VAL ARG ARG ALA SEQRES 2 A 314 ALA PRO ALA VAL VAL ASN VAL TYR ASN ARG GLY LEU ASN SEQRES 3 A 314 THR ASN SER HIS ASN GLN LEU GLU ILE ARG THR LEU GLY SEQRES 4 A 314 SER GLY VAL ILE MET ASP GLN ARG GLY TYR ILE ILE THR SEQRES 5 A 314 ASN LYS HIS VAL ILE ASN ASP ALA ASP GLN ILE ILE VAL SEQRES 6 A 314 ALA LEU GLN ASP GLY ARG VAL PHE GLU ALA LEU LEU VAL SEQRES 7 A 314 GLY SER ASP SER LEU THR ASP LEU ALA VAL LEU LYS ILE SEQRES 8 A 314 ASN ALA THR GLY GLY LEU PRO THR ILE PRO ILE ASN ALA SEQRES 9 A 314 ARG ARG VAL PRO HIS ILE GLY ASP VAL VAL LEU ALA ILE SEQRES 10 A 314 GLY ASN PRO TYR ASN LEU GLY GLN THR ILE THR GLN GLY SEQRES 11 A 314 ILE ILE SER ALA THR GLY ARG ILE GLY LEU ASN PRO THR SEQRES 12 A 314 GLY ARG GLN ASN PHE LEU GLN THR ASP ALA SER ILE ASN SEQRES 13 A 314 HIS GLY ASN SER GLY GLY ALA LEU VAL ASN SER LEU GLY SEQRES 14 A 314 GLU LEU MET GLY ILE ASN THR LEU SER PHE ASP LYS SER SEQRES 15 A 314 ASN ASP GLY GLU THR PRO GLU GLY ILE GLY PHE ALA ILE SEQRES 16 A 314 PRO PHE GLN LEU ALA THR LYS ILE MET ASP LYS LEU ILE SEQRES 17 A 314 ARG ASP GLY ARG VAL ILE ARG GLY TYR ILE GLY ILE GLY SEQRES 18 A 314 GLY ARG GLU ILE ALA PRO LEU HIS ALA GLN GLY GLY GLY SEQRES 19 A 314 ILE ASP GLN LEU GLN GLY ILE VAL VAL ASN GLU VAL SER SEQRES 20 A 314 PRO ASP GLY PRO ALA ALA ASN ALA GLY ILE GLN VAL ASN SEQRES 21 A 314 ASP LEU ILE ILE SER VAL ASP ASN LYS PRO ALA ILE SER SEQRES 22 A 314 ALA LEU GLU THR MET ASP GLN VAL ALA GLU ILE ARG PRO SEQRES 23 A 314 GLY SER VAL ILE PRO VAL VAL VAL MET ARG ASP ASP LYS SEQRES 24 A 314 GLN LEU THR LEU GLN VAL THR ILE GLN GLU TYR PRO ALA SEQRES 25 A 314 THR ASN SEQRES 1 B 314 MET THR PRO ALA SER TYR ASN LEU ALA VAL ARG ARG ALA SEQRES 2 B 314 ALA PRO ALA VAL VAL ASN VAL TYR ASN ARG GLY LEU ASN SEQRES 3 B 314 THR ASN SER HIS ASN GLN LEU GLU ILE ARG THR LEU GLY SEQRES 4 B 314 SER GLY VAL ILE MET ASP GLN ARG GLY TYR ILE ILE THR SEQRES 5 B 314 ASN LYS HIS VAL ILE ASN ASP ALA ASP GLN ILE ILE VAL SEQRES 6 B 314 ALA LEU GLN ASP GLY ARG VAL PHE GLU ALA LEU LEU VAL SEQRES 7 B 314 GLY SER ASP SER LEU THR ASP LEU ALA VAL LEU LYS ILE SEQRES 8 B 314 ASN ALA THR GLY GLY LEU PRO THR ILE PRO ILE ASN ALA SEQRES 9 B 314 ARG ARG VAL PRO HIS ILE GLY ASP VAL VAL LEU ALA ILE SEQRES 10 B 314 GLY ASN PRO TYR ASN LEU GLY GLN