HEADER IMMUNE SYSTEM 28-AUG-07 2R32 TITLE CRYSTAL STRUCTURE OF HUMAN GITRL VARIANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: GCN4-PII/TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 18 COMPND 3 FUSION PROTEIN; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: TNF HOMOLOGY DOMAIN; COMPND 6 SYNONYM: GLUCOCORTICOID-INDUCED TNF-RELATED LIGAND, HGITRL, COMPND 7 ACTIVATION-INDUCIBLE TNF-RELATED LIGAND, AITRL; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE, HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST, HUMAN; SOURCE 4 ORGANISM_TAXID: 4932,9606; SOURCE 5 STRAIN: ,; SOURCE 6 GENE: TNFSF18, AITRL, GITRL, TL6; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: ROSETTA (DE3) PLYSS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-14B KEYWDS GITRL, GLUCOCORTICOID-INDUCED TNF RECEPTOR LIGAND, CYTOKINE, KEYWDS 2 GLYCOPROTEIN, MEMBRANE, SIGNAL-ANCHOR, TRANSMEMBRANE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR K.CHATTOPADHYAY,U.A.RAMAGOPAL,S.G.NATHENSON,S.C.ALMO REVDAT 3 25-OCT-17 2R32 1 REMARK REVDAT 2 30-DEC-08 2R32 1 JRNL VERSN REVDAT 1 20-NOV-07 2R32 0 JRNL AUTH K.CHATTOPADHYAY,U.A.RAMAGOPAL,A.MUKHOPADHAYA, JRNL AUTH 2 V.N.MALASHKEVICH,T.P.DILORENZO,M.BRENOWITZ,S.G.NATHENSON, JRNL AUTH 3 S.C.ALMO JRNL TITL ASSEMBLY AND STRUCTURAL PROPERTIES OF GLUCOCORTICOID-INDUCED JRNL TITL 2 TNF RECEPTOR LIGAND: IMPLICATIONS FOR FUNCTION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 104 19452 2007 JRNL REFN ISSN 0027-8424 JRNL PMID 18040044 JRNL DOI 10.1073/PNAS.0709264104 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 11656 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 554 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 813 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.54 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 47 REMARK 3 BIN FREE R VALUE : 0.3240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1125 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 48 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.19000 REMARK 3 B22 (A**2) : -1.19000 REMARK 3 B33 (A**2) : 1.79000 REMARK 3 B12 (A**2) : -0.60000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.169 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.158 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.109 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.693 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1153 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1558 ; 1.534 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 136 ; 6.531 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 50 ;33.435 ;25.600 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 211 ;18.103 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ;22.244 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 175 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 831 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 454 ; 0.220 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 779 ; 0.326 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 94 ; 0.139 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 56 ; 0.203 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.225 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 722 ; 4.537 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1130 ; 5.946 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 499 ; 4.736 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 428 ; 6.254 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2R32 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-SEP-07. REMARK 100 THE DEPOSITION ID IS D_1000044362. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.072 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11656 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.49100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2Q1M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M AMMONIUM SULPHATE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.60950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 17.67240 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 37.98267 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 30.60950 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 17.67240 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 37.98267 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 30.60950 