HEADER STRUCTURAL PROTEIN 27-DEC-06 2ODV TITLE CRYSTAL STRUCTURE OF A FRAGMENT OF THE PLAKIN DOMAIN OF PLECTIN, CYS TITLE 2 TO ALA MUTANT. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLECTIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 300-530; COMPND 5 SYNONYM: HD1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLEC1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS PLAKIN DOMAIN, SPECTRIN REPEAT, CYTOSKELETON, HEMIDESMOSOMES, KEYWDS 2 EPIDERMOLYSIS BULLOSA, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.M.DE PEREDA REVDAT 6 20-OCT-21 2ODV 1 REMARK SEQADV REVDAT 5 13-JUL-11 2ODV 1 VERSN REVDAT 4 24-FEB-09 2ODV 1 VERSN REVDAT 3 15-MAY-07 2ODV 1 JRNL REVDAT 2 20-MAR-07 2ODV 1 TITLE REVDAT 1 13-MAR-07 2ODV 0 JRNL AUTH A.SONNENBERG,A.M.ROJAS,J.M.DE PEREDA JRNL TITL THE STRUCTURE OF A TANDEM PAIR OF SPECTRIN REPEATS OF JRNL TITL 2 PLECTIN REVEALS A MODULAR ORGANIZATION OF THE PLAKIN DOMAIN. JRNL REF J.MOL.BIOL. V. 368 1379 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17397861 JRNL DOI 10.1016/J.JMB.2007.02.090 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 14679 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 764 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1061 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2130 REMARK 3 BIN FREE R VALUE SET COUNT : 49 REMARK 3 BIN FREE R VALUE : 0.2910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1793 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 52 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 34.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.84000 REMARK 3 B22 (A**2) : 1.83000 REMARK 3 B33 (A**2) : -1.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.230 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.194 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.137 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.227 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1893 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2552 ; 1.545 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 227 ; 4.371 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 103 ;32.624 ;23.689 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 369 ;18.686 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;22.888 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 270 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1453 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 886 ; 0.221 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1303 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 69 ; 0.174 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 74 ; 0.211 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.214 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1161 ; 1.089 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1792 ; 1.593 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 836 ; 2.916 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 760 ; 4.434 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 303 A 331 REMARK 3 ORIGIN FOR THE GROUP (A): 26.9120 26.5940 -3.8070 REMARK 3 T TENSOR REMARK 3 T11: 0.3999 T22: -0.0734 REMARK 3 T33: 0.2121 T12: -0.1179 REMARK 3 T13: 0.0621 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 21.7198 L22: 16.6042 REMARK 3 L33: 34.9733 L12: -13.6823 REMARK 3 L13: 20.2722 L23: -18.4686 REMARK 3 S TENSOR REMARK 3 S11: -0.6606 S12: 0.2762 S13: 1.1818 REMARK 3 S21: 0.0795 S22: -0.4949 S23: -0.8794 REMARK 3 S31: -1.2900 S32: 0.9295 S33: 1.1554 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 333 A 422 REMARK 3 ORIGIN FOR THE GROUP (A): 27.6650 16.5290 4.9520 REMARK 3 T TENSOR REMARK 3 T11: 0.1704 T22: -0.1087 REMARK 3 T33: 0.1056 T12: -0.0027 REMARK 3 T13: 0.0287 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 2.6649 L22: 4.1895 REMARK 3 L33: 12.0561 L12: -2.8550 REMARK 3 L13: 4.9762 L23: -6.7118 REMARK 3 S TENSOR REMARK 3 S11: 0.2482 S12: -0.0657 S13: -0.0326 REMARK 3 S21: -0.5891 S22: 0.0274 S23: -0.0415 REMARK 3 S31: 0.5458 S32: -0.0984 S33: -0.2756 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 423 A 489 REMARK 3 ORIGIN FOR THE GROUP (A): 59.2410 -11.8580 37.1390 REMARK 3 T TENSOR REMARK 3 T11: 0.0487 T22: 0.0040 REMARK 3 T33: 0.1259 T12: 0.0271 REMARK 3 T13: -0.0071 T23: 0.0268 REMARK 3 L TENSOR REMARK 3 L11: 7.4568 L22: 5.2100 REMARK 3 L33: 3.0777 L12: -5.3594 REMARK 3 L13: 1.2030 L23: -0.6689 REMARK 3 S TENSOR REMARK 3 S11: -0.4227 S12: -1.0821 S13: -0.1909 REMARK 3 S21: 0.1746 S22: 0.5468 S23: -0.0770 REMARK 3 S31: 0.2579 S32: 0.0650 S33: -0.1241 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 490 A 520 REMARK 3 ORIGIN FOR THE GROUP (A): 64.6550 -7.0060 32.2100 REMARK 3 T TENSOR REMARK 3 T11: 0.1051 T22: -0.0269 REMARK 3 T33: 0.5027 T12: -0.0561 REMARK 3 T13: 0.0214 T23: -0.0399 REMARK 3 L TENSOR REMARK 3 L11: 16.3113 L22: 20.5060 REMARK 3 L33: 12.5668 L12: -16.7234 REMARK 3 L13: 11.5941 L23: -12.6904 REMARK 3 S TENSOR REMARK 3 S11: -0.3061 S12: -0.1784 S13: 1.2700 REMARK 3 S21: -0.3375 S22: -0.3428 S23: -1.7157 REMARK 3 S31: -0.0261 S32: 0.4030 S33: 0.6489 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2ODV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1000041011. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-OCT-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785, 0.9185 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15444 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 39.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 14.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 14.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CITRATE PHOSPHATE PH 4.6, 24% 1,2 REMARK 280 -PROPANEDIOL, 6% PEG 3000, 3% GLYCEROL, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 77.31000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 13.25500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 77.31000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 13.25500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS THE MONOMERIC MOLECULE AS REMARK 300 PRESENTED IN THE COORDINATES REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 296 REMARK 465 SER A 297 REMARK 465 HIS A 298 REMARK 465 MET A 299 REMARK 465 ARG A 300 REMARK 465 ALA A 301 REMARK 465 ASN A 302 REMARK 465 ARG A 332 REMARK 465 ALA A 521 REMARK 465 GLY A 522 REMARK 465 VAL A 523 REMARK 465 ALA A 524 REMARK 465 ALA A 525 REMARK 465 PRO A 526 REMARK 465 ALA A 527 REMARK 465 THR A 528 REMARK 465 GLN A 529 REMARK 465 VAL A 530 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 333 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 334 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 412 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGO A 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ODU RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A FRAGMENT OF THE PLAKIN DOMAIN OF PLECTIN DBREF 2ODV A 300 530 UNP Q6S383 Q6S383_HUMAN 300 530 SEQADV 2ODV GLY A 296 UNP Q6S383 CLONING ARTIFACT SEQADV 2ODV SER A 297 UNP Q6S383 CLONING ARTIFACT SEQADV 2ODV HIS A 298 UNP Q6S383 CLONING ARTIFACT SEQADV 2ODV MET A 299 UNP Q6S383 CLONING ARTIFACT SEQADV 2ODV ALA A 420 UNP Q6S383 CYS 420 ENGINEERED MUTATION SEQADV 2ODV ALA A 435 UNP Q6S383 CYS 435 ENGINEERED MUTATION SEQADV 2ODV LYS A 506 UNP Q6S383 GLU 506 ENGINEERED MUTATION SEQRES 1 A 235 GLY SER HIS MET ARG ALA ASN GLU LEU GLN LEU ARG TRP SEQRES 2 A 235 GLN GLU TYR ARG GLU LEU VAL LEU LEU LEU LEU GLN TRP SEQRES 3 A 235 MET ARG HIS HIS THR ALA ALA PHE GLU GLU ARG ARG PHE SEQRES 4 A 235 PRO SER SER PHE GLU GLU ILE GLU ILE LEU TRP SER GLN SEQRES 5 A 235 PHE LEU LYS PHE LYS GLU MET GLU LEU PRO ALA LYS GLU SEQRES 6 A 235 ALA ASP LYS ASN ARG SER LYS GLY ILE TYR GLN SER LEU SEQRES 7 A 235 GLU GLY ALA VAL GLN ALA GLY GLN LEU LYS VAL PRO PRO SEQRES 8 A 235 GLY TYR HIS PRO LEU ASP VAL GLU LYS GLU TRP GLY LYS SEQRES 9 A 235 LEU HIS VAL ALA ILE LEU GLU ARG GLU LYS GLN LEU ARG SEQRES 10 A 235 SER GLU PHE GLU ARG LEU GLU ALA LEU GLN ARG ILE VAL SEQRES 11 A 235 THR LYS LEU GLN MET GLU ALA GLY LEU ALA GLU GLU GLN SEQRES 12 A 235 LEU ASN GLN ALA ASP ALA LEU LEU GLN SER ASP VAL ARG SEQRES 13 A 235 LEU LEU ALA ALA GLY LYS VAL PRO GLN ARG ALA GLY GLU SEQRES 14 A 235 VAL GLU ARG ASP LEU ASP LYS ALA ASP SER MET ILE ARG SEQRES 15 A 235 LEU LEU PHE ASN ASP VAL GLN THR LEU LYS ASP GLY ARG SEQRES 16 A 235 HIS PRO GLN GLY GLU GLN MET TYR ARG ARG VAL TYR ARG SEQRES 17 A 235 LEU HIS LYS ARG LEU VAL ALA ILE ARG THR GLU TYR ASN SEQRES 18 A 235 LEU ARG LEU LYS ALA GLY VAL ALA ALA PRO ALA THR GLN SEQRES 19 A 235 VAL HET PGO A1001 5 HETNAM PGO S-1,2-PROPANEDIOL FORMUL 2 PGO C3 H8 O2 FORMUL 3 HOH *52(H2 O) HELIX 1 1 GLU A 303 GLU A 331 1 29 HELIX 2 2 SER A 337 GLU A 355 1 19 HELIX 3 3 GLU A 355 ALA A 379 1 25 HELIX 4 4 HIS A 389 LEU A 453 1 65 HELIX 5 5 ARG A 461 GLY A 489 1 29 HELIX 6 6 GLN A 493 LEU A 519 1 27 SITE 1 AC1 4 GLU A 416 LYS A 427 MET A 430 GLU A 431 CRYST1 154.620 26.510 58.090 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006467 0.000000 0.000000 0.00000 SCALE2 0.000000 0.037722 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017215 0.00000 MASTER 370 0 1 6 0 0 1 6 0 0 0 19 END