THR ILE THR GLN GLY SEQRES 11 B 314 ILE ILE SER ALA THR GLY ARG ILE GLY LEU ASN PRO THR SEQRES 12 B 314 GLY ARG GLN ASN PHE LEU GLN THR ASP ALA SER ILE ASN SEQRES 13 B 314 HIS GLY ASN SER GLY GLY ALA LEU VAL ASN SER LEU GLY SEQRES 14 B 314 GLU LEU MET GLY ILE ASN THR LEU SER PHE ASP LYS SER SEQRES 15 B 314 ASN ASP GLY GLU THR PRO GLU GLY ILE GLY PHE ALA ILE SEQRES 16 B 314 PRO PHE GLN LEU ALA THR LYS ILE MET ASP LYS LEU ILE SEQRES 17 B 314 ARG ASP GLY ARG VAL ILE ARG GLY TYR ILE GLY ILE GLY SEQRES 18 B 314 GLY ARG GLU ILE ALA PRO LEU HIS ALA GLN GLY GLY GLY SEQRES 19 B 314 ILE ASP GLN LEU GLN GLY ILE VAL VAL ASN GLU VAL SER SEQRES 20 B 314 PRO ASP GLY PRO ALA ALA ASN ALA GLY ILE GLN VAL ASN SEQRES 21 B 314 ASP LEU ILE ILE SER VAL ASP ASN LYS PRO ALA ILE SER SEQRES 22 B 314 ALA LEU GLU THR MET ASP GLN VAL ALA GLU ILE ARG PRO SEQRES 23 B 314 GLY SER VAL ILE PRO VAL VAL VAL MET ARG ASP ASP LYS SEQRES 24 B 314 GLN LEU THR LEU GLN VAL THR ILE GLN GLU TYR PRO ALA SEQRES 25 B 314 THR ASN SEQRES 1 C 314 MET THR PRO ALA SER TYR ASN LEU ALA VAL ARG ARG ALA SEQRES 2 C 314 ALA PRO ALA VAL VAL ASN VAL TYR ASN ARG GLY LEU ASN SEQRES 3 C 314 THR ASN SER HIS ASN GLN LEU GLU ILE ARG THR LEU GLY SEQRES 4 C 314 SER GLY VAL ILE MET ASP GLN ARG GLY TYR ILE ILE THR SEQRES 5 C 314 ASN LYS HIS VAL ILE ASN ASP ALA ASP GLN ILE ILE VAL SEQRES 6 C 314 ALA LEU GLN ASP GLY ARG VAL PHE GLU ALA LEU LEU VAL SEQRES 7 C 314 GLY SER ASP SER LEU THR ASP LEU ALA VAL LEU LYS ILE SEQRES 8 C 314 ASN ALA THR GLY GLY LEU PRO THR ILE PRO ILE ASN ALA SEQRES 9 C 314 ARG ARG VAL PRO HIS ILE GLY ASP VAL VAL LEU ALA ILE SEQRES 10 C 314 GLY ASN PRO TYR ASN LEU GLY GLN THR ILE THR GLN GLY SEQRES 11 C 314 ILE ILE SER ALA THR GLY ARG ILE GLY LEU ASN PRO THR SEQRES 12 C 314 GLY ARG GLN ASN PHE LEU GLN THR ASP ALA SER ILE ASN SEQRES 13 C 314 HIS GLY ASN SER GLY GLY ALA LEU VAL ASN SER LEU GLY SEQRES 14 C 314 GLU LEU MET GLY ILE ASN THR LEU SER PHE ASP LYS SER SEQRES 15 C 314 ASN ASP GLY GLU THR PRO GLU GLY ILE GLY PHE ALA ILE SEQRES 16 C 314 PRO PHE GLN LEU ALA THR LYS ILE MET ASP LYS LEU ILE SEQRES 17 C 314 ARG ASP GLY ARG VAL ILE ARG GLY TYR ILE GLY ILE GLY SEQRES 18 C 314 GLY ARG GLU ILE ALA PRO LEU HIS ALA GLN GLY GLY GLY SEQRES 19 C 314 ILE ASP GLN LEU GLN