HEADER CHAPERONE 18-DEC-06 2OB9 TITLE STRUCTURE OF BACTERIOPHAGE HK97 TAIL ASSEMBLY CHAPERONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TAIL ASSEMBLY CHAPERONE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE HK97; SOURCE 3 ORGANISM_TAXID: 37554; SOURCE 4 GENE: HK97P121; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: P11 (MODIFIED PET VECTOR) KEYWDS BACTERIOPHAGE HK97, MORPHOGENESIS, TAIL ASSEMBLY CHAPERONE, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR T.E.MCGRATH,A.TUITE,D.BONA,V.SARIDAKIS,A.M.EDWARDS,K.MAXWELL, AUTHOR 2 N.Y.CHIRGADZE REVDAT 5 24-JUL-13 2OB9 1 JRNL REVDAT 4 10-APR-13 2OB9 1 JRNL REVDAT 3 13-JUL-11 2OB9 1 VERSN REVDAT 2 24-FEB-09 2OB9 1 VERSN REVDAT 1 18-DEC-07 2OB9 0 JRNL AUTH L.G.PELL,N.CUMBY,T.E.CLARK,A.TUITE,K.P.BATTAILE,A.M.EDWARDS, JRNL AUTH 2 N.Y.CHIRGADZE,A.R.DAVIDSON,K.L.MAXWELL JRNL TITL A CONSERVED SPIRAL STRUCTURE FOR HIGHLY DIVERGED PHAGE TAIL JRNL TITL 2 ASSEMBLY CHAPERONES. JRNL REF J.MOL.BIOL. V. 425 2436 2013 JRNL REFN ISSN 0022-2836 JRNL PMID 23542344 JRNL DOI 10.1016/J.JMB.2013.03.035 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 13384 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 710 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 899 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.68 REMARK 3 BIN R VALUE (WORKING SET) : 0.3020 REMARK 3 BIN FREE R VALUE SET COUNT : 49 REMARK 3 BIN FREE R VALUE : 0.4710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1695 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 53 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.44000 REMARK 3 B22 (A**2) : -2.44000 REMARK 3 B33 (A**2) : 4.88000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.288 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.249 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.185 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.190 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1744 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2366 ; 1.677 ; 1.952 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 213 ; 6.431 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 85 ;42.788 ;24.824 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 320 ;20.123 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;19.016 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 272 ; 0.145 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1298 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 781 ; 0.224 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1186 ; 0.299 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 58 ; 0.172 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 38 ; 0.174 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.145 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1101 ; 0.976 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1724 ; 1.434 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 749 ; 2.068 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 639 ; 3.017 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 115 REMARK 3 ORIGIN FOR THE GROUP (A): 7.8909 33.5193 21.0138 REMARK 3 T TENSOR REMARK 3 T11: -0.1141 T22: -0.1430 REMARK 3 T33: -0.1525 T12: 0.0112 REMARK 3 T13: 0.0334 T23: 0.0572 REMARK 3 L TENSOR REMARK 3 L11: 8.6179 L22: 3.1394 REMARK 3 L33: 0.3760 L12: -2.7498 REMARK 3 L13: -0.8409 L23: 0.6328 REMARK 3 S TENSOR REMARK 3 S11: 0.0827 S12: 0.2991 S13: -0.2410 REMARK 3 S21: -0.0630 S22: -0.1344 S23: 0.1660 REMARK 3 S31: 0.1094 S32: -0.0781 S33: 