HEADER OXIDOREDUCTASE 19-JAN-07 2OLN TITLE NIKD, AN UNUSUAL AMINO ACID OXIDASE ESSENTIAL FOR TITLE 2 NIKKOMYCIN BIOSYNTHESIS: CLOSED FORM AT 1.15 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: NIKD PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: CLOSED FORM SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES TENDAE; SOURCE 3 ORGANISM_TAXID: 1932; SOURCE 4 STRAIN: TU501; SOURCE 5 GENE: NIKD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PDV101 KEYWDS FLAVOPROTEIN, ROSSMANN FOLD, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR C.J.CARRELL,R.C.BRUCKNER,D.VENCI,G.ZHAO,M.S.JORNS, AUTHOR 2 F.S.MATHEWS REVDAT 3 24-FEB-09 2OLN 1 VERSN REVDAT 2 20-NOV-07 2OLN 1 JRNL REVDAT 1 31-JUL-07 2OLN 0 JRNL AUTH C.J.CARRELL,R.C.BRUCKNER,D.VENCI,G.ZHAO,M.S.JORNS, JRNL AUTH 2 F.S.MATHEWS JRNL TITL NIKD, AN UNUSUAL AMINO ACID OXIDASE ESSENTIAL FOR JRNL TITL 2 NIKKOMYCIN BIOSYNTHESIS: STRUCTURES OF CLOSED AND JRNL TITL 3 OPEN FORMS AT 1.15 AND 1.90 A RESOLUTION JRNL REF STRUCTURE V. 15 928 2007 JRNL REFN ISSN 0969-2126 JRNL PMID 17697998 JRNL DOI 10.1016/J.STR.2007.06.010 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 1.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.1 REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.124 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.123 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.149 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 8054 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 160511 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : 0.118 REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.117 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.142 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 6993 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 139427 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3024 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 63 REMARK 3 SOLVENT ATOMS : 508 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 3582.50 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 2901.00 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 2 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 32357 REMARK 3 NUMBER OF RESTRAINTS : 39283 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.017 REMARK 3 ANGLE DISTANCES (A) : NULL REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : NULL REMARK 3 ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : NULL REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH & HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2OLN COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JAN-07. REMARK 100 THE RCSB ID CODE IS RCSB041289. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.90000 REMARK 200 MONOCHROMATOR : GE(111) CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 160538 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.0 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.17 REMARK 200 COMPLETENESS FOR SHELL (%) : 46.