GLY ILE VAL VAL ASN GLU VAL SER SEQRES 20 C 314 PRO ASP GLY PRO ALA ALA ASN ALA GLY ILE GLN VAL ASN SEQRES 21 C 314 ASP LEU ILE ILE SER VAL ASP ASN LYS PRO ALA ILE SER SEQRES 22 C 314 ALA LEU GLU THR MET ASP GLN VAL ALA GLU ILE ARG PRO SEQRES 23 C 314 GLY SER VAL ILE PRO VAL VAL VAL MET ARG ASP ASP LYS SEQRES 24 C 314 GLN LEU THR LEU GLN VAL THR ILE GLN GLU TYR PRO ALA SEQRES 25 C 314 THR ASN SEQRES 1 D 10 ASP ASN ARG LEU GLY LEU VAL TYR TRP PHE SEQRES 1 E 10 ASP ASN ARG LEU GLY LEU VAL TYR TRP PHE SEQRES 1 F 10 ASP ASN ARG LEU GLY LEU VAL TYR TRP PHE FORMUL 7 HOH *157(H2 O) HELIX 1 1 TYR A 47 ALA A 55 1 9 HELIX 2 2 LYS A 95 ASN A 99 1 5 HELIX 3 3 ASN A 160 LEU A 164 5 5 HELIX 4 4 PHE A 238 GLY A 252 1 15 HELIX 5 5 GLY A 291 ASN A 295 5 5 HELIX 6 6 THR A 318 ALA A 323 1 6 HELIX 7 7 TYR B 47 ALA B 55 1 9 HELIX 8 8 LYS B 95 ASN B 99 1 5 HELIX 9 9 ASN B 160 LEU B 164 5 5 HELIX 10 10 PHE B 238 GLY B 252 1 15 HELIX 11 11 PRO B 292 ALA B 296 5 5 HELIX 12 12 THR B 318 GLU B 324 1 7 HELIX 13 13 TYR C 47 ALA C 55 1 9 HELIX 14 14 LYS C 95 ASN C 99 1 5 HELIX 15 15 ASN C 160 LEU C 164 5 5 HELIX 16 16 PHE C 238 GLY C 252 1 15 HELIX 17 17 GLY C 291 ASN C 295 5 5 HELIX 18 18 THR C 318 GLU C 324 1 7 SHEET 1 A 7 VAL A 58 GLY A 65 0 SHEET 2 A 7 GLU A 75 ILE A 84 -1 O ARG A 77 N ASN A 63 SHEET 3 A 7 TYR A 90 ASN A 94 -1 O ILE A 92 N VAL A 83 SHEET 4 A 7 LEU A 127 LYS A 131 -1 O LEU A 130 N ILE A 91 SHEET 5 A 7 VAL A 113 ASP A 122 -1 N LEU A 117 O LYS A 131 SHEET 6 A 7 GLN A 103 ALA A 107 -1 N VAL A 106 O PHE A 114 SHEET 7 A 7 VAL A 58 GLY A 65 -1 N ARG A 64 O GLN A 103 SHEET 1 B 7 VAL A 154 GLY A 159 0 SHEET 2 B 7 THR A 167 ARG A 178 -1 O GLY A 171 N VAL A 155 SHEET 3 B 7 PHE A 189 THR A 192 -1 O GLN A 191 N SER A 174 SHEET 4 B 7 GLY A 233 PRO A 237 -1 O ALA A 235 N LEU A 190 SHEET 5 B 7 LEU A 212 SER A 219 -1 N THR A 217 O PHE A 234 SHEET 6 B 7 ALA A 204 ASN A 207 -1 N LEU A 205 O MET A 213 SHEET 7 B 7 VAL A 154 GLY A 159 -1 N ILE A 158 O ALA A 204 SHEET 1 C 2 GLY A 257 TYR A 258 0 SHEET 2 C 2 GLN A 349 GLU A 350 -1 O GLN A 349 N TYR A 258 SHEET 1 D 2 ILE A 261 GLY A 262 0 SHEET 2 D 2 TRP D 409 PHE D 410 -1 O PHE D 410 N ILE A 261 SHEET 1 E 2 VAL A 330 ILE A 331 0 SHEET 2 E 2 VAL A 346 THR A 347 -1 O VAL A 346 N ILE A 331 