0.0516 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 118 REMARK 3 ORIGIN FOR THE GROUP (A): -20.7069 30.1121 20.3065 REMARK 3 T TENSOR REMARK 3 T11: -0.0518 T22: -0.0771 REMARK 3 T33: -0.1086 T12: 0.0178 REMARK 3 T13: 0.0260 T23: 0.0335 REMARK 3 L TENSOR REMARK 3 L11: 7.8849 L22: 5.2417 REMARK 3 L33: 0.4186 L12: 4.7598 REMARK 3 L13: 1.8096 L23: 1.1806 REMARK 3 S TENSOR REMARK 3 S11: -0.1823 S12: 0.1493 S13: 0.0365 REMARK 3 S21: -0.4417 S22: 0.1503 S23: 0.2354 REMARK 3 S31: 0.0699 S32: -0.1106 S33: 0.0320 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2OB9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-DEC-06. REMARK 100 THE RCSB ID CODE IS RCSB040918. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-AUG-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793460 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13384 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 36.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.40200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.120 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NH4(OAC), 0.1M NA HEPES PH 7.6, REMARK 280 20% PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 50.57000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.57000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 31.69100 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 50.57000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.57000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 31.69100 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 50.57000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 50.57000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 31.69100 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 50.57000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 50.57000 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 31.69100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC REMARK 300 UNIT WHICH CONSISTS OF 2 CHAIN(S). AUTHORS STATE THAT THE REMARK 300 BIOLOGICAL MOLECULE FOR THE PROTEIN IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 LYS A 49 REMARK 465 GLY A 50 REMARK 465 GLY A 51 REMARK 465 GLY A 52 REMARK 465 ASP A 53 REMARK 465 ASP A 54 REMARK 465 GLU A 55 REMARK 465 ASN A 116 REMARK 465 ALA A 117 REMARK 465 ASP A 118 REMARK 465 GLU A 119 REMARK 465 ALA A 120 REMARK 465 ARG A 121 REMARK 465 GLU A 122 REMARK 465 LYS A 123 REMARK 465 SER A 124 REMARK 465 GLN A 125 REMARK 465 PRO A 126 REMARK 465 PRO A 127 REMARK 465 ALA A 128 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 GLY B 50 REMARK 465 GLY B 51 REMARK 465 GLY B 52 REMARK 465 ASP B 53 REMARK 465 ASP B 54 REMARK 465 GLU B 55 REMARK 465 ASN B 56 REMARK 465 VAL B 57 REMARK 465 SER B 58 REMARK 465 VAL B 59 REMARK 465 SER B 60 REMARK 465 GLU B 61 REMARK 465 LYS B 62 REMARK 465 ALA B 63 REMARK 465 GLU B 119 REMARK 465 ALA B 120 REMARK 465 ARG B 121 REMARK 465 GLU B 122 REMARK 465 LYS B 123 REMARK 465 SER B 124 REMARK 465 GLN B 125 REMARK 465 PRO B 126 REMARK 465 PRO B 127 REMARK 465 ALA B 128 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASN A 56 CA ASN A 56 CB 0.180 REMARK 500 ASN A 56 CG ASN A 56 ND2 0.317 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 26 52.10 -109.93 REMARK 500 LEU A 42 -71.75 -44.52 REMARK 500 ALA B 14 -130.38 72.50 REMARK 500 TRP B 26 61.35 -116.12 REMARK 500 ASN B 115 75.68 -67.