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.20500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM ADA BUFFER, 28% PEG-1500, PH REMARK 280 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 39.12000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.80000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 39.12000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 47.80000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A9431 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ALA A 388 REMARK 465 LEU A 389 REMARK 465 LEU A 390 REMARK 465 GLU A 391 REMARK 465 HIS A 392 REMARK 465 HIS A 393 REMARK 465 HIS A 394 REMARK 465 HIS A 395 REMARK 465 HIS A 396 REMARK 465 HIS A 397 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 101 CD GLU A 101 OE1 0.070 REMARK 500 CYS A 204 CB CYS A 204 SG -0.101 REMARK 500 ALA A 353 N ALA A 353 CA 0.141 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 3 OE1 - CD - OE2 ANGL. DEV. = -8.1 DEGREES REMARK 500 ARG A 26 NH1 - CZ - NH2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ARG A 26 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 35 NE - CZ - NH1 ANGL. DEV. = 7.1 DEGREES REMARK 500 ARG A 35 NE - CZ - NH2 ANGL. DEV. = -4.9 DEGREES REMARK 500 GLU A 49 CB - CG - CD ANGL. DEV. = 25.2 DEGREES REMARK 500 ARG A 63 NE - CZ - NH1 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG A 73 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG A 82 NE - CZ - NH1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG A 82 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ASP A 96 CB - CG - OD1 ANGL. DEV. = 10.5 DEGREES REMARK 500 ASP A 96 CB - CG - OD2 ANGL. DEV. = -14.1 DEGREES REMARK 500 ARG A 117 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 128 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 128 NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 ARG A 137 CD - NE - CZ ANGL. DEV. = 13.4 DEGREES REMARK 500 ARG A 137 NE - CZ - NH1 ANGL. DEV. = 8.2 DEGREES REMARK 500 ARG A 171 NE - CZ - NH2 ANGL. DEV. = 5.6 DEGREES REMARK 500 TYR A 195 CG - CD2 - CE2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG A 196 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 218 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG A 272 CB - CG - CD ANGL. DEV. = 27.4 DEGREES REMARK 500 ARG A 272 CD - NE - CZ ANGL. DEV. = 45.9 DEGREES REMARK 500 ARG A 272 NH1 - CZ - NH2 ANGL. DEV. = -8.0 DEGREES REMARK 500 ARG A 272 NE - CZ - NH2 ANGL. DEV. = 5.1 DEGREES REMARK 500 HIS A 284 CG - ND1 - CE1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG A 294 CD - NE - CZ ANGL. DEV. = 19.5 DEGREES REMARK 500 ARG A 295 NE - CZ - NH2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG A 299 NE - CZ - NH1 ANGL. DEV. = -6.4 DEGREES REMARK 500 ARG A 299 NE - CZ - NH2 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG A 305 NE - CZ - NH1 ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG A 305 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 ASP A 306 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG A 317 CD - NE - CZ ANGL. DEV. = 12.6 DEGREES REMARK 500 ARG A 317 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 CYS A 321 CA - CB - SG ANGL. DEV. = 7.6 DEGREES REMARK 500 ARG A 331 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 PHE A 334 CB - CG - CD2 ANGL. DEV. = 4.8 DEGREES REMARK 500 TYR A 351 CA - CB - CG ANGL. DEV. = -12.7 DEGREES REMARK 500 TYR A 351 CB - CG - CD2 ANGL. DEV. = 4.0 DEGREES REMARK 500 VAL A 372 CG1 - CB - CG2 ANGL. DEV. = 11.0 DEGREES REMARK 500 VAL A 372 CA - CB - CG2 ANGL. DEV. = -9.7 DEGREES REMARK 500 ASP A 379 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 36 -121.89 -108.09 REMARK 500 ALA A 353 156.44 178.99 REMARK 500 ASP A 374 11.40 58.