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 17.67240 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 37.98267 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 35.34481 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 75.96533 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 35.34481 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 75.96533 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 35.34481 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 75.96533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A TRIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6800 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -30.60950 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -53.01721 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 30.60950 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -53.01721 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 12 REMARK 465 SER A 13 REMARK 465 HIS A 14 REMARK 465 MET A 15 REMARK 465 GLY A 16 REMARK 465 GLY A 17 REMARK 465 SER A 18 REMARK 465 ILE A 48 REMARK 465 GLY A 49 REMARK 465 GLU A 50 REMARK 465 ARG A 51 REMARK 465 GLU A 52 REMARK 465 THR A 53 REMARK 465 ALA A 54 REMARK 465 LYS A 55 REMARK 465 GLU A 56 REMARK 465 SER A 73 REMARK 465 SER A 74 REMARK 465 GLU A 75 REMARK 465 ALA A 105 REMARK 465 ASN A 106 REMARK 465 TYR A 107 REMARK 465 ASN A 108 REMARK 465 ASP A 109 REMARK 465 VAL A 110 REMARK 465 SER A 177 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 28 OE1 OE2 REMARK 470 GLU A 29 CG CD OE1 OE2 REMARK 470 LYS A 130 CD CE NZ REMARK 470 LYS A 132 CD CE NZ REMARK 470 LYS A 160 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 68 -122.75 -110.05 REMARK 500 TRP A 85 -0.39 83.27 REMARK 500 ASN A 120 -122.91 50.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Q1M RELATED DB: PDB REMARK 900 RELATED ID: 2R30 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE RMKQIEDKIEEILSKIYHIENEIARIKKLIGER REMARK 999 CORRESPONDS TO THE COILED-COIL PROTEIN STRUCTURAL MOTIF REMARK 999 OF GCN4-PII, AND IS FUSED AT THE N-TERMINUS OF TNF18_HUMAN. DBREF 2R32 A 52 177 UNP Q9UNG2 TNF18_HUMAN 52 177 SEQRES 1 A 166 GLY SER HIS MET GLY GLY SER ARG MET LYS GLN ILE GLU SEQRES 2 A 166 ASP LYS ILE GLU GLU ILE LEU SER LYS ILE TYR HIS ILE SEQRES 3 A 166 GLU ASN GLU ILE ALA ARG ILE LYS LYS LEU ILE GLY GLU SEQRES 4 A 166 ARG GLU THR ALA LYS GLU PRO CYS MET ALA LYS PHE GLY SEQRES 5 A 166 PRO LEU PRO SER LYS TRP GLN MET ALA SER SER GLU PRO SEQRES 6 A 166 PRO CYS VAL ASN LYS VAL SER ASP TRP LYS LEU GLU ILE SEQRES 7 A 166 LEU GLN ASN GLY LEU TYR LEU ILE TYR GLY GLN VAL ALA SEQRES 8 A 166 PRO ASN ALA ASN TYR ASN ASP VAL ALA PRO PHE GLU VAL SEQRES 9 A 166 ARG LEU TYR LYS ASN LYS ASP MET ILE GLN THR LEU THR SEQRES 10 A 166 ASN LYS SER LYS ILE GLN ASN VAL GLY GLY THR TYR GLU SEQRES 11 A 166 LEU HIS VAL GLY ASP THR ILE ASP LEU ILE PHE ASN SER SEQRES 12 A 166 GLU HIS GLN VAL LEU LYS ASN ASN THR TYR TRP GLY ILE SEQRES 13 A 166 ILE LEU LEU ALA ASN PRO GLN PHE ILE SER HET SO4 A 1 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 O4 S 2- FORMUL 3 HOH *48(H2 O) HELIX 1 1 ARG A 19 LEU A 47 1 29 HELIX 2 2 SER A 154 VAL A 158 5 5 SHEET 1 A 5 TRP A 69 ALA A 72 0 SHEET 2 A 5 MET A 59 PHE A 62 -1 N LYS A 61 O GLN A 70 SHEET 3 A 5 TYR A 164 ALA A 171 -1 O TRP A 165 N PHE A 62 SHEET 4 A 5 GLY A 93 VAL A 101 -1 N LEU A 94 O ALA A 171 SHEET 5 A 5 GLN A 134 ASN A 135 -1 O GLN A 134 N VAL A 101 SHEET 1 B 5 TRP A 69 ALA A 72 0 SHEET 2 B 5 MET A 59 PHE A 62 -1 N LYS A 61 O GLN A 70 SHEET 3 B 5 TYR A 164 ALA A 171 -1 O TRP A 165 N PHE A 62 SHEET 4 B 5 GLY A 93 VAL A 101 -1 N LEU A 94 O ALA A 171 SHEET 5 B 5 GLY A 138 LEU A 142 -1 O TYR A 140 N TYR A 95 SHEET 1 C 5 VAL A 79 SER A 83 0 SHEET 2 C 5 LYS A 86 ILE A 89 -1 O GLU A 88 N ASN A 80 SHEET 3 C 5 THR A 147 PHE A 152 -1 O ILE A 148 N LEU A 87 SHEET 4 C 5 VAL A 115 LYS A 119 -1 N TYR A 118 O ASP A 149 SHEET 5 C 5 ASP A 122 LEU A 127 -1 O ILE A 124 N LEU A 117 SSBOND 1 CYS A 58 CYS A 78 1555 1555 2.02 CISPEP 1 GLY A 63 PRO A 64 0 -0.93 CISPEP 2 LEU A 65 PRO A 66 0 15.27 SITE 1 AC1 4 HIS A 36 ASN A 39 ARG A 43 HOH A 183 CRYST1 61.219 61.219 113.948 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016335 0.009431 0.000000 0.00000 SCALE2 0.000000 0.018862 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008776 0.00000 MASTER 341 0 1 2 15 0 1 6 0 0 0 13 END