HEADER TRANSFERASE 11-JUL-07 2QKX TITLE N-ACETYL GLUCOSAMINE 1-PHOSPHATE URIDYLTRANSFERASE FROM MYCOBACTERIUM TITLE 2 TUBERCULOSIS COMPLEX WITH N-ACETYL GLUCOSAMINE 1-PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL PROTEIN GLMU; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: [INCLUDES: UDP-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE (EC COMPND 5 2.7.7.23) (N-ACETYLGLUCOSAMINE-1-PHOSPHATE URIDYLTRANSFERASE); COMPND 6 GLUCOSAMINE-1-PHOSPHATE N-ACETYLTRANSFERASE (EC 2.3.1.157)]; COMPND 7 EC: 2.3.1.157; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 STRAIN: H37RV; SOURCE 4 ATCC: 25618; SOURCE 5 GENE: GLMU, RV1018C, MT1046; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PDEST17 KEYWDS ROSSMANN, BETA-HELIX, SUBSTRATE COMPLEX, STRUCTURAL GENOMICS, TB KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, TBSGC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.ZHANG,C.J.SQUIRE,E.N.BAKER,TB STRUCTURAL GENOMICS CONSORTIUM AUTHOR 2 (TBSGC) REVDAT 5 29-JUL-20 2QKX 1 COMPND REMARK SEQADV HETNAM REVDAT 5 2 1 SITE ATOM REVDAT 4 13-JUL-11 2QKX 1 VERSN REVDAT 3 10-MAR-09 2QKX 1 JRNL REVDAT 2 24-FEB-09 2QKX 1 VERSN REVDAT 1 15-JUL-08 2QKX 0 JRNL AUTH Z.ZHANG,E.M.BULLOCH,R.D.BUNKER,E.N.BAKER,C.J.SQUIRE JRNL TITL STRUCTURE AND FUNCTION OF GLMU FROM MYCOBACTERIUM JRNL TITL 2 TUBERCULOSIS. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 65 275 2009 JRNL REFN ISSN 0907-4449 JRNL PMID 19237750 JRNL DOI 10.1107/S0907444909001036 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0037 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.42 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 12588 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 651 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 910 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2750 REMARK 3 BIN FREE R VALUE SET COUNT : 43 REMARK 3 BIN FREE R VALUE : 0.4000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2795 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 19 REMARK 3 SOLVENT ATOMS : 39 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.65000 REMARK 3 B22 (A**2) : -0.65000 REMARK 3 B33 (A**2) : 0.97000 REMARK 3 B12 (A**2) : -0.32000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.847 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.334 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.257 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 26.785 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.936 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2852 ; 0.016 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3907 ; 1.673 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 387 ; 7.136 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 103 ;37.028 ;24.078 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 421 ;16.716 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;19.322 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 495 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2119 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1227 ; 0.238 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1910 ; 0.315 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 113 ; 0.140 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 51 ; 0.184 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.211 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1940 ; 0.631 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3081 ; 1.140 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 971 ; 1.611 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 826 ; 2.599 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 389 REMARK 3 ORIGIN FOR THE GROUP (A): 29.8397 -14.4516 14.9037 REMARK 3 T TENSOR REMARK 3 T11: -0.0096 T22: 0.0153 REMARK 3 T33: 0.1409 T12: 0.0212 REMARK 3 T13: 0.0351 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 0.8554 L22: 1.4863 REMARK 3 L33: 2.3796 L12: -0.0067 REMARK 3 L13: -0.3531 L23: 0.6775 REMARK 3 S TENSOR REMARK 3 S11: 0.0715 S12: -0.2161 S13: 0.2638 REMARK 3 S21: 0.2726 S22: -0.0629 S23: 0.1780 REMARK 3 S31: -0.3672 S32: -0.2825 S33: -0.0086 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2QKX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUL-07. REMARK 100 THE DEPOSITION ID IS D_1000043727. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-07 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC REMARK 200 OPTICS : OSMIC REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13239 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 42.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.15100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.62300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1HM9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM NITRATE, 20% PEG 3350, PH REMARK 280 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 47.15150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 27.22293 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 96.01367 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 47.15150 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 27.22293 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 96.01367 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 47.15150 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 27.22293 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 96.01367 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 47.15150 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 27.22293 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 96.01367 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 47.15150 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 27.22293 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 96.01367 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 47.15150 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 27.22293 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 96.01367 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 54.44586 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 192.02733 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 54.44586 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 192.02733 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 54.44586 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 192.02733 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 54.44586 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 192.02733 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 54.44586 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 192.02733 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 54.44586 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 192.02733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A TRIMER GENERATED BY THE 3-FOLD REMARK 300 AXIS: -X+Y,-X,Z AND -Y,X-Y,Z. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 47.15150 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -81.66879 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 94.30300 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 6 CG OD1 OD2 REMARK 470 LYS A 46 CG CD CE NZ REMARK 470 HIS A 58 CG ND1 CD2 CE1 NE2 REMARK 470 LEU A 87 CG CD1 CD2 REMARK 470 SER A 98 OG REMARK 470 ARG A 131 CZ NH1 NH2 REMARK 470 HIS A 159 ND1 CD2 CE1 NE2 REMARK 470 GLU A 176 CD OE1 OE2 REMARK 470 LEU A 199 CG CD1 CD2 REMARK 470 SER A 200 OG REMARK 470 ASN A 203 CB CG OD1 ND2 REMARK 470 GLN A 206 CD OE1 NE2 REMARK 470 ILE A 214 CD1 REMARK 470 ARG A 218 NE CZ NH1 NH2 REMARK 470 ARG A 295 NE CZ NH1 NH2 REMARK 470 ARG A 301 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 302 CB CYS A 302 SG -0.107 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 5 N - CA - C ANGL. DEV. = -16.