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ASN A 56 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 VAL A 23 24.8 L L OUTSIDE RANGE REMARK 500 VAL A 71 24.2 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 145 DISTANCE = 8.18 ANGSTROMS DBREF 2OB9 A 1 128 UNP Q9MCS6 Q9MCS6_BPHK7 1 128 DBREF 2OB9 B 1 128 UNP Q9MCS6 Q9MCS6_BPHK7 1 128 SEQADV 2OB9 GLY A -1 UNP Q9MCS6 EXPRESSION TAG SEQADV 2OB9 HIS A 0 UNP Q9MCS6 EXPRESSION TAG SEQADV 2OB9 GLY B -1 UNP Q9MCS6 EXPRESSION TAG SEQADV 2OB9 HIS B 0 UNP Q9MCS6 EXPRESSION TAG SEQRES 1 A 130 GLY HIS MSE SER GLN THR LEU LYS GLN LEU ALA MSE ALA SEQRES 2 A 130 LYS MSE ALA GLY PHE ARG HIS LYS THR VAL VAL VAL PRO SEQRES 3 A 130 GLU TRP GLU GLY VAL LYS VAL VAL LEU ARG GLU PRO SER SEQRES 4 A 130 GLY GLU ALA TRP LEU ARG TRP GLN GLU VAL VAL LYS GLY SEQRES 5 A 130 GLY GLY ASP ASP GLU ASN VAL SER VAL SER GLU LYS ALA SEQRES 6 A 130 HIS ARG ASN LEU CYS ALA ASP VAL VAL LEU PHE ILE ASP SEQRES 7 A 130 VAL LEU CYS ASP THR ASP LYS GLN PRO VAL PHE SER VAL SEQRES 8 A 130 ASP GLU GLU GLU GLN VAL ARG GLU ILE TYR GLY PRO VAL SEQRES 9 A 130 HIS SER ARG LEU LEU LYS GLN ALA LEU ASP LEU ILE ASN SEQRES 10 A 130 ASN ALA ASP GLU ALA ARG GLU LYS SER GLN PRO PRO ALA SEQRES 1 B 130 GLY HIS MSE SER GLN THR LEU LYS GLN LEU ALA MSE ALA SEQRES 2 B 130 LYS MSE ALA GLY PHE ARG HIS LYS THR VAL VAL VAL PRO SEQRES 3 B 130 GLU TRP GLU GLY VAL LYS VAL VAL LEU ARG GLU PRO SER SEQRES 4 B 130 GLY GLU ALA TRP LEU ARG TRP GLN GLU VAL VAL LYS GLY SEQRES 5 B 130 GLY GLY ASP ASP GLU ASN VAL SER VAL SER GLU LYS ALA SEQRES 6 B 130 HIS ARG ASN LEU CYS ALA ASP VAL VAL LEU PHE ILE ASP SEQRES 7 B 130 VAL LEU CYS ASP THR ASP LYS GLN PRO VAL PHE SER VAL SEQRES 8 B 130 ASP GLU GLU GLU GLN VAL ARG GLU ILE TYR GLY PRO VAL SEQRES 9 B 130 HIS SER ARG LEU LEU LYS GLN ALA LEU ASP LEU ILE ASN SEQRES 10 B 130 ASN ALA ASP GLU ALA ARG GLU LYS SER GLN PRO PRO ALA MODRES 2OB9 MSE A 10 MET SELENOMETHIONINE MODRES 2OB9 MSE A 13 MET SELENOMETHIONINE MODRES 2OB9 MSE B 1 MET SELENOMETHIONINE MODRES 2OB9 MSE B 10 MET SELENOMETHIONINE MODRES 2OB9 MSE B 13 MET SELENOMETHIONINE HET MSE A 10 8 HET MSE A 13 8 HET MSE B 1 8 HET MSE B 10 8 HET MSE B 13 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 3 HOH *53(H2 O) HELIX 1 1 GLN A 3 MSE A 10 1 8 HELIX 2 2 PRO A 24 GLU A 27 5 4 HELIX 3 3 SER A 37 VAL A 48 1 12 HELIX 4 4 SER A 58 VAL A 77 1 20 HELIX 5 5 SER A 88 ASP A 90 5 3 HELIX 6 6 GLU A 91 GLU A 97 1 7 HELIX 7 7 GLY A 100 ASP A 112 1 13 HELIX 8 8 MSE B 1 ALA B 11 1 11 HELIX 9 9 PRO B 24 GLU B 27 5 4 HELIX 10 10 SER B 37 LYS B 49 1 13 HELIX 11 11 HIS B 64 VAL B 77 1 14 HELIX 12 12 SER B 88 ASP B 90 5 3 HELIX 13 13 GLU B 91 TYR B 99 1 9 HELIX 14 14 GLY B 100 ASP B 112 1 13 SHEET 1 A 3 HIS A 18 VAL A 22 0 SHEET 2 A 3 LYS A 30 ARG A 34 -1 O LEU A 33 N LYS A 19 SHEET 3 A 3 LEU A 78 CYS A 79 -1 O CYS A 79 N VAL A 32 SHEET 1 B 3 HIS B 18 VAL B 22 0 SHEET 2 B 3 LYS B 30 ARG B 34 -1 O LEU B 33 N LYS B 19 SHEET 3 B 3 LEU B 78 CYS B 79 -1 O CYS B 79 N VAL B 32 LINK C ALA A 9 N MSE A 10 1555 1555 1.34 LINK C MSE A 10 N ALA A 11 1555 1555 1.34 LINK C LYS A 12 N MSE A 13 1555 1555 1.32 LINK C MSE A 13 N ALA A 14 1555 1555 1.34 LINK C MSE B 1 N SER B 2 1555 1555 1.33 LINK C ALA B 9 N MSE B 10 1555 1555 1.33 LINK C MSE B 10 N ALA B 11 1555 1555 1.33 LINK C LYS B 12 N MSE B 13 1555 1555 1.33 LINK C MSE B 13 N ALA B 14 1555 1555 1.32 CRYST1 101.140 101.140 63.382 90.00 90.00 90.00 I 4 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009887 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009887 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015777 0.00000 MASTER 440 0 5 14 6 0 0 6 0 0 0 20 END