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A9363 DISTANCE = 5.51 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A9001 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 266 O REMARK 620 2 GLY A 268 O 105.9 REMARK 620 3 HOH A9297 O 88.9 100.9 REMARK 620 4 HOH A9145 O 163.6 89.5 82.5 REMARK 620 5 HOH A9133 O 81.8 163.6 93.5 84.8 REMARK 620 6 HOH A9061 O 87.7 80.5 176.6 100.7 85.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 9001 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 1001 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 6PC A 5001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2OLN RELATED DB: PDB REMARK 900 RELATED ID: 2OLO RELATED DB: PDB DBREF 2OLN A 1 389 UNP Q9X9P9 Q9X9P9_STRTE 1 389 SEQADV 2OLN LEU A 390 UNP Q9X9P9 EXPRESSION TAG SEQADV 2OLN GLU A 391 UNP Q9X9P9 EXPRESSION TAG SEQADV 2OLN HIS A 392 UNP Q9X9P9 EXPRESSION TAG SEQADV 2OLN HIS A 393 UNP Q9X9P9 EXPRESSION TAG SEQADV 2OLN HIS A 394 UNP Q9X9P9 EXPRESSION TAG SEQADV 2OLN HIS A 395 UNP Q9X9P9 EXPRESSION TAG SEQADV 2OLN HIS A 396 UNP Q9X9P9 EXPRESSION TAG SEQADV 2OLN HIS A 397 UNP Q9X9P9 EXPRESSION TAG SEQRES 1 A 397 MET THR GLU SER TYR ASP VAL VAL VAL VAL GLY GLY GLY SEQRES 2 A 397 PRO VAL GLY LEU ALA THR ALA TRP GLN VAL ALA GLU ARG SEQRES 3 A 397 GLY HIS ARG VAL LEU VAL LEU GLU ARG HIS THR PHE PHE SEQRES 4 A 397 ASN GLU ASN GLY GLY THR SER GLY ALA GLU ARG HIS TRP SEQRES 5 A 397 ARG LEU GLN TYR THR GLN GLU ASP LEU PHE ARG LEU THR SEQRES 6 A 397 LEU GLU THR LEU PRO LEU TRP ARG ALA LEU GLU SER ARG SEQRES 7 A 397 CYS GLU ARG ARG LEU ILE HIS GLU ILE GLY SER LEU TRP SEQRES 8 A 397 PHE GLY ASP THR ASP VAL VAL THR ASN GLU GLY GLN ILE SEQRES 9 A 397 SER GLY THR ALA ALA MET MET ASP LYS LEU SER VAL ARG SEQRES 10 A 397 TYR GLU TRP LEU LYS ALA THR ASP ILE GLU ARG ARG PHE SEQRES 11 A 397 GLY PHE ARG GLY LEU PRO ARG ASP TYR GLU GLY PHE LEU SEQRES 12 A 397 GLN PRO ASP GLY GLY THR ILE ASP VAL ARG GLY THR LEU SEQRES 13 A 397 ALA ALA LEU PHE THR LEU ALA GLN ALA ALA GLY ALA THR SEQRES 14 A 397 LEU ARG ALA GLY GLU THR VAL THR GLU LEU VAL PRO ASP SEQRES 15 A 397 ALA ASP GLY VAL SER VAL THR THR ASP ARG GLY THR TYR SEQRES 16 A 397 ARG ALA GLY LYS VAL VAL LEU ALA CYS GLY PRO TYR THR SEQRES 17 A 397 ASN ASP LEU LEU GLU PRO LEU GLY ALA ARG LEU ALA TYR SEQRES 18 A 397 SER VAL TYR GLU MET ALA ILE ALA ALA TYR ARG GLN ALA SEQRES 19 A 397 THR PRO VAL THR GLU ALA PRO PHE TRP PHE ALA PHE GLN SEQRES 20 A 397 GLN PRO THR PRO GLN ASP THR ASN LEU PHE TYR GLY PHE SEQRES 21 A 397 GLY HIS ASN PRO TRP ALA PRO GLY GLU PHE VAL ARG CYS SEQRES 22 A 397 GLY PRO ASP PHE GLU VAL ASP PRO LEU ASP HIS PRO SER SEQRES 23 A 397 ALA ALA THR GLY VAL ALA ASP ARG ARG GLN MET ASP ARG SEQRES 24 A 397 LEU SER GLY TRP LEU ARG ASP HIS LEU PRO THR VAL ASP SEQRES 25 A 397 PRO ASP PRO VAL ARG THR SER THR CYS LEU ALA VAL LEU SEQRES 26 A 397 PRO THR ASP PRO GLU ARG GLN PHE PHE LEU GLY THR ALA SEQRES 27 A 397 ARG ASP LEU MET THR HIS GLY GLU LYS LEU VAL VAL TYR SEQRES 28 A 397 GLY ALA GLY TRP ALA PHE LYS PHE VAL PRO LEU PHE GLY SEQRES 29 A 397 ARG ILE CYS ALA ASP LEU ALA VAL GLU ASP SER THR ALA SEQRES 30 A 397 TYR ASP ILE SER ARG LEU ALA PRO GLN SER ALA LEU LEU SEQRES 