SHEET 1 F 7 VAL B 58 GLY B 65 0 SHEET 2 F 7 GLU B 75 ILE B 84 -1 O GLU B 75 N GLY B 65 SHEET 3 F 7 TYR B 90 ASN B 94 -1 O ILE B 92 N VAL B 83 SHEET 4 F 7 LEU B 127 LYS B 131 -1 O LEU B 130 N ILE B 91 SHEET 5 F 7 VAL B 113 ASP B 122 -1 N ASP B 122 O LEU B 127 SHEET 6 F 7 GLN B 103 ALA B 107 -1 N VAL B 106 O PHE B 114 SHEET 7 F 7 VAL B 58 GLY B 65 -1 N TYR B 62 O ILE B 105 SHEET 1 G 7 VAL B 154 GLY B 159 0 SHEET 2 G 7 THR B 167 ARG B 178 -1 O THR B 169 N ALA B 157 SHEET 3 G 7 PHE B 189 THR B 192 -1 O GLN B 191 N SER B 174 SHEET 4 G 7 GLY B 233 PRO B 237 -1 O ALA B 235 N LEU B 190 SHEET 5 G 7 LEU B 212 SER B 219 -1 N ILE B 215 O ILE B 236 SHEET 6 G 7 ALA B 204 ASN B 207 -1 N LEU B 205 O MET B 213 SHEET 7 G 7 VAL B 154 GLY B 159 -1 N ILE B 158 O ALA B 204 SHEET 1 H 2 GLY B 257 TYR B 258 0 SHEET 2 H 2 GLN B 349 GLU B 350 -1 O GLN B 349 N TYR B 258 SHEET 1 I 2 VAL B 330 ILE B 331 0 SHEET 2 I 2 VAL B 346 THR B 347 -1 O VAL B 346 N ILE B 331 SHEET 1 J 7 VAL C 58 GLY C 65 0 SHEET 2 J 7 GLU C 75 ILE C 84 -1 O GLY C 82 N VAL C 59 SHEET 3 J 7 TYR C 90 ASN C 94 -1 O ILE C 92 N VAL C 83 SHEET 4 J 7 LEU C 127 LYS C 131 -1 O LEU C 130 N ILE C 91 SHEET 5 J 7 VAL C 113 ASP C 122 -1 N LEU C 117 O LYS C 131 SHEET 6 J 7 GLN C 103 ALA C 107 -1 N ILE C 104 O ALA C 116 SHEET 7 J 7 VAL C 58 GLY C 65 -1 N ARG C 64 O GLN C 103 SHEET 1 K 7 VAL C 154 GLY C 159 0 SHEET 2 K 7 THR C 167 ARG C 178 -1 O GLY C 171 N VAL C 155 SHEET 3 K 7 PHE C 189 THR C 192 -1 O GLN C 191 N SER C 174 SHEET 4 K 7 GLY C 233 PRO C 237 -1 O ALA C 235 N LEU C 190 SHEET 5 K 7 LEU C 212 SER C 219 -1 N THR C 217 O PHE C 234 SHEET 6 K 7 ALA C 204 ASN C 207 -1 N LEU C 205 O MET C 213 SHEET 7 K 7 VAL C 154 GLY C 159 -1 N LEU C 156 O VAL C 206 SHEET 1 L 2 GLY C 257 TYR C 258 0 SHEET 2 L 2 GLN C 349 GLU C 350 -1 O GLN C 349 N TYR C 258 SHEET 1 M 2 ILE C 261 GLY C 262 0 SHEET 2 M 2 TRP F 409 PHE F 410 -1 O PHE F 410 N ILE C 261 SHEET 1 N 2 VAL C 330 ILE C 331 0 SHEET 2 N 2 VAL C 346 THR C 347 -1 O VAL C 346 N ILE C 331 CRYST1 205.800 142.700 41.100 90.00 90.68 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004859 0.000000 0.000058 0.00000 SCALE2 0.000000 0.007008 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024333 0.00000 MASTER 447 0 0 18 58 0 0 6 0 0 0 78 END