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 31 103.69 -163.98 REMARK 500 ALA A 48 65.90 63.01 REMARK 500 HIS A 58 -74.27 -7.49 REMARK 500 PRO A 65 -36.69 -39.74 REMARK 500 LEU A 87 30.39 -94.11 REMARK 500 SER A 98 -9.49 -51.48 REMARK 500 ASP A 158 27.24 -67.95 REMARK 500 HIS A 159 18.88 50.76 REMARK 500 ALA A 163 163.26 178.77 REMARK 500 ASN A 202 92.61 -69.13 REMARK 500 ASN A 203 138.50 89.13 REMARK 500 GLN A 206 73.60 37.63 REMARK 500 ASP A 283 12.77 59.96 REMARK 500 THR A 296 123.65 -33.86 REMARK 500 ARG A 323 51.27 39.08 REMARK 500 SER A 328 60.25 39.90 REMARK 500 TYR A 386 39.12 38.54 REMARK 500 REMARK 500 REMARK: NULL DBREF 2QKX A 1 389 UNP P96382 GLMU_MYCTU 1 389 SEQADV 2QKX GLY A -1 UNP P96382 EXPRESSION TAG SEQADV 2QKX SER A 0 UNP P96382 EXPRESSION TAG SEQRES 1 A 391 GLY SER MET THR PHE PRO GLY ASP THR ALA VAL LEU VAL SEQRES 2 A 391 LEU ALA ALA GLY PRO GLY THR ARG MET ARG SER ASP THR SEQRES 3 A 391 PRO LYS VAL LEU HIS THR LEU ALA GLY ARG SER MET LEU SEQRES 4 A 391 SER HIS VAL LEU HIS ALA ILE ALA LYS LEU ALA PRO GLN SEQRES 5 A 391 ARG LEU ILE VAL VAL LEU GLY HIS ASP HIS GLN ARG ILE SEQRES 6 A 391 ALA PRO LEU VAL GLY GLU LEU ALA ASP THR LEU GLY ARG SEQRES 7 A 391 THR ILE ASP VAL ALA LEU GLN ASP ARG PRO LEU GLY THR SEQRES 8 A 391 GLY HIS ALA VAL LEU CYS GLY LEU SER ALA LEU PRO ASP SEQRES 9 A 391 ASP TYR ALA GLY ASN VAL VAL VAL THR SER GLY ASP THR SEQRES 10 A 391 PRO LEU LEU ASP ALA ASP THR LEU ALA ASP LEU ILE ALA SEQRES 11 A 391 THR HIS ARG ALA VAL SER ALA ALA VAL THR VAL LEU THR SEQRES 12 A 391 THR THR LEU ASP ASP PRO PHE GLY TYR GLY ARG ILE LEU SEQRES 13 A 391 ARG THR GLN ASP HIS GLU VAL MET ALA ILE VAL GLU GLN SEQRES 14 A 391 THR ASP ALA THR PRO SER GLN ARG GLU ILE ARG GLU VAL SEQRES 15 A 391 ASN ALA GLY VAL TYR ALA PHE ASP ILE ALA ALA LEU ARG SEQRES 16 A 391 SER ALA LEU SER ARG LEU SER SER ASN ASN ALA GLN GLN SEQRES 17 A 391 GLU LEU TYR LEU THR ASP VAL ILE ALA ILE LEU ARG SER SEQRES 18 A 391 ASP GLY GLN THR VAL HIS ALA SER HIS VAL ASP ASP SER SEQRES 19 A 391 ALA LEU VAL ALA GLY VAL ASN ASN ARG VAL GLN LEU ALA SEQRES 20 A 391 GLU LEU ALA SER GLU LEU ASN ARG ARG VAL VAL ALA ALA SEQRES 21 A 391 HIS GLN LEU ALA GLY VAL THR VAL VAL ASP PRO ALA THR SEQRES 22 A 391 THR TRP ILE ASP VAL ASP VAL THR ILE GLY ARG ASP THR SEQRES 23 A 391 VAL ILE HIS PRO GLY THR GLN LEU LEU GLY ARG THR GLN SEQRES 24 A 391 ILE GLY GLY ARG CYS VAL VAL GLY PRO ASP THR THR LEU SEQRES 25 A 391 THR ASP VAL ALA VAL GLY ASP GLY ALA SER VAL VAL ARG SEQRES 26 A 391 THR HIS GLY SER SER SER SER ILE GLY ASP GLY ALA ALA SEQRES 27 A 391 VAL GLY PRO PHE THR TYR LEU ARG PRO GLY THR ALA LEU SEQRES 28 A 391 GLY ALA ASP GLY LYS LEU GLY ALA PHE VAL GLU VAL LYS SEQRES 29 A 391 ASN SER THR ILE GLY THR GLY THR LYS VAL PRO HIS LEU SEQRES 30 A 391 THR TYR VAL GLY ASP ALA ASP ILE GLY GLU TYR SER ASN SEQRES 31 A 391 ILE HET GN1 A 401 19 HETNAM GN1 2-ACETAMIDO-2-DEOXY-1-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE HETSYN GN1 N-ACETYL-D-GLUCOSAMINE-1-PHOSPHATE FORMUL 2 GN1 C8 H16 N O9 P FORMUL 3 HOH *39(H2 O) HELIX 1 1 GLY A 17 ARG A 21 5 5 HELIX 2 2 PRO A 25 LEU A 28 5 4 HELIX 3 3 MET A 36 ALA A 48 1 13 HELIX 4 4 ASP A 59 LEU A 74 1 16 HELIX 5 5 GLY A 88 SER A 98 1 11 HELIX 6 6 ASP A 119 VAL A 133 1 15 HELIX 7 7 ASP A 188 ARG A 198 1 11 HELIX 8 8 ASP A 212 GLY A 221 1 10 HELIX 9 9 ASP A 231 ALA A 236 5 6 HELIX 10 10 ASN A 240 ALA A 262 1 23 HELIX 11 11 ASP A 268 ALA A 270 5 3 CISPEP 1 PRO A 4 GLY A 5 0 -25.79 CISPEP 2 ASN A 203 ALA A 204 0 -18.93 CISPEP 3 GLY A 305 PRO A 306 0 1.08 CISPEP 4 GLY A 338 PRO A 339 0 2.60 CRYST1 94.303 94.303 288.041 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010604 0.006122 0.000000 0.00000 SCALE2 0.000000 0.012245 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003472 0.00000 MASTER 421 0 1 11 0 0 0 6 0 0 0 31 END