31 A 397 GLU HIS HIS HIS HIS HIS HIS HET NA A9001 1 HET FAD A1001 53 HET 6PC A5001 9 HETNAM NA SODIUM ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM 6PC PYRIDINE-2-CARBOXYLIC ACID HETSYN 6PC PICOLINIC ACID FORMUL 2 NA NA 1+ FORMUL 3 FAD C27 H33 N9 O15 P2 FORMUL 4 6PC C6 H5 N O2 FORMUL 5 HOH *508(H2 O) HELIX 1 1 GLY A 13 ARG A 26 1 14 HELIX 2 2 GLN A 58 GLU A 80 1 23 HELIX 3 3 GLN A 103 LEU A 114 1 12 HELIX 4 4 ALA A 123 GLY A 131 1 9 HELIX 5 5 VAL A 152 ALA A 166 1 15 HELIX 6 6 CYS A 204 PRO A 206 5 3 HELIX 7 7 TYR A 207 GLU A 213 1 7 HELIX 8 8 PRO A 214 GLY A 216 5 3 HELIX 9 9 HIS A 284 ALA A 288 5 5 HELIX 10 10 ASP A 293 LEU A 308 1 16 HELIX 11 11 HIS A 344 GLU A 346 5 3 HELIX 12 12 ALA A 356 LYS A 358 5 3 HELIX 13 13 PHE A 359 ASP A 374 1 16 HELIX 14 14 ILE A 380 ALA A 384 5 5 SHEET 1 A 6 THR A 169 ALA A 172 0 SHEET 2 A 6 VAL A 30 GLU A 34 1 N VAL A 32 O ARG A 171 SHEET 3 A 6 SER A 4 VAL A 10 1 N VAL A 9 O LEU A 31 SHEET 4 A 6 THR A 194 LEU A 202 1 O VAL A 201 N VAL A 10 SHEET 5 A 6 GLY A 185 THR A 190 -1 N VAL A 188 O TYR A 195 SHEET 6 A 6 VAL A 176 ASP A 182 -1 N ASP A 182 O GLY A 185 SHEET 1 B 6 THR A 169 ALA A 172 0 SHEET 2 B 6 VAL A 30 GLU A 34 1 N VAL A 32 O ARG A 171 SHEET 3 B 6 SER A 4 VAL A 10 1 N VAL A 9 O LEU A 31 SHEET 4 B 6 THR A 194 LEU A 202 1 O VAL A 201 N VAL A 10 SHEET 5 B 6 LEU A 348 ALA A 353 1 O VAL A 349 N LEU A 202 SHEET 6 B 6 PHE A 334 THR A 337 -1 N GLY A 336 O VAL A 350 SHEET 1 C 3 GLU A 49 TRP A 52 0 SHEET 2 C 3 GLY A 148 ASP A 151 -1 O ILE A 150 N ARG A 50 SHEET 3 C 3 ILE A 84 HIS A 85 -1 N HIS A 85 O THR A 149 SHEET 1 D 8 GLU A 119 LYS A 122 0 SHEET 2 D 8 GLU A 140 GLN A 144 -1 O GLY A 141 N LEU A 121 SHEET 3 D 8 SER A 89 GLY A 93 -1 N SER A 89 O GLN A 144 SHEET 4 D 8 PHE A 242 PHE A 246 1 O PHE A 246 N PHE A 92 SHEET 5 D 8 PHE A 257 GLY A 259 -1 O PHE A 257 N ALA A 245 SHEET 6 D 8 PHE A 270 PRO A 275 -1 O GLY A 274 N TYR A 258 SHEET 7 D 8 TYR A 221 ARG A 232 -1 N TYR A 231 O VAL A 271 SHEET 8 D 8 ARG A 317 PRO A 326 -1 O LEU A 325 N SER A 222 LINK O ALA A 266 NA NA A9001 1555 1555 2.37 LINK O GLY A 268 NA NA A9001 1555 1555 2.24 LINK NA NA A9001 O HOH A9297 1555 1555 2.26 LINK NA NA A9001 O HOH A9145 1555 1555 2.32 LINK NA NA A9001 O HOH A9133 1555 1555 2.36 LINK NA NA A9001 O HOH A9061 1555 1555 2.36 LINK SG CYS A 321 C8M FAD A1001 1555 1555 1.95 SITE 1 AC1 6 ALA A 266 GLY A 268 HOH A9061 HOH A9133 SITE 2 AC1 6 HOH A9145 HOH A9297 SITE 1 AC2 40 VAL A 10 GLY A 11 GLY A 13 PRO A 14 SITE 2 AC2 40 VAL A 15 LEU A 33 GLU A 34 ARG A 35 SITE 3 AC2 40 HIS A 36 ASN A 40 GLY A 44 THR A 45 SITE 4 AC2 40 ARG A 50 HIS A 51 GLU A 174 VAL A 176 SITE 5 AC2 40 ALA A 203 CYS A 204 GLY A 205 TYR A 207 SITE 6 AC2 40 TYR A 258 PHE A 260 CYS A 321 LEU A 322 SITE 7 AC2 40 TYR A 351 GLY A 354 TRP A 355 ALA A 356 SITE 8 AC2 40 PHE A 357 LYS A 358 6PC A5001 HOH A9006 SITE 9 AC2 40 HOH A9022 HOH A9027 HOH A9030 HOH A9050 SITE 10 AC2 40 HOH A9075 HOH A9087 HOH A9168 HOH A9469 SITE 1 AC3 7 HIS A 51 ARG A 53 GLU A 101 PHE A 242 SITE 2 AC3 7 TRP A 355 LYS A 358 FAD A1001 CRYST1 78.240 95.600 77.900 90.00 118.30 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012781 0.000000 0.006882 0.00000 SCALE2 0.000000 0.010460 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014580 0.00000 MASTER 348 0 3 14 23 0 14 6 0 0 0 31 END